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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Nov 13;64(Pt 12):o2315. doi: 10.1107/S1600536808035988

Ethyl 2-[4-(benzyloxy)anilino]-4-oxo-4,5-dihydro­furan-3-carboxyl­ate

S Nirmala a, R Murugan b, E Theboral Sugi Kamala a, L Sudha c,*, S Sriman Narayanan b
PMCID: PMC2960036  PMID: 21581291

Abstract

In the title compound, C20H19NO5, the dihydro­furan ring is almost planar [maximum deviation of 0.021 (2)°] and makes dihedral angles of 28.1 (7) and 54.5 (5)° with the benzyl and phenyl­amino rings, respectively. The mol­ecular packing is stabilized by intra­molecular N—H⋯O hydrogen bonds and inter­molecular C—H⋯O inter­actions.

Related literature

For background on the development of effective and tolerable therapeutic options for cervical cancer, see: Huang et al. (2007); Lu et al. (2008). For the analysis of apoptosis induced by dihydro­furan carboxyl­ate compounds, see: Chen et al. (2006); Lin et al. (2006); Zhang & Wei (2007). For bond-length data, see: Allen et al. (1987). For a related structure, see: Erdsack et al. (2007).graphic file with name e-64-o2315-scheme1.jpg

Experimental

Crystal data

  • C20H19NO5

  • M r = 353.36

  • Triclinic, Inline graphic

  • a = 9.1315 (3) Å

  • b = 10.4040 (3) Å

  • c = 11.1162 (4) Å

  • α = 84.848 (2)°

  • β = 66.436 (2)°

  • γ = 64.121 (2)°

  • V = 866.34 (5) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 293 (2) K

  • 0.25 × 0.20 × 0.20 mm

Data collection

  • Bruker Kappa APEXII diffractometer

  • Absorption correction: multi-scan (Blessing, 1995) T min = 0.976, T max = 0.981

  • 22596 measured reflections

  • 5349 independent reflections

  • 3665 reflections with I > 2σ(I)

  • R int = 0.025

Refinement

  • R[F 2 > 2σ(F 2)] = 0.051

  • wR(F 2) = 0.163

  • S = 1.03

  • 5349 reflections

  • 235 parameters

  • H-atom parameters constrained

  • Δρmax = 0.29 e Å−3

  • Δρmin = −0.20 e Å−3

Data collection: APEX2 (Bruker, 2004); cell refinement: APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2003).

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808035988/bq2103sup1.cif

e-64-o2315-sup1.cif (20.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808035988/bq2103Isup2.hkl

e-64-o2315-Isup2.hkl (256.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯O4 0.86 2.12 2.7485 (15) 129
C6—H6⋯O3i 0.93 2.51 3.3951 (18) 160
C17—H17⋯O4ii 0.93 2.58 3.465 (2) 160

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

SN thanks Professor M. N. Ponnuswamy, Department of Crystallography and Biophysics, University of Madras, India, for his guidance and valuable suggestions, and also the Management of SRM, India, for their support.

supplementary crystallographic information

Comment

Human cervical cancer is potentially lethal, and therefore the development of effective and tolerable therapeutic options is vital (Huang et al., 2007; Lu et al., 2008). Dihydrofuran carboxylate compounds induced morphological changes and cytotoxicity in a dose - dependent manner. Dihydrofuran carboxylate compounds induced apoptosis which was analyzed by flow cytometric methods and confirmed by DAPI staining and DNA fragmentation analyzed by DNA gel electrophoresis (Chen et al., 2006; Lin et al., 2006; Zhang & Wei, 2007). In view of this medicinal importance, an X-ray study of the title compound, (I), was carried out.

An ORTEP (Farrugia,1997) plot of the molecule is shown in Fig. 1. The bond lengths in (I) show normal values (Allen et al., 1987) and are comparable to the related structure (Erdsack et al., 2007). The dihydrofuran ring (O2/C1—C4) is planar with a maximum deviation of -0.021 (2)° for C3 from the least square plane defined by all non hydrogen atoms in the molecule. The dihydrofuran ring makes dihedral angles of 28.1 (7)° and 54.5 (5)°, respectively, with the benzyl ring (C12—C17) and phenylamino ring (C5—C10), whereas the benzyl and phenylamino rings are oriented at an angle of 78.6 (6)° with respect to each other.

