Abstract
The title compound, C10H10N2O, known as Edaravone (MCI-186), was crystallized from methanol. The two independent molecules in the asymmetric unit are linked through an O—H⋯O hydrogen bond. One molecule adopts a ketone form, while the other adopts an enol form. In the crystal structure, molecules are linked through intermolecular N—H⋯O hydrogen bonds, forming chains running along the b axis.
Related literature
For background to the compound, see: Watanabe et al. (1994 ▶); The Edaravone Acute Infarction Study Group (2003 ▶). For bond-length data, see: Allen et al. (1987 ▶). ▶
Experimental
Crystal data
C10H10N2O
M r = 174.20
Monoclinic,
a = 10.336 (2) Å
b = 11.154 (2) Å
c = 15.863 (3) Å
β = 95.157 (3)°
V = 1821.4 (6) Å3
Z = 8
Mo Kα radiation
μ = 0.09 mm−1
T = 298 (2) K
0.23 × 0.23 × 0.20 mm
Data collection
Bruker SMART CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.981, T max = 0.983
10551 measured reflections
3923 independent reflections
2894 reflections with I > 2σ(I)
R int = 0.025
Refinement
R[F 2 > 2σ(F 2)] = 0.040
wR(F 2) = 0.106
S = 1.04
3923 reflections
243 parameters
2 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.17 e Å−3
Δρmin = −0.14 e Å−3
Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808028559/sg2259sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808028559/sg2259Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N2—H2A⋯N4i | 0.907 (9) | 1.904 (10) | 2.7999 (17) | 169.4 (17) |
| O2—H2B⋯O1 | 0.870 (9) | 1.618 (10) | 2.4813 (15) | 170.9 (19) |
Symmetry code: (i)
.
supplementary crystallographic information
Comment
Edaravone (5-methyl-2-phenyl-2H-pyrazol-3-ol, MCI-186) is a free-radical scavenger that was approved by the Ministry of Health, Labor, and Welfare of Japan in 2001, and is now widely used for the treatment of acute cerebral infarction (Watanabe et al.., 1994; The Edaravone Acute Infarction Study Group, 2003). We report in this paper the crystal structure of the compound, (I).
The compound consists of two independent molecules (Fig. 1), which are linked through an intramolecular O2—H2B···O1 hydrogen bond (Table 1). One molecule adopts a ketone form, while the other adopts an enol form. In the ketone molecule, the dihedral angle between the C1–C6 benzene ring and the N1/N2/C9/C8/C7 ring is 22.9 (2)°. In the enol molecule, the dihedral angle between the C11–C16 benzene ring and the N3/N4/C19/C18/C17 ring is 34.3 (2)°. In the compound, all the bond lengths are within normal ranges (Allen et al., 1987). The bond length of C17—O2 [1.325 (2) Å] is longer than that of C7—O1 [1.260 (2) Å], which is caused by the enol form.
In the crystal structure, molecules are linked through intermolecular N–H···O hydrogen bonds (Table 1), forming chains running along the b axis (Fig. 2).
Experimental
The crystal of the compound was recrystallized by edaravone in methanol.
Refinement
H2A and H2B were located in a difference Fourier map and refined isotropically, with N–H and O–H distances restrained to 0.90 (1) and 0.85 (1) Å, and with Uiso(H) set to 0.08 Å2. Other H atoms were constrained to idealized geometries, with C–H = 0.93–0.96 Å, and with Uiso(H) set to 1.2Ueq(C) and 1.5Ueq(methyl C).
Figures
Fig. 1.
The structure of (I) at the 30% probability level. Intramolecular hydrogen bonds are shown as dashed lines.
Fig. 2.
Molecular packing of (I), viewed along the a axis. Intermolecular hydrogen bonds are shown as dashed lines.
