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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Aug 20;64(Pt 9):o1789. doi: 10.1107/S1600536808026287

N′-(3-Phenyl­allyl­idene)isonicotino­hydrazide

Feng-Yu Bao a,*
PMCID: PMC2960596  PMID: 21201769

Abstract

The asymmetric unit of the title compound, C15H13N3O, contains two similar mol­ecules. Each mol­ecule is non-planar, as indicated by the dihedral angles between the pyridine and benzene rings of 45.2 (2) and 56.6 (2)°. The crystal structure is consolidated by inter­molecular N—H⋯O hydrogen bonds.

Related literature

For related literature, see: Kahwa et al. (1986); Qian et al. (2006); Santos et al. (2001).graphic file with name e-64-o1789-scheme1.jpg

Experimental

Crystal data

  • C15H13N3O

  • M r = 251.28

  • Monoclinic, Inline graphic

  • a = 12.608 (8) Å

  • b = 11.023 (7) Å

  • c = 10.044 (7) Å

  • β = 105.94 (3)°

  • V = 1342.2 (15) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 291 (2) K

  • 0.30 × 0.26 × 0.24 mm

Data collection

  • Bruker SMART APEX CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2000) T min = 0.98, T max = 0.98

  • 11645 measured reflections

  • 3110 independent reflections

  • 2784 reflections with I > 2σ(I)

  • R int = 0.044

Refinement

  • R[F 2 > 2σ(F 2)] = 0.059

  • wR(F 2) = 0.134

  • S = 1.01

  • 3110 reflections

  • 349 parameters

  • 2 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.20 e Å−3

  • Δρmin = −0.29 e Å−3

Data collection: SMART (Bruker, 2000); cell refinement: SMART; data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808026287/ez2136sup1.cif

e-64-o1789-sup1.cif (20.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808026287/ez2136Isup2.hkl

e-64-o1789-Isup2.hkl (152.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2A⋯O2i 0.86 (5) 2.19 (5) 3.050 (6) 174 (3)

Symmetry code: (i) Inline graphic.

supplementary crystallographic information

Comment

Interest in the chemistry of Schiff bases has increased considerably in recent years, mainly due to their novel properties and their application in the development of various proteins and enzymes (Kahwa et al., 1986; Santos et al., 2001). Structural information of Schiff base derivatives is useful in studying their coordination chemisty. As part of our research, we have synthesized the title compound (I) and report its crystal structure here.

The molecular structure is shown in Fig. 1. Each molecule is non-planar, with dihedral angles of 45.2 (2) and 56.6 (2)° between the pyridine ring and the benzene ring for the two molecules. Bond lengths and angles agree with those found for isonicotinohydrazide derivatives (Qian et al., 2006).

Intermolecular N—H···O hydrogen bonds link pairs of molecules.

Experimental

Pyridine-4-carboxylic acid hydrazide (1 mmol, 0.137 g) was dissolved in anhydrous methanol, whereafter H2SO4 (98%, 0.5 ml) was added and the mixture was stirred for several minutes at 351 K. A solution of cinnamaldehyde (1 mmol, 0.132 g) in methanol (8 ml) was then added dropwise and the mixture was stirred under reflux for 2 h. The product was isolated and recrystallized from dichloromethane, brown single crystals of (I) were obtained after 2 d.

Refinement

H atoms on N2 and N5 were identified by difference Fourier map and refined isotropically. All other H atoms were placed in calculated positions, with C-H=0.93Å (aromatic), N-H = 0.96Å, and with Uiso(H)=1.2Ueq(C,N). In the absence of significant anomalous scattering effects, 2686 Friedel pairs have been merged.

Figures

Fig. 1.

Fig. 1.

ORTEP plot of (I) showing the atom numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.

