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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Nov 20;64(Pt 12):o2376. doi: 10.1107/S160053680803701X

N,N-Dimethyl­acetamide–4-iodo­benzene­sulfonic acid–water (1/1/1)

Rui Liu a, Yu-Feng Li a, Wei Luo a, Jin Chang a, Hong-Jun Zhu a,*
PMCID: PMC2960060  PMID: 21581348

Abstract

In the title compound, C6H5IO3S·C4H9NO·H2O, N,N-dimethylacetamide and 4-iodobenzenesulfonic acidmolecules are linked by an intramolecular C—H⋯O hydrogen bond. In the crystal structure, inter­molecular O—H⋯O, O—H⋯I and C—H⋯O hydrogen bonds link the mol­ecules.

Related literature

For a related structure, see: Wu et al. (2000). For bond-length data, see: Allen et al. (1987).graphic file with name e-64-o2376-scheme1.jpg

Experimental

Crystal data

  • C6H5IO3S·C4H9NO·H2O

  • M r = 389.21

  • Orthorhombic, Inline graphic

  • a = 14.173 (3) Å

  • b = 7.7480 (15) Å

  • c = 13.272 (3) Å

  • V = 1457.4 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 2.35 mm−1

  • T = 294 (2) K

  • 0.30 × 0.20 × 0.10 mm

Data collection

  • Enraf–Nonius CAD-4 diffractometer

  • Absorption correction: ψ scan (North et al., 1968) T min = 0.539, T max = 0.799

  • 1490 measured reflections

  • 1490 independent reflections

  • 1096 reflections with I > 2σ(I)

  • 3 standard reflections frequency: 120 min intensity decay: none

Refinement

  • R[F 2 > 2σ(F 2)] = 0.063

  • wR(F 2) = 0.162

  • S = 1.07

  • 1490 reflections

  • 172 parameters

  • 4 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 1.53 e Å−3

  • Δρmin = −2.42 e Å−3

  • Absolute structure: Flack (1983), 7 Friedel pairs

  • Flack parameter: 0.13 (10)

Data collection: CAD-4 Software (Enraf–Nonius, 1985); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680803701X/hk2535sup1.cif

e-64-o2376-sup1.cif (17.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053680803701X/hk2535Isup2.hkl

e-64-o2376-Isup2.hkl (73.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O1W—H1WA⋯O2i 0.87 (13) 1.97 (15) 2.765 (16) 151 (14)
O1W—H1WB⋯O3ii 0.94 (10) 1.85 (15) 2.657 (16) 143 (17)
O2—H2A⋯I1iii 0.85 2.57 3.208 (16) 133
C1—H1B⋯O3iv 0.93 2.46 3.378 (15) 168
C5—H5A⋯O1v 0.93 2.55 3.192 (17) 126
C9—H9A⋯O3 0.96 2.56 3.48 (2) 161

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic; (v) Inline graphic.

Acknowledgments

The authors thank the Center of Testing and Analysis, Nanjing University, for support.

supplementary crystallographic information

Comment

The crystal structure of the title compound with a comb-like structure illustrate the three different components linked by weak interactions based on hydrogen bonds. Furthermore, the hydrolysis mechanism of the innersalt, which was formed from 4-iodobenzenesulfonyl chloride and N,N-dimethylacetamide, was understood (Wu et al., 2000). Meanwhile, the complicated hydrolysate was finally confirmed. We report herein its crystal structure.

The asymmetric unit of the title compound contains N,N-dimethylacetamide, 4-iodobenzenesulfonic acid and water molecules (Fig. 1), in which the bond lengths (Allen et al., 1987) and angles are within normal ranges. Ring A (C1-C6) is, of course, planar. The intramolecular C-H···O hydrogen bonds (Table 1) result in the formation of two nonplanar five-membered rings B (S/O1/C2/C3/H2B) and C (O4/N1/C8/C10/H8A), having envelope conformations with O1 and H8A atoms displaced by 0.193 (3) and 0.194 (3) Å, respectively, from the planes of the other ring atoms.

In the crystal structure, intermolecular O-H···O, O-H···I and C-H···O hydrogen bonds link the molecules (Fig. 2), in which they may be effective in the stabilization of the structure. As can be seen from the packing diagram (Fig. 3), the molecules are stacked along the b axis. The comb-like structure depends on C-H···O hydrogen bonds. The 4-iodobenzenesulfonic acid molecules constitute the main chain and the N,N-dimethylacetamide molecules intermesh to each other as the branches.