Crystal data
| C10H10N2O | F(000) = 736 |
| Mr = 174.20 | Dx = 1.271 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 3931 reflections |
| a = 10.336 (2) Å | θ = 2.3–29.0° |
| b = 11.154 (2) Å | µ = 0.09 mm−1 |
| c = 15.863 (3) Å | T = 298 K |
| β = 95.157 (3)° | Block, colorless |
| V = 1821.4 (6) Å3 | 0.23 × 0.23 × 0.20 mm |
| Z = 8 |
Data collection
| Bruker SMART CCD area-detector diffractometer | 3923 independent reflections |
| Radiation source: fine-focus sealed tube | 2894 reflections with I > 2σ(I) |
| graphite | Rint = 0.025 |
| ω scan | θmax = 27.0°, θmin = 2.2° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −13→11 |
| Tmin = 0.981, Tmax = 0.983 | k = −13→14 |
| 10551 measured reflections | l = −20→18 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.040 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.106 | w = 1/[σ2(Fo2) + (0.0428P)2 + 0.3053P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.04 | (Δ/σ)max < 0.001 |
| 3923 reflections | Δρmax = 0.17 e Å−3 |
| 243 parameters | Δρmin = −0.14 e Å−3 |
| 2 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0087 (12) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.76081 (11) | 0.23408 (9) | 0.09473 (8) | 0.0652 (3) | |
| O2 | 0.63865 (11) | 0.42520 (9) | 0.07652 (7) | 0.0577 (3) | |
| N1 | 0.80235 (11) | 0.03414 (9) | 0.07061 (8) | 0.0469 (3) | |
| N2 | 0.76341 (13) | −0.04917 (10) | 0.00921 (8) | 0.0516 (3) | |
| N3 | 0.69321 (11) | 0.62596 (9) | 0.06745 (7) | 0.0418 (3) | |
| N4 | 0.76998 (12) | 0.70070 (10) | 0.02382 (8) | 0.0490 (3) | |
| C1 | 0.91015 (13) | 0.01075 (12) | 0.12978 (9) | 0.0457 (3) | |
| C2 | 0.92942 (16) | 0.07840 (15) | 0.20276 (10) | 0.0603 (4) | |
| H2 | 0.8722 | 0.1399 | 0.2131 | 0.072* | |
| C3 | 1.03427 (19) | 0.05375 (19) | 0.26009 (12) | 0.0768 (5) | |
| H3 | 1.0481 | 0.0997 | 0.3090 | 0.092* | |
| C4 | 1.1181 (2) | −0.0372 (2) | 0.24600 (13) | 0.0814 (6) | |
| H4 | 1.1881 | −0.0536 | 0.2853 | 0.098* | |
| C5 | 1.09872 (17) | −0.10395 (18) | 0.17403 (14) | 0.0755 (5) | |
| H5 | 1.1557 | −0.1661 | 0.1647 | 0.091* | |
| C6 | 0.99550 (15) | −0.08041 (15) | 0.11475 (11) | 0.0597 (4) | |
| H6 | 0.9837 | −0.1255 | 0.0653 | 0.072* | |
| C7 | 0.73814 (14) | 0.14046 (12) | 0.05144 (10) | 0.0486 (4) | |
| C8 | 0.65398 (16) | 0.11675 (14) | −0.02083 (10) | 0.0566 (4) | |
| H8 | 0.5970 | 0.1713 | −0.0486 | 0.068* | |
| C9 | 0.66976 (15) | 0.00076 (14) | −0.04331 (10) | 0.0536 (4) | |
| C10 | 0.6047 (2) | −0.07170 (17) | −0.11335 (11) | 0.0760 (5) | |
