Abstract
In the title compound, C16H15F2NO4, the dihedral angle between the three-membered ring and the quinoline ring system is 64.3 (3)°. In the crystal structure, intermolecular C—H⋯O hydrogen bonds link the molecules, forming a column running along [101].
Related literature
The title compound is a key intermediate in the synthesis of a series of fluoroquinolones, see: Matsumoto et al. (1996 ▶); Nagano et al. (1989 ▶); Petersen et al. (1993 ▶).
Experimental
Crystal data
C16H15F2NO4
M r = 323.29
Monoclinic,
a = 16.395 (3) Å
b = 17.732 (4) Å
c = 12.199 (2) Å
β = 123.71 (3)°
V = 2950.1 (14) Å3
Z = 8
Mo Kα radiation
μ = 0.12 mm−1
T = 293 (2) K
0.10 × 0.10 × 0.05 mm
Data collection
Enraf–Nonius CAD-4 diffractometer
Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.988, T max = 0.994
2760 measured reflections
2663 independent reflections
1580 reflections with I > 2σ(I)
R int = 0.068
3 standard reflections every 200 reflections intensity decay: none
Refinement
R[F 2 > 2σ(F 2)] = 0.061
wR(F 2) = 0.175
S = 1.04
2663 reflections
208 parameters
H-atom parameters constrained
Δρmax = 0.21 e Å−3
Δρmin = −0.19 e Å−3
Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2003 ▶).
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808034715/is2351sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808034715/is2351Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
C1—H1A⋯O2i | 0.96 | 2.58 | 3.220 (8) | 124 |
C12—H12B⋯O2ii | 0.97 | 2.50 | 3.273 (5) | 136 |
Symmetry codes: (i) ; (ii)
.
supplementary crystallographic information
Comment
The title compound, 1-cyclopropyl-6,7-difluoro-1,4-dihydro-8-methoxy-4-oxo-3-quinolinecarboxylic acid ethyl ester, is a key intermediate to synthesize a series of fluoroquinolones,such as moxifloxacin (Petersen et al., 1993), balofloxacin (Nagano et al., 1989) and gatifloxacin (Matsumoto et al., 1996). As part of our studies in this area, we report here the synthesis and crystal structure of the title compound, (I) (Fig. 1).
The benzene ring and its adjacent six-membered ring were almost coplanar. The dihedral angles between the three-membered ring and the benzene ring is 65.30 (14)°. In the crystal structure, intermolecular C—H···O hydrogen bonds link the molecules, in which they are effective in the stabilization of the structure.
Experimental
A solution of 26 g (0.075 mol) of 3-cyclopropylamino-2- (2,4,5-trifluoro-3-methoxybenzoyl)acrylic acid ethyl ester and 110 ml of DMF was treated with 22 g (0.16 mol) of K2CO3, and then heated to 50 °C with stirring for 1 h. The resulting precipitate was filtered, washed with the mixture of ice and water, and dried to give 23 g of the title compound (yield 95%). Crystals of (I) suitable for X-ray diffraction were obtained by slow evaporation of a methanol solution.
Refinement
All H atoms were placed geometrically (C—H = 0.93–0.98 Å) and refined as riding, with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(methyl C).
Figures
Fig. 1.
The molecular structure of the title compound, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.