The crystal structure is stabilized by intramolecular N—H···O interactions. In addition to the van der Waals interactions, the molecular packing in the crystal is also stabilized by intermolecular C—H···O interactions (Table 1, Fig. 2).

Experimental

1.0 mol of 4-(benzyloxy) aniline (1.0 g) and 1.0 mol of ethyl 2-chloro-4- oxo-4,5-dihydrofuran-3-carboxylate (0.9 g) was allowed to stir in 10 ml of dichloromethane which contains 0.5 ml of triethylamine at room temperature for about 8 hrs. The completion of the reaction was monitored by TLC. After the completion of reaction the crude solid was filtered and then recrystallized in ethanol.

Refinement

H atoms were positioned geometrically and were treated as riding on their parent C atoms, with aromatic C—H distances of 0.93 Å, methyl C—H distances of 0.96 Å and methylene C—H distances of 0.97 Å, and with Uiso(H) = 1.5Ueq(C) for methyl H and 1.2Ueq(C) for other H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with 30% probability displacement ellipsoids. Dashed line indicates hydrogen bond.

Fig. 2.

Fig. 2.

The packing of the molecules viewed down the c axis. Dashed lines indicate hydrogen bonds. H atoms not involed in hydrogen bonds have been omitted.

Crystal data

C20H19NO5 Z = 2
Mr = 353.36 F000 = 372
Triclinic, P1 Dx = 1.355 Mg m3
Hall symbol: -P 1 Mo Kα radiation λ = 0.71073 Å
a = 9.1315 (3) Å Cell parameters from 6361 reflections
b = 10.4040 (3) Å θ = 2.6–30.7º
c = 11.1162 (4) Å µ = 0.10 mm1
α = 84.848 (2)º T = 293 (2) K
β = 66.436 (2)º Prism, yellow
γ = 64.121 (2)º 0.25 × 0.20 × 0.20 mm
V = 866.34 (5) Å3

Data collection

Bruker Kappa APEXII diffractometer 5349 independent reflections
Radiation source: fine-focus sealed tube 3665 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.025
T = 293(2) K θmax = 30.7º
Bruker axs (kappa apex2) scans θmin = 2.0º
Absorption correction: multi-scan(Blessing, 1995) h = −13→13
Tmin = 0.976, Tmax = 0.981 k = −14→14
22596 measured reflections l = −15→15