| H10A | 0.6586 | −0.0744 | −0.1596 | 0.114* | |
| H10B | 0.5227 | −0.0359 | −0.1321 | 0.114* | |
| H10C | 0.5908 | −0.1517 | −0.0937 | 0.114* | |
| C11 | 0.61818 (14) | 0.67394 (12) | 0.12999 (8) | 0.0441 (3) | |
| C12 | 0.49765 (15) | 0.62664 (14) | 0.14196 (10) | 0.0545 (4) | |
| H12 | 0.4655 | 0.5611 | 0.1104 | 0.065* | |
| C13 | 0.42556 (18) | 0.67832 (19) | 0.20167 (12) | 0.0755 (6) | |
| H13 | 0.3450 | 0.6462 | 0.2108 | 0.091* | |
| C14 | 0.4708 (2) | 0.7760 (2) | 0.24752 (12) | 0.0860 (7) | |
| H14 | 0.4205 | 0.8110 | 0.2866 | 0.103* | |
| C15 | 0.5904 (2) | 0.82150 (17) | 0.23553 (11) | 0.0799 (6) | |
| H15 | 0.6213 | 0.8876 | 0.2669 | 0.096* | |
| C16 | 0.66614 (18) | 0.77067 (13) | 0.17737 (10) | 0.0584 (4) | |
| H16 | 0.7482 | 0.8012 | 0.1703 | 0.070* | |
| C17 | 0.70530 (13) | 0.51085 (11) | 0.04194 (9) | 0.0430 (3) | |
| C18 | 0.79096 (15) | 0.51055 (13) | −0.01882 (10) | 0.0526 (4) | |
| H18 | 0.8190 | 0.4445 | −0.0479 | 0.063* | |
| C19 | 0.82756 (15) | 0.62954 (13) | −0.02813 (10) | 0.0510 (4) | |
| C20 | 0.91583 (19) | 0.68181 (17) | −0.08846 (13) | 0.0794 (6) | |
| H20A | 0.9060 | 0.7674 | −0.0900 | 0.119* | |
| H20B | 0.8938 | 0.6496 | −0.1440 | 0.119* | |
| H20C | 1.0042 | 0.6619 | −0.0700 | 0.119* | |
| H2A | 0.7692 (17) | −0.1287 (9) | 0.0208 (11) | 0.080* | |
| H2B | 0.6823 (16) | 0.3585 (12) | 0.0773 (12) | 0.080* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0757 (7) | 0.0322 (5) | 0.0864 (8) | 0.0043 (5) | −0.0001 (6) | −0.0043 (5) |
| O2 | 0.0673 (7) | 0.0311 (5) | 0.0772 (7) | 0.0007 (5) | 0.0205 (6) | 0.0059 (5) |
| N1 | 0.0531 (7) | 0.0283 (6) | 0.0577 (7) | 0.0011 (5) | −0.0031 (6) | 0.0011 (5) |
| N2 | 0.0640 (8) | 0.0310 (6) | 0.0581 (7) | 0.0018 (5) | −0.0030 (6) | 0.0012 (5) |
| N3 | 0.0493 (6) | 0.0298 (6) | 0.0476 (6) | 0.0024 (5) | 0.0114 (5) | 0.0017 (5) |
| N4 | 0.0588 (8) | 0.0324 (6) | 0.0582 (7) | −0.0021 (5) | 0.0185 (6) | 0.0015 (5) |
| C1 | 0.0456 (8) | 0.0362 (7) | 0.0551 (8) | −0.0040 (6) | 0.0031 (6) | 0.0098 (6) |
| C2 | 0.0646 (10) | 0.0555 (10) | 0.0603 (10) | −0.0023 (8) | 0.0035 (8) | 0.0003 (8) |
| C3 | 0.0793 (13) | 0.0876 (14) | 0.0607 (11) | −0.0113 (11) | −0.0084 (9) | 0.0024 (10) |
| C4 | 0.0653 (12) | 0.1020 (16) | 0.0736 (12) | −0.0004 (11) | −0.0122 (10) | 0.0206 (12) |
| C5 | 0.0569 (10) | 0.0769 (12) | 0.0919 (14) | 0.0161 (9) | 0.0016 (10) | 0.0187 (11) |
| C6 | 0.0567 (9) | 0.0531 (9) | 0.0687 (10) | 0.0082 (7) | 0.0024 (8) | 0.0050 (8) |
| C7 | 0.0513 (8) | 0.0310 (7) | 0.0640 (9) | 0.0023 (6) | 0.0082 (7) | 0.0075 (7) |
