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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Jan 16;64(Pt 2):o461. doi: 10.1107/S1600536808001037

Hydrazinediium bis­(6-carboxy­pyridazine-3-carboxyl­ate) dihydrate

Wojciech Starosta a, Janusz Leciejewicz a,*
PMCID: PMC2960334  PMID: 21201487

Abstract

The triclinic unit cell of the title compound, N2H6 2+·2C6H3N2O4 ·2H2O, contains one doubly protonated hydrazine cation which lies on an inversion centre, two symmetry-related singly deprotonated 6-carboxy­pyridazine-3-carboxyl­ate anions and two symmetry-related solvent water mol­ecules. The anions inter­act via hydrogen bonds to form double ribbons which are bridged by hydrogen bonds donated by hydrazinediium cations and water molecules.

Related literature

For the crystal structures of two polymorphs of the hydrazine adduct of pyrazole-3,5-dicarboxylic acid, see Kumar et al. (2007). Singly protonated hydrazine cations and di(aqua-O)bis­(pyridazine-3,6-dicarboxyl­ato-N,O)magnesium(II) anions have also been observed (Gryz et al., 2004). For related literature, see: Starosta & Leciejewicz (2004); Sueur et al. (1987).graphic file with name e-64-0o461-scheme1.jpg

Experimental

Crystal data

  • N2H6 2+·2C6H3N2O4 ·2H2O

  • M r = 404.31

  • Triclinic, Inline graphic

  • a = 5.1727 (10) Å

  • b = 6.6257 (13) Å

  • c = 12.271 (3) Å

  • α = 102.08 (3)°

  • β = 93.92 (3)°

  • γ = 107.44 (3)°

  • V = 388.47 (17) Å3

  • Z = 1

  • Mo Kα radiation

  • μ = 0.15 mm−1

  • T = 293 (2) K

  • 0.16 × 0.08 × 0.07 mm

Data collection

  • Kuma KM-4 four-circle diffractometer

  • Absorption correction: none

  • 2512 measured reflections

  • 2279 independent reflections

  • 1431 reflections with I > 2σ(I)

  • R int = 0.017

  • 3 standard reflections every 200 reflections intensity decay: 3.72%

Refinement

  • R[F 2 > 2σ(F 2)] = 0.040

  • wR(F 2) = 0.133

  • S = 1.02

  • 2279 reflections

  • 159 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.52 e Å−3

  • Δρmin = −0.23 e Å−3

Data collection: KM-4 Software (Kuma, 1996); cell refinement: KM-4 Software; data reduction: DATAPROC (Kuma, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808001037/at2534sup1.cif

e-64-0o461-sup1.cif (13.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808001037/at2534Isup2.hkl

e-64-0o461-Isup2.hkl (112KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O6—H62⋯N1i 0.81 (3) 2.23 (3) 3.031 (2) 174 (3)
N3—H51⋯O4ii 0.96 (2) 1.85 (2) 2.770 (2) 160 (2)
O6—H61⋯O4ii 0.98 (3) 1.99 (3) 2.9581 (18) 168 (2)
O6—H61⋯N1ii 0.98 (3) 2.45 (2) 3.039 (2) 118.5 (18)
N3—H53⋯N2i 0.91 (2) 1.95 (2) 2.8287 (18) 163 (2)
N3—H53⋯O2i 0.91 (2) 2.50 (2) 3.0627 (19) 120.7 (17)
N3—H52⋯O6iii 1.04 (2) 1.71 (2) 2.7473 (18) 176.6 (19)
O1—H1⋯O3iv 1.03 (4) 1.51 (4) 2.5152 (16) 165 (3)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

supplementary crystallographic information

Comment

The structure of the title compound (I) is composed of one doubly-protonated hydrazine cation having its geometrical centre on an inversion centre at 1/2,0,0, two symmetry related singly-deprotonated pyridazine-3,6-dicarboxylate anions and a pair of symmetry related solvent water molecules. Fig.1 shows the asymetric unit with atom labelling scheme. Atoms forming the pyridazine ring are coplanar (r.m.s.0.057 Å). The carboxylate moiety (C7/O1/O2) makes an angle of 3.8 (1) ° with the pyridazine ring, while the (C8/O3/O4) group makes an angle of 1.1 (1) °. Bond lengths and bond angles within the title anion agree well with those reported in the structures of both modifications of the parent acid (Sueur et al., 1987, Starosta & Leciejewicz, 2004). A fairly strong hydrogen bond of 2.515 (2) Å is observed between the protonated O atom of the carboxylic group acting as a donor and the deprotonated carboxylate O atom in the adjacent anion giving rise to polyionic ribbons composed of pairs of anions (Fig. 2). The ribbons are bridged by weaker bonds in which the hydrazine cations and solvation water molecules are the donors and the anions' O atoms and hetero-ring N atoms act as acceptors.

Experimental

In the course of experiments aiming to obtain single crystals of a calcium complex with pyridazine-3,6-dicarboxylate ligand, single crystals of either the triclinic modification of the pyridazine-3,6-dicarboxylic acid dihydrate (Starosta & Leciejewicz, 2004) or of the title compound were found in the mass of polycrystalline material. The crystals of the title compound appeared when hydrazine was used to maintain the acidicity of the initial solution.

