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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Jan 9;64(Pt 2):o405. doi: 10.1107/S1600536807068572

trans-4-(Tosyl­oxymeth­yl)cyclo­hexane­carboxylic acid

Qing-Rong Qi a, Wen-Cai Huang b, Hu Zheng a,*
PMCID: PMC2960345  PMID: 21201433

Abstract

The title compound, C15H20O5S, is an inter­mediate in the synthesis of a new type of poly(amido­amine) (PAMAM) dendrimer. The cyclo­hexane ring exhibits a chair conformation, with C—C bond lengths in the range 1.518 (3)–1.531 (3) Å and C—C—C angles in the range 110.45 (19)–112.09 (19)°; these agree well with the values in other cyclo­hexane derivatives described in the literature. In the crystal structure, adjacent mol­ecules are linked by O—H⋯·O hydrogen bonds. The H atoms of the methyl group are disordered equally over two positions.

Related literature

For related literature, see: Ahmed et al. (2001); Bucourt & Hainaut (1965); Dunitz & Strickler (1966); Grabchev et al. (2003); Luger et al. (1972); Wang et al. (2004); van Koningsveld & Jansen (1984).graphic file with name e-64-0o405-scheme1.jpg

Experimental

Crystal data

  • C15H20O5S

  • M r = 312.37

  • Triclinic, Inline graphic

  • a = 5.9006 (5) Å

  • b = 7.0880 (9) Å

  • c = 20.2754 (18) Å

  • α = 90.371 (3)°

  • β = 97.479 (2)°

  • γ = 111.222 (2)°

  • V = 782.44 (14) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.23 mm−1

  • T = 293 (2) K

  • 0.53 × 0.48 × 0.12 mm

Data collection

  • Rigaku R-AXIS RAPID diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995) T min = 0.890, T max = 0.974

  • 7685 measured reflections

  • 3562 independent reflections

  • 2442 reflections with I > 2σ(I)

  • R int = 0.024

Refinement

  • R[F 2 > 2σ(F 2)] = 0.044

  • wR(F 2) = 0.179

  • S = 1.01

  • 3562 reflections

  • 195 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.30 e Å−3

  • Δρmin = −0.48 e Å−3

Data collection: RAPID-AUTO (Rigaku, 2004); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 1997); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807068572/wn2233sup1.cif

e-64-0o405-sup1.cif (19.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807068572/wn2233Isup2.hkl

e-64-0o405-Isup2.hkl (174.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O4—H4O⋯O5i 0.89 (4) 1.76 (4) 2.654 (3) 178 (3)

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank Mr Kai-Bei Yu of the Chengdu Branch of the Chinese Academy of Science for the X-ray measurements.

supplementary crystallographic information

Comment

PAMAM (poly(amidoamine)) dendrimers have attracted much interest for their symmetry, high degree of branching and high density of terminal functional groups, which can participate in different reactions. The modification of the periphery of PAMAM dendrimers, aimed to change their physical or chemical properties, have been reported recently (Grabchev et al.,2003; Ahmed et al.,2001; Wang et al.,2004). To improve the lipophilicity of PAMAM dendrimers and provide a new type of linker with special stereostructure, a series of cyclohexane derivatives were synthesized. In our synthetic work on PAMAM dendrimers, we obtained the title compound, and report here its crystal structure.

The crystal structure shows that molecules are linked by O—H···.O hydrogen bonds and the cyclohexane ring exists in the chair conformation. The mean C—C bond length of the cyclohexane ring is 1.524 (3) Å, which is close to the value in trans-1,4-cyclohexane dicarboxylic acid (1.523 (3) Å; Luger et al., 1972). The mean endocyclic angle is 111.3 (2)°, which is close to the value for an ideal cyclohexane ring, (C—C—C 111.1°; Bucourt & Hainaut, 1965) and the mean value in trans-1,4-cyclohexanedicarboxylic acid (111.4 (4)°; Dunitz & Strickler, 1966; Luger et al., 1972).

Experimental

trans-4-(Methoxycarbonyl)cyclohexanemethanol (10 mmol), triethylamine (10 mmol) and a small amount of trimethylamine hydrochloride were suspended in dichloromethane (20 ml), and p-toluenesulfonyl chloride (11 mmol) was added dropwise with vigorous stirring at room temperature; after 1 h the reaction was quenched by addition of water. The organic layer which separated was evaporated to give an oil and the oil was hydrolyzed in a methanol and aqueous NaOH (11 mmol) solution for 5 h at 323 K. The title compound was then obtained by acidification with hydrochloric acid and recrystallized from acetone. Colorless crystals suitable for X-ray analysis were obtained by slow evaporation of a cyclohexane and acetone solution at room temperature.

