Abstract
The title thiourea molecule, C13H18N2OS, adopts a folded conformation due to the steric hindrance of the two ethyl groups and the acetyl group. In the crystal structure, the acetyl O atom is not involved in hydrogen bonding, but intermolecular N—H⋯S hydrogen bonds link the molecules into centrosymmetric dimers.
Related literature
For general background on the chemistry of thiourea derivatives, see: Choi et al. (2008 ▶); Jones et al. (2008 ▶); Kushwaha et al. (2008 ▶); Su et al. (2006 ▶). For related structures, see: Su (2005 ▶, 2007 ▶); Xian et al. (2004 ▶); Xian (2008 ▶).
Experimental
Crystal data
C13H18N2OS
M r = 250.35
Monoclinic,
a = 11.578 (7) Å
b = 12.804 (8) Å
c = 9.176 (6) Å
β = 103.842 (10)°
V = 1320.8 (15) Å3
Z = 4
Mo Kα radiation
μ = 0.23 mm−1
T = 296 (2) K
0.30 × 0.29 × 0.25 mm
Data collection
Bruker SMART CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 2000 ▶) T min = 0.933, T max = 0.944
7619 measured reflections
3080 independent reflections
2484 reflections with I > 2σ(I)
R int = 0.028
Refinement
R[F 2 > 2σ(F 2)] = 0.042
wR(F 2) = 0.124
S = 1.05
3080 reflections
156 parameters
H-atom parameters constrained
Δρmax = 0.48 e Å−3
Δρmin = −0.37 e Å−3
Data collection: APEX2 (Bruker, 2001 ▶); cell refinement: APEX2 and SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808035290/cv2467sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808035290/cv2467Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1′⋯S1i | 0.86 | 2.69 | 3.404 (3) | 141 |
Symmetry code: (i)
.
Acknowledgments
Financial support of this work by the Foundation of Northwest University for Nationalities are acknowledged.
supplementary crystallographic information
Comment
Thiourea and its derivatives attract special attention in recent years because of their broad applications, such as anion recognition, nonlinear optical material, catalysis etc., and also due to high bioactivity and good coordination ability (Choi et al., 2008; Kushwaha et al., 2008; Jones et al. 2008; Su et al., 2006). For a long time, we have being interested in the influence of non-covalent interactions related to the substituted groups on the conformations of thiourea derivatives as well as their coordination abilities. Thiourea derivatives with different substituted groups coordinate different transition metal ions providing various structures. One of the key influence factors in coordination reactions is non-covalent interaction. However, the central ion also plays and important role. Triangle conformation is commonly observed in the coordination compound of benzoylthiourea with Cu(I) (Xian et al., 2004). However, Cu6 cluster structure was also obtained (Su et al., 2005). Herewith we present the crystal structure of the title compound, (I).
The conformation and the packing diagram of (I) are shown in Figures 1 and 2, respectively. It can be seen that the title compound has a folded conformation which is similar to the structure we obtained before (CCDC No. 699688). The dihedral angle between the benzene ring and the plane O1/ N1/C7/C8 is 69.12 (6)°, and the dihedral angle between the benzene ring and the plane S1/C9/N1/N2 is 67.19 (6)°. Apparently, stereo-hindrance effect of two ethyl groups and acetyl group is the main influence factor to the folded conformation. Because of the absence of hydrogen atom on N2, the acetyl oxygen atom does not take part in hydrogen bonding interactions. This is different from the other carbonylthiourea derivatives (Su et al., 2006; Xian, 2008), in which the carbonyl oxygen atom often forms a six-membered hydrogen bonding ring. However, thiocarbonyl sulfur atom is involved in an intermolecular N—H···S hydrogen bond (Table 1), linking two molecules into centrosymmetric dimer, that was eralier observed in related structures (Su, 2007; Xian, 2008).
