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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Nov 22;64(Pt 12):o2417. doi: 10.1107/S1600536808037653

(E)-2-(4-Fluoro­benzyl­idene)cyclo­octanone

Yu-Lin Zhu a,*, Min Xie a, Jie Zheng a, Changquan Deng a
PMCID: PMC2960143  PMID: 21581385

Abstract

The title compound, C15H17FO, was prepared directly from the aldol condensation of cyclo­octa­none with 4-fluoro­benz­aldehyde, catalysed by Pd(Ni,Ce) in the presence of trimethyl­silyl chloride. The eight-membered ring adopts a boat-chair conformation.

Related literature

For related structures, see: Huang, Zhu & Pan (2004); Huang, Zhu, Pan & Wan (2004); Zhu & Pan (2004). For general background, see: Amal Raj & Raghathan (2002); Deli et al. (1984).graphic file with name e-64-o2417-scheme1.jpg

Experimental

Crystal data

  • C15H17FO

  • M r = 232.29

  • Orthorhombic, Inline graphic

  • a = 12.0310 (2) Å

  • b = 8.6056 (1) Å

  • c = 12.2438 (2) Å

  • V = 1267.65 (3) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 273 (2) K

  • 0.20 × 0.15 × 0.10 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2004) T min = 0.983, T max = 0.998

  • 10067 measured reflections

  • 1584 independent reflections

  • 1584 reflections with I > 2σ(I)

  • R int = 0.036

Refinement

  • R[F 2 > 2σ(F 2)] = 0.037

  • wR(F 2) = 0.082

  • S = 1.07

  • 1584 reflections

  • 155 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 0.11 e Å−3

  • Δρmin = −0.11 e Å−3

Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808037653/rk2112sup1.cif

e-64-o2417-sup1.cif (17.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808037653/rk2112Isup2.hkl

e-64-o2417-Isup2.hkl (77.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

The authors thank SCNU for financial support.

supplementary crystallographic information

Comment

Arylmethyllidenecycloalkanones are a particularly important class of compounds which are used as precursors for the synthesis bioactive pyrimidine derivatives (Amal Raj & Raghathan, 2002; Deli et al.1984.) The aldol reaction, which is performed in the presence of strong acids, is one of the most useful reactions in organic chemistry. The reaction between cyclooctanone with 4-fluorobenzaldehyde afforded (E)-2-(4-fluorobenzylidene)cyclooctanone, I, (other than (2,8)-di-4-fluorobenzylidenecyclooctanone in excellent yield in the presence of Pd(Ni, Ce)-TMSCl system, where TMSCl is trimethylsilyl chloride, (Fig. 1) (Huang, Zhu & Pan, 2004; Huang, Zhu, Pan & Wan, 2004; Zhu & Pan, 2004). The molecule of I contains one eight-membered ring which adopts a boat-chair conformation and a phenyl ring. The boat-chair conformation is favourable for the cyclooctanone ring of I (Fig. 2). There are no unusual bond lengths and angles in the I. The C5/C7/C8/C15 torsion angle of -3.2 (3)°, to gather with C5/C7/C8/C9 torsion angle of 179.99 (17)°, describes the E-configuration of the molecule about the C7═C8 bond. The C7═C8 bond doesn't conjugate with C9═O1 bond due to the C7/C8/C9/O1 torsion angle has a value of -31.6 (3)° and the length of the double bonds is also normal. Similarly, the C4/C5/C7/C8 torsion angle has a value of -44.6 (3)° and the dihedral angel between the C7═C8–C5 plane with phenyl ring plane, so the C7═C8 bond do not conjugate with the phenyl ring. From the crystal packing of the title compound, the packing of molecule involves van der Waals interactions.

Experimental

A mixture of cyclooctanone (10 mmol), 4-fluorobenzaldehyde (10 mmol), palladium (0.10 mmol), and TMSCl (11 mmol) was refluxed in acetonitrile (12 ml) under 353 K for 5 h. After being cooled to room temperature, the reaction mixture was poured into water, the residue was filtration through a silica pad, and then washed twice with water, dried under vacuum to yield the products I. Single crystal of the I was obtained by slow evaporation from ethanol at room temperature.

