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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Oct 4;64(Pt 11):o2060. doi: 10.1107/S1600536808031334

(m-Phenyl­enedimethyl­ene)diammonium dichloride

Hua Cheng a,*, Huisheng Li a
PMCID: PMC2959707  PMID: 21580926

Abstract

The asymmetric unit of the title compound, C8H14N2 2+·2Cl, contains one and a half of the dications and three chloride anions. The half molecule is completed by crystallographic twofold symmetry with two C atoms lying on the rotation axis. The two ammonium groups in each cation adopt a trans conformation with respect ot the benzene ring. The ammonium groups and chloride anions are involved in the formation of a three-dimensional N—H⋯Cl hydrogen-bonding network, which stabilizes the crystal packing.

Related literature

For general background and applications, see: Pasini & Zunino (1987); Otsuka et al. (1990); Michalson & Smuszkovicz (1989); Reedijk (1996); Blaser (1992); Soai & Niwa (1992); Jacobsen (1993); Kolb et al. (1994).graphic file with name e-64-o2060-scheme1.jpg

Experimental

Crystal data

  • C8H14N2 2+·2Cl

  • M r = 209.11

  • Monoclinic, Inline graphic

  • a = 27.5859 (18) Å

  • b = 13.1594 (14) Å

  • c = 8.8324 (6) Å

  • β = 103.539 (1)°

  • V = 3117.2 (4) Å3

  • Z = 12

  • Mo Kα radiation

  • μ = 0.58 mm−1

  • T = 298 (2) K

  • 0.20 × 0.10 × 0.10 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1997) T min = 0.893, T max = 0.945

  • 14623 measured reflections

  • 3066 independent reflections

  • 2615 reflections with I > 2σ(I)

  • R int = 0.103

Refinement

  • R[F 2 > 2σ(F 2)] = 0.043

  • wR(F 2) = 0.118

  • S = 1.06

  • 3066 reflections

  • 191 parameters

  • 9 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.36 e Å−3

  • Δρmin = −0.31 e Å−3

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808031334/cv2456sup1.cif

e-64-o2060-sup1.cif (17.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808031334/cv2456Isup2.hkl

e-64-o2060-Isup2.hkl (150.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N3—H3B⋯Cl1 0.878 (16) 2.338 (16) 3.206 (2) 170 (2)
N2—H2C⋯Cl3 0.927 (16) 2.360 (17) 3.2453 (19) 160 (2)
N1—H1B⋯Cl2 0.869 (15) 2.276 (17) 3.1186 (18) 163 (2)
N3—H3C⋯Cl2i 0.880 (17) 2.343 (19) 3.171 (2) 157 (2)
N2—H2B⋯Cl1ii 0.860 (16) 2.58 (2) 3.189 (2) 129.0 (19)
N1—H1C⋯Cl3iii 0.884 (15) 2.341 (17) 3.2071 (18) 166 (2)
N2—H2A⋯Cl2iv 0.842 (16) 2.442 (18) 3.201 (2) 150 (2)
N1—H1A⋯Cl3iv 0.858 (16) 2.506 (18) 3.2527 (17) 146.0 (19)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

The authors are grateful to Xiangfan University for financial support.

supplementary crystallographic information

Comment

The diamine compounds are important in biologically active natural products (Pasini & Zunino, 1987; Otsuka et al., 1990), in medicinal chemistry (Michalson & Smuszkovicz, 1989; Reedijk, 1996). They are also used as chiral auxiliaries and chiral ligands in asymmetric catalysis (Blaser, 1992; Soai & Niwa, 1992; Jacobsen, 1993; Kolb et al., 1994). Herewith we present the title diamine compound, (I).

In (I) (Fig. 1), all bond lengths and angles are normal. Two amino groups in the dications adopt trans-conformation and each amino group form three N—H···Cl hydrogen bonds (Table 1) to stabilize the crystal packing.

