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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Oct 11;64(Pt 11):o2109. doi: 10.1107/S1600536808032273

4-Nitro-N-(4-pyridinio)benzene­sulfonamidate monohydrate

Yu-Zhen Chen a,*, Han Gao b, Gang Li b, Xiao-Jing Chen c, Sheng-Yang Niu b
PMCID: PMC2959784  PMID: 21580973

Abstract

The title compound, C11H9N3O4S·H2O, contains both an acid and a base centre, and displays a zwitterionic structure in the solid state. The benzene ring makes an angle of 109.1 (2)° with the pyridinium ring. The crystal structure is stabilized by O—H⋯N, O—H⋯O and N—H⋯O hydrogen bonds.

Related literature

For related literature, see: Allen et al. (1987); Li et al. (2007); Damiano et al. (2007); Yu & Li (2007).graphic file with name e-64-o2109-scheme1.jpg

Experimental

Crystal data

  • C11H9N3O4S·H2O

  • M r = 297.29

  • Monoclinic, Inline graphic

  • a = 6.7766 (14) Å

  • b = 8.3932 (17) Å

  • c = 21.717 (4) Å

  • β = 92.35 (3)°

  • V = 1234.2 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.29 mm−1

  • T = 113 (2) K

  • 0.20 × 0.18 × 0.12 mm

Data collection

  • Rigaku Saturn CCD area-detector diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) T min = 0.932, T max = 0.963

  • 9708 measured reflections

  • 2908 independent reflections

  • 2022 reflections with I > 2σ(I)

  • R int = 0.061

Refinement

  • R[F 2 > 2σ(F 2)] = 0.055

  • wR(F 2) = 0.136

  • S = 1.17

  • 2908 reflections

  • 193 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.35 e Å−3

  • Δρmin = −0.45 e Å−3

Data collection: CrystalClear (Rigaku/MSC, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808032273/at2641sup1.cif

e-64-o2109-sup1.cif (17.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808032273/at2641Isup2.hkl

e-64-o2109-Isup2.hkl (142.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O5—H5A⋯N2 0.85 (4) 1.97 (4) 2.813 (3) 167 (4)
O5—H5B⋯O2i 0.85 (5) 2.07 (5) 2.895 (3) 164 (4)
N1—H1A⋯O5ii 0.92 (4) 1.82 (4) 2.728 (3) 170 (4)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

supplementary crystallographic information

Comment

Organic pyridinium salts have been widely used in the construction of supramolecular architectures (Teresa et al., 2007). As part of our ongoing studies of supramolecular chemistry involving the pyridinium rings (Li et al., 2007), the structure of the title compound (I) was determined by X-ray diffraction.

In the cations of (I) (Fig. 1), the short C—N distance [N2—C1 = 1.370 (3) Å] has a value between those of a typical C═N double and C—N single bond [1.47–1.50 Å and 1.34–1.38 Å, respectively; Allen et al., 1987]. This might be indicative of a slight π electron conjugation of the sulphonamide N with the pyridinium ring. The benzene ring exhibits an angle of 109.1 (2) ° with the pyridinium ring. The dihedral angle between the nitro group and the benzene ring is 2.2 (1) °.

The crystal structure is stabilized by O—H···N, O—H···O and N—H···O hydrogen bonds (Table 1).

Experimental

A solution of 4-nitrobenzenesulfonyl chloride (2.2 g, 10 mmol) in CH2Cl2 (10 ml) was added dropwise to a suspension of 4-aminopyridine (0.9 g, 10 mmol) in CH2Cl2 (10 ml) at room temperature with stirring. The reaction mixture was stirred overnight. The yellow solid obtained was washed with warm water to obtain the title compound in a yield of 55.3%. A colourless single-crystal suitable for X-ray analysis was obtained by slow evaporation of an acetic acid solution at room temperature over a period of a week.

Refinement

The H atoms of the water molecule were found on a difference Fourier map and refined freely. The N-bound H atoms were located in a difference map and their coordinates were refined with Uiso(H) = 1.2Ueq(N). The C-bound H atoms were positioned geometrically (C—H = 0.95 Å) and refined as riding with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

Molecular view of the title compound (I) showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 35% probability level (arbitrary spheres for the H atoms).