Crystal data

C15H13N3O F000 = 528
Mr = 251.28 Dx = 1.244 Mg m3
Monoclinic, Pc Mo Kα radiation λ = 0.71073 Å
Hall symbol: P -2yc Cell parameters from 940 reflections
a = 12.608 (8) Å θ = 2.5–20.5º
b = 11.023 (7) Å µ = 0.08 mm1
c = 10.044 (7) Å T = 291 (2) K
β = 105.94 (3)º Block, brown
V = 1342.2 (15) Å3 0.30 × 0.26 × 0.24 mm
Z = 4

Data collection

Bruker SMART APEX CCD area-detector diffractometer 3110 independent reflections
Radiation source: sealed tube 2784 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.044
T = 291(2) K θmax = 27.7º
φ and ω scans θmin = 1.7º
Absorption correction: multi-scan(SADABS; Bruker, 2000) h = −16→16
Tmin = 0.98, Tmax = 0.98 k = −13→14
11645 measured reflections l = −13→12

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.059 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.134   w = 1/[σ2(Fo2) + (0.05P)2 + 0.88P] where P = (Fo2 + 2Fc2)/3
S = 1.01 (Δ/σ)max < 0.001
3110 reflections Δρmax = 0.20 e Å3
349 parameters Δρmin = −0.29 e Å3
2 restraints Extinction correction: none
Primary atom site location: structure-invariant direct methods