Experimental

1,3-Phenylenedimethanamine was dissolved in ethanol, then 1N HCl was dropped to the solution. Colourless, block-like crystals of (I) suitable for X-ray data collection were obtained by slow evaporation of ethanol at 283 K.

Refinement

All H atoms were initially located in a difference Fourier map. C-bound H atoms were placed in idealized positions (C—H = 0.93–0.97 Å) and refined as riding, with Uiso(H) = 1.2Ueq(C). Amino H atoms were refined with bond restraint of N—H = 0.88 (3) Å and constrained displacement parameter Uiso(H) = 1.2Ueq(N).

Figures

Fig. 1.

Fig. 1.

View of (I) showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. H atoms are represented by spheres of arbitrary radius.

Crystal data

C8H14N22+·2Cl F(000) = 1320
Mr = 209.11 Dx = 1.337 Mg m3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -c/2yc Cell parameters from 6157 reflections
a = 27.5859 (18) Å θ = 2.8–27.8°
b = 13.1594 (14) Å µ = 0.58 mm1
c = 8.8324 (6) Å T = 298 K
β = 103.539 (1)° Block, colourless
V = 3117.2 (4) Å3 0.20 × 0.10 × 0.10 mm
Z = 12

Data collection

Bruker SMART CCD area-detector diffractometer 3066 independent reflections
Radiation source: fine-focus sealed tube 2615 reflections with I > 2σ(I)
graphite Rint = 0.103
φ and ω scans θmax = 26.0°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1997) h = −33→33
Tmin = 0.894, Tmax = 0.945 k = −14→16
14623 measured reflections l = −10→10