Refinement

The H atoms were positioned geometrically and allowed to ride on their parent atoms, with C–H = 0.93 and 0.97 Å, and Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

Pd(Ni, Ce)-TMSCl catalyzed synthesis of the title compound.

Fig. 2.

Fig. 2.

A view of the molecule of (I), with the atomic numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are shown as a small spheres of arbitrary radius.

Crystal data

C15H17FO F000 = 496
Mr = 232.29 Dx = 1.217 Mg m3
Orthorhombic, Pna21 Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2c -2n Cell parameters from 2166 reflections
a = 12.0310 (2) Å θ = 2.9–22.2º
b = 8.60560 (10) Å µ = 0.08 mm1
c = 12.2438 (2) Å T = 273 (2) K
V = 1267.65 (3) Å3 Block, colourless
Z = 4 0.20 × 0.15 × 0.10 mm

Data collection

Bruker APEXII CCD diffractometer 1584 independent reflections
Radiation source: Fine-focus sealed tube 1584 reflections with I > 2σ(I)
Monochromator: Graphite Rint = 0.036
T = 273(2) K θmax = 27.9º
φ and ω scans θmin = 2.9º
Absorption correction: multi-scan(SADABS; Sheldrick, 2004) h = −15→12
Tmin = 0.983, Tmax = 0.998 k = −11→10
10067 measured reflections l = −16→13

Refinement

Refinement on F2 Hydrogen site location: Geom
Least-squares matrix: Full H-atom parameters constrained
R[F2 > 2σ(F2)] = 0.037   w = 1/[σ2(Fo2) + (0.0347P)2 + 0.02P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.082 (Δ/σ)max < 0.001
S = 1.07 Δρmax = 0.11 e Å3
1584 reflections Δρmin = −0.10 e Å3
155 parameters Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
1 restraint Extinction coefficient: 0.011 (2)
Primary atom site location: Direct Absolute structure: Since the molecule contains only light atoms, the intensities of 946 Friedels pairs were merged.
Secondary atom site location: Difmap