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 1.2011 (4) 0.4816 (5) 0.8674 (5) 0.0472 (10)
H1 1.2238 0.5562 0.8420 0.057*
C2 1.2551 (4) 0.4303 (4) 0.9917 (5) 0.0457 (10)
H2 1.3139 0.4716 1.0505 0.055*
C3 1.2239 (4) 0.3174 (4) 1.0323 (5) 0.0417 (9)
H3 1.2609 0.2838 1.1173 0.050*
C4 1.1362 (4) 0.2566 (4) 0.9422 (4) 0.0418 (10)
H4 1.1148 0.1809 0.9666 0.050*
C5 1.0805 (4) 0.3081 (5) 0.8167 (4) 0.0469 (11)
H5 1.0219 0.2672 0.7571 0.056*
C6 1.1126 (3) 0.4217 (4) 0.7798 (5) 0.0421 (9)
C7 1.0508 (3) 0.4875 (4) 0.6585 (5) 0.0426 (10)
H7 1.0694 0.5672 0.6446 0.051*
C8 0.9646 (4) 0.4321 (4) 0.5637 (5) 0.0436 (10)
H8 0.9451 0.3521 0.5747 0.052*
C9 0.9049 (4) 0.5050 (4) 0.4446 (4) 0.0435 (10)
H9 0.9175 0.5870 0.4333 0.052*
C10 0.6810 (4) 0.4686 (4) 0.1451 (4) 0.0391 (9)
C11 0.5998 (4) 0.5425 (4) 0.0516 (4) 0.0438 (10)
C12 0.5471 (3) 0.5017 (4) −0.0823 (4) 0.0356 (8)
H12 0.5587 0.4233 −0.1093 0.043*
C13 0.4793 (4) 0.5778 (4) −0.1716 (5) 0.0413 (9)
H13 0.4438 0.5497 −0.2599 0.050*
C14 0.5136 (4) 0.7372 (4) −0.0082 (4) 0.0427 (9)
H14 0.5025 0.8165 0.0165 0.051*
C15 0.5845 (3) 0.6620 (4) 0.0872 (4) 0.0432 (10)
H15 0.6216 0.6914 0.1743 0.052*
C16 0.4052 (4) 0.0511 (4) −0.2985 (4) 0.0424 (9)
H16 0.4482 −0.0181 −0.2728 0.051*
C17 0.3238 (3) 0.0544 (4) −0.4232 (4) 0.0400 (9)
H17 0.3127 −0.0128 −0.4814 0.048*
C18 0.2588 (4) 0.1560 (4) −0.4623 (5) 0.0455 (10)
H18 0.2039 0.1569 −0.5459 0.055*
C19 0.2761 (4) 0.2580 (4) −0.3752 (4) 0.0417 (9)
H19 0.2328 0.3269 −0.4015 0.050*
C20 0.3577 (3) 0.2565 (4) −0.2498 (4) 0.0356 (8)
H20 0.3689 0.3242 −0.1923 0.043*
C21 0.4226 (4) 0.1536 (4) −0.2104 (4) 0.0462 (10)
C22 0.5026 (4) 0.1586 (4) −0.0775 (5) 0.0462 (10)
H22 0.5019 0.2227 −0.0175 0.055*
C23 0.5807 (4) 0.0677 (4) −0.0391 (4) 0.0433 (10)
H23 0.5931 0.0067 −0.0970 0.052*
C24 0.6411 (3) 0.0828 (4) 0.1081 (4) 0.0398 (9)
H24 0.6423 0.1533 0.1594 0.048*
C25 0.8300 (4) −0.1108 (5) 0.3489 (5) 0.0502 (11)
C26 0.8954 (4) −0.0909 (4) 0.4904 (5) 0.0441 (10)
C27 0.9750 (4) −0.0014 (4) 0.5288 (5) 0.0405 (9)
H27 0.9822 0.0570 0.4650 0.049*
C28 1.0442 (4) 0.0012 (5) 0.6632 (5) 0.0505 (11)
H28 1.0965 0.0623 0.6904 0.061*
C29 0.9555 (3) −0.1774 (4) 0.7183 (4) 0.0421 (9)
H29 0.9483 −0.2360 0.7819 0.051*
C30 0.8865 (3) −0.1796 (3) 0.5848 (4) 0.0337 (8)
H30 0.8341 −0.2407 0.5582 0.040*
N1 0.8334 (3) 0.4414 (3) 0.3586 (4) 0.0397 (8)
N2 0.7663 (3) 0.5206 (4) 0.2548 (4) 0.0423 (9)
H2A 0.777 (4) 0.598 (5) 0.259 (5) 0.051*
N3 0.4603 (3) 0.6964 (3) −0.1372 (3) 0.0392 (8)
N4 0.6918 (3) −0.0162 (3) 0.1548 (4) 0.0424 (8)
N5 0.7800 (3) −0.0023 (3) 0.2797 (3) 0.0368 (8)
H5A 0.833 (4) 0.042 (4) 0.259 (5) 0.044*
N6 1.0342 (3) −0.0891 (4) 0.7569 (4) 0.0491 (9)
O1 0.6774 (2) 0.3578 (3) 0.1322 (3) 0.0434 (7)