Crystal data

C11H9N3O4S·H2O F(000) = 616
Mr = 297.29 Dx = 1.600 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 3340 reflections
a = 6.7766 (14) Å θ = 1.9–27.9°
b = 8.3932 (17) Å µ = 0.29 mm1
c = 21.717 (4) Å T = 113 K
β = 92.35 (3)° Block, colourless
V = 1234.2 (4) Å3 0.20 × 0.18 × 0.12 mm
Z = 4

Data collection

Rigaku Saturn CCD area-detector diffractometer 2908 independent reflections
Radiation source: rotating anode 2022 reflections with I > 2σ(I)
confocal Rint = 0.061
Detector resolution: 7.31 pixels mm-1 θmax = 27.9°, θmin = 1.9°
ω and φ scans h = −8→7
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) k = −11→10
Tmin = 0.932, Tmax = 0.963 l = −19→28
9708 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.136 H atoms treated by a mixture of independent and constrained refinement
S = 1.17 w = 1/[σ2(Fo2) + (0.031P)2 + 1.5168P] where P = (Fo2 + 2Fc2)/3
2908 reflections (Δ/σ)max = 0.002
193 parameters Δρmax = 0.35 e Å3
0 restraints Δρmin = −0.45 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.89206 (11) 0.18818 (8) 0.12547 (3) 0.01574 (18)
N1 0.7145 (4) 0.7176 (3) 0.00969 (13) 0.0228 (6)
H1A 0.707 (6) 0.823 (5) −0.0019 (19) 0.048 (12)*
N2 0.8061 (4) 0.2477 (3) 0.06005 (11) 0.0166 (5)
N3 0.2350 (4) 0.1341 (3) 0.29976 (12) 0.0236 (6)
O1 1.0378 (3) 0.2937 (2) 0.15368 (9) 0.0197 (5)
O2 0.9523 (3) 0.0240 (2) 0.11577 (10) 0.0208 (5)
O3 0.2477 (4) 0.2106 (3) 0.34777 (10) 0.0332 (6)
O4 0.0934 (4) 0.0497 (3) 0.28506 (13) 0.0401 (7)
C1 0.7738 (4) 0.4058 (3) 0.04742 (13) 0.0151 (6)
C2 0.7618 (5) 0.5312 (3) 0.09068 (14) 0.0203 (6)
H2 0.7736 0.5099 0.1336 0.024*
C3 0.7329 (5) 0.6835 (4) 0.06978 (16) 0.0259 (7)
H3 0.7257 0.7677 0.0989 0.031*
C4 0.7199 (5) 0.6006 (4) −0.03300 (14) 0.0204 (6)
H4 0.7053 0.6265 −0.0755 0.024*
C5 0.7463 (4) 0.4454 (3) −0.01543 (14) 0.0176 (6)
H5 0.7462 0.3638 −0.0458 0.021*
C6 0.6953 (4) 0.1762 (3) 0.17671 (13) 0.0150 (6)
C7 0.5306 (5) 0.0811 (3) 0.16067 (13) 0.0182 (6)
H7 0.5230 0.0275 0.1221 0.022*