Experimental

Addition of N,N-dimethylacetamide (1.8 ml, 0.02 mol) into 4-iodobenzenesulfonyl chloride (6.1 g, 0.02 mol) gave milk-white solution of innersalt (Wu et al., 2000). The innersalt was dissolved in acetone (20 ml) and placed in moist chamber to crystallize. The crystals were obtained by evaporating solvent slowly at room temperature for about 40 d.

Refinement

Water H atoms were located in difference syntheses and refined as [O-H = 0.88 (9) Å and 0.94 (9) Å; Uiso(H) = 0.093 Å2]. The remaining H atoms were positioned geometrically, with O-H = 0.85 Å (for OH) and C-H = 0.93 and 0.96 Å for aromatic and methyl H, respectively, and constrained to ride on their parent atoms with Uiso(H) = xUeq(C,O), where x = 1.5 for methyl H and x = 1.2 for all other H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen bonds are shown as dashed lines.

Fig. 2.

Fig. 2.

A packing diagram of the title compound. Hydrogen bonds are shown as dashed lines.

Fig. 3.

Fig. 3.

A packing diagram of the title compound, showing the formation of the supramolecular comb-like structure. For the sake of clarity, water molecules have been omitted.

Crystal data

C6H5IO3S·C4H9NO·H2O Dx = 1.774 Mg m3
Mr = 389.21 Melting point: 363 K
Orthorhombic, Pca21 Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2c -2ac Cell parameters from 25 reflections
a = 14.173 (3) Å θ = 10–13º
b = 7.7480 (15) Å µ = 2.35 mm1
c = 13.272 (3) Å T = 294 (2) K
V = 1457.4 (5) Å3 Block, colorless
Z = 4 0.30 × 0.20 × 0.10 mm
F000 = 768

Data collection

Enraf–Nonius CAD-4 diffractometer Rint = 0.0000
Radiation source: fine-focus sealed tube θmax = 25.9º
Monochromator: graphite θmin = 2.6º
T = 294(2) K h = 0→17
ω/2θ scans k = 0→9
Absorption correction: ψ scan(North et al., 1968) l = 0→16
Tmin = 0.539, Tmax = 0.799 3 standard reflections
1490 measured reflections every 120 min
1490 independent reflections intensity decay: none
1096 reflections with I > 2σ(I)

Refinement

Refinement on F2 Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: full H atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.063   w = 1/[σ2(Fo2) + (0.1045P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.162 (Δ/σ)max < 0.001
S = 1.07 Δρmax = 1.53 e Å3
1490 reflections Δρmin = −2.42 e Å3
172 parameters Extinction correction: none
4 restraints Absolute structure: Flack (1983), 7 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: 0.13 (10)
Secondary atom site location: difference Fourier map

