Abstract
The title compound, C14H13N3O3·H2O, was prepared by the reaction of 4-methoxysalicylaldehyde and isonicotinohydrazide in ethanol. The Schiff base molecule is not planar and has an E configuration with respect to the methylidene unit. The dihedral angle between the benzene and pyridine rings is 36.8 (2)°. In the molecule there is an intramolecular O—H⋯N hydrogen bond involving the hydroxyl substituent and the N atom of the 2-hydroxy-4-methoxybenzylidene unit. In the crystal, the molecules are linked through intermolecular O—H⋯O, O—H⋯N and N—H⋯O hydrogen bonds, forming layers parallel to the bc plane.
Related literature
For bond-length data, see: Allen et al. (1987 ▶). For background on the biological properties of hydrazones, see: El-Tabl et al. (2008 ▶); Chen et al. (2008 ▶); Alvarez et al. (2008 ▶); Ventura & Martins (2008 ▶); Kalinowski et al. (2008 ▶). For related structures, see: Peng & Hou (2008 ▶); Shan et al. (2008 ▶); Fun et al. (2008 ▶); Yehye et al. (2008 ▶); Ejsmont et al. (2008 ▶); Han et al. (2006 ▶); Lu et al. (2008 ▶).
Experimental
Crystal data
C14H13N3O3·H2O
M r = 289.29
Monoclinic,
a = 7.299 (4) Å
b = 12.537 (6) Å
c = 14.808 (7) Å
β = 96.281 (8)°
V = 1346.9 (11) Å3
Z = 4
Mo Kα radiation
μ = 0.11 mm−1
T = 298 (2) K
0.23 × 0.23 × 0.22 mm
Data collection
Bruker SMART 1000 CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.976, T max = 0.977
7804 measured reflections
3041 independent reflections
2129 reflections with I > 2σ(I)
R int = 0.030
Refinement
R[F 2 > 2σ(F 2)] = 0.045
wR(F 2) = 0.112
S = 1.03
3041 reflections
201 parameters
4 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.18 e Å−3
Δρmin = −0.25 e Å−3
Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808029619/su2062sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808029619/su2062Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H1⋯N1 | 0.82 | 1.92 | 2.644 (2) | 146 |
| O4—H4B⋯O2i | 0.853 (9) | 2.072 (10) | 2.924 (2) | 176 (2) |
| O4—H4A⋯N3ii | 0.861 (9) | 1.971 (10) | 2.832 (2) | 178 (2) |
| N2—H2⋯O4iii | 0.903 (9) | 2.024 (11) | 2.915 (2) | 169 (2) |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
The corresponding author gratefully acknowledges Changsha University of Science and Technology for research grants.
supplementary crystallographic information
Comment
Hydrazones derived from the reactions of aldehydes with hydrazides show potential biological properties (El-Tabl et al., 2008; Chen et al., 2008; Alvarez et al., 2008; Ventura & Martins, 2008; Kalinowski et al., 2008). In the last few years, a large number of hydrazones have been reported (Peng & Hou, 2008; Shan et al., 2008; Fun et al., 2008; Yehye et al., 2008; Ejsmont et al., 2008). As a continuous study, the crystal structure of the title compound, (I), is reported in this paper.
The molecular structure of compound (I) is illustrated in Fig. 1. It consists of a Schiff base molecule and a water molecule of crystallization. The C7═N1 bond length of 1.276 (2) Å indicates a typical C═N double bond. The Schiff base molecule has an E configuration with respect to the methylidene unit (C7═N1), as observed in similar compounds (Han et al., 2006; Lu et al., 2008). In the molecule there is an intramolecular O-H···N hydrogen bond involving the hydroxyl substituent and the N-atom of the 2-hydroxy-4-methoxybenzylidene moiety (Table 1). The dihedral angle between the benzene and pyridine rings is 36.8 (2)°, indicating the molecule is not planar. The bond lengths are in normal ranges (Allen et al., 1987).
In the crystal structure, symmetry related molecules are linked through intermolecular O—H···O, O—H···N and N—H···O hydrogen bonds (Table 1), forming layers parallel to the bc plane (Fig. 2).
Experimental
4-Methoxysalicylaldehyde (0.152 g, 1 mmol) was dissolved in 95% ethanol (50 ml), then isonicotinohydrazide (0.137 g, 1 mmol) was added slowly to the solution, and the mixture was heated at reflux with continuous stirring for 1 h. The solution was cooled to room temperature, yielding colorless crystallites. Recrystallization from a 95% ethanol yielded block-like single crytals of compound (I).