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051 H-atom parameters constrained
wR(F2) = 0.163   w = 1/[σ2(Fo2) + (0.0812P)2 + 0.1488P] where P = (Fo2 + 2Fc2)/3
S = 1.03 (Δ/σ)max < 0.001
5349 reflections Δρmax = 0.29 e Å3
235 parameters Δρmin = −0.20 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 1.26357 (19) 0.57501 (15) 0.0775 (2) 0.0570 (4)
H1A 1.3252 0.5714 0.1323 0.068*
H1B 1.3224 0.6003 −0.0086 0.068*
C2 1.26228 (18) 0.43137 (14) 0.06491 (15) 0.0437 (3)
C3 1.07887 (17) 0.46034 (12) 0.12356 (14) 0.0386 (3)
C4 0.98080 (17) 0.60818 (13) 0.15886 (14) 0.0396 (3)
C5 0.71086 (17) 0.83503 (13) 0.24252 (14) 0.0421 (3)
C6 0.58376 (19) 0.91391 (14) 0.19371 (16) 0.0496 (3)
H6 0.5628 0.8684 0.1383 0.060*
C7 0.4878 (2) 1.06059 (15) 0.22738 (17) 0.0517 (4)
H7 0.4011 1.1138 0.1956 0.062*
C8 0.52074 (18) 1.12851 (14) 0.30861 (15) 0.0447 (3)
C9 0.6476 (2) 1.04905 (15) 0.35756 (16) 0.0515 (4)
H9 0.6699 1.0941 0.4122 0.062*
C10 0.7412 (2) 0.90186 (15) 0.32472 (16) 0.0513 (4)
H10 0.8253 0.8479 0.3587 0.062*
C11 0.4551 (2) 1.34824 (16) 0.41338 (19) 0.0572 (4)
H11A 0.5762 1.3371 0.3698 0.069*
H11B 0.4396 1.3104 0.4983 0.069*
C12 0.3260 (2) 1.50396 (14) 0.43163 (15) 0.0464 (3)
C13 0.1520 (2) 1.54983 (19) 0.51716 (18) 0.0639 (4)
H13 0.1136 1.4836 0.5635 0.077*
C14 0.0329 (3) 1.6920 (2) 0.5359 (2) 0.0798 (6)
H14 −0.0853 1.7216 0.5940 0.096*
C15 0.0884 (3) 1.78924 (19) 0.4692 (3) 0.0816 (7)
H15 0.0083 1.8858 0.4818 0.098*
C16 0.2604 (4) 1.7455 (2) 0.3842 (3) 0.0888 (7)
H16 0.2983 1.8124 0.3390 0.107*
C17 0.3794 (3) 1.6028 (2) 0.3642 (2) 0.0678 (5)
H17 0.4968 1.5734 0.3045 0.081*
C18 0.99189 (18) 0.36906 (13) 0.14162 (14) 0.0416 (3)
C19 1.0226 (3) 0.13250 (17) 0.1330 (3) 0.0729 (6)
H19A 0.9252 0.1571 0.2193 0.088*
H19B 0.9755 0.1409 0.0669 0.088*
C20 1.1542 (3) −0.01258 (19) 0.1230 (3) 0.0969 (8)
H20A 1.1010 −0.0772 0.1362 0.145*
H20B 1.1996 −0.0205 0.1892 0.145*
H20C 1.2498 −0.0367 0.0372 0.145*
N1 0.80732 (15) 0.68332 (11) 0.20754 (13) 0.0465 (3)
H1 0.7456 0.6366 0.2196 0.056*
O1 0.42051 (15) 1.27356 (10) 0.33465 (12) 0.0582 (3)
O2 1.07889 (13) 0.67841 (9) 0.13778 (12) 0.0516 (3)
