Abstract
In the title molecule, C15H17IO4S, the O atom and the methyl group of the methylsulfinyl substituent lie on opposite sides of the plane of the benzofuran fragment. In the crystal structure, intermolecular I⋯O [2.994 (3) Å] halogen bonding links the molecules into centrosymmetric dimers, which are further packed into ribbons along the c axis by intermolecular sulfinyl–sulfinyl interactions [S⋯O 3.128 (3) Å].
Related literature
For the crystal structures of similar isopropyl 2-(3-methylsulfinyl-1-benzofuran-2-yl)acetate derivatives, see Choi et al. (2008a
▶,b
▶). For a review of halogen bonding, see Politzer et al. (2007 ▶). For a review of carbonyl–carbonyl interactions, see Allen et al. (1998 ▶).
Experimental
Crystal data
C15H17IO4S
M r = 420.25
Monoclinic,
a = 17.615 (2) Å
b = 10.0905 (7) Å
c = 19.144 (1) Å
β = 99.177 (2)°
V = 3359.2 (5) Å3
Z = 8
Mo Kα radiation
μ = 2.04 mm−1
T = 298 (2) K
0.40 × 0.30 × 0.20 mm
Data collection
Bruker SMART CCD diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1999 ▶) T min = 0.480, T max = 0.667
6667 measured reflections
2897 independent reflections
2172 reflections with I > 2σ(I)
R int = 0.030
Refinement
R[F 2 > 2σ(F 2)] = 0.033
wR(F 2) = 0.064
S = 1.24
2897 reflections
192 parameters
H-atom parameters constrained
Δρmax = 0.48 e Å−3
Δρmin = −0.37 e Å−3
Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808038671/cv2478sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808038671/cv2478Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Selected interatomic distances (Å).
| I⋯O4i | 2.994 (3) |
| S⋯O4ii | 3.128 (3) |
Symmetry codes: (i)
; (ii)
.
supplementary crystallographic information
Comment
This work is related to our previous communications on the synthesis and structure of isopropyl 2-(3-methylsulfinyl-1-benzofuran-2-yl)acetate analogues, viz. isopropyl 2-(5-methyl-3-methylsulfinyl-1-benzofuran-2-yl)acetate (Choi et al., 2008a) and isopropyl 2-(5-bromo-3-methylsulfinyl-1-benzofuran-2-yl)acetate (Choi et al., 2008b). Here we report the crystal structure of the title compound, isopropyl 2-(5-iodo-7-methyl-3-methylsulfinyl-1-benzofuran-2-yl)acetate (Fig. 1).
The benzofuran unit is essentially planar, with a mean deviation of 0.030 (3) Å from the least-squares plane defined by the nine constituent atoms. The molecular packing (Fig. 2) is stabilized by intermolecular I···O halogen bonding (Politzer et al., 2007) of 2.994 (3) Å and a nearly linear C—I···O angle of 168.51 (9)°, which link the molecules into centrosymmetric dimers (Table 1). These dimers are further packed into ribbons along the c axis by sulfinyl–sulfinyl interactions (Table 1) interpreted as simliar to a type–II carbonyl–carbonyl interaction (Allen et al., 1998).
Experimental
77% 3-Chloroperoxybenzoic acid (123 mg, 0.55 mmol) was added in small portions to a stirred solution of isopropyl 2-(5-iodo-7-methyl-3-methylsulfanyl-1-benzofuran-2-yl)acetate (202 mg, 0.5 mmol) in dichloromethane (30 ml) at 273 K. After being stirred for 3 h at room temperature, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated in vacuum. The residue was purified by column chromatography (ethyl acetate) to afford the title compound as a colorless solid [yield 81%, m.p. 396-397 K; Rf = 0.74 (ethyl acetate)]. Single crystals suitable for X-ray diffraction were prepared by evaporation of a solution of the title compound in acetone at room temperature. Spectroscopic analysis: 1H NMR (CDCl3, 400 MHz) δ 1.27 (d, J = 6.24 Hz, 6H), 2.46 (s, 3H), 3.06 (s, 3H), 4.00 (s, 2H), 5.03-5.09 (m, 1H), 7.49 (s, 1H), 8.10 (s, 1H); EI-MS 420 [M+].