Refinement
H-atoms H2, H4A and H4B were located in a difference Fourier map and refined isotropically, with N—H, O—H and H···H distances restrained to 0.90 (1), 0.85 (1) and 1.37 (2) Å, respectively, and with Uiso(H) set at 0.08 Å2. The other H atoms were placed in calculated positions and treated as riding atoms with C—H = 0.93 - 0.96 Å, O—H = 0.82 Å, and i>Uiso(H) = 1.2Ueq(C) and 1.5Ueq(O1 and C14).
Figures
Fig. 1.
The molecular structure of compound (I), with 30% probability displacement ellipsoids for non-H atoms.
Fig. 2.
The crystal packing diagram of compound (I), viewed along the a axis. Hydrogen bonds are shown as dashed lines.
Crystal data
| C14H13N3O3·H2O | F(000) = 608 |
| Mr = 289.29 | Dx = 1.427 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 1237 reflections |
| a = 7.299 (4) Å | θ = 2.4–24.5° |
| b = 12.537 (6) Å | µ = 0.11 mm−1 |
| c = 14.808 (7) Å | T = 298 K |
| β = 96.281 (8)° | Block, colorless |
| V = 1346.9 (11) Å3 | 0.23 × 0.23 × 0.22 mm |
| Z = 4 |
Data collection
| Bruker SMART 1000 CCD area-detector diffractometer | 3041 independent reflections |
| Radiation source: fine-focus sealed tube | 2129 reflections with I > 2σ(I) |
| graphite | Rint = 0.030 |
| ω scans | θmax = 27.5°, θmin = 2.1° |
| Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −9→9 |
| Tmin = 0.976, Tmax = 0.977 | k = −16→15 |
| 7804 measured reflections | l = −14→19 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.03 | w = 1/[σ2(Fo2) + (0.0459P)2 + 0.2867P] where P = (Fo2 + 2Fc2)/3 |
| 3041 reflections | (Δ/σ)max < 0.001 |
| 201 parameters | Δρmax = 0.18 e Å−3 |
| 4 restraints | Δρmin = −0.25 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.1869 (2) | 0.17985 (9) | 1.00835 (8) | 0.0519 (4) | |
| H1 | 0.2127 | 0.1524 | 0.9611 | 0.078* | |
| O2 | 0.3338 (2) | 0.13791 (9) | 0.75220 (8) | 0.0490 (4) | |
| O3 | 0.07206 (17) | 0.08252 (9) | 1.30718 (7) | 0.0407 (3) | |
| O4 | 0.3910 (2) | 0.75061 (10) | 0.34205 (9) | 0.0532 (4) | |
| N1 | 0.29393 (19) | 0.02521 (11) | 0.90464 (9) | 0.0348 (3) | |
| N2 | 0.3324 (2) | −0.02124 (11) | 0.82441 (9) | 0.0339 (3) | |
| N3 | 0.3613 (2) | −0.13153 (13) | 0.50292 (10) | 0.0496 (4) | |
| C1 | 0.2257 (2) | −0.00223 (12) | 1.05635 (10) | 0.0307 (4) | |
| C2 | 0.1816 (2) | 0.10410 (13) | 1.07253 (10) | 0.0324 (4) | |
| C3 | 0.1288 (2) | 0.13524 (13) | 1.15565 (10) | 0.0342 (4) | |
| H3 | 0.0991 | 0.2061 | 1.1657 | 0.041* | |
| C4 | 0.1205 (2) | 0.06050 (13) | 1.22317 (10) | 0.0312 (4) | |
| C5 | 0.1644 (2) | −0.04517 (13) | 1.20894 (11) | 0.0370 (4) | |
| H5 | 0.1592 | −0.0953 | 1.2549 | 0.044* | |
| C6 | 0.2154 (2) | −0.07474 (13) | 1.12659 (11) | 0.0382 (4) | |
| H6 | 0.2442 | −0.1458 | 1.1172 | 0.046* | |
| C7 | 0.2761 (2) | −0.03892 (14) | 0.97002 (11) | 0.0355 (4) | |