C8 0.3798 (5) 0.0659 (3) 0.20114 (14) 0.0180 (6)
H8 0.2678 0.0013 0.1912 0.022*
C9 0.3961 (4) 0.1475 (3) 0.25685 (13) 0.0171 (6)
C10 0.5550 (5) 0.2447 (3) 0.27298 (14) 0.0199 (6)
H10 0.5598 0.3011 0.3109 0.024*
C11 0.7072 (5) 0.2580 (3) 0.23239 (13) 0.0189 (6)
H11 0.8189 0.3226 0.2426 0.023*
O5 0.7268 (4) 0.0224 (2) −0.03361 (11) 0.0216 (5)
H5A 0.763 (6) 0.079 (5) −0.003 (2) 0.046 (13)*
H5B 0.815 (7) 0.027 (5) −0.060 (2) 0.049 (14)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0176 (4) 0.0143 (3) 0.0154 (3) 0.0017 (3) 0.0016 (3) 0.0006 (3)
N1 0.0216 (15) 0.0139 (11) 0.0326 (15) −0.0023 (10) −0.0021 (12) 0.0047 (11)
N2 0.0213 (14) 0.0133 (11) 0.0152 (11) 0.0014 (10) 0.0005 (10) 0.0005 (9)
N3 0.0253 (15) 0.0227 (13) 0.0231 (14) 0.0026 (11) 0.0061 (12) 0.0037 (11)
O1 0.0175 (11) 0.0213 (10) 0.0203 (11) −0.0013 (9) −0.0007 (8) −0.0004 (9)
O2 0.0254 (12) 0.0151 (10) 0.0222 (11) 0.0054 (8) 0.0056 (9) 0.0025 (8)
O3 0.0445 (16) 0.0358 (13) 0.0202 (11) −0.0024 (11) 0.0134 (11) −0.0026 (10)
O4 0.0294 (15) 0.0468 (15) 0.0452 (16) −0.0171 (12) 0.0146 (13) −0.0081 (13)
C1 0.0116 (15) 0.0138 (12) 0.0201 (14) −0.0010 (10) 0.0029 (12) 0.0012 (11)
C2 0.0251 (17) 0.0172 (13) 0.0184 (14) 0.0024 (12) −0.0027 (13) −0.0017 (12)
C3 0.0309 (19) 0.0169 (14) 0.0292 (17) 0.0010 (13) −0.0068 (14) −0.0050 (13)
C4 0.0158 (16) 0.0244 (14) 0.0211 (15) 0.0013 (12) 0.0026 (12) 0.0048 (12)
C5 0.0135 (15) 0.0199 (13) 0.0196 (14) 0.0005 (11) 0.0037 (12) −0.0003 (12)
C6 0.0155 (15) 0.0147 (12) 0.0148 (13) 0.0028 (11) 0.0008 (11) 0.0019 (11)
C7 0.0204 (16) 0.0189 (13) 0.0150 (13) 0.0013 (12) −0.0024 (12) −0.0021 (11)
C8 0.0164 (16) 0.0166 (13) 0.0207 (14) 0.0005 (11) −0.0012 (12) −0.0003 (12)
C9 0.0180 (15) 0.0170 (13) 0.0165 (14) 0.0022 (11) 0.0033 (12) 0.0033 (11)
C10 0.0241 (17) 0.0205 (13) 0.0151 (13) 0.0021 (12) 0.0000 (12) −0.0035 (12)
C11 0.0221 (16) 0.0190 (13) 0.0156 (13) −0.0026 (12) −0.0008 (12) −0.0012 (11)
O5 0.0292 (14) 0.0158 (10) 0.0199 (11) −0.0026 (9) 0.0037 (10) −0.0011 (9)