Special details

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.1978 (2) 1.3725 (3) 0.0997 (2) 0.0624 (7)
H1 0.1549 1.4428 0.1392 0.075*
C2 0.1992 (2) 1.3747 (3) −0.0114 (3) 0.0623 (7)
C3 0.2606 (2) 1.2750 (3) −0.0732 (2) 0.0592 (6)
H3 0.2605 1.2816 −0.1490 0.071*
C4 0.32327 (19) 1.1634 (2) −0.01984 (19) 0.0518 (6)
H4 0.3655 1.0940 −0.0607 0.062*
C5 0.32435 (18) 1.1529 (2) 0.09343 (18) 0.0471 (6)
C6 0.26236 (18) 1.2618 (2) 0.1518 (2) 0.0564 (6)
H6 0.2645 1.2601 0.2277 0.068*
C7 0.39214 (17) 1.0387 (2) 0.15185 (19) 0.0495 (5)
H7 0.4307 1.0764 0.2121 0.059*
C8 0.40628 (16) 0.8869 (2) 0.13044 (17) 0.0466 (5)
C9 0.4813 (2) 0.8002 (3) 0.20544 (19) 0.0529 (6)
C10 0.4617 (2) 0.6306 (3) 0.2298 (2) 0.0654 (7)
H10A 0.3849 0.6052 0.2133 0.078*
H10B 0.4735 0.6124 0.3071 0.078*
C11 0.5378 (2) 0.5233 (3) 0.1644 (2) 0.0694 (8)
H11A 0.6138 0.5581 0.1745 0.083*
H11B 0.5323 0.4197 0.1951 0.083*
C12 0.5154 (2) 0.5126 (3) 0.0430 (2) 0.0627 (6)
H12A 0.4396 0.4768 0.0327 0.075*
H12B 0.5643 0.4345 0.0122 0.075*
C13 0.53068 (18) 0.6639 (3) −0.0216 (2) 0.0565 (6)
H13A 0.5763 0.7339 0.0214 0.068*
H13B 0.5715 0.6403 −0.0879 0.068*
C14 0.42430 (19) 0.7491 (3) −0.05315 (19) 0.0586 (6)
H14A 0.3820 0.6829 −0.1020 0.070*
H14B 0.4446 0.8417 −0.0937 0.070*
C15 0.34864 (16) 0.7973 (2) 0.0413 (2) 0.0534 (5)
H15A 0.2886 0.8604 0.0125 0.064*
H15B 0.3159 0.7046 0.0728 0.064*
F1 0.13754 (15) 1.48509 (16) −0.06379 (17) 0.0991 (5)
O1 0.56001 (15) 0.86558 (19) 0.24861 (14) 0.0704 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0563 (14) 0.0496 (14) 0.081 (2) 0.0065 (11) 0.0107 (15) −0.0091 (14)
C2 0.0545 (14) 0.0467 (14) 0.086 (2) 0.0093 (12) −0.0095 (14) 0.0034 (13)
C3 0.0650 (16) 0.0544 (13) 0.0583 (15) 0.0011 (12) −0.0012 (12) 0.0033 (13)
C4 0.0543 (14) 0.0440 (12) 0.0572 (15) 0.0045 (10) 0.0064 (12) −0.0006 (11)
C5 0.0503 (14) 0.0413 (12) 0.0499 (14) 0.0000 (9) 0.0058 (12) −0.0013 (10)
C6 0.0613 (15) 0.0497 (12) 0.0583 (14) −0.0031 (11) 0.0086 (13) −0.0042 (13)
C7 0.0552 (13) 0.0497 (11) 0.0437 (12) −0.0012 (10) 0.0040 (11) 0.0004 (11)
C8 0.0446 (12) 0.0456 (11) 0.0494 (14) −0.0003 (9) 0.0051 (11) 0.0017 (10)
C9 0.0619 (15) 0.0542 (13) 0.0426 (13) 0.0023 (12) 0.0037 (12) 0.0032 (11)
C10 0.0829 (17) 0.0545 (14) 0.0587 (16) 0.0075 (13) 0.0069 (14) 0.0140 (12)
C11 0.0798 (19) 0.0520 (13) 0.077 (2) 0.0113 (12) −0.0010 (16) 0.0103 (13)
C12 0.0629 (14) 0.0498 (13) 0.0754 (17) 0.0080 (10) −0.0007 (14) −0.0058 (14)
C13 0.0572 (13) 0.0571 (13) 0.0551 (14) 0.0038 (10) 0.0045 (11) −0.0084 (11)
C14 0.0651 (15) 0.0564 (13) 0.0543 (14) −0.0007 (11) −0.0112 (13) −0.0075 (11)
C15 0.0454 (11) 0.0466 (11) 0.0682 (14) 0.0005 (9) −0.0094 (13) 0.0010 (12)
F1 0.1013 (12) 0.0788 (9) 0.1173 (13) 0.0376 (9) −0.0210 (11) 0.0041 (9)
O1 0.0841 (12) 0.0686 (10) 0.0583 (11) −0.0009 (9) −0.0200 (10) 0.0053 (8)

Geometric parameters (Å, °)