Crystal data
C16H15F2NO4 | F(000) = 1344 |
Mr = 323.29 | Dx = 1.456 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 25 reflections |
a = 16.395 (3) Å | θ = 9–12° |
b = 17.732 (4) Å | µ = 0.12 mm−1 |
c = 12.199 (2) Å | T = 293 K |
β = 123.71 (3)° | Block, colorless |
V = 2950.1 (14) Å3 | 0.10 × 0.10 × 0.05 mm |
Z = 8 |
Data collection
Enraf–Nonius CAD-4 diffractometer | 1580 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.068 |
graphite | θmax = 25.2°, θmin = 1.9° |
ω/2θ scans | h = −2→19 |
Absorption correction: ψ scan (North et al., 1968) | k = 0→21 |
Tmin = 0.988, Tmax = 0.994 | l = −14→12 |
2760 measured reflections | 3 standard reflections every 200 reflections |
2663 independent reflections | intensity decay: none |
Refinement
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.061 | H-atom parameters constrained |
wR(F2) = 0.175 | w = 1/[σ2(Fo2) + (0.06P)2 + 5P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
2663 reflections | Δρmax = 0.21 e Å−3 |
208 parameters | Δρmin = −0.19 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008) |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0026 (5) |
Special details
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
x | y | z | Uiso*/Ueq | ||
N | 0.1306 (2) | 0.28705 (16) | −0.2762 (2) | 0.0512 (7) | |
O1 | 0.1226 (2) | 0.17328 (16) | −0.4536 (2) | 0.0752 (8) | |
F1 | 0.1209 (2) | −0.01688 (12) | −0.1874 (3) | 0.1108 (10) | |
C1 | 0.0365 (4) | 0.1548 (3) | −0.5789 (4) | 0.1079 (18) | |
H1A | −0.0094 | 0.1957 | −0.6088 | 0.162* | |
H1B | 0.0072 | 0.1100 | −0.5709 | 0.162* | |
H1C | 0.0539 | 0.1462 | −0.6412 | 0.162* | |
O2 | 0.1328 (2) | 0.21459 (14) | 0.0430 (2) | 0.0736 (8) | |
F2 | 0.1196 (2) | 0.02669 (13) | −0.3966 (3) | 0.0991 (9) | |
C2 | 0.1223 (2) | 0.1543 (2) | −0.3446 (3) | 0.0550 (9) | |
O3 | 0.1010 (3) | 0.44539 (16) | −0.0591 (3) | 0.0988 (11) | |
C3 | 0.1211 (3) | 0.0799 (2) | −0.3166 (4) | 0.0664 (10) | |
O4 | 0.11605 (19) | 0.36229 (14) | 0.0869 (2) | 0.0666 (7) | |
C4 | 0.1229 (3) | 0.0575 (2) | −0.2074 (4) | 0.0689 (10) | |
C5 | 0.1266 (3) | 0.1091 (2) | −0.1231 (4) | 0.0604 (9) | |
H5A | 0.1274 | 0.0935 | −0.0497 | 0.073* | |
C6 | 0.1292 (2) | 0.18552 (18) | −0.1466 (3) | 0.0462 (8) | |
C7 | 0.1284 (2) | 0.20942 (18) | −0.2564 (3) | 0.0447 (8) | |
C8 | 0.1282 (2) | 0.23918 (19) | −0.0548 (3) | 0.0466 (8) | |
C9 | 0.1211 (2) | 0.31671 (18) | −0.0906 (3) | 0.0450 (8) | |
C10 | 0.1234 (2) | 0.33541 (19) | −0.1976 (3) | 0.0520 (8) | |
H10A | 0.1196 | 0.3864 | −0.2176 | 0.062* | |