| C8 | 0.0597 (9) | 0.0453 (9) | 0.0635 (10) | 0.0101 (7) | −0.0019 (8) | 0.0127 (7) |
| C9 | 0.0599 (9) | 0.0477 (9) | 0.0523 (8) | 0.0013 (7) | −0.0006 (7) | 0.0069 (7) |
| C10 | 0.0886 (13) | 0.0739 (12) | 0.0622 (10) | −0.0045 (10) | −0.0120 (9) | −0.0032 (9) |
| C11 | 0.0544 (8) | 0.0339 (7) | 0.0447 (7) | 0.0122 (6) | 0.0093 (6) | 0.0067 (6) |
| C12 | 0.0524 (9) | 0.0531 (9) | 0.0586 (9) | 0.0130 (7) | 0.0090 (7) | 0.0135 (7) |
| C13 | 0.0686 (11) | 0.0872 (14) | 0.0749 (12) | 0.0326 (10) | 0.0304 (9) | 0.0286 (11) |
| C14 | 0.1171 (18) | 0.0853 (15) | 0.0612 (11) | 0.0533 (13) | 0.0383 (12) | 0.0143 (11) |
| C15 | 0.1298 (18) | 0.0540 (11) | 0.0579 (10) | 0.0258 (11) | 0.0198 (11) | −0.0063 (8) |
| C16 | 0.0812 (11) | 0.0414 (8) | 0.0537 (9) | 0.0066 (8) | 0.0121 (8) | −0.0019 (7) |
| C17 | 0.0495 (8) | 0.0285 (6) | 0.0511 (7) | 0.0027 (6) | 0.0048 (6) | 0.0015 (6) |
| C18 | 0.0622 (9) | 0.0379 (8) | 0.0597 (9) | 0.0065 (7) | 0.0166 (7) | −0.0068 (7) |
| C19 | 0.0538 (8) | 0.0432 (8) | 0.0580 (9) | 0.0022 (6) | 0.0163 (7) | −0.0002 (7) |
| C20 | 0.0868 (13) | 0.0683 (12) | 0.0901 (13) | −0.0032 (10) | 0.0467 (11) | 0.0008 (10) |
Geometric parameters (Å, °)
| O1—C7 | 1.260 (2) | C8—C9 | 1.356 (2) |
| O2—C17 | 1.325 (2) | C8—H8 | 0.9300 |
| O2—H2B | 0.870 (9) | C9—C10 | 1.485 (2) |
| N1—C7 | 1.379 (2) | C10—H10A | 0.9600 |
| N1—N2 | 1.380 (2) | C10—H10B | 0.9600 |
| N1—C1 | 1.415 (2) | C10—H10C | 0.9600 |
| N2—C9 | 1.340 (2) | C11—C16 | 1.381 (2) |
| N2—H2A | 0.907 (9) | C11—C12 | 1.382 (2) |
| N3—C17 | 1.355 (2) | C12—C13 | 1.383 (2) |
| N3—N4 | 1.379 (2) | C12—H12 | 0.9300 |
| N3—C11 | 1.418 (2) | C13—C14 | 1.369 (3) |
| N4—C19 | 1.323 (2) | C13—H13 | 0.9300 |
| C1—C6 | 1.381 (2) | C14—C15 | 1.365 (3) |
| C1—C2 | 1.381 (2) | C14—H14 | 0.9300 |
| C2—C3 | 1.378 (2) | C15—C16 | 1.384 (2) |
| C2—H2 | 0.9300 | C15—H15 | 0.9300 |
| C3—C4 | 1.366 (3) | C16—H16 | 0.9300 |
| C3—H3 | 0.9300 | C17—C18 | 1.366 (2) |
| C4—C5 | 1.362 (3) | C18—C19 | 1.392 (2) |
| C4—H4 | 0.9300 | C18—H18 | 0.9300 |
| C5—C6 | 1.383 (2) | C19—C20 | 1.498 (2) |
| C5—H5 | 0.9300 | C20—H20A | 0.9600 |
| C6—H6 | 0.9300 | C20—H20B | 0.9600 |
| C7—C8 | 1.400 (2) | C20—H20C | 0.9600 |
| C17—O2—H2B | 109.5 (13) | C9—C10—H10B | 109.5 |
| C7—N1—N2 | 108.62 (11) | H10A—C10—H10B | 109.5 |
| C7—N1—C1 | 129.74 (12) | C9—C10—H10C | 109.5 |
| N2—N1—C1 | 120.42 (11) | H10A—C10—H10C | 109.5 |
| C9—N2—N1 | 107.91 (11) | H10B—C10—H10C | 109.5 |