Refinement
All H atoms were geometrically positioned and refined using a riding model, with C—H = 0.93 Å for the aryl, 0.97 Å for the methylene, 0.98 Å for the methine, and 0.96 Å for the methyl H atoms. Uiso(H) = 1.2Ueq(C) for the aryl, methine and methylene H atoms, and 1.5Ueq(C) for methyl H atoms.
Figures
Fig. 1.
The molecular structure of the title compound, showing displacement ellipsoids drawn at the 30% probability level.
Fig. 2.
A portion of the crystal packing showing the I···O halogen bonding and S···O interactions by dotted lines [symmetry codes: (i) -x+1, -y+1, -z; (ii) -x+1, y, -z+1/2; (iii) x, -y+1, z-1/2].
Crystal data
| C15H17IO4S | F000 = 1664 |
| Mr = 420.25 | Dx = 1.662 Mg m−3 |
| Monoclinic, C2/c | Melting point = 420–421 K |
| Hall symbol: -C 2yc | Mo Kα radiation λ = 0.71073 Å |
| a = 17.615 (2) Å | Cell parameters from 5394 reflections |
| b = 10.0905 (7) Å | θ = 2.2–28.1º |
| c = 19.144 (1) Å | µ = 2.04 mm−1 |
| β = 99.177 (2)º | T = 298 (2) K |
| V = 3359.2 (5) Å3 | Block, colourless |
| Z = 8 | 0.40 × 0.30 × 0.20 mm |
Data collection
| Bruker SMART CCD diffractometer | 2897 independent reflections |
| Radiation source: fine-focus sealed tube | 2172 reflections with I > 2σ(I) |
| Monochromator: graphite | Rint = 0.030 |
| Detector resolution: 10.0 pixels mm-1 | θmax = 26.0º |
| T = 298(2) K | θmin = 2.5º |
| φ and ω scans | h = −12→21 |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1999) | k = −12→12 |
| Tmin = 0.480, Tmax = 0.667 | l = −23→23 |
| 6667 measured reflections |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.033 | H-atom parameters constrained |
| wR(F2) = 0.064 | w = 1/[σ2(Fo2)] |
| S = 1.24 | (Δ/σ)max < 0.001 |
| 2897 reflections | Δρmax = 0.49 e Å−3 |
| 192 parameters | Δρmin = −0.37 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| I | 0.513353 (18) | 0.743648 (18) | −0.024404 (13) | 0.04774 (10) | |
| S | 0.60070 (6) | 0.34161 (6) | 0.23510 (5) | 0.0450 (2) | |
| O1 | 0.61238 (16) | 0.71392 (18) | 0.29955 (13) | 0.0445 (7) | |
| O2 | 0.71791 (17) | 0.4874 (2) | 0.48324 (13) | 0.0503 (7) | |
| O3 | 0.7643 (2) | 0.5249 (3) | 0.38247 (15) | 0.0783 (10) | |
| O4 | 0.53494 (17) | 0.3086 (2) | 0.17899 (13) | 0.0554 (7) | |
| C1 | 0.6014 (2) | 0.5163 (3) | 0.24557 (19) | 0.0408 (9) | |
| C2 | 0.5868 (2) | 0.6160 (2) | 0.19074 (19) | 0.0382 (9) | |
| C3 | 0.5656 (2) | 0.6170 (3) | 0.11784 (18) | 0.0389 (9) | |
| H3 | 0.5604 | 0.5386 | 0.0920 | 0.047* | |
| C4 | 0.5524 (2) | 0.7395 (2) | 0.0848 (2) | 0.0394 (8) | |
| C5 | 0.5640 (2) | 0.8584 (3) | 0.12417 (19) | 0.0430 (9) | |