C11 | 0.1438 (3) | 0.3184 (2) | −0.3768 (3) | 0.0650 (11) | |
H11A | 0.0854 | 0.3183 | −0.4672 | 0.078* | |
C12 | 0.2375 (3) | 0.3084 (2) | −0.3630 (4) | 0.0737 (11) | |
H12A | 0.2362 | 0.3011 | −0.4428 | 0.088* | |
H12B | 0.2885 | 0.2807 | −0.2869 | 0.088* | |
C13 | 0.2109 (3) | 0.3841 (2) | −0.3402 (4) | 0.0821 (13) | |
H13A | 0.1928 | 0.4227 | −0.4063 | 0.098* | |
H13B | 0.2452 | 0.4024 | −0.2502 | 0.098* | |
C14 | 0.1107 (3) | 0.3813 (2) | −0.0227 (3) | 0.0551 (9) | |
C15 | 0.1052 (3) | 0.4226 (2) | 0.1578 (4) | 0.0711 (11) | |
H15A | 0.0395 | 0.4435 | 0.1050 | 0.085* | |
H15B | 0.1517 | 0.4626 | 0.1770 | 0.085* | |
C16 | 0.1232 (4) | 0.3914 (3) | 0.2797 (4) | 0.0988 (16) | |
H16A | 0.1172 | 0.4306 | 0.3291 | 0.148* | |
H16B | 0.1882 | 0.3706 | 0.3308 | 0.148* | |
H16C | 0.0762 | 0.3524 | 0.2595 | 0.148* |
Atomic displacement parameters (Å2)
U11 | U22 | U33 | U12 | U13 | U23 | |
N | 0.0654 (18) | 0.0554 (18) | 0.0445 (15) | 0.0109 (13) | 0.0378 (14) | 0.0036 (13) |
O1 | 0.097 (2) | 0.087 (2) | 0.0541 (15) | −0.0087 (15) | 0.0494 (15) | −0.0196 (13) |
F1 | 0.182 (3) | 0.0485 (14) | 0.160 (3) | −0.0203 (15) | 0.131 (2) | −0.0184 (15) |
C1 | 0.110 (4) | 0.158 (5) | 0.060 (3) | 0.008 (3) | 0.049 (3) | −0.025 (3) |
O2 | 0.122 (2) | 0.0632 (16) | 0.0624 (16) | −0.0063 (15) | 0.0677 (17) | −0.0018 (13) |
F2 | 0.144 (2) | 0.0714 (16) | 0.119 (2) | −0.0169 (15) | 0.0963 (19) | −0.0394 (14) |
C2 | 0.051 (2) | 0.070 (3) | 0.0504 (19) | 0.0013 (17) | 0.0323 (16) | −0.0102 (17) |
O3 | 0.189 (3) | 0.0569 (18) | 0.101 (2) | 0.0292 (19) | 0.112 (2) | 0.0115 (16) |
C3 | 0.076 (3) | 0.061 (2) | 0.075 (2) | −0.0102 (19) | 0.050 (2) | −0.029 (2) |
O4 | 0.105 (2) | 0.0581 (15) | 0.0640 (15) | 0.0071 (13) | 0.0637 (15) | −0.0046 (12) |
C4 | 0.083 (3) | 0.048 (2) | 0.097 (3) | −0.0039 (19) | 0.063 (2) | −0.003 (2) |
C5 | 0.072 (2) | 0.054 (2) | 0.073 (2) | −0.0034 (18) | 0.052 (2) | −0.0022 (19) |
C6 | 0.0426 (17) | 0.053 (2) | 0.0471 (17) | −0.0039 (15) | 0.0275 (15) | −0.0054 (15) |
C7 | 0.0370 (16) | 0.055 (2) | 0.0448 (17) | 0.0004 (14) | 0.0242 (14) | −0.0072 (14) |
C8 | 0.0433 (17) | 0.059 (2) | 0.0429 (17) | −0.0052 (15) | 0.0273 (14) | −0.0085 (15) |
C9 | 0.0409 (17) | 0.058 (2) | 0.0382 (15) | 0.0037 (14) | 0.0234 (13) | −0.0034 (15) |
C10 | 0.063 (2) | 0.052 (2) | 0.0487 (18) | 0.0101 (16) | 0.0359 (17) | −0.0017 (16) |
C11 | 0.100 (3) | 0.066 (2) | 0.0420 (18) | 0.020 (2) | 0.047 (2) | 0.0113 (17) |
C12 | 0.106 (3) | 0.072 (3) | 0.079 (3) | 0.010 (2) | 0.074 (3) | 0.006 (2) |
C13 | 0.143 (4) | 0.060 (3) | 0.084 (3) | 0.005 (3) | 0.089 (3) | 0.009 (2) |
