Abstract
In the title compound, C15H13N3O3·H2O, the two benzene rings form a dihedral angle of 2.03 (2)°. In the crystal structure, adjacent hydrazide molecules are linked into dimers by water molecules; these dimers are then stacked along the b axis. Intermolecular O—H⋯O, O—H⋯N and C—H⋯O hydrogen bonds and a π–π stacking interaction between the nitrobenzene and tolyl rings with a centroid–centroid distance of 3.8208 (3) Å are observed. There is also a short O⋯N contact [2.6824 (7) Å].
Related literature
For related literature on hydrazones, see: Sridhar & Perumal (2003 ▶). For the biological applications of hydrazides/hydrazones, see: Bedia et al. (2006 ▶). For a related structure, see: Fun et al. (2008 ▶). For bond-length data, see: Allen et al. (1987 ▶).
Experimental
Crystal data
C15H13N3O3·H2O
M r = 301.30
Triclinic,
a = 6.5387 (1) Å
b = 6.9730 (1) Å
c = 15.9064 (3) Å
α = 80.524 (1)°
β = 82.628 (1)°
γ = 85.036 (1)°
V = 707.85 (2) Å3
Z = 2
Mo Kα radiation
μ = 0.10 mm−1
T = 100.0 (1) K
0.68 × 0.44 × 0.23 mm
Data collection
Bruker SMART APEXII CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.932, T max = 0.976
31311 measured reflections
7380 independent reflections
6571 reflections with I > 2σ(I)
R int = 0.020
Refinement
R[F 2 > 2σ(F 2)] = 0.037
wR(F 2) = 0.118
S = 1.05
7380 reflections
211 parameters
4 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.48 e Å−3
Δρmin = −0.59 e Å−3
Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶).
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808037008/is2358sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808037008/is2358Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N2—H1N2⋯O1W | 0.864 (8) | 1.978 (9) | 2.8191 (7) | 164.4 (11) |
| O1W—H2W1⋯O1i | 0.837 (9) | 2.013 (9) | 2.8327 (7) | 166.1 (11) |
| O1W—H1W1⋯O1ii | 0.851 (9) | 2.258 (11) | 2.9430 (6) | 137.7 (10) |
| O1W—H1W1⋯N1ii | 0.851 (9) | 2.357 (9) | 3.1287 (7) | 151.0 (11) |
| C1—H1A⋯O1Wiii | 0.93 | 2.50 | 3.4090 (7) | 165 |
| C4—H4A⋯O2iv | 0.93 | 2.58 | 3.4565 (8) | 157 |
| C7—H7A⋯O1W | 0.93 | 2.55 | 3.2393 (7) | 132 |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
.
Acknowledgments
FHK and SRJ thank the Malaysian Government and Universiti Sains Malaysia for the Science Fund grant No. 305/PFIZIK/613312. SRJ thanks Universiti Sains Malaysia for a post–doctoral research fellowship.
supplementary crystallographic information
Comment
Hydrazones are versatile intermediates and important building blocks. Aryl hydrazones are important building blocks for the synthesis of a variety of heterocyclic compounds such as pyrazolines and pyrazoles (Sridhar & Perumal, 2003). Hydrazones of aliphatic and aromatic methyl ketones yield pyrazole-4-carboxaldehyde on diformylation by the treatment with Vilsmeier reagent. A series of hydrazide-hydrazones were reported to possess good antituberculosis activity (Bedia et al., 2006). Prompted by these review and in continuation of our work (Fun et al., 2008), we here in report the crystal structure of the title compound, (I).
Bond lengths and angles in (I) (Fig. 1) are found to have normal values (Allen et al., 1987). The two benzene rings are essentially planar with the maximum deviation from planarity being -0.004 (1) Å for atom C6 and 0.002 (1) Å for atom C12, respectively. The dihedral angle formed by the benzene (C1—C6) and (C9—C14) rings is 2.03 (2)°.
The crystal packing is consolidated by O—H···O, O—H···N, C—H···O and N—H···O inter and intramolecular hydrogen bonding (Table 1). Furthermore, the packing is strengthened by π-π stacking interactions involving the benzene (C1—C6) (Cg1) and the symmetry related (C9—C14) ring (Cg2) [Cg1···Cg2i = 3.8208 (3) Å; symmetry code: (i) 2-x, 1-y, -z] together with O···N short contacts [2.6824 (7) Å]. In the crystal packing, adjacent molecules are linked into dimers by water molecules and the dimers were then stacked down the [010] direction (Fig. 2).