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
I1 0.20688 (5) 0.25040 (11) 0.7328 (2) 0.0505 (3)
S 0.1876 (2) 0.9056 (4) 1.0531 (3) 0.0438 (8)
O1W 0.9586 (8) 0.1582 (19) 0.0789 (10) 0.077 (4)
H1WA 0.914 (10) 0.084 (19) 0.065 (17) 0.093*
H1WB 1.023 (7) 0.13 (2) 0.082 (15) 0.093*
O1 0.1588 (10) 0.8396 (14) 1.1505 (8) 0.076 (4)
O2 0.2802 (7) 0.9782 (15) 1.0512 (14) 0.094 (5)
H2A 0.2768 1.0848 1.0659 0.113*
O3 0.1189 (8) 1.0230 (11) 1.0115 (8) 0.053 (2)
O4 −0.0108 (7) 0.6431 (14) 0.7131 (8) 0.060 (3)
N1 −0.0502 (9) 0.597 (2) 0.8736 (12) 0.070 (4)
C1 0.1840 (9) 0.4229 (16) 0.9376 (10) 0.041 (3)
H1B 0.1756 0.3110 0.9613 0.050*
C2 0.1806 (9) 0.5632 (16) 1.0022 (10) 0.043 (3)
H2B 0.1709 0.5450 1.0706 0.051*
C3 0.1912 (8) 0.7263 (14) 0.9674 (11) 0.034 (3)
C4 0.2059 (8) 0.7609 (14) 0.8682 (12) 0.038 (3)
H4A 0.2132 0.8741 0.8461 0.046*
C5 0.2100 (8) 0.6222 (17) 0.7992 (10) 0.044 (3)
H5A 0.2188 0.6412 0.7306 0.053*
C6 0.2002 (8) 0.4547 (15) 0.8381 (10) 0.038 (3)
C7 −0.0714 (13) 0.648 (3) 0.9756 (12) 0.078 (5)
H7A −0.1176 0.7386 0.9748 0.117*
H7B −0.0149 0.6890 1.0076 0.117*
H7C −0.0956 0.5509 1.0121 0.117*
C8 −0.0515 (12) 0.407 (2) 0.8500 (15) 0.073 (5)
H8A −0.0490 0.3903 0.7784 0.110*
H8B −0.1084 0.3562 0.8760 0.110*
H8C 0.0020 0.3519 0.8808 0.110*
C9 −0.0327 (13) 0.897 (2) 0.8184 (15) 0.072 (5)
H9A 0.0203 0.9300 0.8590 0.107*
H9B −0.0901 0.9276 0.8522 0.107*
H9C −0.0296 0.9548 0.7546 0.107*
C10 −0.0305 (12) 0.705 (2) 0.8017 (15) 0.062 (4)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
I1 0.0651 (5) 0.0364 (4) 0.0499 (5) 0.0024 (4) −0.0001 (8) −0.0136 (4)
S 0.0544 (17) 0.0296 (14) 0.0473 (17) 0.0041 (14) −0.0096 (18) −0.0142 (15)
O1W 0.054 (6) 0.103 (10) 0.075 (9) 0.002 (7) 0.005 (6) −0.025 (8)
O1 0.141 (11) 0.047 (6) 0.039 (6) 0.028 (7) 0.002 (6) −0.003 (5)
O2 0.076 (8) 0.059 (7) 0.147 (13) 0.004 (6) −0.020 (9) −0.062 (9)
O3 0.062 (6) 0.035 (5) 0.060 (6) 0.008 (4) −0.006 (5) −0.011 (4)
O4 0.065 (6) 0.060 (6) 0.055 (7) 0.006 (5) 0.000 (5) 0.001 (6)
N1 0.052 (8) 0.083 (10) 0.074 (10) −0.008 (8) −0.016 (7) 0.003 (9)
C1 0.057 (7) 0.024 (6) 0.043 (7) −0.009 (6) 0.001 (6) 0.000 (5)
C2 0.064 (8) 0.034 (7) 0.030 (6) 0.003 (6) −0.006 (6) 0.003 (6)
C3 0.031 (6) 0.025 (6) 0.045 (7) 0.004 (5) −0.002 (5) −0.006 (5)
C4 0.049 (7) 0.017 (5) 0.048 (8) −0.001 (5) 0.000 (6) −0.003 (5)
C5 0.051 (8) 0.042 (7) 0.039 (7) 0.006 (6) −0.004 (6) −0.003 (6)
C6 0.049 (7) 0.024 (6) 0.041 (7) −0.002 (5) −0.002 (6) −0.006 (6)
C7 0.082 (12) 0.101 (15) 0.051 (10) −0.005 (11) 0.018 (9) −0.004 (10)
C8 0.061 (10) 0.070 (11) 0.089 (13) −0.011 (9) 0.000 (9) 0.008 (11)
C9 0.078 (12) 0.079 (13) 0.059 (10) 0.013 (9) −0.012 (9) −0.017 (10)
C10 0.060 (10) 0.060 (10) 0.066 (11) −0.002 (8) −0.018 (9) 0.009 (9)

Geometric parameters (Å, °)