| H7 | 0.2962 | −0.1114 | 0.9618 | 0.043* | |
| C8 | 0.3435 (2) | 0.04041 (13) | 0.75139 (10) | 0.0335 (4) | |
| C9 | 0.3600 (2) | −0.01964 (12) | 0.66533 (10) | 0.0317 (4) | |
| C10 | 0.2673 (3) | 0.01868 (15) | 0.58540 (11) | 0.0417 (4) | |
| H10 | 0.2037 | 0.0830 | 0.5847 | 0.050* | |
| C11 | 0.2709 (3) | −0.03991 (16) | 0.50692 (12) | 0.0501 (5) | |
| H11 | 0.2064 | −0.0139 | 0.4538 | 0.060* | |
| C12 | 0.4556 (3) | −0.16551 (15) | 0.57962 (12) | 0.0442 (5) | |
| H12 | 0.5238 | −0.2280 | 0.5776 | 0.053* | |
| C13 | 0.4581 (2) | −0.11375 (13) | 0.66161 (11) | 0.0358 (4) | |
| H13 | 0.5244 | −0.1414 | 0.7136 | 0.043* | |
| C14 | 0.0200 (3) | 0.18921 (14) | 1.32548 (12) | 0.0460 (5) | |
| H14A | 0.1199 | 0.2366 | 1.3168 | 0.069* | |
| H14B | −0.0087 | 0.1943 | 1.3871 | 0.069* | |
| H14C | −0.0864 | 0.2086 | 1.2849 | 0.069* | |
| H2 | 0.342 (3) | −0.0930 (8) | 0.8225 (16) | 0.080* | |
| H4A | 0.380 (3) | 0.7860 (16) | 0.3910 (10) | 0.080* | |
| H4B | 0.476 (2) | 0.7815 (17) | 0.3165 (13) | 0.080* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0907 (11) | 0.0363 (7) | 0.0306 (7) | −0.0014 (7) | 0.0150 (7) | 0.0072 (5) |
| O2 | 0.0739 (10) | 0.0350 (7) | 0.0413 (7) | 0.0045 (6) | 0.0206 (6) | 0.0002 (5) |
| O3 | 0.0562 (8) | 0.0416 (7) | 0.0263 (6) | 0.0017 (6) | 0.0139 (5) | −0.0029 (5) |
| O4 | 0.0814 (11) | 0.0405 (8) | 0.0406 (8) | −0.0106 (7) | 0.0193 (7) | −0.0080 (6) |
| N1 | 0.0376 (8) | 0.0437 (8) | 0.0241 (7) | −0.0035 (6) | 0.0080 (6) | −0.0041 (6) |
| N2 | 0.0423 (8) | 0.0373 (8) | 0.0234 (7) | −0.0013 (6) | 0.0093 (6) | −0.0038 (6) |
| N3 | 0.0564 (11) | 0.0604 (11) | 0.0340 (9) | −0.0128 (8) | 0.0148 (7) | −0.0113 (7) |
| C1 | 0.0321 (9) | 0.0351 (9) | 0.0252 (8) | −0.0028 (7) | 0.0045 (6) | −0.0011 (7) |
| C2 | 0.0401 (10) | 0.0319 (8) | 0.0248 (8) | −0.0056 (7) | 0.0022 (7) | 0.0034 (6) |
| C3 | 0.0454 (10) | 0.0276 (8) | 0.0297 (9) | −0.0012 (7) | 0.0050 (7) | −0.0028 (7) |
| C4 | 0.0326 (9) | 0.0382 (9) | 0.0231 (8) | −0.0031 (7) | 0.0048 (6) | −0.0021 (7) |
| C5 | 0.0497 (11) | 0.0346 (9) | 0.0279 (9) | 0.0011 (8) | 0.0095 (7) | 0.0067 (7) |
| C6 | 0.0505 (11) | 0.0308 (9) | 0.0345 (9) | 0.0045 (8) | 0.0105 (8) | 0.0007 (7) |
| C7 | 0.0401 (10) | 0.0380 (9) | 0.0289 (9) | −0.0008 (7) | 0.0066 (7) | −0.0029 (7) |
| C8 | 0.0366 (9) | 0.0356 (9) | 0.0293 (9) | 0.0004 (7) | 0.0087 (7) | 0.0002 (7) |
| C9 | 0.0349 (9) | 0.0354 (9) | 0.0262 (8) | −0.0042 (7) | 0.0094 (6) | 0.0010 (7) |
| C10 | 0.0488 (11) | 0.0458 (10) | 0.0313 (9) | 0.0046 (8) | 0.0081 (8) | 0.0052 (8) |
| C11 | 0.0562 (13) | 0.0653 (13) | 0.0286 (10) | −0.0055 (10) | 0.0042 (8) | 0.0029 (9) |
| C12 | 0.0471 (11) | 0.0433 (10) | 0.0447 (11) | −0.0026 (8) | 0.0166 (9) | −0.0090 (8) |
| C13 | 0.0364 (10) | 0.0408 (9) | 0.0312 (9) | −0.0027 (7) | 0.0082 (7) | 0.0002 (7) |