Refinement

All H atoms were located in a difference map and refined with isotropic displacement parameters.

Figures

Fig. 1.

Fig. 1.

The asymmetric unit with atom labelling scheme and 50% probability displacement ellipsoids. The hydrazine cation is symmetry complete (symmetry code: (A) -x + 1, -y + 1, -z + 1).

Fig. 2.

Fig. 2.

Packing diagram of the structure of (I).

Crystal data

N2H62+·2C6H3N2O4·2H2O Z = 1
Mr = 404.31 F000 = 210
Triclinic, P1 Dx = 1.728 Mg m3
Hall symbol: -P 1 Mo Kα radiation λ = 0.71073 Å
a = 5.1727 (10) Å Cell parameters from 25 reflections
b = 6.6257 (13) Å θ = 6–15º
c = 12.271 (3) Å µ = 0.15 mm1
α = 102.08 (3)º T = 293 (2) K
β = 93.92 (3)º Rectangular plate, colourless
γ = 107.44 (3)º 0.16 × 0.08 × 0.07 mm
V = 388.47 (17) Å3

Data collection

Kuma KM-4 four-circle diffractometer Rint = 0.017
Radiation source: fine-focus sealed tube θmax = 30.1º
Monochromator: graphite θmin = 1.7º
T = 293(2) K h = −7→0
profile data from ω/2θ scans k = −8→9
Absorption correction: none l = −17→17
2512 measured reflections 3 standard reflections
2279 independent reflections every 200 reflections
1431 reflections with I > 2σ(I) intensity decay: 3.7%

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.133   w = 1/[σ2(Fo2) + (0.092P)2] where P = (Fo2 + 2Fc2)/3
S = 1.02 (Δ/σ)max < 0.001
2279 reflections Δρmax = 0.52 e Å3
159 parameters Δρmin = −0.23 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > σ(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O2 0.0745 (3) 1.1260 (2) 0.19096 (9) 0.0301 (3)
O3 0.6795 (3) 0.37197 (19) 0.35261 (9) 0.0292 (3)
O4 0.7130 (3) 0.4033 (2) 0.17502 (10) 0.0319 (3)
O1 −0.0377 (3) 1.1253 (2) 0.36330 (10) 0.0315 (3)
N2 0.3236 (3) 0.8346 (2) 0.19854 (10) 0.0248 (3)
N1 0.4514 (3) 0.6882 (2) 0.19574 (10) 0.0261 (3)
C6 0.4853 (3) 0.6120 (2) 0.28600 (11) 0.0198 (3)
C3 0.2223 (3) 0.9032 (2) 0.29085 (11) 0.0191 (3)
C7 0.0773 (3) 1.0655 (2) 0.27720 (12) 0.0212 (3)
C4 0.2473 (3) 0.8274 (2) 0.38706 (12) 0.0238 (3)
C8 0.6396 (3) 0.4472 (2) 0.26852 (12) 0.0215 (3)
C5 0.3863 (4) 0.6784 (3) 0.38484 (12) 0.0250 (3)
O6 0.1862 (3) 0.3212 (2) 0.98874 (10) 0.0295 (3)
N3 0.3528 (3) 0.9661 (2) 0.99354 (11) 0.0233 (3)
H5 0.169 (4) 0.871 (3) 0.4510 (18) 0.031 (5)*
H6 0.411 (4) 0.628 (3) 0.4471 (19) 0.037 (6)*
H62 0.268 (6) 0.416 (5) 1.044 (2) 0.059 (8)*
H51 0.288 (5) 0.840 (4) 0.9317 (19) 0.038 (6)*
H61 0.223 (5) 0.395 (4) 0.927 (2) 0.045 (6)*
H53 0.307 (5) 0.924 (3) 1.0576 (18) 0.035 (5)*
H52 0.288 (5) 1.098 (4) 0.9885 (18) 0.036 (5)*
H1 −0.136 (8) 1.234 (6) 0.350 (3) 0.117 (14)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O2 0.0426 (8) 0.0379 (6) 0.0231 (5) 0.0268 (6) 0.0091 (5) 0.0143 (4)
O3 0.0400 (7) 0.0348 (6) 0.0259 (5) 0.0261 (5) 0.0095 (5) 0.0130 (4)
O4 0.0465 (8) 0.0369 (6) 0.0248 (5) 0.0295 (6) 0.0119 (5) 0.0082 (4)
O1 0.0459 (8) 0.0394 (7) 0.0263 (5) 0.0315 (6) 0.0165 (5) 0.0148 (5)
N2 0.0362 (8) 0.0282 (6) 0.0197 (5) 0.0208 (6) 0.0089 (5) 0.0098 (5)
N1 0.0382 (8) 0.0294 (7) 0.0215 (6) 0.0231 (6) 0.0105 (5) 0.0092 (5)
C6 0.0237 (7) 0.0200 (6) 0.0200 (6) 0.0123 (5) 0.0051 (5) 0.0055 (5)
C3 0.0225 (7) 0.0199 (6) 0.0184 (6) 0.0109 (5) 0.0044 (5) 0.0056 (5)
C7 0.0238 (7) 0.0222 (7) 0.0210 (6) 0.0119 (6) 0.0037 (5) 0.0053 (5)
C4 0.0339 (8) 0.0279 (7) 0.0179 (6) 0.0194 (6) 0.0084 (6) 0.0077 (5)
C8 0.0249 (8) 0.0202 (6) 0.0231 (6) 0.0124 (6) 0.0036 (5) 0.0058 (5)
C5 0.0373 (9) 0.0284 (7) 0.0190 (6) 0.0206 (7) 0.0081 (6) 0.0102 (5)
O6 0.0375 (7) 0.0290 (6) 0.0237 (6) 0.0128 (5) 0.0049 (5) 0.0070 (4)
N3 0.0225 (7) 0.0293 (7) 0.0220 (6) 0.0121 (5) 0.0057 (5) 0.0084 (5)