C14 | 0.072 (2) | 0.057 (2) | 0.0516 (19) | 0.0087 (18) | 0.0432 (18) | 0.0020 (17) |
C15 | 0.107 (3) | 0.064 (2) | 0.071 (2) | 0.012 (2) | 0.068 (2) | −0.0086 (19) |
C16 | 0.145 (4) | 0.099 (4) | 0.092 (3) | 0.014 (3) | 0.091 (3) | −0.011 (3) |
Geometric parameters (Å, °)
N—C10 | 1.340 (4) | C6—C7 | 1.398 (4) |
N—C7 | 1.402 (4) | C6—C8 | 1.477 (4) |
N—C11 | 1.468 (4) | C8—C9 | 1.428 (4) |
O1—C2 | 1.373 (4) | C9—C10 | 1.367 (4) |
O1—C1 | 1.429 (5) | C9—C14 | 1.479 (4) |
F1—C4 | 1.345 (4) | C10—H10A | 0.9300 |
C1—H1A | 0.9600 | C11—C12 | 1.462 (5) |
C1—H1B | 0.9600 | C11—C13 | 1.491 (6) |
C1—H1C | 0.9600 | C11—H11A | 0.9800 |
O2—C8 | 1.233 (4) | C12—C13 | 1.485 (5) |
F2—C3 | 1.348 (4) | C12—H12A | 0.9700 |
C2—C3 | 1.365 (5) | C12—H12B | 0.9700 |
C2—C7 | 1.416 (4) | C13—H13A | 0.9700 |
O3—C14 | 1.198 (4) | C13—H13B | 0.9700 |
C3—C4 | 1.374 (5) | C15—C16 | 1.455 (5) |
O4—C14 | 1.333 (4) | C15—H15A | 0.9700 |
O4—C15 | 1.448 (4) | C15—H15B | 0.9700 |
C4—C5 | 1.353 (5) | C16—H16A | 0.9600 |
C5—C6 | 1.391 (5) | C16—H16B | 0.9600 |
C5—H5A | 0.9300 | C16—H16C | 0.9600 |
C10—N—C7 | 119.0 (3) | N—C10—H10A | 117.0 |
C10—N—C11 | 117.9 (3) | C9—C10—H10A | 117.0 |
C7—N—C11 | 123.1 (3) | C12—C11—N | 119.4 (3) |
C2—O1—C1 | 116.6 (3) | C12—C11—C13 | 60.4 (3) |
O1—C1—H1A | 109.5 | N—C11—C13 | 118.2 (3) |
O1—C1—H1B | 109.5 | C12—C11—H11A | 115.8 |
H1A—C1—H1B | 109.5 | N—C11—H11A | 115.8 |
O1—C1—H1C | 109.5 | C13—C11—H11A | 115.8 |
H1A—C1—H1C | 109.5 | C11—C12—C13 | 60.8 (3) |
H1B—C1—H1C | 109.5 | C11—C12—H12A | 117.7 |
C3—C2—O1 | 119.2 (3) | C13—C12—H12A | 117.7 |
C3—C2—C7 | 118.8 (3) | C11—C12—H12B | 117.7 |
O1—C2—C7 | 122.0 (3) | C13—C12—H12B | 117.7 |
F2—C3—C2 | 119.5 (3) | H12A—C12—H12B | 114.8 |
F2—C3—C4 | 118.7 (4) | C12—C13—C11 | 58.8 (3) |
C2—C3—C4 | 121.8 (3) | C12—C13—H13A | 117.9 |
C14—O4—C15 | 116.7 (3) | C11—C13—H13A | 117.9 |
F1—C4—C5 | 121.3 (4) | C12—C13—H13B | 117.9 |
F1—C4—C3 | 118.1 (4) | C11—C13—H13B | 117.9 |
C5—C4—C3 | 120.6 (4) | H13A—C13—H13B | 115.0 |
C4—C5—C6 | 119.7 (3) | O3—C14—O4 | 122.2 (3) |
C4—C5—H5A | 120.1 | O3—C14—C9 | 124.0 (3) |
C6—C5—H5A | 120.1 | O4—C14—C9 | 113.7 (3) |
C5—C6—C7 | 120.5 (3) | O4—C15—C16 | 107.8 (3) |
C5—C6—C8 | 117.2 (3) | O4—C15—H15A | 110.1 |
C7—C6—C8 | 122.2 (3) | C16—C15—H15A | 110.1 |
C6—C7—N | 118.4 (3) | O4—C15—H15B | 110.1 |
C6—C7—C2 | 118.6 (3) | C16—C15—H15B | 110.1 |
N—C7—C2 | 123.0 (3) | H15A—C15—H15B | 108.5 |
O2—C8—C9 | 126.0 (3) | C15—C16—H16A | 109.5 |
O2—C8—C6 | 119.1 (3) | C15—C16—H16B | 109.5 |
C9—C8—C6 | 115.0 (3) | H16A—C16—H16B | 109.5 |