Refinement

The carboxyl H was located in a difference Fourier map and refined freely to an O—H value of 0.89 (4) Å. The other H atoms were placed in calculated positions and refined in the riding model approximation, with C—H = 0.93, 0.96, 0.97, or 0.98 Å for benzene, methyl, methylene or methine H atoms, respectively. For carbon-bound H atoms, Uiso(H) = 1.2Ueq(C). The H atoms of the methyl group are disordered equally over two positions.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, with displacement ellipsoids drawn at the 20% probability level.

Fig. 2.

Fig. 2.

A packing diagram of the title compound. Intermolecular hydrogen bonds are shown as dashed lines.

Crystal data

C15H20O5S Z = 2
Mr = 312.37 F000 = 332
Triclinic, P1 Dx = 1.326 Mg m3
a = 5.9006 (5) Å Mo Kα radiation λ = 0.71073 Å
b = 7.0880 (9) Å Cell parameters from 5250 reflections
c = 20.2754 (18) Å θ = 3.1–27.5º
α = 90.371 (3)º µ = 0.23 mm1
β = 97.479 (2)º T = 293 (2) K
γ = 111.222 (2)º Block, colourless
V = 782.44 (14) Å3 0.53 × 0.48 × 0.12 mm

Data collection

Rigaku R-AXIS RAPID diffractometer 3562 independent reflections
Radiation source: Rotating Anode 2442 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.024
T = 293(2) K θmax = 27.5º
ω scans θmin = 3.1º
Absorption correction: multi-scan(ABSCOR; Higashi, 1995) h = −6→7
Tmin = 0.890, Tmax = 0.974 k = −9→9
7685 measured reflections l = −26→26

Refinement

Refinement on F2 Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: full H atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.044   w = 1/[σ2(Fo2) + (0.1018P)2 + 0.285P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.179 (Δ/σ)max < 0.001
S = 1.01 Δρmax = 0.30 e Å3
3562 reflections Δρmin = −0.48 e Å3
195 parameters Extinction correction: SHELXL97 (Sheldrick, 1997a), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.047 (7)
Secondary atom site location: difference Fourier map