| H5 | 0.5567 | 0.9388 | 0.1003 | 0.052* | |
| C6 | 0.5853 (2) | 0.8597 (3) | 0.19600 (19) | 0.0414 (9) | |
| C7 | 0.5950 (2) | 0.7356 (2) | 0.2277 (2) | 0.0385 (8) | |
| C8 | 0.6142 (2) | 0.5781 (3) | 0.30852 (19) | 0.0409 (9) | |
| C9 | 0.6276 (2) | 0.5310 (3) | 0.3828 (2) | 0.0470 (10) | |
| H9A | 0.6021 | 0.4463 | 0.3851 | 0.056* | |
| H9B | 0.6042 | 0.5932 | 0.4116 | 0.056* | |
| C10 | 0.7106 (3) | 0.5155 (3) | 0.4138 (2) | 0.0452 (10) | |
| C11 | 0.7939 (3) | 0.4653 (4) | 0.5226 (2) | 0.0575 (11) | |
| H11 | 0.8262 | 0.4217 | 0.4922 | 0.069* | |
| C12 | 0.7830 (3) | 0.3742 (4) | 0.5829 (2) | 0.0690 (13) | |
| H12A | 0.7593 | 0.2933 | 0.5642 | 0.083* | |
| H12B | 0.7507 | 0.4166 | 0.6121 | 0.083* | |
| H12C | 0.8321 | 0.3548 | 0.6106 | 0.083* | |
| C13 | 0.8288 (3) | 0.5958 (5) | 0.5478 (3) | 0.0918 (17) | |
| H13A | 0.7971 | 0.6382 | 0.5775 | 0.110* | |
| H13B | 0.8325 | 0.6513 | 0.5077 | 0.110* | |
| H13C | 0.8792 | 0.5813 | 0.5741 | 0.110* | |
| C14 | 0.5999 (3) | 0.9856 (3) | 0.2391 (2) | 0.0615 (12) | |
| H14A | 0.5901 | 0.9698 | 0.2863 | 0.092* | |
| H14B | 0.5664 | 1.0544 | 0.2176 | 0.092* | |
| H14C | 0.6525 | 1.0125 | 0.2407 | 0.092* | |
| C15 | 0.6855 (3) | 0.3293 (4) | 0.1950 (3) | 0.0887 (19) | |
| H15A | 0.6947 | 0.2381 | 0.1848 | 0.133* | |
| H15B | 0.7286 | 0.3636 | 0.2269 | 0.133* | |
| H15C | 0.6787 | 0.3796 | 0.1519 | 0.133* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| I | 0.0565 (2) | 0.04572 (12) | 0.04033 (15) | −0.00107 (11) | 0.00570 (13) | −0.00037 (10) |
| S | 0.0481 (7) | 0.0287 (3) | 0.0571 (6) | −0.0014 (4) | 0.0050 (5) | 0.0060 (3) |
| O1 | 0.056 (2) | 0.0353 (10) | 0.0405 (15) | −0.0035 (10) | 0.0028 (14) | 0.0011 (9) |
| O2 | 0.0467 (19) | 0.0623 (14) | 0.0407 (16) | 0.0041 (13) | 0.0029 (14) | 0.0026 (12) |
| O3 | 0.050 (2) | 0.133 (2) | 0.054 (2) | 0.0157 (18) | 0.0137 (18) | 0.0208 (17) |
| O4 | 0.073 (2) | 0.0443 (11) | 0.0475 (17) | −0.0087 (12) | 0.0045 (16) | −0.0040 (11) |
| C1 | 0.042 (2) | 0.0309 (13) | 0.048 (2) | −0.0029 (14) | 0.0013 (18) | 0.0044 (13) |
| C2 | 0.036 (2) | 0.0290 (13) | 0.049 (2) | −0.0007 (13) | 0.0047 (19) | 0.0011 (13) |
| C3 | 0.041 (2) | 0.0303 (13) | 0.044 (2) | −0.0048 (13) | 0.0030 (19) | −0.0053 (13) |
| C4 | 0.038 (2) | 0.0395 (15) | 0.040 (2) | −0.0008 (14) | 0.0057 (18) | 0.0016 (13) |
| C5 | 0.049 (3) | 0.0282 (13) | 0.051 (2) | −0.0017 (14) | 0.007 (2) | 0.0047 (14) |
| C6 | 0.049 (3) | 0.0318 (14) | 0.042 (2) | −0.0027 (14) | 0.0035 (19) | −0.0004 (13) |
| C7 | 0.040 (2) | 0.0319 (14) | 0.041 (2) | −0.0033 (13) | 0.0007 (18) | −0.0019 (13) |