O2 0.8172 (2) −0.2090 (3) 0.2914 (3) 0.0440 (7)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.042 (2) 0.052 (3) 0.051 (3) −0.006 (2) 0.019 (2) 0.004 (2)
C2 0.042 (2) 0.048 (2) 0.049 (3) −0.0034 (19) 0.017 (2) −0.011 (2)
C3 0.043 (2) 0.044 (2) 0.043 (2) 0.0020 (18) 0.0214 (19) −0.0022 (18)
C4 0.048 (2) 0.042 (2) 0.042 (2) −0.0146 (18) 0.0227 (19) 0.0100 (17)
C5 0.037 (2) 0.071 (3) 0.035 (2) −0.014 (2) 0.0134 (17) −0.010 (2)
C6 0.0332 (18) 0.050 (2) 0.046 (2) 0.0070 (18) 0.0149 (17) −0.0088 (19)
C7 0.037 (2) 0.043 (2) 0.054 (3) 0.0071 (18) 0.0238 (19) −0.014 (2)
C8 0.040 (2) 0.041 (2) 0.053 (3) 0.0142 (18) 0.0167 (19) 0.0057 (19)
C9 0.051 (2) 0.050 (2) 0.0264 (19) 0.003 (2) 0.0053 (17) −0.0123 (18)
C10 0.044 (2) 0.036 (2) 0.040 (2) −0.0233 (18) 0.0151 (17) 0.0063 (17)
C11 0.054 (3) 0.041 (2) 0.038 (2) −0.006 (2) 0.0163 (19) −0.0013 (18)
C12 0.0331 (19) 0.038 (2) 0.043 (2) 0.0074 (16) 0.0221 (16) −0.0088 (16)
C13 0.042 (2) 0.046 (2) 0.040 (2) −0.0041 (19) 0.0172 (18) −0.0042 (18)
C14 0.048 (2) 0.042 (2) 0.037 (2) −0.0053 (19) 0.0103 (18) −0.0103 (18)
C15 0.041 (2) 0.056 (3) 0.032 (2) −0.0076 (19) 0.0092 (17) −0.0133 (18)
C16 0.051 (2) 0.045 (2) 0.031 (2) −0.005 (2) 0.0121 (17) 0.0038 (17)
C17 0.036 (2) 0.046 (2) 0.036 (2) −0.0121 (17) 0.0074 (17) −0.0079 (17)
C18 0.047 (2) 0.047 (2) 0.043 (2) −0.0120 (19) 0.0108 (19) −0.013 (2)
C19 0.049 (2) 0.043 (2) 0.034 (2) −0.0036 (19) 0.0128 (18) −0.0051 (17)
C20 0.0386 (19) 0.036 (2) 0.037 (2) −0.0144 (16) 0.0175 (16) 0.0037 (16)
C21 0.055 (3) 0.051 (3) 0.037 (2) −0.004 (2) 0.0198 (19) 0.0099 (19)
C22 0.046 (2) 0.044 (2) 0.051 (3) 0.0147 (19) 0.018 (2) −0.0061 (19)
C23 0.044 (2) 0.045 (2) 0.040 (2) 0.0018 (19) 0.0095 (18) −0.0135 (18)
C24 0.0314 (18) 0.052 (2) 0.037 (2) −0.0043 (17) 0.0113 (16) −0.0110 (18)
C25 0.050 (2) 0.052 (3) 0.054 (3) 0.013 (2) 0.022 (2) 0.003 (2)
C26 0.047 (2) 0.045 (2) 0.049 (3) 0.003 (2) 0.028 (2) 0.005 (2)
C27 0.038 (2) 0.046 (2) 0.044 (2) 0.0001 (17) 0.0225 (18) 0.0012 (18)
C28 0.050 (2) 0.063 (3) 0.038 (2) −0.011 (2) 0.0126 (19) −0.009 (2)
C29 0.040 (2) 0.047 (2) 0.044 (2) 0.0067 (18) 0.0202 (18) −0.0077 (18)
C30 0.0285 (16) 0.0339 (19) 0.044 (2) 0.0102 (14) 0.0190 (15) −0.0027 (16)
N1 0.0374 (17) 0.0327 (17) 0.0451 (19) −0.0052 (14) 0.0045 (14) 0.0001 (14)
N2 0.0305 (17) 0.045 (2) 0.0435 (19) −0.0151 (15) −0.0034 (14) 0.0138 (16)
N3 0.0488 (19) 0.0410 (19) 0.0321 (17) 0.0031 (16) 0.0182 (14) 0.0002 (15)
N4 0.055 (2) 0.0406 (19) 0.0303 (17) −0.0081 (17) 0.0093 (16) −0.0039 (15)
N5 0.0338 (17) 0.0399 (18) 0.0350 (18) −0.0151 (14) 0.0064 (14) −0.0011 (14)
N6 0.043 (2) 0.062 (2) 0.049 (2) −0.0020 (18) 0.0230 (17) −0.0041 (19)
O1 0.0396 (15) 0.0449 (17) 0.0474 (17) −0.0096 (13) 0.0152 (13) −0.0059 (13)
O2 0.0434 (15) 0.0455 (17) 0.0413 (16) 0.0001 (13) 0.0084 (12) 0.0034 (14)