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
S1 0.95047 (11) 0.96589 (9) 0.20554 (3) 0.0486 (2)
O1 0.8978 (3) 0.9010 (3) 0.27746 (8) 0.0470 (4)
O2 0.8958 (4) 1.1432 (3) 0.19236 (10) 0.0610 (5)
O3 1.1925 (3) 0.9708 (3) 0.20334 (10) 0.0655 (5)
O4 −0.1018 (4) 0.1728 (3) 0.44904 (11) 0.0642 (6)
O5 0.2394 (4) 0.1042 (3) 0.46193 (10) 0.0624 (5)
C1 0.5304 (5) 0.5148 (3) 0.31242 (13) 0.0497 (6)
H1A 0.4091 0.4897 0.2729 0.060*
H1B 0.6801 0.5106 0.2988 0.060*
C2 0.4366 (5) 0.3497 (4) 0.36070 (13) 0.0518 (6)
H2A 0.3981 0.2181 0.3383 0.062*
H2B 0.5646 0.3666 0.3980 0.062*
C3 0.2093 (4) 0.3565 (3) 0.38646 (11) 0.0431 (5)
H3 0.0790 0.3290 0.3484 0.052*
C4 0.2559 (5) 0.5666 (3) 0.41785 (12) 0.0486 (6)
H4A 0.1041 0.5699 0.4303 0.058*
H4B 0.3742 0.5924 0.4580 0.058*
C5 0.3526 (5) 0.7314 (4) 0.36991 (13) 0.0514 (6)
H5A 0.3915 0.8629 0.3924 0.062*
H5B 0.2255 0.7154 0.3325 0.062*
C6 0.5811 (4) 0.7245 (3) 0.34417 (11) 0.0408 (5)
H6 0.7122 0.7516 0.3820 0.049*
C7 0.1191 (4) 0.1984 (3) 0.43585 (11) 0.0425 (5)
C8 0.6621 (4) 0.8906 (3) 0.29618 (12) 0.0436 (5)
H8A 0.5399 0.8620 0.2568 0.052*
H8B 0.6794 1.0195 0.3171 0.052*
C9 0.7391 (4) 0.7608 (4) 0.15427 (12) 0.0478 (6)
C10 0.7786 (5) 0.5806 (4) 0.15077 (14) 0.0583 (7)
H10 0.9218 0.5712 0.1731 0.070*
C11 0.6055 (6) 0.4147 (5) 0.11411 (15) 0.0655 (8)
H11 0.6334 0.2940 0.1116 0.079*
C12 0.3903 (6) 0.4259 (5) 0.08091 (14) 0.0629 (7)
C13 0.3540 (5) 0.6067 (5) 0.08475 (15) 0.0657 (8)
H13 0.2106 0.6158 0.0624 0.079*
C14 0.5257 (5) 0.7752 (4) 0.12102 (14) 0.0581 (7)
H14 0.4985 0.8963 0.1231 0.070*
C15 0.1990 (7) 0.2410 (6) 0.04226 (17) 0.0855 (11)
H15A 0.2558 0.1300 0.0451 0.103* 0.50
H15B 0.1716 0.2706 −0.0036 0.103* 0.50
H15C 0.0481 0.2051 0.0608 0.103* 0.50
H15D 0.0612 0.2738 0.0231 0.103* 0.50
H15E 0.1454 0.1332 0.0717 0.103* 0.50
H15F 0.2689 0.1987 0.0074 0.103* 0.50
H4O −0.145 (6) 0.081 (5) 0.4795 (18) 0.085 (11)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0436 (4) 0.0492 (4) 0.0561 (4) 0.0181 (3) 0.0138 (3) 0.0168 (3)
O1 0.0410 (8) 0.0506 (9) 0.0490 (9) 0.0158 (7) 0.0070 (7) 0.0125 (7)
O2 0.0630 (12) 0.0484 (10) 0.0761 (12) 0.0226 (9) 0.0186 (10) 0.0222 (9)
O3 0.0395 (9) 0.0834 (14) 0.0793 (13) 0.0239 (9) 0.0234 (9) 0.0198 (10)
O4 0.0575 (11) 0.0653 (12) 0.0795 (13) 0.0268 (10) 0.0295 (10) 0.0342 (10)
O5 0.0615 (11) 0.0614 (11) 0.0751 (12) 0.0295 (9) 0.0257 (10) 0.0298 (9)
C1 0.0605 (15) 0.0417 (12) 0.0521 (13) 0.0198 (11) 0.0224 (11) 0.0060 (10)
C2 0.0639 (15) 0.0373 (12) 0.0632 (15) 0.0235 (11) 0.0254 (12) 0.0101 (10)
C3 0.0470 (12) 0.0366 (11) 0.0454 (12) 0.0136 (9) 0.0107 (10) 0.0065 (9)
C4 0.0595 (14) 0.0382 (12) 0.0528 (13) 0.0191 (11) 0.0206 (11) 0.0057 (10)
C5 0.0641 (15) 0.0374 (12) 0.0616 (14) 0.0237 (11) 0.0246 (12) 0.0111 (10)
C6 0.0454 (12) 0.0363 (11) 0.0419 (11) 0.0149 (9) 0.0104 (9) 0.0093 (8)
C7 0.0440 (12) 0.0367 (11) 0.0474 (12) 0.0138 (9) 0.0117 (10) 0.0049 (9)
C8 0.0446 (12) 0.0401 (11) 0.0502 (12) 0.0178 (10) 0.0143 (10) 0.0119 (9)
C9 0.0486 (13) 0.0572 (14) 0.0464 (12) 0.0277 (11) 0.0131 (10) 0.0120 (10)
C10 0.0613 (16) 0.0627 (16) 0.0602 (15) 0.0345 (13) 0.0065 (13) 0.0108 (12)
C11 0.085 (2) 0.0545 (16) 0.0618 (16) 0.0309 (15) 0.0104 (15) 0.0065 (12)
C12 0.0669 (18) 0.0685 (18) 0.0484 (14) 0.0174 (14) 0.0123 (13) 0.0065 (12)
C13 0.0554 (16) 0.085 (2) 0.0592 (16) 0.0309 (15) −0.0002 (13) 0.0036 (14)
C14 0.0601 (16) 0.0658 (17) 0.0585 (15) 0.0349 (13) 0.0078 (12) 0.0094 (12)
C15 0.087 (2) 0.082 (2) 0.0660 (19) 0.0063 (18) 0.0072 (17) −0.0036 (16)