Experimental
All reagents and organic solvents were of analytical reagent grade and commercially available. Phenylacetyl chloride (1.55 g) was treated with ammonium thiocyanate (1.20 g) in CH2Cl2 under solid-liquid phase transfer catalysis conditions, using 3% polyethylene glycol-400 as catalyst, to give the corresponding phenylacetyl isothiocyanate, which was reacted with diethylamine (0.73 g) to give the title compound. The solid was separated from the liquid phase by filtration, washed with CH2Cl2 and then dried in air. Colorless single crystals suitable for X-ray analysis were obtained after one week by slow evaporation of an chloroform solution. The infrared spectrum was recorded in the range of 4000–400 cm-1 on a Nicolet NEXUS 670 F T—IR spectrometer, using KBr pellets. 1H NMR spectrum was obtained on an INOVA-400 MHz superconduction spectrometer, acetoned6 was used as solvent and TMS as internal standard, and the chemical shifts are expressed as delta. Elemental analyses were carried out on a PE-2400 elemental analysis instrument. Melting point determination was performed in YRT-3 melting point instrument (Tianjin) and was uncorrected. Melting Point: 92–94 °C. Elemental analysis (%) found (calcd.): C, 62.3(60.5); H, 7.2(6.9); N, 11.2(13.6); S, 12.8(10.9). IR (KBr, cm-1): 3190 (N—H), 3079, 1711 (C=O), 1548(C=C), 1233(C=S), 1121. 1H NMR(delta, p.p.m.): 2.06 (m, 3H, CH3); 2.85 (m, 3H, CH3);3.70 (m, 6H, 3CH2); 7.22–7.38 (m, 5H, C6H5); 9.25 (s, 1H, NH).
Refinement
All H atoms were placed in calculated positions (C–H = 0.93–0.97 Å, N–H = 0.86 Å) and refined using the riding model approximation, with Uiso(H) = 1.2 or 1.5 Ueq of the parent atom.
Figures
Fig. 1.
The molecular structure of the title compound. Displacement ellipsoids are drawn at the 40% probability level.
Fig. 2.
Packing diagram of the title compound viewed along the c axis. Intermolecular hydrogen bonds are shown as dashed lines.
Crystal data
| C13H18N2OS | F000 = 536 |
| Mr = 250.35 | Dx = 1.259 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation λ = 0.71073 Å |
| a = 11.578 (7) Å | Cell parameters from 3844 reflections |
| b = 12.804 (8) Å | θ = 2.4–29.9º |
| c = 9.176 (6) Å | µ = 0.23 mm−1 |
| β = 103.842 (10)º | T = 296 (2) K |
| V = 1320.8 (15) Å3 | Block, colorless |
| Z = 4 | 0.30 × 0.29 × 0.25 mm |
Data collection
| Bruker SMART CCD area-detector diffractometer | 3080 independent reflections |
| Radiation source: fine-focus sealed tube | 2484 reflections with I > 2σ(I) |