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.118 H atoms treated by a mixture of independent and constrained refinement
S = 1.06 w = 1/[σ2(Fo2) + (0.0717P)2] where P = (Fo2 + 2Fc2)/3
3066 reflections (Δ/σ)max = 0.001
191 parameters Δρmax = 0.36 e Å3
9 restraints Δρmin = −0.31 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.27771 (7) 0.50258 (14) −0.0022 (2) 0.0355 (4)
C2 0.26673 (7) 0.60114 (16) 0.0327 (2) 0.0414 (5)
H2 0.2856 0.6547 0.0089 0.050*
C3 0.22778 (7) 0.62046 (16) 0.1031 (2) 0.0438 (5)
H3 0.2206 0.6870 0.1261 0.053*
C4 0.19964 (7) 0.54155 (16) 0.1392 (2) 0.0398 (5)
H4 0.1735 0.5549 0.1865 0.048*
C5 0.21012 (6) 0.44213 (14) 0.1052 (2) 0.0341 (4)
C6 0.24907 (7) 0.42332 (14) 0.0342 (2) 0.0355 (4)
H6 0.2561 0.3569 0.0106 0.043*
C7 0.31958 (8) 0.48207 (17) −0.0814 (2) 0.0447 (5)
H7A 0.3118 0.4215 −0.1450 0.054*
H7B 0.3220 0.5384 −0.1500 0.054*
C8 0.18156 (7) 0.35486 (16) 0.1535 (3) 0.0458 (5)
H8A 0.1995 0.2922 0.1469 0.055*
H8B 0.1802 0.3642 0.2613 0.055*
C9 0.00722 (7) 0.23186 (15) 0.6209 (2) 0.0349 (4)
C10 0.00730 (8) 0.12695 (16) 0.6221 (3) 0.0466 (5)
H10 0.0123 0.0915 0.5360 0.056*
C11 0.0000 0.0741 (2) 0.7500 0.0553 (8)
H11 0.0000 0.0034 0.7500 0.066*
C12 0.0000 0.2839 (2) 0.7500 0.0349 (6)
H12 0.0000 0.3546 0.7500 0.042*
C13 0.01564 (8) 0.28914 (19) 0.4806 (3) 0.0483 (5)
H13A 0.0100 0.2439 0.3915 0.058*
H13B −0.0081 0.3446 0.4561 0.058*
Cl1 0.08043 (2) 0.50782 (4) 0.76455 (6) 0.04504 (18)
Cl2 0.35181 (2) 0.28315 (4) 0.23278 (6) 0.04852 (19)
Cl3 0.094656 (19) 0.15614 (4) 0.24153 (6) 0.04295 (18)
N1 0.36851 (6) 0.46791 (14) 0.0298 (2) 0.0375 (4)
H1C 0.3787 (8) 0.5257 (13) 0.078 (3) 0.045*
H1A 0.3894 (7) 0.4518 (17) −0.025 (2) 0.045*
H1B 0.3683 (8) 0.4230 (15) 0.102 (2) 0.045*
N2 0.13028 (7) 0.34496 (14) 0.0574 (2) 0.0433 (4)
H2A 0.1269 (9) 0.3278 (17) −0.036 (2) 0.052*
H2B 0.1123 (8) 0.3989 (15) 0.050 (3) 0.052*
H2C 0.1129 (8) 0.2921 (15) 0.090 (3) 0.052*
N3 0.06651 (7) 0.32989 (15) 0.5100 (2) 0.0433 (4)
H3C 0.0906 (7) 0.2890 (16) 0.557 (3) 0.052*
H3A 0.0729 (8) 0.3619 (17) 0.430 (2) 0.052*
H3B 0.0690 (8) 0.3733 (16) 0.587 (2) 0.052*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0337 (10) 0.0412 (11) 0.0320 (10) 0.0014 (8) 0.0086 (8) 0.0026 (8)
C2 0.0419 (11) 0.0340 (11) 0.0477 (11) −0.0020 (9) 0.0093 (9) 0.0080 (9)
C3 0.0437 (11) 0.0300 (11) 0.0564 (13) 0.0065 (9) 0.0093 (10) 0.0010 (9)
C4 0.0348 (10) 0.0394 (11) 0.0465 (11) 0.0074 (8) 0.0121 (9) 0.0002 (9)
C5 0.0312 (9) 0.0350 (11) 0.0351 (10) −0.0009 (8) 0.0060 (8) 0.0031 (8)
C6 0.0383 (10) 0.0304 (10) 0.0373 (10) 0.0049 (8) 0.0080 (8) −0.0016 (8)
C7 0.0441 (12) 0.0572 (14) 0.0357 (11) 0.0029 (10) 0.0155 (10) 0.0038 (9)
C8 0.0410 (11) 0.0424 (12) 0.0537 (13) −0.0015 (9) 0.0106 (10) 0.0110 (10)
C9 0.0297 (9) 0.0420 (12) 0.0345 (10) −0.0004 (8) 0.0103 (8) 0.0021 (8)
C10 0.0534 (12) 0.0404 (13) 0.0487 (13) 0.0014 (10) 0.0174 (10) −0.0118 (10)
C11 0.070 (2) 0.0306 (16) 0.067 (2) 0.000 0.0181 (18) 0.000
C12 0.0321 (13) 0.0293 (14) 0.0460 (16) 0.000 0.0148 (12) 0.000
C13 0.0415 (11) 0.0678 (16) 0.0373 (11) −0.0028 (10) 0.0126 (9) 0.0077 (10)
Cl1 0.0547 (3) 0.0370 (3) 0.0492 (3) −0.0046 (2) 0.0237 (3) −0.0082 (2)
Cl2 0.0507 (3) 0.0449 (3) 0.0514 (3) 0.0066 (2) 0.0148 (3) 0.0119 (2)
Cl3 0.0483 (3) 0.0368 (3) 0.0480 (3) 0.0090 (2) 0.0199 (3) 0.0070 (2)
N1 0.0371 (9) 0.0345 (9) 0.0450 (10) −0.0037 (7) 0.0179 (8) −0.0048 (7)
N2 0.0414 (10) 0.0364 (10) 0.0530 (11) −0.0058 (8) 0.0132 (9) 0.0012 (8)
N3 0.0455 (10) 0.0417 (11) 0.0438 (11) −0.0037 (8) 0.0130 (9) 0.0101 (8)