O3 1.39676 (13) 0.32190 (11) 0.01100 (13) 0.0599 (3)
O4 0.83217 (13) 0.41370 (11) 0.18030 (13) 0.0568 (3)
O5 1.10361 (13) 0.22984 (10) 0.11310 (12) 0.0522 (3)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0359 (7) 0.0384 (7) 0.0945 (12) −0.0144 (6) −0.0230 (7) −0.0096 (7)
C2 0.0369 (6) 0.0328 (6) 0.0618 (8) −0.0125 (5) −0.0221 (6) −0.0017 (5)
C3 0.0350 (6) 0.0269 (5) 0.0514 (7) −0.0118 (4) −0.0164 (5) 0.0010 (5)
C4 0.0365 (6) 0.0293 (5) 0.0512 (7) −0.0138 (5) −0.0161 (5) 0.0010 (5)
C5 0.0329 (6) 0.0283 (5) 0.0550 (8) −0.0099 (5) −0.0111 (5) −0.0017 (5)
C6 0.0440 (7) 0.0350 (6) 0.0669 (9) −0.0108 (6) −0.0241 (7) −0.0080 (6)
C7 0.0477 (8) 0.0345 (6) 0.0683 (10) −0.0062 (6) −0.0297 (7) −0.0062 (6)
C8 0.0396 (7) 0.0313 (6) 0.0531 (8) −0.0074 (5) −0.0159 (6) −0.0064 (5)
C9 0.0499 (8) 0.0383 (7) 0.0627 (9) −0.0108 (6) −0.0261 (7) −0.0081 (6)
C10 0.0473 (8) 0.0365 (7) 0.0638 (9) −0.0073 (6) −0.0275 (7) −0.0013 (6)
C11 0.0551 (9) 0.0374 (7) 0.0748 (11) −0.0102 (6) −0.0299 (8) −0.0108 (7)
C12 0.0490 (8) 0.0342 (6) 0.0518 (8) −0.0126 (6) −0.0204 (6) −0.0068 (5)
C13 0.0594 (10) 0.0494 (9) 0.0610 (10) −0.0147 (8) −0.0135 (8) 0.0040 (7)
C14 0.0601 (11) 0.0616 (11) 0.0776 (13) 0.0030 (9) −0.0178 (10) −0.0184 (10)
C15 0.0951 (16) 0.0345 (8) 0.1246 (18) −0.0077 (9) −0.0732 (15) −0.0061 (10)
C16 0.1034 (18) 0.0548 (11) 0.144 (2) −0.0476 (12) −0.0750 (17) 0.0374 (12)
C17 0.0592 (10) 0.0604 (10) 0.0887 (13) −0.0320 (9) −0.0288 (10) 0.0112 (9)
C18 0.0398 (7) 0.0289 (5) 0.0547 (8) −0.0148 (5) −0.0179 (6) 0.0041 (5)
C19 0.0681 (11) 0.0381 (8) 0.1251 (17) −0.0328 (8) −0.0411 (11) 0.0130 (9)
C20 0.0866 (15) 0.0382 (9) 0.163 (3) −0.0326 (10) −0.0444 (16) 0.0207 (12)
N1 0.0357 (6) 0.0280 (5) 0.0686 (8) −0.0124 (4) −0.0146 (5) −0.0015 (5)
O1 0.0597 (7) 0.0308 (5) 0.0779 (8) −0.0033 (4) −0.0362 (6) −0.0140 (5)
O2 0.0383 (5) 0.0299 (4) 0.0823 (8) −0.0144 (4) −0.0185 (5) −0.0058 (4)
O3 0.0359 (5) 0.0388 (5) 0.0931 (9) −0.0083 (4) −0.0198 (5) −0.0128 (5)
O4 0.0388 (5) 0.0388 (5) 0.0878 (8) −0.0184 (4) −0.0185 (5) 0.0037 (5)
O5 0.0450 (5) 0.0266 (4) 0.0821 (8) −0.0160 (4) −0.0215 (5) 0.0018 (4)