| C8 | 0.038 (2) | 0.0351 (14) | 0.048 (2) | −0.0014 (14) | 0.0022 (19) | 0.0053 (14) |
| C9 | 0.046 (3) | 0.0473 (16) | 0.047 (2) | −0.0063 (17) | 0.004 (2) | 0.0062 (15) |
| C10 | 0.047 (3) | 0.0417 (15) | 0.047 (2) | 0.0019 (16) | 0.008 (2) | 0.0035 (15) |
| C11 | 0.047 (3) | 0.078 (2) | 0.045 (3) | 0.019 (2) | −0.002 (2) | 0.0008 (19) |
| C12 | 0.084 (4) | 0.068 (2) | 0.051 (3) | 0.014 (2) | −0.002 (3) | 0.0033 (19) |
| C13 | 0.077 (4) | 0.117 (4) | 0.076 (4) | −0.037 (3) | −0.004 (3) | 0.007 (3) |
| C14 | 0.086 (4) | 0.0306 (14) | 0.064 (3) | −0.0021 (17) | −0.002 (2) | −0.0057 (15) |
| C15 | 0.073 (4) | 0.052 (2) | 0.151 (6) | 0.006 (2) | 0.049 (4) | −0.001 (2) |
Geometric parameters (Å, °)
| I—C4 | 2.095 (4) | C6—C14 | 1.514 (4) |
| I—O4i | 2.994 (3) | C8—C9 | 1.483 (5) |
| S—O4 | 1.486 (3) | C9—C10 | 1.496 (5) |
| S—O4ii | 3.128 (3) | C9—H9A | 0.9700 |
| S—C1 | 1.773 (3) | C9—H9B | 0.9700 |
| S—C15 | 1.789 (4) | C11—C13 | 1.500 (6) |
| O1—C7 | 1.378 (4) | C11—C12 | 1.511 (5) |
| O1—C8 | 1.381 (3) | C11—H11 | 0.9800 |
| O2—C10 | 1.346 (4) | C12—H12A | 0.9600 |
| O2—C11 | 1.445 (6) | C12—H12B | 0.9600 |
| O3—C10 | 1.201 (4) | C12—H12C | 0.9600 |
| C1—C8 | 1.344 (5) | C13—H13A | 0.9600 |
| C1—C2 | 1.447 (5) | C13—H13B | 0.9600 |
| C2—C3 | 1.386 (5) | C13—H13C | 0.9600 |
| C2—C7 | 1.395 (4) | C14—H14A | 0.9600 |
| C3—C4 | 1.392 (4) | C14—H14B | 0.9600 |
| C3—H3 | 0.9300 | C14—H14C | 0.9600 |
| C4—C5 | 1.414 (4) | C15—H15A | 0.9600 |
| C5—C6 | 1.367 (5) | C15—H15B | 0.9600 |
| C5—H5 | 0.9300 | C15—H15C | 0.9600 |
| C6—C7 | 1.390 (4) | ||
| I···O4i | 2.994 (3) | S···O4ii | 3.128 (3) |
| O4—S—C1 | 107.19 (17) | H9A—C9—H9B | 107.6 |
| C4—I—O4i | 168.51 (9) | O3—C10—O2 | 123.5 (4) |
| O4—S—C15 | 106.4 (2) | O3—C10—C9 | 126.3 (4) |
| C1—S—C15 | 97.22 (16) | O2—C10—C9 | 110.3 (3) |
| C7—O1—C8 | 106.2 (2) | O2—C11—C13 | 109.3 (3) |
| C10—O2—C11 | 118.8 (3) | O2—C11—C12 | 105.8 (4) |
| C8—C1—C2 | 108.2 (3) | C13—C11—C12 | 112.6 (4) |
| C8—C1—S | 124.1 (3) | O2—C11—H11 | 109.7 |
| C2—C1—S | 127.7 (3) | C13—C11—H11 | 109.7 |
| C3—C2—C7 | 119.6 (3) | C12—C11—H11 | 109.7 |
| C3—C2—C1 | 136.4 (3) | C11—C12—H12A | 109.5 |
| C7—C2—C1 | 104.0 (3) | C11—C12—H12B | 109.5 |
| C2—C3—C4 | 117.6 (3) | H12A—C12—H12B | 109.5 |
| C2—C3—H3 | 121.2 | C11—C12—H12C | 109.5 |
| C4—C3—H3 | 121.2 | H12A—C12—H12C | 109.5 |
| C3—C4—C5 | 120.8 (4) | H12B—C12—H12C | 109.5 |
| C3—C4—I | 118.4 (2) | C11—C13—H13A | 109.5 |
| C5—C4—I | 120.7 (2) | C11—C13—H13B | 109.5 |
| C6—C5—C4 | 122.5 (3) | H13A—C13—H13B | 109.5 |
| C6—C5—H5 | 118.7 | C11—C13—H13C | 109.5 |