Experimental
The title compound, C15H15N3O4, was obtained by refluxing 4-nitrobenzhydrazide (0.01 mol) and 4-methylbenzaldehyde (0.01 mol) in ethanol (30 ml) by adding 3 drops of concentrated sulfuric acid for 3 h. Excess ethanol was removed from the reaction mixture under reduced pressure. The solid product obtained was filtered, washed with water and dried. Crystals suitable for X-ray analysis were obtained from ethanol by slow evaporation.
Refinement
The amino and water H atoms were located in a difference map and refined with restraints of N—H = 0.85 (1) Å and O—H = 0.84 (1) Å. The remaining H atoms were positioned geometrically [C—H = 0.93 Å (aromatic) or 0.96 Å (methyl)] and refined using a riding model, with Uiso(H) = 1.2Ueq(aromatic C) and 1.5Ueq(methyl C). A rotating group model was used for the methyl group.
Figures
Fig. 1.
The molecular structure of the title compound, showing 50% probability displacement ellipsoids and the atom numbering scheme.
Fig. 2.
The crystal packing of the title compound, viewed down the a axis, showing stacking of the dimers along the b axis.
Crystal data
| C15H13N3O3·H2O | Z = 2 |
| Mr = 301.30 | F000 = 316 |
| Triclinic, P1 | Dx = 1.414 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation λ = 0.71073 Å |
| a = 6.5387 (1) Å | Cell parameters from 9969 reflections |
| b = 6.9730 (1) Å | θ = 2.6–26.3º |
| c = 15.9064 (3) Å | µ = 0.11 mm−1 |
| α = 80.524 (1)º | T = 100.0 (1) K |
| β = 82.628 (1)º | Block, colourless |
| γ = 85.036 (1)º | 0.68 × 0.44 × 0.23 mm |
| V = 707.85 (2) Å3 |
Data collection
| Bruker SMART APEXII CCD area-detector diffractometer | 7380 independent reflections |
| Radiation source: fine-focus sealed tube | 6571 reflections with I > 2σ(I) |
| Monochromator: graphite | Rint = 0.020 |
| T = 100.0(1) K | θmax = 37.5º |
| φ and ω scans | θmin = 2.6º |
| Absorption correction: multi-scan(SADABS; Bruker, 2005) | h = −11→11 |
| Tmin = 0.932, Tmax = 0.976 | k = −11→10 |
| 31311 measured reflections | l = −27→27 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.037 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.119 | w = 1/[σ2(Fo2) + (0.0681P)2 + 0.1283P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.05 | (Δ/σ)max = 0.001 |
| 7380 reflections | Δρmax = 0.48 e Å−3 |
| 211 parameters | Δρmin = −0.59 e Å−3 |
| 4 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
Special details
| Experimental. The data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 1.27580 (6) | 0.77076 (7) | −0.04714 (3) | 0.01642 (8) | |
| O2 | 0.75581 (8) | 1.18850 (8) | −0.38841 (3) | 0.02159 (10) | |
| O3 | 0.46360 (8) | 1.16591 (9) | −0.30724 (3) | 0.02477 (11) | |
| N1 | 1.08155 (7) | 0.62939 (7) | 0.10666 (3) | 0.01228 (8) | |