I1—C6 2.113 (12) C2—H2B 0.9300
S—O2 1.429 (11) C3—C4 1.36 (2)
S—O3 1.441 (10) C4—C5 1.413 (18)
S—O1 1.449 (12) C4—H4A 0.9300
S—C3 1.796 (12) C5—C6 1.404 (18)
O1W—H1WA 0.88 (9) C5—H5A 0.9300
O1W—H1WB 0.94 (9) C7—H7A 0.9600
O2—H2A 0.8500 C7—H7B 0.9600
O4—C10 1.30 (2) C7—H7C 0.9600
N1—C10 1.30 (2) C8—H8A 0.9600
N1—C7 1.44 (2) C8—H8B 0.9600
N1—C8 1.51 (2) C8—H8C 0.9600
C1—C6 1.363 (19) C9—C10 1.50 (2)
C1—C2 1.386 (17) C9—H9A 0.9600
C1—H1B 0.9300 C9—H9B 0.9600
C2—C3 1.354 (17) C9—H9C 0.9600
O2—S—O3 111.4 (8) C4—C5—H5A 121.3
O2—S—O1 114.4 (9) C1—C6—C5 122.7 (12)
O3—S—O1 112.0 (7) C1—C6—I1 120.8 (9)
O2—S—C3 105.5 (6) C5—C6—I1 116.4 (9)
O3—S—C3 105.3 (6) N1—C7—H7A 109.5
O1—S—C3 107.5 (7) N1—C7—H7B 109.5
H1WA—O1W—H1WB 125 (10) H7A—C7—H7B 109.5
S—O2—H2A 109.0 N1—C7—H7C 109.5
C10—N1—C7 123.8 (18) H7A—C7—H7C 109.5
C10—N1—C8 118.8 (16) H7B—C7—H7C 109.5
C7—N1—C8 117.5 (17) N1—C8—H8A 109.5
C6—C1—C2 117.6 (12) N1—C8—H8B 109.5
C6—C1—H1B 121.2 H8A—C8—H8B 109.5
C2—C1—H1B 121.2 N1—C8—H8C 109.5
C3—C2—C1 121.2 (13) H8A—C8—H8C 109.5
C3—C2—H2B 119.4 H8B—C8—H8C 109.5
C1—C2—H2B 119.4 C10—C9—H9A 109.5
C2—C3—C4 122.1 (12) C10—C9—H9B 109.5
C2—C3—S 120.2 (11) H9A—C9—H9B 109.5
C4—C3—S 117.7 (9) C10—C9—H9C 109.5
C3—C4—C5 118.9 (11) H9A—C9—H9C 109.5
C3—C4—H4A 120.5 H9B—C9—H9C 109.5
C5—C4—H4A 120.5 O4—C10—N1 118.1 (16)
C6—C5—C4 117.5 (13) O4—C10—C9 120.3 (16)
C6—C5—H5A 121.3 N1—C10—C9 121.7 (19)
C6—C1—C2—C3 1(2) S—C3—C4—C5 179.4 (8)
C1—C2—C3—C4 0(2) C3—C4—C5—C6 −1.2 (17)
C1—C2—C3—S −179.4 (10) C2—C1—C6—C5 −2(2)
O2—S—C3—C2 114.1 (12) C2—C1—C6—I1 180.0 (9)
O3—S—C3—C2 −127.9 (11) C4—C5—C6—C1 2.3 (18)
O1—S—C3—C2 −8.3 (13) C4—C5—C6—I1 −179.9 (8)
O2—S—C3—C4 −65.0 (13) C7—N1—C10—O4 178.7 (14)
O3—S—C3—C4 52.9 (11) C8—N1—C10—O4 −1(2)
O1—S—C3—C4 172.5 (10) C7—N1—C10—C9 −3(3)
C2—C3—C4—C5 0.3 (19) C8—N1—C10—C9 176.9 (14)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O1W—H1WA···O2i 0.87 (13) 1.97 (15) 2.765 (16) 151 (14)
O1W—H1WB···O3ii 0.94 (10) 1.85 (15) 2.657 (16) 143 (17)
O2—H2A···I1iii 0.85 2.57 3.208 (16) 133
C1—H1B···O3iv 0.93 2.46 3.378 (15) 168
C2—H2B···O1 0.93 2.52 2.925 (17) 106
C5—H5A···O1v 0.93 2.55 3.192 (17) 126
C8—H8A···O4 0.96 2.21 2.64 (2) 106
C9—H9A···O3 0.96 2.56 3.48 (2) 161

Symmetry codes: (i) x+1/2, −y+1, z−1; (ii) x+1, y−1, z−1; (iii) −x+1/2, y+1, z+1/2; (iv) x, y−1, z; (v) −x+1/2, y, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HK2535).

References

  1. Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
  2. Enraf–Nonius (1985). CAD-4 Software Enraf–Nonius, Delft, The Netherlands.
  3. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
  4. Harms, K. & Wocadlo, S. (1995). XCAD4 University of Marburg, Germany.
  5. North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Spek, A. L. (2003). J. Appl. Cryst.36, 7–13.
  8. Wu, J. S., Chi, C. Y., Wang, X. H., Li, J., Zhao, X. J. & Wang, F. S. (2000). Synth. Commun 30, 4293–4298.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680803701X/hk2535sup1.cif

e-64-o2376-sup1.cif (17.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053680803701X/hk2535Isup2.hkl

e-64-o2376-Isup2.hkl (73.5KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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