Geometric parameters (Å, °)

C1—C2 1.383 (3) C9—C13 1.514 (3)
C1—C6 1.391 (3) C10—C11 1.381 (3)
C1—C7 1.508 (3) C10—H10 0.9300
C2—C3 1.385 (3) C11—C10i 1.381 (3)
C2—H2 0.9300 C11—H11 0.9300
C3—C4 1.378 (3) C12—C9i 1.384 (2)
C3—H3 0.9300 C12—H12 0.9300
C4—C5 1.388 (3) C13—N3 1.468 (3)
C4—H4 0.9300 C13—H13A 0.9700
C5—C6 1.387 (2) C13—H13B 0.9700
C5—C8 1.510 (3) N1—H1C 0.884 (15)
C6—H6 0.9300 N1—H1A 0.858 (16)
C7—N1 1.483 (3) N1—H1B 0.869 (15)
C7—H7A 0.9700 N2—H2A 0.842 (16)
C7—H7B 0.9700 N2—H2B 0.860 (16)
C8—N2 1.475 (3) N2—H2C 0.927 (16)
C8—H8A 0.9700 N3—H3C 0.880 (17)
C8—H8B 0.9700 N3—H3A 0.877 (16)
C9—C10 1.381 (3) N3—H3B 0.878 (16)
C9—C12 1.384 (2)
C2—C1—C6 119.05 (17) C9—C10—C11 120.7 (2)
C2—C1—C7 120.19 (17) C9—C10—H10 119.7
C6—C1—C7 120.75 (17) C11—C10—H10 119.7
C1—C2—C3 120.39 (18) C10—C11—C10i 119.5 (3)
C1—C2—H2 119.8 C10—C11—H11 120.2
C3—C2—H2 119.8 C10i—C11—H11 120.2
C4—C3—C2 120.25 (19) C9—C12—C9i 120.6 (3)
C4—C3—H3 119.9 C9—C12—H12 119.7
C2—C3—H3 119.9 C9i—C12—H12 119.7
C3—C4—C5 120.21 (17) N3—C13—C9 111.14 (18)
C3—C4—H4 119.9 N3—C13—H13A 109.4
C5—C4—H4 119.9 C9—C13—H13A 109.4
C6—C5—C4 119.26 (17) N3—C13—H13B 109.4
C6—C5—C8 120.17 (17) C9—C13—H13B 109.4
C4—C5—C8 120.46 (17) H13A—C13—H13B 108.0
C5—C6—C1 120.85 (17) C7—N1—H1C 110.3 (15)
C5—C6—H6 119.6 C7—N1—H1A 106.6 (15)
C1—C6—H6 119.6 H1C—N1—H1A 108 (2)
N1—C7—C1 113.13 (16) C7—N1—H1B 114.1 (14)
N1—C7—H7A 109.0 H1C—N1—H1B 107 (2)
C1—C7—H7A 109.0 H1A—N1—H1B 111 (2)
N1—C7—H7B 109.0 C8—N2—H2A 117.4 (18)
C1—C7—H7B 109.0 C8—N2—H2B 115.4 (16)
H7A—C7—H7B 107.8 H2A—N2—H2B 103 (2)
N2—C8—C5 113.48 (17) C8—N2—H2C 112.6 (15)
N2—C8—H8A 108.9 H2A—N2—H2C 99 (2)
C5—C8—H8A 108.9 H2B—N2—H2C 108 (2)
N2—C8—H8B 108.9 C13—N3—H3C 116.4 (16)
C5—C8—H8B 108.9 C13—N3—H3A 113.4 (16)
H8A—C8—H8B 107.7 H3C—N3—H3A 114 (2)
C10—C9—C12 119.27 (18) C13—N3—H3B 105.8 (15)
C10—C9—C13 120.27 (18) H3C—N3—H3B 97 (2)
C12—C9—C13 120.5 (2) H3A—N3—H3B 109 (2)
C6—C1—C2—C3 0.0 (3) C6—C1—C7—N1 −92.2 (2)
C7—C1—C2—C3 178.93 (19) C6—C5—C8—N2 −109.5 (2)
C1—C2—C3—C4 0.1 (3) C4—C5—C8—N2 74.2 (2)
C2—C3—C4—C5 0.0 (3) C12—C9—C10—C11 0.4 (3)
C3—C4—C5—C6 −0.2 (3) C13—C9—C10—C11 179.56 (17)
C3—C4—C5—C8 176.14 (19) C9—C10—C11—C10i −0.18 (13)
C4—C5—C6—C1 0.4 (3) C10—C9—C12—C9i −0.18 (13)
C8—C5—C6—C1 −175.99 (18) C13—C9—C12—C9i −179.4 (2)
C2—C1—C6—C5 −0.3 (3) C10—C9—C13—N3 −103.1 (2)
C7—C1—C6—C5 −179.17 (18) C12—C9—C13—N3 76.1 (2)
C2—C1—C7—N1 88.9 (2)