| N2 | 0.97488 (7) | 0.71707 (7) | 0.03900 (3) | 0.01180 (8) | |
| N3 | 0.65301 (8) | 1.14188 (7) | −0.31919 (3) | 0.01517 (9) | |
| C1 | 1.25937 (9) | 0.43357 (8) | 0.25978 (3) | 0.01394 (9) | |
| H1A | 1.3528 | 0.4556 | 0.2105 | 0.017* | |
| C2 | 1.32689 (9) | 0.33958 (9) | 0.33630 (4) | 0.01558 (9) | |
| H2A | 1.4660 | 0.2992 | 0.3375 | 0.019* | |
| C3 | 1.19044 (10) | 0.30421 (9) | 0.41173 (4) | 0.01618 (10) | |
| C4 | 0.98236 (10) | 0.36711 (9) | 0.40850 (4) | 0.01732 (10) | |
| H4A | 0.8891 | 0.3455 | 0.4579 | 0.021* | |
| C5 | 0.91322 (9) | 0.46166 (9) | 0.33225 (4) | 0.01511 (9) | |
| H5A | 0.7744 | 0.5032 | 0.3313 | 0.018* | |
| C6 | 1.05015 (8) | 0.49509 (8) | 0.25695 (3) | 0.01205 (8) | |
| C7 | 0.96681 (8) | 0.59124 (8) | 0.17866 (3) | 0.01265 (9) | |
| H7A | 0.8259 | 0.6261 | 0.1809 | 0.015* | |
| C8 | 1.08418 (8) | 0.78209 (7) | −0.03665 (3) | 0.01124 (8) | |
| C9 | 0.96283 (8) | 0.87393 (7) | −0.10826 (3) | 0.01078 (8) | |
| C10 | 0.74981 (8) | 0.92155 (8) | −0.09685 (3) | 0.01259 (9) | |
| H10A | 0.6760 | 0.8932 | −0.0428 | 0.015* | |
| C11 | 0.64812 (8) | 1.01101 (8) | −0.16601 (3) | 0.01320 (9) | |
| H11A | 0.5067 | 1.0435 | −0.1589 | 0.016* | |
| C12 | 0.76204 (8) | 1.05088 (8) | −0.24589 (3) | 0.01220 (8) | |
| C13 | 0.97361 (9) | 1.00639 (8) | −0.25947 (3) | 0.01340 (9) | |
| H13A | 1.0465 | 1.0355 | −0.3137 | 0.016* | |
| C14 | 1.07314 (8) | 0.91711 (8) | −0.18969 (3) | 0.01269 (9) | |
| H14A | 1.2148 | 0.8857 | −0.1972 | 0.015* | |
| C15 | 1.26554 (12) | 0.20102 (11) | 0.49388 (4) | 0.02473 (13) | |
| H15A | 1.1517 | 0.1899 | 0.5386 | 0.037* | |
| H15B | 1.3687 | 0.2740 | 0.5096 | 0.037* | |
| H15C | 1.3242 | 0.0733 | 0.4859 | 0.037* | |
| O1W | 0.56488 (7) | 0.60570 (7) | 0.07749 (3) | 0.01669 (8) | |
| H1N2 | 0.8430 (12) | 0.7058 (17) | 0.0471 (8) | 0.027 (3)* | |
| H2W1 | 0.5907 (17) | 0.4907 (12) | 0.0684 (8) | 0.031 (3)* | |
| H1W1 | 0.4410 (13) | 0.6364 (17) | 0.0668 (8) | 0.035 (3)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.00972 (15) | 0.0221 (2) | 0.01583 (17) | 0.00035 (13) | −0.00227 (13) | 0.00155 (14) |
| O2 | 0.0250 (2) | 0.0269 (2) | 0.01076 (17) | −0.00148 (17) | −0.00275 (15) | 0.00358 (15) |
| O3 | 0.01615 (19) | 0.0361 (3) | 0.0199 (2) | 0.00133 (18) | −0.00737 (16) | 0.00461 (19) |
| N1 | 0.01330 (18) | 0.01250 (17) | 0.01075 (17) | −0.00018 (13) | −0.00421 (13) | 0.00081 (13) |
| N2 | 0.01085 (17) | 0.01426 (18) | 0.00977 (16) | −0.00046 (13) | −0.00339 (13) | 0.00113 (13) |
| N3 | 0.0174 (2) | 0.01585 (19) | 0.01215 (18) | −0.00094 (15) | −0.00535 (15) | 0.00083 (14) |
| C1 | 0.0137 (2) | 0.0152 (2) | 0.01227 (19) | −0.00081 (16) | −0.00285 (15) | 0.00066 (15) |