Geometric parameters (Å, °)

S1—O3 1.4226 (18) C5—H5B 0.9700
S1—O2 1.4250 (19) C6—C8 1.513 (3)
S1—O1 1.5678 (17) C6—H6 0.9800
S1—C9 1.755 (3) C8—H8A 0.9700
O1—C8 1.465 (3) C8—H8B 0.9700
O4—C7 1.313 (3) C9—C10 1.382 (4)
O4—H4O 0.89 (4) C9—C14 1.387 (4)
O5—C7 1.216 (3) C10—C11 1.378 (4)
C1—C2 1.524 (3) C10—H10 0.9300
C1—C6 1.525 (3) C11—C12 1.387 (4)
C1—H1A 0.9700 C11—H11 0.9300
C1—H1B 0.9700 C12—C13 1.377 (4)
C2—C3 1.518 (3) C12—C15 1.514 (4)
C2—H2A 0.9700 C13—C14 1.383 (4)
C2—H2B 0.9700 C13—H13 0.9300
C3—C7 1.505 (3) C14—H14 0.9300
C3—C4 1.531 (3) C15—H15A 0.9600
C3—H3 0.9800 C15—H15B 0.9600
C4—C5 1.520 (3) C15—H15C 0.9600
C4—H4A 0.9700 C15—H15D 0.9600
C4—H4B 0.9700 C15—H15E 0.9600
C5—C6 1.525 (3) C15—H15F 0.9600
C5—H5A 0.9700
O3—S1—O2 119.63 (12) O4—C7—C3 113.7 (2)
O3—S1—O1 104.45 (11) O1—C8—C6 108.88 (18)
O2—S1—O1 109.39 (11) O1—C8—H8A 109.9
O3—S1—C9 109.50 (12) C6—C8—H8A 109.9
O2—S1—C9 109.39 (12) O1—C8—H8B 109.9
O1—S1—C9 103.13 (10) C6—C8—H8B 109.9
C8—O1—S1 117.51 (13) H8A—C8—H8B 108.3
C7—O4—H4O 110 (2) C10—C9—C14 120.2 (3)
C2—C1—C6 111.4 (2) C10—C9—S1 119.55 (19)
C2—C1—H1A 109.4 C14—C9—S1 120.1 (2)
C6—C1—H1A 109.4 C11—C10—C9 119.9 (2)
C2—C1—H1B 109.4 C11—C10—H10 120.1
C6—C1—H1B 109.4 C9—C10—H10 120.1
H1A—C1—H1B 108.0 C10—C11—C12 120.7 (3)
C3—C2—C1 111.5 (2) C10—C11—H11 119.6
C3—C2—H2A 109.3 C12—C11—H11 119.6
C1—C2—H2A 109.3 C13—C12—C11 118.7 (3)
C3—C2—H2B 109.3 C13—C12—C15 121.2 (3)
C1—C2—H2B 109.3 C11—C12—C15 120.1 (3)
H2A—C2—H2B 108.0 C12—C13—C14 121.6 (3)
C7—C3—C2 112.18 (19) C12—C13—H13 119.2
C7—C3—C4 109.70 (19) C14—C13—H13 119.2
C2—C3—C4 111.24 (19) C13—C14—C9 118.9 (3)
C7—C3—H3 107.8 C13—C14—H14 120.5
C2—C3—H3 107.8 C9—C14—H14 120.5
C4—C3—H3 107.8 C12—C15—H15A 109.5
C5—C4—C3 111.32 (19) C12—C15—H15B 109.5
C5—C4—H4A 109.4 H15A—C15—H15B 109.5
C3—C4—H4A 109.4 C12—C15—H15C 109.5
C5—C4—H4B 109.4 H15A—C15—H15C 109.5
C3—C4—H4B 109.4 H15B—C15—H15C 109.5
H4A—C4—H4B 108.0 C12—C15—H15D 109.5
C4—C5—C6 112.09 (19) H15A—C15—H15D 141.1
C4—C5—H5A 109.2 H15B—C15—H15D 56.3
C6—C5—H5A 109.2 H15C—C15—H15D 56.3
C4—C5—H5B 109.2 C12—C15—H15E 109.5
C6—C5—H5B 109.2 H15A—C15—H15E 56.3
H5A—C5—H5B 107.9 H15B—C15—H15E 141.1
C8—C6—C5 108.55 (18) H15C—C15—H15E 56.3
C8—C6—C1 112.53 (19) H15D—C15—H15E 109.5
C5—C6—C1 110.45 (19) C12—C15—H15F 109.5
C8—C6—H6 108.4 H15A—C15—H15F 56.3
C5—C6—H6 108.4 H15B—C15—H15F 56.3
C1—C6—H6 108.4 H15C—C15—H15F 141.1
O5—C7—O4 122.8 (2) H15D—C15—H15F 109.5
O5—C7—C3 123.5 (2) H15E—C15—H15F 109.5
O3—S1—O1—C8 177.44 (16) C5—C6—C8—O1 173.23 (17)
O2—S1—O1—C8 48.24 (18) C1—C6—C8—O1 −64.2 (3)
C9—S1—O1—C8 −68.10 (17) O3—S1—C9—C10 37.0 (2)
C6—C1—C2—C3 56.1 (3) O2—S1—C9—C10 169.9 (2)
C1—C2—C3—C7 −178.2 (2) O1—S1—C9—C10 −73.7 (2)
C1—C2—C3—C4 −54.9 (3) O3—S1—C9—C14 −147.2 (2)
C7—C3—C4—C5 178.8 (2) O2—S1—C9—C14 −14.3 (3)
C2—C3—C4—C5 54.1 (3) O1—S1—C9—C14 102.0 (2)
C3—C4—C5—C6 −54.7 (3) C14—C9—C10—C11 0.0 (4)
C4—C5—C6—C8 179.1 (2) S1—C9—C10—C11 175.7 (2)
C4—C5—C6—C1 55.3 (3) C9—C10—C11—C12 −0.5 (4)
C2—C1—C6—C8 −177.1 (2) C10—C11—C12—C13 0.7 (5)
C2—C1—C6—C5 −55.6 (3) C10—C11—C12—C15 −178.4 (3)
C2—C3—C7—O5 13.6 (3) C11—C12—C13—C14 −0.4 (5)
C4—C3—C7—O5 −110.5 (3) C15—C12—C13—C14 178.7 (3)
C2—C3—C7—O4 −167.2 (2) C12—C13—C14—C9 −0.1 (4)
C4—C3—C7—O4 68.6 (3) C10—C9—C14—C13 0.2 (4)
S1—O1—C8—C6 147.88 (16) S1—C9—C14—C13 −175.4 (2)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O4—H4O···O5i 0.89 (4) 1.76 (4) 2.654 (3) 178 (3)