Geometric parameters (Å, °)

C1—O2 1.4466 (17) C11—H11A 0.9700
C1—C2 1.5190 (19) C11—H11B 0.9700
C1—H1A 0.9700 C12—C17 1.365 (2)
C1—H1B 0.9700 C12—C13 1.367 (2)
C2—O3 1.2156 (16) C13—C14 1.373 (2)
C2—C3 1.4291 (19) C13—H13 0.9300
C3—C4 1.3953 (16) C14—C15 1.357 (3)
C3—C18 1.4386 (17) C14—H14 0.9300
C4—N1 1.3126 (17) C15—C16 1.354 (4)
C4—O2 1.3281 (15) C15—H15 0.9300
C5—C10 1.371 (2) C16—C17 1.376 (3)
C5—C6 1.381 (2) C16—H16 0.9300
C5—N1 1.4287 (15) C17—H17 0.9300
C6—C7 1.3820 (18) C18—O4 1.2128 (17)
C6—H6 0.9300 C18—O5 1.3316 (15)
C7—C8 1.387 (2) C19—C20 1.441 (3)
C7—H7 0.9300 C19—O5 1.4506 (17)
C8—O1 1.3637 (15) C19—H19A 0.9700
C8—C9 1.381 (2) C19—H19B 0.9700
C9—C10 1.3847 (19) C20—H20A 0.9600
C9—H9 0.9300 C20—H20B 0.9600
C10—H10 0.9300 C20—H20C 0.9600
C11—O1 1.4238 (18) N1—H1 0.8600
C11—C12 1.5022 (19)
O2—C1—C2 105.83 (11) C17—C12—C13 118.54 (15)
O2—C1—H1A 110.6 C17—C12—C11 121.00 (15)
C2—C1—H1A 110.6 C13—C12—C11 120.46 (15)
O2—C1—H1B 110.6 C12—C13—C14 121.09 (18)
C2—C1—H1B 110.6 C12—C13—H13 119.5
H1A—C1—H1B 108.7 C14—C13—H13 119.5
O3—C2—C3 131.81 (12) C15—C14—C13 119.7 (2)
O3—C2—C1 122.98 (13) C15—C14—H14 120.1
C3—C2—C1 105.18 (11) C13—C14—H14 120.1
C4—C3—C2 106.96 (11) C16—C15—C14 119.92 (17)
C4—C3—C18 121.03 (12) C16—C15—H15 120.0
C2—C3—C18 131.90 (11) C14—C15—H15 120.0
N1—C4—O2 117.79 (11) C15—C16—C17 120.4 (2)
N1—C4—C3 127.88 (12) C15—C16—H16 119.8
O2—C4—C3 114.33 (11) C17—C16—H16 119.8
C10—C5—C6 120.12 (12) C12—C17—C16 120.32 (19)
C10—C5—N1 120.95 (13) C12—C17—H17 119.8
C6—C5—N1 118.92 (13) C16—C17—H17 119.8
C5—C6—C7 119.82 (13) O4—C18—O5 122.88 (12)
C5—C6—H6 120.1 O4—C18—C3 123.59 (12)
C7—C6—H6 120.1 O5—C18—C3 113.52 (11)
C6—C7—C8 120.03 (14) C20—C19—O5 109.29 (15)
C6—C7—H7 120.0 C20—C19—H19A 109.8
C8—C7—H7 120.0 O5—C19—H19A 109.8
O1—C8—C9 124.60 (13) C20—C19—H19B 109.8
O1—C8—C7 115.48 (13) O5—C19—H19B 109.8
C9—C8—C7 119.92 (12) H19A—C19—H19B 108.3
C8—C9—C10 119.57 (14) C19—C20—H20A 109.5
C8—C9—H9 120.2 C19—C20—H20B 109.5
C10—C9—H9 120.2 H20A—C20—H20B 109.5
C5—C10—C9 120.52 (14) C19—C20—H20C 109.5
C5—C10—H10 119.7 H20A—C20—H20C 109.5
C9—C10—H10 119.7 H20B—C20—H20C 109.5
O1—C11—C12 107.46 (12) C4—N1—C5 126.48 (11)
O1—C11—H11A 110.2 C4—N1—H1 116.8
C12—C11—H11A 110.2 C5—N1—H1 116.8
O1—C11—H11B 110.2 C8—O1—C11 117.26 (12)
C12—C11—H11B 110.2 C4—O2—C1 107.56 (10)
H11A—C11—H11B 108.5 C18—O5—C19 115.87 (12)
O2—C1—C2—O3 175.75 (15) C12—C13—C14—C15 −0.4 (3)
O2—C1—C2—C3 −2.44 (18) C13—C14—C15—C16 0.3 (3)
O3—C2—C3—C4 −174.22 (17) C14—C15—C16—C17 0.4 (4)
C1—C2—C3—C4 3.74 (17) C13—C12—C17—C16 1.0 (3)
O3—C2—C3—C18 1.9 (3) C11—C12—C17—C16 −178.56 (18)
C1—C2—C3—C18 179.84 (16) C15—C16—C17—C12 −1.1 (3)
C2—C3—C4—N1 174.99 (15) C4—C3—C18—O4 4.4 (2)
C18—C3—C4—N1 −1.6 (2) C2—C3—C18—O4 −171.19 (16)
C2—C3—C4—O2 −4.03 (17) C4—C3—C18—O5 −174.86 (13)
C18—C3—C4—O2 179.36 (13) C2—C3—C18—O5 9.5 (2)
C10—C5—C6—C7 0.3 (2) O2—C4—N1—C5 −0.9 (2)
N1—C5—C6—C7 179.38 (14) C3—C4—N1—C5 −179.88 (14)
C5—C6—C7—C8 0.8 (2) C10—C5—N1—C4 −52.3 (2)
C6—C7—C8—O1 179.24 (15) C6—C5—N1—C4 128.62 (17)
C6—C7—C8—C9 −1.1 (2) C9—C8—O1—C11 2.8 (2)
O1—C8—C9—C10 179.81 (15) C7—C8—O1—C11 −177.55 (15)
C7—C8—C9—C10 0.1 (3) C12—C11—O1—C8 −178.33 (13)
C6—C5—C10—C9 −1.3 (2) N1—C4—O2—C1 −176.74 (14)
N1—C5—C10—C9 179.71 (14) C3—C4—O2—C1 2.39 (18)
C8—C9—C10—C5 1.0 (3) C2—C1—O2—C4 0.15 (18)
O1—C11—C12—C17 −104.90 (19) O4—C18—O5—C19 −0.9 (2)
O1—C11—C12—C13 75.5 (2) C3—C18—O5—C19 178.40 (16)
C17—C12—C13—C14 −0.3 (3) C20—C19—O5—C18 −168.96 (18)
C11—C12—C13—C14 179.31 (17)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1···O4 0.86 2.12 2.7485 (15) 129
C6—H6···O3i 0.93 2.51 3.3951 (18) 160
C17—H17···O4ii 0.93 2.58 3.465 (2) 160

Symmetry codes: (i) −x+2, −y+1, −z; (ii) x, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BQ2103).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808035988/bq2103sup1.cif

e-64-o2315-sup1.cif (20.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808035988/bq2103Isup2.hkl

e-64-o2315-Isup2.hkl (256.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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