| C2 | 0.0155 (2) | 0.0166 (2) | 0.0143 (2) | 0.00085 (17) | −0.00481 (16) | −0.00018 (16) |
| C3 | 0.0208 (2) | 0.0158 (2) | 0.01158 (19) | 0.00194 (17) | −0.00496 (17) | −0.00040 (16) |
| C4 | 0.0199 (2) | 0.0196 (2) | 0.01066 (19) | 0.00142 (18) | −0.00093 (17) | 0.00081 (16) |
| C5 | 0.0148 (2) | 0.0174 (2) | 0.01210 (19) | 0.00041 (16) | −0.00163 (16) | −0.00002 (16) |
| C6 | 0.01369 (19) | 0.01192 (19) | 0.01037 (18) | −0.00115 (15) | −0.00323 (14) | 0.00030 (14) |
| C7 | 0.01325 (19) | 0.0133 (2) | 0.01122 (18) | −0.00088 (15) | −0.00333 (15) | 0.00004 (15) |
| C8 | 0.01101 (18) | 0.01159 (18) | 0.01084 (18) | 0.00006 (14) | −0.00243 (14) | −0.00044 (14) |
| C9 | 0.01090 (18) | 0.01125 (18) | 0.00998 (17) | −0.00020 (14) | −0.00238 (14) | −0.00045 (14) |
| C10 | 0.01106 (18) | 0.0154 (2) | 0.01048 (18) | 0.00026 (15) | −0.00182 (14) | 0.00036 (15) |
| C11 | 0.01170 (19) | 0.0154 (2) | 0.01187 (19) | 0.00029 (15) | −0.00297 (15) | 0.00029 (15) |
| C12 | 0.01382 (19) | 0.01256 (19) | 0.01019 (18) | −0.00090 (15) | −0.00400 (15) | 0.00040 (14) |
| C13 | 0.0141 (2) | 0.0151 (2) | 0.01041 (18) | −0.00143 (16) | −0.00148 (15) | −0.00005 (15) |
| C14 | 0.01159 (19) | 0.0146 (2) | 0.01130 (18) | −0.00053 (15) | −0.00128 (14) | −0.00060 (15) |
| C15 | 0.0321 (3) | 0.0271 (3) | 0.0134 (2) | 0.0068 (2) | −0.0081 (2) | 0.0011 (2) |
| O1W | 0.01130 (16) | 0.0212 (2) | 0.01725 (18) | −0.00029 (13) | −0.00349 (13) | −0.00109 (14) |
Geometric parameters (Å, °)
| O1—C8 | 1.2400 (6) | C6—C7 | 1.4605 (7) |
| O2—N3 | 1.2246 (7) | C7—H7A | 0.9300 |
| O3—N3 | 1.2298 (7) | C8—C9 | 1.4970 (7) |
| N1—C7 | 1.2881 (7) | C9—C14 | 1.3994 (7) |
| N1—N2 | 1.3859 (6) | C9—C10 | 1.3994 (7) |
| N2—C8 | 1.3491 (7) | C10—C11 | 1.3898 (7) |
| N2—H1N2 | 0.864 (8) | C10—H10A | 0.9300 |
| N3—C12 | 1.4703 (7) | C11—C12 | 1.3867 (7) |
| C1—C2 | 1.3896 (8) | C11—H11A | 0.9300 |
| C1—C6 | 1.4019 (8) | C12—C13 | 1.3884 (8) |
| C1—H1A | 0.9300 | C13—C14 | 1.3895 (7) |
| C2—C3 | 1.4008 (8) | C13—H13A | 0.9300 |
| C2—H2A | 0.9300 | C14—H14A | 0.9300 |
| C3—C4 | 1.3977 (9) | C15—H15A | 0.9600 |
| C3—C15 | 1.5035 (8) | C15—H15B | 0.9600 |
| C4—C5 | 1.3913 (8) | C15—H15C | 0.9600 |
| C4—H4A | 0.9300 | O1W—H2W1 | 0.837 (8) |
| C5—C6 | 1.3999 (8) | O1W—H1W1 | 0.851 (8) |
| C5—H5A | 0.9300 | ||
| C7—N1—N2 | 114.21 (4) | O1—C8—N2 | 122.52 (5) |
| C8—N2—N1 | 118.48 (4) | O1—C8—C9 | 120.74 (5) |
| C8—N2—H1N2 | 125.4 (8) | N2—C8—C9 | 116.74 (4) |
| N1—N2—H1N2 | 115.2 (8) | C14—C9—C10 | 119.65 (5) |
| O2—N3—O3 | 123.96 (5) | C14—C9—C8 | 116.93 (4) |
| O2—N3—C12 | 118.18 (5) | C10—C9—C8 | 123.40 (5) |
| O3—N3—C12 | 117.85 (5) | C11—C10—C9 | 120.23 (5) |
| C2—C1—C6 | 119.91 (5) | C11—C10—H10A | 119.9 |
| C2—C1—H1A | 120.0 | C9—C10—H10A | 119.9 |
