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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Sep 13;64(Pt 10):o1906. doi: 10.1107/S1600536808028092

N-(2-Amino­phenyl­sulfonyl)-N-(2-nitro­phenyl­sulfonyl)methylamine

Xu-Yun Li a, Zu-Wei Song a,*
PMCID: PMC2959438  PMID: 21201116

Abstract

In the title mol­ecule, C13H13N3O6S2, the two benzene rings form a dihedral angle of 28.59 (7)°. The crystal sructure exhibits weak inter­molecular N—H⋯O, C—H⋯O and C—H⋯N hydrogen bonds and π–π inter­actions [centroid-to-centroid distance = 3.899 (3) Å].

Related literature

For applications of sulfonimide-containing compounds, see: Kamoshita et al. (1987); Zhang et al. (2007). For the crystal structure of a related compound, see: Henschel et al. (1996).graphic file with name e-64-o1906-scheme1.jpg

Experimental

Crystal data

  • C13H13N3O6S2

  • M r = 371.38

  • Orthorhombic, Inline graphic

  • a = 13.844 (3) Å

  • b = 12.942 (2) Å

  • c = 16.645 (3) Å

  • V = 2982.2 (10) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.40 mm−1

  • T = 153 (2) K

  • 0.60 × 0.56 × 0.08 mm

Data collection

  • Rigaku R-AXIS RAPID IP area-detector diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995) T min = 0.733, T max = 0.969

  • 34829 measured reflections

  • 2630 independent reflections

  • 2428 reflections with I > 2σ(I)

  • R int = 0.027

Refinement

  • R[F 2 > 2σ(F 2)] = 0.032

  • wR(F 2) = 0.087

  • S = 1.08

  • 2630 reflections

  • 218 parameters

  • H-atom parameters constrained

  • Δρmax = 0.42 e Å−3

  • Δρmin = −0.39 e Å−3

Data collection: RAPID-AUTO (Rigaku, 2004); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808028092/cv2436sup1.cif

e-64-o1906-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808028092/cv2436Isup2.hkl

e-64-o1906-Isup2.hkl (129.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N3—H3C⋯O1ii 0.88 2.52 3.366 (2) 160
C12—H12A⋯O2ii 0.95 2.59 3.508 (3) 162
C9—H9A⋯N3iii 0.95 2.59 3.372 (3) 140

Symmetry codes: (ii) Inline graphic; (iii) Inline graphic.

supplementary crystallographic information

Comment

Many compounds containing sulfonimide groups possess a broad spectrum of biological activities and can be widely used as herbicides (Kamoshita et al., 1987) or catalysts (Zhang et al., 2007). Herein we report the crystal structure of the title compound, (I).

In (I) (Fig. 1), all bond lengths and angles are in a good agreement with those reported previously for related compounds (Henschel et al., 1996). Two benzene rings (C1–C6 and C8–C13) form a dihedral angle of 28.59 (7)°.

The crystal packing exhibits π–π interactions (Table 1) and weak intermolecular N—H···O, C—H···N and C—H···O hydrogen bonds (Table 2).

Experimental

A solution of 2-aminobenzene-1-sulfonyl chloride (10 mmol) 1.92 g dissolved in anhydrous CH2Cl2 (10 ml), and dropwise added over a period of 10 min to a solution of 2-nitro-N-methyl-benzenesulfonamide (10 mmol) 2.16g and EtN(i-Pr)2 (3 mmol) in CH2Cl2 (10 ml) at 273 K. The mixture was stirred at r.t. for 4 h. The organic phase was washed with 2N HCl twice, and dried over anhydrous Na2SO4. The solvent was removed and the residue was purified by flash chromatography (3:1 Cyclohexane:Dichloromethane) to give 1 as a white solid (3.52 mg, 95 %). Single crystals suitable for X-ray measurements were obtained by recrystallization from ethanol and Dichloromethane at room temperature.