Geometric parameters (Å, °)

S1—O1 1.444 (2) C4—C5 1.367 (4)
S1—O2 1.455 (2) C4—H4 0.9500
S1—N2 1.594 (2) C5—H5 0.9500
S1—C6 1.774 (3) C6—C11 1.390 (4)
N1—C3 1.337 (4) C6—C7 1.404 (4)
N1—C4 1.352 (4) C7—C8 1.381 (4)
N1—H1A 0.92 (4) C7—H7 0.9500
N2—C1 1.370 (3) C8—C9 1.391 (4)
N3—O4 1.224 (4) C8—H8 0.9500
N3—O3 1.225 (3) C9—C10 1.385 (4)
N3—C9 1.468 (4) C10—C11 1.388 (4)
C1—C5 1.410 (4) C10—H10 0.9500
C1—C2 1.416 (4) C11—H11 0.9500
C2—C3 1.368 (4) O5—H5A 0.85 (4)
C2—H2 0.9500 O5—H5B 0.85 (5)
C3—H3 0.9500
O1—S1—O2 116.81 (13) C5—C4—H4 119.8
O1—S1—N2 113.86 (13) C4—C5—C1 120.4 (3)
O2—S1—N2 105.21 (12) C4—C5—H5 119.8
O1—S1—C6 106.69 (13) C1—C5—H5 119.8
O2—S1—C6 105.05 (13) C11—C6—C7 120.9 (3)
N2—S1—C6 108.69 (13) C11—C6—S1 120.0 (2)
C3—N1—C4 120.7 (3) C7—C6—S1 119.1 (2)
C3—N1—H1A 118 (3) C8—C7—C6 119.8 (3)
C4—N1—H1A 121 (3) C8—C7—H7 120.1
C1—N2—S1 122.1 (2) C6—C7—H7 120.1
O4—N3—O3 123.5 (3) C7—C8—C9 118.2 (3)
O4—N3—C9 118.3 (3) C7—C8—H8 120.9
O3—N3—C9 118.2 (3) C9—C8—H8 120.9
N2—C1—C5 115.9 (2) C10—C9—C8 122.9 (3)
N2—C1—C2 126.9 (3) C10—C9—N3 118.4 (3)
C5—C1—C2 117.2 (3) C8—C9—N3 118.7 (3)
C3—C2—C1 119.1 (3) C9—C10—C11 118.5 (3)
C3—C2—H2 120.5 C9—C10—H10 120.8
C1—C2—H2 120.5 C11—C10—H10 120.8
N1—C3—C2 122.0 (3) C10—C11—C6 119.6 (3)
N1—C3—H3 119.0 C10—C11—H11 120.2
C2—C3—H3 119.0 C6—C11—H11 120.2
N1—C4—C5 120.5 (3) H5A—O5—H5B 109 (4)
N1—C4—H4 119.8
O1—S1—N2—C1 −36.5 (3) O2—S1—C6—C7 −55.7 (3)
O2—S1—N2—C1 −165.6 (2) N2—S1—C6—C7 56.5 (3)
C6—S1—N2—C1 82.3 (3) C11—C6—C7—C8 −1.3 (4)
S1—N2—C1—C5 164.4 (2) S1—C6—C7—C8 177.6 (2)
S1—N2—C1—C2 −16.8 (4) C6—C7—C8—C9 0.5 (4)
N2—C1—C2—C3 178.6 (3) C7—C8—C9—C10 1.0 (4)
C5—C1—C2—C3 −2.7 (5) C7—C8—C9—N3 179.0 (3)
C4—N1—C3—C2 1.4 (5) O4—N3—C9—C10 179.1 (3)
C1—C2—C3—N1 0.4 (5) O3—N3—C9—C10 0.6 (4)
C3—N1—C4—C5 −0.6 (5) O4—N3—C9—C8 0.9 (4)
N1—C4—C5—C1 −1.8 (5) O3—N3—C9—C8 −177.6 (3)
N2—C1—C5—C4 −177.7 (3) C8—C9—C10—C11 −1.7 (4)
C2—C1—C5—C4 3.4 (4) N3—C9—C10—C11 −179.8 (3)
O1—S1—C6—C11 −1.5 (3) C9—C10—C11—C6 1.0 (4)
O2—S1—C6—C11 123.1 (2) C7—C6—C11—C10 0.5 (4)
N2—S1—C6—C11 −124.7 (2) S1—C6—C11—C10 −178.3 (2)
O1—S1—C6—C7 179.7 (2)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O5—H5A···N2 0.85 (4) 1.97 (4) 2.813 (3) 167 (4)
O5—H5B···O2i 0.85 (5) 2.07 (5) 2.895 (3) 164 (4)
N1—H1A···O5ii 0.92 (4) 1.82 (4) 2.728 (3) 170 (4)

Symmetry codes: (i) −x+2, −y, −z; (ii) x, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: AT2641).

References

  1. Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. 1–19.
  2. Damiano, T., Morton, D. & Nelson, A. (2007). Org. Biomol. Chem.5, 2735–2752. [DOI] [PubMed]
  3. Li, J. S., Chen, L. G., Zhang, Y. Y., Xu, Y. J., Deng, Y. & Huang, P. M. (2007). J. Chem. Res.6, 350–352.
  4. Rigaku/MSC (2005). CrystalClear Rigaku/MSC, The Woodlands, Texas, USA.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Yu, H.-J. & Li, J.-S. (2007). Acta Cryst. E63, o3399.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808032273/at2641sup1.cif

e-64-o2109-sup1.cif (17.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808032273/at2641Isup2.hkl

e-64-o2109-Isup2.hkl (142.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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