| C6—C1—H1A | 120.0 | C12—C11—C10 | 118.60 (5) |
| C1—C2—C3 | 121.56 (5) | C12—C11—H11A | 120.7 |
| C1—C2—H2A | 119.2 | C10—C11—H11A | 120.7 |
| C3—C2—H2A | 119.2 | C11—C12—C13 | 122.73 (5) |
| C4—C3—C2 | 118.18 (5) | C11—C12—N3 | 118.38 (5) |
| C4—C3—C15 | 120.88 (6) | C13—C12—N3 | 118.89 (5) |
| C2—C3—C15 | 120.95 (6) | C12—C13—C14 | 118.01 (5) |
| C5—C4—C3 | 120.72 (5) | C12—C13—H13A | 121.0 |
| C5—C4—H4A | 119.6 | C14—C13—H13A | 121.0 |
| C3—C4—H4A | 119.6 | C13—C14—C9 | 120.79 (5) |
| C4—C5—C6 | 120.80 (5) | C13—C14—H14A | 119.6 |
| C4—C5—H5A | 119.6 | C9—C14—H14A | 119.6 |
| C6—C5—H5A | 119.6 | C3—C15—H15A | 109.5 |
| C5—C6—C1 | 118.83 (5) | C3—C15—H15B | 109.5 |
| C5—C6—C7 | 118.05 (5) | H15A—C15—H15B | 109.5 |
| C1—C6—C7 | 123.11 (5) | C3—C15—H15C | 109.5 |
| N1—C7—C6 | 122.33 (5) | H15A—C15—H15C | 109.5 |
| N1—C7—H7A | 118.8 | H15B—C15—H15C | 109.5 |
| C6—C7—H7A | 118.8 | H2W1—O1W—H1W1 | 106.0 (10) |
| C7—N1—N2—C8 | 172.77 (5) | N2—C8—C9—C14 | −171.45 (5) |
| C6—C1—C2—C3 | −0.09 (9) | O1—C8—C9—C10 | −168.59 (5) |
| C1—C2—C3—C4 | −0.32 (9) | N2—C8—C9—C10 | 10.18 (8) |
| C1—C2—C3—C15 | 179.55 (6) | C14—C9—C10—C11 | 0.09 (8) |
| C2—C3—C4—C5 | 0.20 (9) | C8—C9—C10—C11 | 178.42 (5) |
| C15—C3—C4—C5 | −179.67 (6) | C9—C10—C11—C12 | 0.20 (8) |
| C3—C4—C5—C6 | 0.33 (9) | C10—C11—C12—C13 | −0.47 (8) |
| C4—C5—C6—C1 | −0.73 (9) | C10—C11—C12—N3 | 178.76 (5) |
| C4—C5—C6—C7 | 178.66 (5) | O2—N3—C12—C11 | 175.31 (5) |
| C2—C1—C6—C5 | 0.61 (8) | O3—N3—C12—C11 | −4.94 (8) |
| C2—C1—C6—C7 | −178.75 (5) | O2—N3—C12—C13 | −5.43 (8) |
| N2—N1—C7—C6 | 178.63 (5) | O3—N3—C12—C13 | 174.32 (6) |
| C5—C6—C7—N1 | 179.37 (5) | C11—C12—C13—C14 | 0.42 (8) |
| C1—C6—C7—N1 | −1.26 (9) | N3—C12—C13—C14 | −178.81 (5) |
| N1—N2—C8—O1 | −1.88 (8) | C12—C13—C14—C9 | −0.10 (8) |
| N1—N2—C8—C9 | 179.38 (4) | C10—C9—C14—C13 | −0.14 (8) |
| O1—C8—C9—C14 | 9.78 (8) | C8—C9—C14—C13 | −178.58 (5) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H1N2···O1W | 0.864 (8) | 1.978 (9) | 2.8191 (7) | 164.4 (11) |
| O1W—H2W1···O1i | 0.837 (9) | 2.013 (9) | 2.8327 (7) | 166.1 (11) |
| O1W—H1W1···O1ii | 0.851 (9) | 2.258 (11) | 2.9430 (6) | 137.7 (10) |
| O1W—H1W1···N1ii | 0.851 (9) | 2.357 (9) | 3.1287 (7) | 151.0 (11) |
| C1—H1A···O1Wiii | 0.93 | 2.50 | 3.4090 (7) | 165 |
| C4—H4A···O2iv | 0.93 | 2.58 | 3.4565 (8) | 157 |
| C7—H7A···O1W | 0.93 | 2.55 | 3.2393 (7) | 132 |
Symmetry codes: (i) −x+2, −y+1, −z; (ii) x−1, y, z; (iii) x+1, y, z; (iv) x, y−1, z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS2358).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808037008/is2358sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808037008/is2358Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