Refinement

H atoms were positioned geometrically and refined using a riding model, with N—H = 0.88 Å, C—H = 0.95 or 0.98 Å and with Uiso(H) = 1.2 (1.5 for methyl groups) Ueq(C,N).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I), with atom labels and 40% probability displacement ellipsoids for non-H atoms.

Fig. 2.

Fig. 2.

Packing diagram.

Crystal data

C13H13N3O6S2 F(000) = 1536
Mr = 371.38 Dx = 1.654 Mg m3
Orthorhombic, Pbca Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2ab Cell parameters from 37072 reflections
a = 13.844 (3) Å θ = 6.3–55.1°
b = 12.942 (2) Å µ = 0.40 mm1
c = 16.645 (3) Å T = 153 K
V = 2982.2 (10) Å3 Platelet, yellow
Z = 8 0.60 × 0.56 × 0.08 mm

Data collection

Rigaku R-AXIS RAPID IP area-detector diffractometer 2630 independent reflections
Radiation source: Rotating anode 2428 reflections with I > 2σ(I)
graphite Rint = 0.027
ω oscillation scans θmax = 25.0°, θmin = 3.2°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) h = −16→16
Tmin = 0.733, Tmax = 0.969 k = −15→15
34829 measured reflections l = −19→18

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032 H-atom parameters constrained
wR(F2) = 0.087 w = 1/[σ2(Fo2) + (0.0473P)2 + 2.1978P] where P = (Fo2 + 2Fc2)/3
S = 1.08 (Δ/σ)max < 0.001
2630 reflections Δρmax = 0.42 e Å3
218 parameters Δρmin = −0.39 e Å3
0 restraints Extinction correction: SHELXTL (Sheldrick, 2001), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.0018 (3)