| Monochromator: graphite | Rint = 0.028 |
| T = 296(2) K | θmax = 28.0º |
| φ and ω scans | θmin = 1.8º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 2000) | h = −15→13 |
| Tmin = 0.934, Tmax = 0.944 | k = −16→16 |
| 7619 measured reflections | l = −12→11 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.042 | H-atom parameters constrained |
| wR(F2) = 0.124 | w = 1/[σ2(Fo2) + (0.0624P)2 + 0.2848P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.05 | (Δ/σ)max < 0.001 |
| 3080 reflections | Δρmax = 0.48 e Å−3 |
| 156 parameters | Δρmin = −0.37 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.61035 (14) | 0.09311 (14) | 0.9820 (2) | 0.0472 (4) | |
| H1 | 0.6752 | 0.0776 | 1.0607 | 0.057* | |
| C2 | 0.53176 (18) | 0.17042 (15) | 0.9993 (2) | 0.0570 (5) | |
| H2 | 0.5441 | 0.2071 | 1.0892 | 0.068* | |
| C3 | 0.43555 (19) | 0.19328 (17) | 0.8842 (3) | 0.0663 (6) | |
| H3 | 0.3821 | 0.2449 | 0.8962 | 0.080* | |
| C4 | 0.41832 (18) | 0.1398 (2) | 0.7515 (3) | 0.0716 (6) | |
| H4 | 0.3531 | 0.1552 | 0.6733 | 0.086* | |
| C5 | 0.49718 (16) | 0.06344 (17) | 0.7335 (2) | 0.0577 (5) | |
| H5 | 0.4856 | 0.0280 | 0.6426 | 0.069* | |
| C6 | 0.59380 (13) | 0.03890 (13) | 0.84970 (19) | 0.0406 (4) | |
| C7 | 0.67692 (14) | −0.04934 (13) | 0.8329 (2) | 0.0457 (4) | |
| H7A | 0.7249 | −0.0684 | 0.9311 | 0.055* | |
| H7B | 0.6303 | −0.1099 | 0.7909 | 0.055* | |
| C8 | 0.75749 (14) | −0.01928 (13) | 0.73300 (19) | 0.0426 (4) | |
| C9 | 0.95069 (13) | 0.06202 (11) | 0.73941 (17) | 0.0359 (3) | |
| C10 | 1.02328 (16) | 0.14815 (14) | 0.5447 (2) | 0.0488 (4) | |
| H10A | 0.9893 | 0.1590 | 0.4384 | 0.059* | |
| H10B | 1.0782 | 0.0899 | 0.5550 | 0.059* | |
| C11 | 1.0909 (2) | 0.24531 (17) | 0.6105 (3) | 0.0755 (6) | |
| H11A | 1.0370 | 0.3033 | 0.5999 | 0.113* | |
| H11B | 1.1517 | 0.2601 | 0.5583 | 0.113* | |
| H11C | 1.1268 | 0.2340 | 0.7149 | 0.113* | |
| C12 | 0.81587 (16) | 0.18024 (14) | 0.5634 (2) | 0.0491 (4) | |
| H12A | 0.8331 | 0.2545 | 0.5695 | 0.059* | |
| H12B | 0.7629 | 0.1657 | 0.6284 | 0.059* | |
| C13 | 0.75285 (19) | 0.15330 (19) | 0.4033 (2) | 0.0675 (6) | |
| H13A | 0.7990 | 0.1781 | 0.3363 | 0.101* | |
| H13B | 0.6759 | 0.1858 | 0.3788 | 0.101* | |
| H13C | 0.7438 | 0.0789 | 0.3935 | 0.101* | |
| N1 | 0.85660 (11) | 0.03650 (10) | 0.80451 (15) | 0.0398 (3) | |
| H1' | 0.8610 | 0.0570 | 0.8949 | 0.048* | |
| N2 | 0.92772 (11) | 0.12212 (10) | 0.61873 (14) | 0.0387 (3) | |