Symmetry codes: (i) −x, y, −z+3/2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N3—H3B···Cl1 0.88 (2) 2.34 (2) 3.206 (2) 170 (2)
N2—H2C···Cl3 0.93 (2) 2.36 (2) 3.2453 (19) 160 (2)
N1—H1B···Cl2 0.87 (2) 2.28 (2) 3.1186 (18) 163 (2)
N3—H3C···Cl2ii 0.88 (2) 2.34 (2) 3.171 (2) 157 (2)
N2—H2B···Cl1iii 0.86 (2) 2.58 (2) 3.189 (2) 129 (2)
N1—H1C···Cl3iv 0.88 (2) 2.34 (2) 3.2071 (18) 166 (2)
N2—H2A···Cl2v 0.84 (2) 2.44 (2) 3.201 (2) 150 (2)
N1—H1A···Cl3v 0.86 (2) 2.51 (2) 3.2527 (17) 146 (2)

Symmetry codes: (ii) −x+1/2, −y+1/2, −z+1; (iii) x, −y+1, z−1/2; (iv) −x+1/2, y+1/2, −z+1/2; (v) −x+1/2, −y+1/2, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV2456).

References

  1. Blaser, H. U. (1992). Chem. Rev.92, 935–952.
  2. Bruker (1999). SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Bruker (2001). SMART Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Jacobsen, E. N. (1993). Catalytic Asymmetric Synthesis, pp. 159–202. New York: VCH.
  5. Kolb, H. C., VanNieuwenhze, M. S. & Sharpless, K. B. (1994). Chem. Rev.94, 2483–2547.
  6. Michalson, E. T. & Smuszkovicz, J. (1989). Prog. Drug. Res 33, 135–149. [DOI] [PubMed]
  7. Otsuka, M., Masuda, T., Haupt, A., Ohno, M., Shiraki, T., Sugiura, Y. & Maeda, K. (1990). J. Am. Chem. Soc.112, 838–845.
  8. Pasini, A. & Zunino, F. (1987). Angew. Chem. Int. Ed. Engl.26, 615–624.
  9. Reedijk, J. J. (1996). J. Chem. Soc. Chem. Commun. pp. 801–806.
  10. Sheldrick, G. M. (1997). SADABS University of Göttingen, Germany.
  11. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  12. Soai, K. & Niwa, S. (1992). Chem. Rev.92, 833–856.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808031334/cv2456sup1.cif

e-64-o2060-sup1.cif (17.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808031334/cv2456Isup2.hkl

e-64-o2060-Isup2.hkl (150.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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