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.22770 (3) 0.20009 (3) 0.06984 (2) 0.01845 (14)
S2 0.43344 (3) 0.22433 (4) 0.04145 (2) 0.01991 (15)
O1 0.49675 (13) 0.12116 (13) −0.20069 (10) 0.0487 (5)
O2 0.40368 (12) 0.08365 (11) −0.10127 (9) 0.0364 (4)
O3 0.51339 (9) 0.15580 (11) 0.03241 (8) 0.0281 (3)
O4 0.43340 (9) 0.29881 (11) 0.10485 (8) 0.0275 (3)
O5 0.16079 (10) 0.12669 (11) 0.03769 (8) 0.0288 (3)
O6 0.23132 (9) 0.30186 (10) 0.03747 (8) 0.0243 (3)
N1 0.44722 (12) 0.14579 (12) −0.14329 (9) 0.0266 (4)
N2 0.33660 (11) 0.14908 (11) 0.05243 (9) 0.0214 (3)
N3 0.14942 (13) 0.03260 (13) 0.19054 (11) 0.0366 (4)
H3B 0.1590 0.0188 0.1394 0.044*
H3C 0.1251 −0.0150 0.2224 0.044*
C1 0.43468 (12) 0.25628 (14) −0.12717 (11) 0.0211 (4)
C2 0.43337 (13) 0.31966 (16) −0.19394 (11) 0.0268 (4)
H2A 0.4441 0.2917 −0.2460 0.032*
C3 0.41632 (14) 0.42395 (16) −0.18432 (12) 0.0301 (5)
H3D 0.4138 0.4678 −0.2300 0.036*
C4 0.40295 (14) 0.46490 (15) −0.10843 (12) 0.0298 (4)
H4B 0.3924 0.5370 −0.1020 0.036*
C5 0.40499 (13) 0.40078 (15) −0.04174 (11) 0.0238 (4)
H5B 0.3961 0.4295 0.0102 0.029*
C6 0.41971 (12) 0.29552 (14) −0.04974 (11) 0.0186 (4)
C7 0.34860 (16) 0.03595 (15) 0.06305 (13) 0.0347 (5)
H7A 0.4155 0.0166 0.0511 0.052*
H7B 0.3049 −0.0006 0.0264 0.052*
H7C 0.3333 0.0171 0.1186 0.052*
C8 0.21121 (13) 0.20842 (14) 0.17402 (11) 0.0211 (4)
C9 0.23455 (13) 0.30465 (15) 0.20835 (12) 0.0255 (4)
H9A 0.2607 0.3580 0.1758 0.031*
C10 0.21958 (14) 0.32160 (18) 0.28892 (12) 0.0328 (5)
H10A 0.2351 0.3864 0.3125 0.039*
C11 0.18139 (14) 0.24220 (19) 0.33523 (12) 0.0359 (5)
H11A 0.1707 0.2536 0.3909 0.043*
C12 0.15875 (14) 0.14838 (18) 0.30301 (12) 0.0340 (5)
H12A 0.1334 0.0957 0.3367 0.041*
C13 0.17225 (13) 0.12809 (15) 0.22050 (12) 0.0272 (4)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0183 (2) 0.0203 (2) 0.0167 (2) 0.00124 (16) 0.00013 (16) −0.00004 (16)
S2 0.0185 (2) 0.0241 (3) 0.0171 (2) 0.00214 (16) −0.00052 (16) −0.00013 (17)
O1 0.0593 (11) 0.0436 (10) 0.0431 (9) 0.0052 (8) 0.0250 (8) −0.0135 (7)
O2 0.0501 (9) 0.0231 (7) 0.0360 (8) −0.0032 (7) 0.0085 (7) −0.0021 (6)
O3 0.0214 (7) 0.0326 (8) 0.0304 (7) 0.0080 (6) 0.0002 (5) 0.0034 (6)
O4 0.0305 (7) 0.0326 (8) 0.0195 (7) −0.0013 (6) −0.0024 (5) −0.0053 (5)
O5 0.0265 (7) 0.0303 (7) 0.0297 (7) −0.0043 (6) −0.0045 (5) −0.0064 (6)
O6 0.0249 (7) 0.0236 (7) 0.0246 (7) 0.0045 (5) 0.0016 (5) 0.0051 (5)
N1 0.0301 (8) 0.0271 (9) 0.0226 (8) 0.0023 (7) 0.0029 (7) −0.0057 (7)
N2 0.0223 (8) 0.0175 (8) 0.0243 (7) 0.0030 (6) 0.0058 (6) 0.0015 (6)
N3 0.0400 (10) 0.0259 (9) 0.0438 (10) 0.0013 (8) 0.0158 (8) 0.0048 (8)
C1 0.0195 (9) 0.0215 (9) 0.0222 (9) −0.0018 (7) 0.0022 (7) −0.0026 (7)
C2 0.0257 (10) 0.0352 (11) 0.0194 (9) −0.0058 (8) 0.0032 (7) 0.0002 (8)
C3 0.0301 (10) 0.0315 (11) 0.0287 (10) −0.0056 (8) 0.0013 (8) 0.0107 (8)
C4 0.0310 (10) 0.0213 (10) 0.0371 (11) −0.0013 (8) 0.0021 (9) 0.0041 (8)
C5 0.0235 (9) 0.0227 (9) 0.0251 (9) −0.0004 (7) 0.0024 (7) −0.0027 (7)
C6 0.0163 (8) 0.0220 (9) 0.0176 (9) −0.0013 (7) 0.0014 (7) 0.0004 (7)
C7 0.0367 (11) 0.0204 (10) 0.0470 (12) 0.0061 (9) 0.0130 (10) 0.0079 (9)
C8 0.0174 (8) 0.0287 (10) 0.0171 (9) 0.0045 (7) 0.0010 (7) 0.0007 (7)
C9 0.0194 (9) 0.0316 (11) 0.0256 (10) 0.0026 (8) 0.0009 (7) −0.0022 (8)
C10 0.0245 (10) 0.0453 (12) 0.0285 (10) 0.0031 (9) −0.0014 (8) −0.0121 (9)
C11 0.0248 (10) 0.0614 (15) 0.0215 (10) 0.0066 (10) 0.0013 (8) 0.0007 (10)
C12 0.0254 (10) 0.0476 (13) 0.0289 (10) 0.0092 (9) 0.0078 (8) 0.0112 (9)
C13 0.0205 (9) 0.0299 (10) 0.0311 (10) 0.0062 (8) 0.0045 (8) 0.0078 (8)