Geometric parameters (Å, °)

C1—C2 1.369 (7) C16—H16 0.9300
C1—C6 1.385 (7) C17—C18 1.379 (7)
C1—H1 0.9300 C17—H17 0.9300
C2—C3 1.400 (6) C18—C19 1.405 (6)
C2—H2 0.9300 C18—H18 0.9300
C3—C4 1.394 (6) C19—C20 1.391 (6)
C3—H3 0.9300 C19—H19 0.9300
C4—C5 1.386 (6) C20—C21 1.391 (6)
C4—H4 0.9300 C20—H20 0.9300
C5—C6 1.397 (7) C21—C22 1.437 (6)
C5—H5 0.9300 C22—C23 1.383 (6)
C6—C7 1.447 (7) C22—H22 0.9300
C7—C8 1.375 (7) C23—C24 1.475 (6)
C7—H7 0.9300 C23—H23 0.9300
C8—C9 1.467 (6) C24—N4 1.287 (6)
C8—H8 0.9300 C24—H24 0.9300
C9—N1 1.273 (5) C25—O2 1.216 (6)
C9—H9 0.9300 C25—N5 1.439 (6)
C10—O1 1.228 (5) C25—C26 1.451 (7)
C10—N2 1.432 (5) C26—C27 1.385 (6)
C10—C11 1.437 (6) C26—C30 1.388 (6)
C11—C15 1.393 (6) C27—C28 1.391 (7)
C11—C12 1.400 (6) C27—H27 0.9300
C12—C13 1.347 (6) C28—N6 1.399 (7)
C12—H12 0.9300 C28—H28 0.9300
C13—N3 1.390 (6) C29—N6 1.368 (6)
C13—H13 0.9300 C29—C30 1.384 (6)
C14—N3 1.362 (5) C29—H29 0.9300
C14—C15 1.390 (7) C30—H30 0.9300
C14—H14 0.9300 N1—N2 1.442 (5)
C15—H15 0.9300 N2—H2A 0.86 (5)
C16—C17 1.385 (6) N4—N5 1.437 (5)
C16—C21 1.415 (7) N5—H5A 0.90 (5)
C2—C1—C6 119.7 (5) C16—C17—H17 119.6
C2—C1—H1 120.1 C17—C18—C19 119.6 (4)
C6—C1—H1 120.1 C17—C18—H18 120.2
C1—C2—C3 121.6 (4) C19—C18—H18 120.2
C1—C2—H2 119.2 C20—C19—C18 120.3 (4)
C3—C2—H2 119.2 C20—C19—H19 119.9
C4—C3—C2 118.4 (4) C18—C19—H19 119.9
C4—C3—H3 120.8 C21—C20—C19 119.9 (4)
C2—C3—H3 120.8 C21—C20—H20 120.1
C5—C4—C3 120.5 (4) C19—C20—H20 120.1
C5—C4—H4 119.8 C20—C21—C16 119.7 (4)
C3—C4—H4 119.8 C20—C21—C22 116.2 (4)
C4—C5—C6 119.9 (4) C16—C21—C22 124.1 (4)
C4—C5—H5 120.1 C23—C22—C21 119.7 (4)
C6—C5—H5 120.1 C23—C22—H22 120.1
C1—C6—C5 120.0 (4) C21—C22—H22 120.1
C1—C6—C7 116.7 (5) C22—C23—C24 109.2 (4)
C5—C6—C7 123.0 (4) C22—C23—H23 125.4
C8—C7—C6 120.0 (4) C24—C23—H23 125.4
C8—C7—H7 120.0 N4—C24—C23 109.7 (4)
C6—C7—H7 120.0 N4—C24—H24 125.1
C7—C8—C9 116.9 (4) C23—C24—H24 125.1
C7—C8—H8 121.5 O2—C25—N5 121.8 (5)
C9—C8—H8 121.5 O2—C25—C26 124.4 (4)
N1—C9—C8 111.1 (4) N5—C25—C26 113.8 (4)
N1—C9—H9 124.4 C27—C26—C30 120.0 (4)
C8—C9—H9 124.4 C27—C26—C25 123.7 (4)
O1—C10—N2 118.5 (4) C30—C26—C25 115.6 (4)
O1—C10—C11 119.7 (4) C26—C27—C28 119.9 (4)
N2—C10—C11 121.7 (4) C26—C27—H27 120.1
C15—C11—C12 119.1 (4) C28—C27—H27 120.1
C15—C11—C10 119.5 (4) C27—C28—N6 119.3 (4)
C12—C11—C10 120.7 (4) C27—C28—H28 120.3
C13—C12—C11 119.1 (4) N6—C28—H28 120.3
C13—C12—H12 120.4 N6—C29—C30 120.1 (4)
C11—C12—H12 120.4 N6—C29—H29 120.0
C12—C13—N3 122.8 (4) C30—C29—H29 120.0
C12—C13—H13 118.6 C29—C30—C26 120.2 (4)
N3—C13—H13 118.6 C29—C30—H30 119.9
N3—C14—C15 121.0 (4) C26—C30—H30 119.9
N3—C14—H14 119.5 C9—N1—N2 108.8 (4)
C15—C14—H14 119.5 C10—N2—N1 118.8 (3)
C14—C15—C11 119.7 (4) C10—N2—H2A 121 (3)
C14—C15—H15 120.1 N1—N2—H2A 121 (3)
C11—C15—H15 120.1 C14—N3—C13 118.2 (4)
C17—C16—C21 119.6 (4) C24—N4—N5 114.5 (3)
C17—C16—H16 120.2 N4—N5—C25 117.7 (4)
C21—C16—H16 120.2 N4—N5—H5A 108 (3)
C18—C17—C16 120.9 (4) C25—N5—H5A 108 (3)
C18—C17—H17 119.6 C29—N6—C28 120.5 (4)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N2—H2A···O2i 0.86 (5) 2.19 (5) 3.050 (6) 174 (3)

Symmetry codes: (i) x, y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: EZ2136).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808026287/ez2136sup1.cif

e-64-o1789-sup1.cif (20.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808026287/ez2136Isup2.hkl

e-64-o1789-Isup2.hkl (152.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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