| C14 | 0.0585 (12) | 0.0435 (10) | 0.0387 (10) | −0.0069 (9) | 0.0171 (8) | −0.0122 (8) |
Geometric parameters (Å, °)
| O1—C2 | 1.3471 (19) | C3—H3 | 0.9300 |
| O1—H1 | 0.8200 | C4—C5 | 1.385 (2) |
| O2—C8 | 1.224 (2) | C5—C6 | 1.365 (2) |
| O3—C4 | 1.3583 (19) | C5—H5 | 0.9300 |
| O3—C14 | 1.425 (2) | C6—H6 | 0.9300 |
| O4—H4A | 0.861 (9) | C7—H7 | 0.9300 |
| O4—H4B | 0.853 (9) | C8—C9 | 1.496 (2) |
| N1—C7 | 1.276 (2) | C9—C10 | 1.383 (2) |
| N1—N2 | 1.3791 (19) | C9—C13 | 1.384 (2) |
| N2—C8 | 1.339 (2) | C10—C11 | 1.377 (2) |
| N2—H2 | 0.903 (9) | C10—H10 | 0.9300 |
| N3—C11 | 1.329 (3) | C11—H11 | 0.9300 |
| N3—C12 | 1.332 (2) | C12—C13 | 1.375 (2) |
| C1—C6 | 1.390 (2) | C12—H12 | 0.9300 |
| C1—C2 | 1.398 (2) | C13—H13 | 0.9300 |
| C1—C7 | 1.444 (2) | C14—H14A | 0.9600 |
| C2—C3 | 1.386 (2) | C14—H14B | 0.9600 |
| C3—C4 | 1.376 (2) | C14—H14C | 0.9600 |
| C2—O1—H1 | 109.5 | N1—C7—H7 | 119.1 |
| C4—O3—C14 | 117.81 (13) | C1—C7—H7 | 119.1 |
| H4A—O4—H4B | 106.4 (17) | O2—C8—N2 | 124.03 (15) |
| C7—N1—N2 | 115.77 (14) | O2—C8—C9 | 121.38 (14) |
| C8—N2—N1 | 119.21 (14) | N2—C8—C9 | 114.52 (14) |
| C8—N2—H2 | 122.6 (15) | C10—C9—C13 | 117.94 (15) |
| N1—N2—H2 | 118.1 (15) | C10—C9—C8 | 118.47 (15) |
| C11—N3—C12 | 116.82 (15) | C13—C9—C8 | 123.55 (15) |
| C6—C1—C2 | 117.59 (14) | C11—C10—C9 | 118.96 (17) |
| C6—C1—C7 | 119.62 (15) | C11—C10—H10 | 120.5 |
| C2—C1—C7 | 122.77 (14) | C9—C10—H10 | 120.5 |
| O1—C2—C3 | 117.41 (15) | N3—C11—C10 | 123.61 (17) |
| O1—C2—C1 | 121.76 (14) | N3—C11—H11 | 118.2 |
| C3—C2—C1 | 120.83 (14) | C10—C11—H11 | 118.2 |
| C4—C3—C2 | 119.47 (15) | N3—C12—C13 | 123.90 (18) |
| C4—C3—H3 | 120.3 | N3—C12—H12 | 118.1 |
| C2—C3—H3 | 120.3 | C13—C12—H12 | 118.1 |
| O3—C4—C3 | 124.30 (15) | C12—C13—C9 | 118.71 (16) |
| O3—C4—C5 | 114.93 (14) | C12—C13—H13 | 120.6 |
| C3—C4—C5 | 120.77 (15) | C9—C13—H13 | 120.6 |
| C6—C5—C4 | 119.09 (15) | O3—C14—H14A | 109.5 |
| C6—C5—H5 | 120.5 | O3—C14—H14B | 109.5 |
| C4—C5—H5 | 120.5 | H14A—C14—H14B | 109.5 |
| C5—C6—C1 | 122.25 (16) | O3—C14—H14C | 109.5 |
| C5—C6—H6 | 118.9 | H14A—C14—H14C | 109.5 |
| C1—C6—H6 | 118.9 | H14B—C14—H14C | 109.5 |
| N1—C7—C1 | 121.88 (15) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1···N1 | 0.82 | 1.92 | 2.644 (2) | 146. |
| O4—H4B···O2i | 0.85 (1) | 2.07 (1) | 2.924 (2) | 176 (2) |
| O4—H4A···N3ii | 0.86 (1) | 1.97 (1) | 2.832 (2) | 178 (2) |
| N2—H2···O4iii | 0.90 (1) | 2.02 (1) | 2.915 (2) | 169 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, y+1, z; (iii) x, −y+1/2, z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SU2062).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808029619/su2062sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808029619/su2062Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