Geometric parameters (Å, °)

S1—O6 1.4239 (13) C3—C4 1.382 (3)
S1—O5 1.4307 (13) C3—H3D 0.9500
S1—N2 1.6711 (15) C4—C5 1.386 (3)
S1—C8 1.7523 (18) C4—H4B 0.9500
S2—O3 1.4263 (13) C5—C6 1.384 (3)
S2—O4 1.4291 (14) C5—H5B 0.9500
S2—N2 1.6671 (15) C7—H7A 0.9800
S2—C6 1.7859 (18) C7—H7B 0.9800
O1—N1 1.218 (2) C7—H7C 0.9800
O2—N1 1.224 (2) C8—C13 1.404 (3)
N1—C1 1.465 (2) C8—C9 1.408 (3)
N2—C7 1.484 (2) C9—C10 1.375 (3)
N3—C13 1.370 (3) C9—H9A 0.9500
N3—H3B 0.8800 C10—C11 1.389 (3)
N3—H3C 0.8800 C10—H10A 0.9500
C1—C2 1.381 (3) C11—C12 1.364 (3)
C1—C6 1.401 (2) C11—H11A 0.9500
C2—C3 1.380 (3) C12—C13 1.411 (3)
C2—H2A 0.9500 C12—H12A 0.9500
Cg1···Cg2i 3.899 (3)
O6—S1—O5 119.70 (8) C5—C4—H4B 120.0
O6—S1—N2 105.55 (8) C6—C5—C4 121.02 (18)
O5—S1—N2 104.89 (8) C6—C5—H5B 119.5
O6—S1—C8 108.79 (8) C4—C5—H5B 119.5
O5—S1—C8 109.06 (8) C5—C6—C1 117.86 (17)
N2—S1—C8 108.27 (8) C5—C6—S2 116.22 (14)
O3—S2—O4 119.85 (8) C1—C6—S2 125.40 (14)
O3—S2—N2 105.80 (8) N2—C7—H7A 109.5
O4—S2—N2 108.22 (8) N2—C7—H7B 109.5
O3—S2—C6 108.28 (8) H7A—C7—H7B 109.5
O4—S2—C6 106.24 (8) N2—C7—H7C 109.5
N2—S2—C6 107.99 (8) H7A—C7—H7C 109.5
O1—N1—O2 123.58 (17) H7B—C7—H7C 109.5
O1—N1—C1 117.75 (16) C13—C8—C9 121.31 (17)
O2—N1—C1 118.56 (15) C13—C8—S1 123.36 (15)
C7—N2—S2 119.96 (13) C9—C8—S1 115.23 (14)
C7—N2—S1 118.04 (12) C10—C9—C8 120.18 (19)
S2—N2—S1 120.91 (9) C10—C9—H9A 119.9
C13—N3—H3B 120.0 C8—C9—H9A 119.9
C13—N3—H3C 120.0 C9—C10—C11 118.7 (2)
H3B—N3—H3C 120.0 C9—C10—H10A 120.6
C2—C1—C6 121.53 (18) C11—C10—H10A 120.6
C2—C1—N1 115.70 (16) C12—C11—C10 121.86 (19)
C6—C1—N1 122.68 (16) C12—C11—H11A 119.1
C3—C2—C1 119.33 (18) C10—C11—H11A 119.1
C3—C2—H2A 120.3 C11—C12—C13 121.21 (19)
C1—C2—H2A 120.3 C11—C12—H12A 119.4
C2—C3—C4 120.27 (18) C13—C12—H12A 119.4
C2—C3—H3D 119.9 N3—C13—C8 123.80 (18)
C4—C3—H3D 119.9 N3—C13—C12 119.46 (18)
C3—C4—C5 119.96 (19) C8—C13—C12 116.72 (19)
C3—C4—H4B 120.0
O3—S2—N2—C7 8.83 (17) C2—C1—C6—S2 −172.37 (14)
O4—S2—N2—C7 −120.79 (15) N1—C1—C6—S2 11.1 (2)
C6—S2—N2—C7 124.60 (15) O3—S2—C6—C5 −134.60 (14)
O3—S2—N2—S1 176.65 (10) O4—S2—C6—C5 −4.64 (16)