| O1 | 0.73627 (12) | −0.04082 (12) | 0.60141 (15) | 0.0640 (4) | |
| S1 | 1.08598 (3) | 0.01581 (4) | 0.82130 (5) | 0.04902 (16) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0353 (8) | 0.0537 (9) | 0.0528 (10) | −0.0047 (7) | 0.0107 (7) | 0.0001 (8) |
| C2 | 0.0569 (11) | 0.0526 (10) | 0.0681 (12) | −0.0026 (8) | 0.0276 (9) | −0.0033 (9) |
| C3 | 0.0603 (12) | 0.0608 (11) | 0.0887 (16) | 0.0197 (10) | 0.0394 (11) | 0.0248 (11) |
| C4 | 0.0507 (11) | 0.0962 (16) | 0.0667 (13) | 0.0215 (11) | 0.0120 (10) | 0.0285 (12) |
| C5 | 0.0466 (10) | 0.0793 (13) | 0.0460 (10) | 0.0026 (9) | 0.0088 (8) | 0.0047 (9) |
| C6 | 0.0312 (7) | 0.0456 (8) | 0.0473 (9) | −0.0053 (6) | 0.0135 (6) | 0.0047 (7) |
| C7 | 0.0391 (8) | 0.0452 (8) | 0.0553 (10) | −0.0041 (7) | 0.0166 (7) | 0.0006 (7) |
| C8 | 0.0372 (8) | 0.0469 (8) | 0.0445 (9) | 0.0000 (7) | 0.0114 (7) | −0.0029 (7) |
| C9 | 0.0347 (7) | 0.0387 (7) | 0.0351 (7) | −0.0001 (6) | 0.0101 (6) | −0.0047 (6) |
| C10 | 0.0481 (9) | 0.0569 (10) | 0.0460 (9) | −0.0014 (8) | 0.0203 (7) | 0.0064 (8) |
| C11 | 0.0678 (13) | 0.0557 (11) | 0.1072 (19) | −0.0136 (10) | 0.0293 (13) | 0.0072 (12) |
| C12 | 0.0502 (9) | 0.0500 (9) | 0.0473 (9) | 0.0154 (7) | 0.0124 (7) | 0.0034 (7) |
| C13 | 0.0625 (12) | 0.0880 (15) | 0.0467 (10) | 0.0285 (11) | 0.0026 (9) | 0.0024 (10) |
| N1 | 0.0344 (6) | 0.0527 (8) | 0.0340 (6) | −0.0010 (5) | 0.0115 (5) | −0.0037 (6) |
| N2 | 0.0375 (7) | 0.0411 (7) | 0.0386 (7) | 0.0032 (5) | 0.0115 (5) | −0.0004 (5) |
| O1 | 0.0590 (8) | 0.0866 (10) | 0.0472 (8) | −0.0209 (7) | 0.0143 (6) | −0.0180 (7) |
| S1 | 0.0346 (2) | 0.0687 (3) | 0.0442 (3) | 0.00839 (18) | 0.01022 (17) | 0.00658 (19) |
Geometric parameters (Å, °)
| C1—C6 | 1.371 (2) | C9—N1 | 1.401 (2) |
| C1—C2 | 1.379 (3) | C9—S1 | 1.6747 (17) |
| C1—H1 | 0.9300 | C10—N2 | 1.469 (2) |
| C2—C3 | 1.371 (3) | C10—C11 | 1.516 (3) |
| C2—H2 | 0.9300 | C10—H10A | 0.9700 |
| C3—C4 | 1.370 (4) | C10—H10B | 0.9700 |
| C3—H3 | 0.9300 | C11—H11A | 0.9600 |
| C4—C5 | 1.374 (3) | C11—H11B | 0.9600 |
| C4—H4 | 0.9300 | C11—H11C | 0.9600 |
| C5—C6 | 1.384 (2) | C12—N2 | 1.474 (2) |
| C5—H5 | 0.9300 | C12—C13 | 1.515 (3) |
| C6—C7 | 1.516 (2) | C12—H12A | 0.9700 |
| C7—C8 | 1.506 (2) | C12—H12B | 0.9700 |
| C7—H7A | 0.9700 | C13—H13A | 0.9600 |
| C7—H7B | 0.9700 | C13—H13B | 0.9600 |
| C8—O1 | 1.205 (2) | C13—H13C | 0.9600 |
| C8—N1 | 1.377 (2) | N1—H1' | 0.8600 |
| C9—N2 | 1.322 (2) | ||