C10—C9—C8 | 119.0 (3) | C15—C16—H16C | 109.5 |
C10—C9—C14 | 114.9 (3) | H16A—C16—H16C | 109.5 |
C8—C9—C14 | 126.2 (3) | H16B—C16—H16C | 109.5 |
N—C10—C9 | 126.0 (3) | ||
C1—O1—C2—C3 | 66.2 (5) | C5—C6—C8—O2 | 5.6 (4) |
C1—O1—C2—C7 | −117.1 (4) | C7—C6—C8—O2 | −177.2 (3) |
O1—C2—C3—F2 | −0.4 (5) | C5—C6—C8—C9 | −174.0 (3) |
C7—C2—C3—F2 | −177.2 (3) | C7—C6—C8—C9 | 3.1 (4) |
O1—C2—C3—C4 | 178.6 (3) | O2—C8—C9—C10 | 175.5 (3) |
C7—C2—C3—C4 | 1.8 (6) | C6—C8—C9—C10 | −4.9 (4) |
F2—C3—C4—F1 | −1.4 (6) | O2—C8—C9—C14 | −4.8 (5) |
C2—C3—C4—F1 | 179.6 (3) | C6—C8—C9—C14 | 174.8 (3) |
F2—C3—C4—C5 | 178.6 (3) | C7—N—C10—C9 | 5.2 (5) |
C2—C3—C4—C5 | −0.5 (6) | C11—N—C10—C9 | −172.8 (3) |
F1—C4—C5—C6 | 179.6 (3) | C8—C9—C10—N | 0.9 (5) |
C3—C4—C5—C6 | −0.4 (6) | C14—C9—C10—N | −178.8 (3) |
C4—C5—C6—C7 | −0.2 (5) | C10—N—C11—C12 | 110.6 (4) |
C4—C5—C6—C8 | 177.0 (3) | C7—N—C11—C12 | −67.3 (5) |
C5—C6—C7—N | 179.6 (3) | C10—N—C11—C13 | 40.6 (5) |
C8—C6—C7—N | 2.6 (4) | C7—N—C11—C13 | −137.3 (3) |
C5—C6—C7—C2 | 1.6 (4) | N—C11—C12—C13 | −107.7 (4) |
C8—C6—C7—C2 | −175.5 (3) | N—C11—C13—C12 | 109.6 (4) |
C10—N—C7—C6 | −6.7 (4) | C15—O4—C14—O3 | 2.7 (5) |
C11—N—C7—C6 | 171.2 (3) | C15—O4—C14—C9 | −179.2 (3) |
C10—N—C7—C2 | 171.3 (3) | C10—C9—C14—O3 | 2.8 (5) |
C11—N—C7—C2 | −10.8 (5) | C8—C9—C14—O3 | −176.9 (4) |
C3—C2—C7—C6 | −2.3 (5) | C10—C9—C14—O4 | −175.2 (3) |
O1—C2—C7—C6 | −179.0 (3) | C8—C9—C14—O4 | 5.1 (5) |
C3—C2—C7—N | 179.7 (3) | C14—O4—C15—C16 | −174.3 (3) |
O1—C2—C7—N | 3.0 (5) |
Hydrogen-bond geometry (Å, °)
D—H···A | D—H | H···A | D···A | D—H···A |
C1—H1A···O2i | 0.96 | 2.58 | 3.220 (8) | 124 |
C12—H12B···O2ii | 0.97 | 2.50 | 3.273 (5) | 136 |
Symmetry codes: (i) −x, y, −z−1/2; (ii) −x+1/2, −y+1/2, −z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS2351).
References
- Enraf–Nonius (1989). CAD-4 Software Enraf–Nonius, Delft, The Netherlands.
- Harms, K. & Wocadlo, S. (1995). XCAD4 University of Marburg, Germany.
- Matsumoto, T., Hara, M. & Miyashita, K. (1996). PCT Int. Appl. WO 19 951 205.
- Nagano, H., Yokota, T. & Katoh, Y. (1989). Eur. Pat. Appl. EP 89 108 963.
- North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.
- Petersen, U., Krebs, A. & Schenke, T. (1993). Eur. Pat. Appl. EP 92 122 058.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2003). J. Appl. Cryst.36, 7–13.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808034715/is2351sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808034715/is2351Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report