| C9—N2—H2A | 124.3 (11) | C16—C11—C12 | 120.50 (14) |
| N1—N2—H2A | 120.4 (12) | C16—C11—N3 | 118.91 (13) |
| C17—N3—N4 | 110.49 (11) | C12—C11—N3 | 120.57 (13) |
| C17—N3—C11 | 129.60 (11) | C11—C12—C13 | 118.88 (17) |
| N4—N3—C11 | 119.90 (10) | C11—C12—H12 | 120.6 |
| C19—N4—N3 | 105.14 (11) | C13—C12—H12 | 120.6 |
| C6—C1—C2 | 120.05 (14) | C14—C13—C12 | 121.09 (19) |
| C6—C1—N1 | 119.90 (13) | C14—C13—H13 | 119.5 |
| C2—C1—N1 | 120.05 (13) | C12—C13—H13 | 119.5 |
| C3—C2—C1 | 119.32 (17) | C15—C14—C13 | 119.52 (17) |
| C3—C2—H2 | 120.3 | C15—C14—H14 | 120.2 |
| C1—C2—H2 | 120.3 | C13—C14—H14 | 120.2 |
| C4—C3—C2 | 120.86 (18) | C14—C15—C16 | 120.93 (19) |
| C4—C3—H3 | 119.6 | C14—C15—H15 | 119.5 |
| C2—C3—H3 | 119.6 | C16—C15—H15 | 119.5 |
| C5—C4—C3 | 119.69 (17) | C11—C16—C15 | 119.06 (18) |
| C5—C4—H4 | 120.2 | C11—C16—H16 | 120.5 |
| C3—C4—H4 | 120.2 | C15—C16—H16 | 120.5 |
| C4—C5—C6 | 120.84 (18) | O2—C17—N3 | 119.60 (12) |
| C4—C5—H5 | 119.6 | O2—C17—C18 | 133.19 (13) |
| C6—C5—H5 | 119.6 | N3—C17—C18 | 107.21 (12) |
| C1—C6—C5 | 119.23 (17) | C17—C18—C19 | 105.80 (12) |
| C1—C6—H6 | 120.4 | C17—C18—H18 | 127.1 |
| C5—C6—H6 | 120.4 | C19—C18—H18 | 127.1 |
| O1—C7—N1 | 122.01 (13) | N4—C19—C18 | 111.36 (13) |
| O1—C7—C8 | 132.37 (13) | N4—C19—C20 | 119.87 (13) |
| N1—C7—C8 | 105.62 (12) | C18—C19—C20 | 128.74 (14) |
| C9—C8—C7 | 108.35 (13) | C19—C20—H20A | 109.5 |
| C9—C8—H8 | 125.8 | C19—C20—H20B | 109.5 |
| C7—C8—H8 | 125.8 | H20A—C20—H20B | 109.5 |
| N2—C9—C8 | 109.29 (14) | C19—C20—H20C | 109.5 |
| N2—C9—C10 | 119.47 (14) | H20A—C20—H20C | 109.5 |
| C8—C9—C10 | 131.23 (15) | H20B—C20—H20C | 109.5 |
| C9—C10—H10A | 109.5 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2A···N4i | 0.91 (1) | 1.90 (1) | 2.7999 (17) | 169.(2) |
| O2—H2B···O1 | 0.87 (1) | 1.62 (1) | 2.4813 (15) | 171.(2) |
Symmetry codes: (i) x, y−1, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SG2259).
References
- Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
- Bruker (2002). SAINT and SMART Bruker AXS Inc., Madison, Wisconsin, USA.
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- The Edaravone Acute Infarction Study Group (2003). Cerebrovasc. Dis.15, 222–229. [DOI] [PubMed]
- Watanabe, T., Yuki, S., Egawa, M. & Nishi, H. (1994). J. Pharmacol. Exp. Ther.268, 1597–1604. [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808028559/sg2259sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808028559/sg2259Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