| C6—C1—C2 | 120.61 (17) | N2—C10—C11 | 112.09 (16) |
| C6—C1—H1 | 119.7 | N2—C10—H10A | 109.2 |
| C2—C1—H1 | 119.7 | C11—C10—H10A | 109.2 |
| C3—C2—C1 | 120.1 (2) | N2—C10—H10B | 109.2 |
| C3—C2—H2 | 120.0 | C11—C10—H10B | 109.2 |
| C1—C2—H2 | 120.0 | H10A—C10—H10B | 107.9 |
| C4—C3—C2 | 119.81 (19) | C10—C11—H11A | 109.5 |
| C4—C3—H3 | 120.1 | C10—C11—H11B | 109.5 |
| C2—C3—H3 | 120.1 | H11A—C11—H11B | 109.5 |
| C3—C4—C5 | 120.2 (2) | C10—C11—H11C | 109.5 |
| C3—C4—H4 | 119.9 | H11A—C11—H11C | 109.5 |
| C5—C4—H4 | 119.9 | H11B—C11—H11C | 109.5 |
| C4—C5—C6 | 120.4 (2) | N2—C12—C13 | 113.49 (14) |
| C4—C5—H5 | 119.8 | N2—C12—H12A | 108.9 |
| C6—C5—H5 | 119.8 | C13—C12—H12A | 108.9 |
| C1—C6—C5 | 118.89 (17) | N2—C12—H12B | 108.9 |
| C1—C6—C7 | 120.65 (15) | C13—C12—H12B | 108.9 |
| C5—C6—C7 | 120.42 (17) | H12A—C12—H12B | 107.7 |
| C8—C7—C6 | 111.86 (14) | C12—C13—H13A | 109.5 |
| C8—C7—H7A | 109.2 | C12—C13—H13B | 109.5 |
| C6—C7—H7A | 109.2 | H13A—C13—H13B | 109.5 |
| C8—C7—H7B | 109.2 | C12—C13—H13C | 109.5 |
| C6—C7—H7B | 109.2 | H13A—C13—H13C | 109.5 |
| H7A—C7—H7B | 107.9 | H13B—C13—H13C | 109.5 |
| O1—C8—N1 | 122.88 (15) | C8—N1—C9 | 124.21 (14) |
| O1—C8—C7 | 122.95 (16) | C8—N1—H1' | 117.9 |
| N1—C8—C7 | 114.16 (15) | C9—N1—H1' | 117.9 |
| N2—C9—N1 | 118.15 (13) | C9—N2—C10 | 119.78 (13) |
| N2—C9—S1 | 124.09 (12) | C9—N2—C12 | 124.49 (13) |
| N1—C9—S1 | 117.75 (12) | C10—N2—C12 | 115.02 (14) |
| C6—C1—C2—C3 | 0.4 (3) | O1—C8—N1—C9 | −8.9 (3) |
| C1—C2—C3—C4 | −0.6 (3) | C7—C8—N1—C9 | 172.09 (14) |
| C2—C3—C4—C5 | 0.0 (3) | N2—C9—N1—C8 | 62.2 (2) |
| C3—C4—C5—C6 | 0.8 (3) | S1—C9—N1—C8 | −118.74 (15) |
| C2—C1—C6—C5 | 0.4 (2) | N1—C9—N2—C10 | −178.25 (14) |
| C2—C1—C6—C7 | −177.23 (15) | S1—C9—N2—C10 | 2.7 (2) |
| C4—C5—C6—C1 | −1.0 (3) | N1—C9—N2—C12 | 11.9 (2) |
| C4—C5—C6—C7 | 176.60 (17) | S1—C9—N2—C12 | −167.16 (12) |
| C1—C6—C7—C8 | −107.78 (18) | C11—C10—N2—C9 | −88.3 (2) |
| C5—C6—C7—C8 | 74.7 (2) | C11—C10—N2—C12 | 82.5 (2) |
| C6—C7—C8—O1 | −96.5 (2) | C13—C12—N2—C9 | −122.62 (19) |
| C6—C7—C8—N1 | 82.50 (18) | C13—C12—N2—C10 | 67.1 (2) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1'···S1i | 0.86 | 2.69 | 3.404 (3) | 141 |
Symmetry codes: (i) −x+2, −y, −z+2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV2467).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808035290/cv2467sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808035290/cv2467Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