| C4—C5—H5 | 118.7 | H13A—C13—H13C | 109.5 |
| C5—C6—C7 | 115.2 (3) | H13B—C13—H13C | 109.5 |
| C5—C6—C14 | 123.5 (3) | C6—C14—H14A | 109.5 |
| C7—C6—C14 | 121.3 (3) | C6—C14—H14B | 109.5 |
| O1—C7—C6 | 124.8 (3) | H14A—C14—H14B | 109.5 |
| O1—C7—C2 | 110.9 (2) | C6—C14—H14C | 109.5 |
| C6—C7—C2 | 124.2 (4) | H14A—C14—H14C | 109.5 |
| C1—C8—O1 | 110.6 (3) | H14B—C14—H14C | 109.5 |
| C1—C8—C9 | 133.6 (3) | S—C15—H15A | 109.5 |
| O1—C8—C9 | 115.8 (3) | S—C15—H15B | 109.5 |
| C8—C9—C10 | 114.2 (3) | H15A—C15—H15B | 109.5 |
| C8—C9—H9A | 108.7 | S—C15—H15C | 109.5 |
| C10—C9—H9A | 108.7 | H15A—C15—H15C | 109.5 |
| C8—C9—H9B | 108.7 | H15B—C15—H15C | 109.5 |
| C10—C9—H9B | 108.7 | ||
| O4—S—C1—C8 | 137.8 (3) | C5—C6—C7—C2 | 2.3 (6) |
| C15—S—C1—C8 | −112.5 (4) | C14—C6—C7—C2 | −176.2 (4) |
| O4—S—C1—C2 | −40.3 (4) | C3—C2—C7—O1 | 176.9 (3) |
| C15—S—C1—C2 | 69.4 (4) | C1—C2—C7—O1 | −0.6 (4) |
| C8—C1—C2—C3 | −175.0 (4) | C3—C2—C7—C6 | −1.9 (6) |
| S—C1—C2—C3 | 3.4 (7) | C1—C2—C7—C6 | −179.4 (4) |
| C8—C1—C2—C7 | 1.9 (4) | C2—C1—C8—O1 | −2.5 (4) |
| S—C1—C2—C7 | −179.8 (3) | S—C1—C8—O1 | 179.1 (3) |
| C7—C2—C3—C4 | −0.8 (5) | C2—C1—C8—C9 | 175.8 (4) |
| C1—C2—C3—C4 | 175.7 (4) | S—C1—C8—C9 | −2.6 (6) |
| C2—C3—C4—C5 | 3.0 (5) | C7—O1—C8—C1 | 2.1 (4) |
| C2—C3—C4—I | −176.1 (2) | C7—O1—C8—C9 | −176.6 (3) |
| C3—C4—C5—C6 | −2.7 (6) | C1—C8—C9—C10 | 93.3 (5) |
| I—C4—C5—C6 | 176.4 (3) | O1—C8—C9—C10 | −88.4 (4) |
| C4—C5—C6—C7 | 0.1 (5) | C11—O2—C10—O3 | −0.9 (5) |
| C4—C5—C6—C14 | 178.5 (4) | C11—O2—C10—C9 | 178.4 (3) |
| C8—O1—C7—C6 | 178.0 (4) | C8—C9—C10—O3 | −7.7 (5) |
| C8—O1—C7—C2 | −0.8 (4) | C8—C9—C10—O2 | 172.9 (2) |
| C5—C6—C7—O1 | −176.4 (3) | C10—O2—C11—C13 | 86.0 (4) |
| C14—C6—C7—O1 | 5.1 (6) | C10—O2—C11—C12 | −152.5 (3) |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1, y, −z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV2478).
References
- Allen, F. H., Baalham, C. A., Lommerse, J. P. M. & Raithby, P. R. (1998). Acta Cryst. B54, 320–329.
- Brandenburg, K. (1998). DIAMOND Crystal Impact GbR, Bonn, Germany.
- Bruker (2001). SAINT and SMART Bruker AXS Inc., Madison, Wisconsin, USA.
- Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2008a). Acta Cryst. E64, o2079. [DOI] [PMC free article] [PubMed]
- Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2008b). Acta Cryst. E64, o2250. [DOI] [PMC free article] [PubMed]
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808038671/cv2478sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808038671/cv2478Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