C1—C2 1.361 (4) C10—C11 1.527 (3)
C1—C6 1.385 (3) C10—H10A 0.9700
C1—H1 0.9300 C10—H10B 0.9700
C2—C3 1.361 (3) C11—C12 1.514 (4)
C2—F1 1.365 (3) C11—H11A 0.9700
C3—C4 1.384 (3) C11—H11B 0.9700
C3—H3 0.9300 C12—C13 1.535 (3)
C4—C5 1.390 (3) C12—H12A 0.9700
C4—H4 0.9300 C12—H12B 0.9700
C5—C6 1.395 (3) C13—C14 1.524 (3)
C5—C7 1.464 (3) C13—H13A 0.9700
C6—H6 0.9300 C13—H13B 0.9700
C7—C8 1.343 (3) C14—C15 1.529 (3)
C7—H7 0.9300 C14—H14A 0.9700
C8—C9 1.488 (3) C14—H14B 0.9700
C8—C15 1.506 (3) C15—H15A 0.9700
C9—O1 1.222 (3) C15—H15B 0.9700
C9—C10 1.508 (3)
C2—C1—C6 117.6 (2) H10A—C10—H10B 107.8
C2—C1—H1 121.2 C12—C11—C10 116.4 (2)
C6—C1—H1 121.2 C12—C11—H11A 108.2
C1—C2—C3 123.6 (2) C10—C11—H11A 108.2
C1—C2—F1 118.1 (3) C12—C11—H11B 108.2
C3—C2—F1 118.2 (3) C10—C11—H11B 108.2
C2—C3—C4 118.1 (2) H11A—C11—H11B 107.3
C2—C3—H3 121.0 C11—C12—C13 115.7 (2)
C4—C3—H3 121.0 C11—C12—H12A 108.4
C3—C4—C5 121.4 (2) C13—C12—H12A 108.4
C3—C4—H4 119.3 C11—C12—H12B 108.4
C5—C4—H4 119.3 C13—C12—H12B 108.4
C4—C5—C6 117.6 (2) H12A—C12—H12B 107.4
C4—C5—C7 122.4 (2) C14—C13—C12 115.95 (19)
C6—C5—C7 119.9 (2) C14—C13—H13A 108.3
C1—C6—C5 121.7 (3) C12—C13—H13A 108.3
C1—C6—H6 119.1 C14—C13—H13B 108.3
C5—C6—H6 119.1 C12—C13—H13B 108.3
C8—C7—C5 128.9 (2) H13A—C13—H13B 107.4
C8—C7—H7 115.5 C13—C14—C15 116.02 (19)
C5—C7—H7 115.5 C13—C14—H14A 108.3
C7—C8—C9 116.4 (2) C15—C14—H14A 108.3
C7—C8—C15 125.55 (19) C13—C14—H14B 108.3
C9—C8—C15 118.01 (17) C15—C14—H14B 108.3
O1—C9—C8 120.40 (19) H14A—C14—H14B 107.4
O1—C9—C10 118.8 (2) C8—C15—C14 114.40 (16)
C8—C9—C10 120.8 (2) C8—C15—H15A 108.7
C9—C10—C11 112.8 (2) C14—C15—H15A 108.7
C9—C10—H10A 109.0 C8—C15—H15B 108.7
C11—C10—H10A 109.0 C14—C15—H15B 108.7
C9—C10—H10B 109.0 H15A—C15—H15B 107.6
C11—C10—H10B 109.0
C6—C1—C2—C3 −0.2 (4) C7—C8—C9—O1 −31.5 (3)
C6—C1—C2—F1 −178.79 (18) C15—C8—C9—O1 151.4 (2)
C1—C2—C3—C4 1.3 (4) C7—C8—C9—C10 148.4 (2)
F1—C2—C3—C4 179.8 (2) C15—C8—C9—C10 −28.7 (3)
C2—C3—C4—C5 −0.2 (4) O1—C9—C10—C11 −79.6 (3)
C3—C4—C5—C6 −1.8 (4) C8—C9—C10—C11 100.6 (3)
C3—C4—C5—C7 −178.35 (18) C9—C10—C11—C12 −70.2 (3)
C2—C1—C6—C5 −1.9 (4) C10—C11—C12—C13 63.3 (3)
C4—C5—C6—C1 2.9 (3) C11—C12—C13—C14 −102.8 (3)
C7—C5—C6—C1 179.6 (2) C12—C13—C14—C15 58.4 (3)
C4—C5—C7—C8 −44.6 (4) C7—C8—C15—C14 109.4 (2)
C6—C5—C7—C8 138.9 (2) C9—C8—C15—C14 −73.8 (2)
C5—C7—C8—C9 180.0 (2) C13—C14—C15—C8 51.9 (3)
C5—C7—C8—C15 −3.2 (4)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: RK2112).

References

  1. Amal Raj, A. & Raghathan, R. (2002). Synth. Commun.32, 3295-3300.
  2. Bruker (2004). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Deli, J., Lorand, T., Szabo, D. & Foldesi, A. (1984). Pharmazie, 39, 539–540. [PubMed]
  4. Huang, S.-L., Zhu, Y.-L. & Pan, Y.-J. (2004). Acta Cryst. E60, o1000–o1002.
  5. Huang, S.-L., Zhu, Y.-L., Pan, Y.-J. & Wan, H.-T. (2004). Acta Cryst. E60, o1504–o1506.
  6. Sheldrick, G. M. (2004). SADABS University of Göttingen, Germany.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  8. Zhu, Y. & Pan, Y. (2004). Chem. Lett.33, 668–669.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808037653/rk2112sup1.cif

e-64-o2417-sup1.cif (17.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808037653/rk2112Isup2.hkl

e-64-o2417-Isup2.hkl (77.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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