Geometric parameters (Å, °)

O2—C7 1.2082 (18) C3—C7 1.5128 (18)
O3—C8 1.2666 (17) C4—C5 1.382 (2)
O4—C8 1.2376 (18) C4—H5 0.94 (2)
O1—C7 1.2956 (18) C5—H6 0.91 (2)
O1—H1 1.03 (4) O6—H62 0.81 (3)
N2—N1 1.3241 (17) O6—H61 0.98 (3)
N2—C3 1.3313 (18) N3—N3i 1.440 (3)
N1—C6 1.3317 (17) N3—H51 0.96 (2)
C6—C5 1.387 (2) N3—H53 0.91 (2)
C6—C8 1.5236 (18) N3—H52 1.04 (2)
C3—C4 1.3889 (19)
C7—O1—H1 111 (2) C3—C4—H5 122.1 (13)
N1—N2—C3 120.23 (12) O4—C8—O3 127.45 (13)
N2—N1—C6 120.34 (12) O4—C8—C6 116.92 (12)
N1—C6—C5 122.08 (13) O3—C8—C6 115.63 (12)
N1—C6—C8 113.36 (12) C4—C5—C6 117.66 (13)
C5—C6—C8 124.56 (12) C4—C5—H6 119.8 (14)
N2—C3—C4 122.16 (13) C6—C5—H6 122.5 (14)
N2—C3—C7 112.66 (12) H62—O6—H61 103 (2)
C4—C3—C7 125.17 (13) N3i—N3—H51 106.7 (14)
O2—C7—O1 126.02 (13) N3i—N3—H53 105.3 (14)
O2—C7—C3 119.91 (13) H51—N3—H53 108 (2)
O1—C7—C3 114.07 (12) N3i—N3—H52 109.5 (13)
C5—C4—C3 117.50 (13) H51—N3—H52 117.5 (18)
C5—C4—H5 120.3 (13) H53—N3—H52 109.0 (18)

Symmetry codes: (i) −x+1, −y+2, −z+2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O6—H62···N1ii 0.81 (3) 2.23 (3) 3.031 (2) 174 (3)
N3—H51···O4iii 0.96 (2) 1.85 (2) 2.770 (2) 160 (2)
O6—H61···O4iii 0.98 (3) 1.99 (3) 2.9581 (18) 168 (2)
O6—H61···N1iii 0.98 (3) 2.45 (2) 3.039 (2) 118.5 (18)
N3—H53···N2ii 0.91 (2) 1.95 (2) 2.8287 (18) 163 (2)
N3—H53···O2ii 0.91 (2) 2.50 (2) 3.0627 (19) 120.7 (17)
N3—H52···O6iv 1.04 (2) 1.71 (2) 2.7473 (18) 176.6 (19)
O1—H1···O3v 1.03 (4) 1.51 (4) 2.5152 (16) 165 (3)

Symmetry codes: (ii) x, y, z+1; (iii) −x+1, −y+1, −z+1; (iv) x, y+1, z; (v) x−1, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: AT2534).

References

  1. Gryz, M., Starosta, W. & Leciejewicz, J. (2004). J. Coord. Chem.57, 917–922.
  2. Kuma (1996). KM-4 Software Kuma Diffraction Ltd, Wrocław, Poland.
  3. Kuma (2001). DATAPROC Version 10.0.7. Kuma Diffraction Ltd, Wrocław, Poland.
  4. Kumar, V. S. S., Premkumar, T., Rath, N. P. & Govindarajan, S. (2007). Indian J. Chem. Sect B, 46, 141–147.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Starosta, W. & Leciejewicz, J. (2004). J. Coord. Chem.57, 1151–1156.
  7. Sueur, S., Lagrengee, M., Abraham, F. & Brenard, C. (1987). J. Heterocycl. Chem.24, 1285–1289.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808001037/at2534sup1.cif

e-64-0o461-sup1.cif (13.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808001037/at2534Isup2.hkl

e-64-0o461-Isup2.hkl (112KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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