Symmetry codes: (i) −x, −y, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: WN2233).

References

  1. Ahmed, S. M., Budd, P. M., McKeown, N. B., Evans, K. P., Beaumont, G. L., Donaldson, C. & Brennan, C. M. (2001). Polymer, 42, 889–896.
  2. Bucourt, R. & Hainaut, D. (1965). Bull. Soc. Chim. Fr.5, 1366–1378.
  3. Dunitz, J. D. & Strickler, P. (1966). Helv. Chim. Acta, 49, 290–291.
  4. Grabchev, I., Chovelon, J. M., Bojinov, V. & Ivanova, G. (2003). Tetrahedron, 59, 9591–9598.
  5. Higashi, T. (1995). ABSCOR Rigaku Corporation,Tokyo, Japan.
  6. Koningsveld, H. van & Jansen, J. C. (1984). Acta Cryst. B40, 420–424.
  7. Luger, P., Plieth, K. & Ruban, G. (1972). Acta Cryst. B28, 706–710.
  8. Rigaku (2004). RAPID-AUTO Version 3.0. Rigaku Corporation, Tokyo, Japan.
  9. Sheldrick, G. M. (1997b). SHELXTL Version 5.0. Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA.
  10. Sheldrick, G. M. (2008). Acta Cryst A64, 112–122. [DOI] [PubMed]
  11. Wang, B.-B., Zhang, X., Jia, X.-R., Luo, Y.-F., Sun, Z., Yang, L., Ji, Y. & Wei, Y. (2004). Polymer, 45, 8395–8402.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536807068572/wn2233sup1.cif

e-64-0o405-sup1.cif (19.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536807068572/wn2233Isup2.hkl

e-64-0o405-Isup2.hkl (174.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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