O4—S2—N2—S1 47.02 (12) N2—S2—C6—C5 111.28 (15)
C6—S2—N2—S1 −67.59 (12) O3—S2—C6—C1 36.88 (18)
O6—S1—N2—C7 −166.74 (14) O4—S2—C6—C1 166.83 (15)
O5—S1—N2—C7 −39.44 (16) N2—S2—C6—C1 −77.25 (16)
C8—S1—N2—C7 76.90 (16) O6—S1—C8—C13 157.41 (15)
O6—S1—N2—S2 25.21 (12) O5—S1—C8—C13 25.25 (18)
O5—S1—N2—S2 152.52 (10) N2—S1—C8—C13 −88.35 (16)
C8—S1—N2—S2 −91.14 (11) O6—S1—C8—C9 −18.95 (16)
O1—N1—C1—C2 32.8 (2) O5—S1—C8—C9 −151.11 (13)
O2—N1—C1—C2 −143.45 (18) N2—S1—C8—C9 95.29 (14)
O1—N1—C1—C6 −150.48 (18) C13—C8—C9—C10 0.1 (3)
O2—N1—C1—C6 33.2 (3) S1—C8—C9—C10 176.58 (15)
C6—C1—C2—C3 −0.4 (3) C8—C9—C10—C11 0.1 (3)
N1—C1—C2—C3 176.31 (17) C9—C10—C11—C12 0.2 (3)
C1—C2—C3—C4 1.5 (3) C10—C11—C12—C13 −0.7 (3)
C2—C3—C4—C5 −1.1 (3) C9—C8—C13—N3 −179.11 (17)
C3—C4—C5—C6 −0.4 (3) S1—C8—C13—N3 4.8 (3)
C4—C5—C6—C1 1.4 (3) C9—C8—C13—C12 −0.6 (3)
C4—C5—C6—S2 173.57 (15) S1—C8—C13—C12 −176.77 (14)
C2—C1—C6—C5 −1.0 (3) C11—C12—C13—N3 179.44 (19)
N1—C1—C6—C5 −177.53 (16) C11—C12—C13—C8 0.9 (3)

Symmetry codes: (i) −x−1/2, y−1/2, z−1.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N3—H3C···O1ii 0.88 2.52 3.366 (2) 160.
C12—H12A···O2ii 0.95 2.59 3.508 (3) 162.
C9—H9A···N3iii 0.95 2.59 3.372 (3) 140.

Symmetry codes: (ii) −x+1/2, −y, z+1/2; (iii) −x+1/2, y+1/2, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV2436).

References

  1. Henschel, D., Hiemisch, O., Blaschette, A. & Jones, P. G. (1996). Z. Naturforsch. Teil B, 51, 1313–1315.
  2. Higashi, T. (1995). ABSCOR Rigaku Corporation, Tokyo, Japan.
  3. Kamoshita, K., Matsumoto, H. & Nagano, E. (1987). US Patent US 4 670 046.
  4. Rigaku (2004). RAPID-AUTO Rigaku Corporation, Takyo, Japan.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Zhang, Z. B., Zhou, S. Y. & Nie, J. (2007). J. Mol. Catal. A Chem.265, 9-14.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808028092/cv2436sup1.cif

e-64-o1906-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808028092/cv2436Isup2.hkl

e-64-o1906-Isup2.hkl (129.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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