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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Aug 13;64(Pt 9):o1747. doi: 10.1107/S1600536808025464

Bis(1,2,3,4-tetra­hydro­quinolin-6-yl)methane

Li Shen a,*, Qi Liu a, Hai-Jun Shen a
PMCID: PMC2960691  PMID: 21201729

Abstract

The asymmetric unit of the title compound, C19H22N2, contains one half-mol­ecule. The 1,2,3,4-tetra­hydro­quinoline units are linked by a methyl­ene bridge, which lies on a twofold rotation axis. The non-aromatic ring adopts a flattened-boat conformation. The dihedral angle between the two symmetry-related benzene rings is 64.03 (7)°.

Related literature

For general background, see: Xiao et al. (2008a ,b ,c ); Xiao et al. (2007a ,b ); Xue et al. (2007). For ring conformation puckering parameters, see: Cremer & Pople (1975).graphic file with name e-64-o1747-scheme1.jpg

Experimental

Crystal data

  • C19H22N2

  • M r = 278.39

  • Orthorhombic, Inline graphic

  • a = 17.515 (3) Å

  • b = 29.660 (4) Å

  • c = 5.7678 (8) Å

  • V = 2996.2 (8) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.07 mm−1

  • T = 292 (2) K

  • 0.30 × 0.20 × 0.20 mm

Data collection

  • Enraf–Nonius CAD-4 diffractometer

  • Absorption correction: ψ scan (North et al., 1968) T min = 0.979, T max = 0.986

  • 4545 measured reflections

  • 814 independent reflections

  • 773 reflections with I > 2σ(I)

  • R int = 0.073

Refinement

  • R[F 2 > 2σ(F 2)] = 0.048

  • wR(F 2) = 0.138

  • S = 1.07

  • 814 reflections

  • 100 parameters

  • 2 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.28 e Å−3

  • Δρmin = −0.21 e Å−3

Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808025464/hk2506sup1.cif

e-64-o1747-sup1.cif (14.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808025464/hk2506Isup2.hkl

e-64-o1747-Isup2.hkl (40.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

The work was financed by the Natural Science Foundation of Jiangsu Province (grant No. BK2007081).

supplementary crystallographic information

Comment

Nitrogen heterocyclic compounds show diverse biological activities such as antiproliferative (Xiao et al., 2008a,b), antibacterial (Xiao et al., 2007a; Xue et al., 2007; Xiao et al., 2008c), and urease inhibitory (Xiao et al., 2007b) activities. The title compound is a heterocyclic compound, which may be used for screening the biological activities. We report herein its crystal structure.

The asymmetric unit of the title compound (Fig. 1) contains one-half molecule. 1,2,3,4-Tetrahydroquinoline moieties are joined by a methylene bridge. Ring A (N1/C2-C4/C9/C10) adopts flattened-boat [φ = 126.28 (2)°, θ = 26.77 (3)°] conformation, having total puckering amplitude, QT, of 0.448 (3) Å (Cremer & Pople, 1975). The dihedral angle between the two symmetry related phenyl rings is 64.03 (7)°.

Experimental

Heating of 4,4'-methylenedibenzenamine (2 g), bis(4-nitrophenyl)methane (0.5 g), H3AsO4 (1.5 g), concentrated H2SO4 (3 ml), and glycerol (8.6 ml) at 413 K for 5 h, addition of water, removal of resinous matter, making alkalization with NaOH, taking up in ether, dehydration with K2CO3, and recrystallization of the residue from alcohol gives diquinolin-6-ylmethane. The resulting product (1 g) was subsequently heated with Sn (5.5 g) and HCl (22 ml, 32%) in a water bath for 8 h, addition of water, precipitation of the Sn as Sn(OH)2 by NaOH, taking up in ether, and drying with K2CO3, gives the title compound (yield; 0.9 g), which was recrystallized from petroleum ether-ethyl acetate to give colorless prisms.

Refinement

H1 atom (for bridging CH2) was located in difference syntheses and refined isotropically [C-H = 0.97 (2) Å and Uiso(H) = 0.067 (10) Å2]. The remaining H atoms were positioned geometrically, with N-H = 0.86 Å (for NH) and C-H = 0.93 and 0.97 Å for aromatic and methylene H, respectively, and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title molecule, with the atom-numbering scheme [symmetry code: (a) -x, 1 - y, z].

Crystal data

C19H22N2 F000 = 1200
Mr = 278.39 Dx = 1.234 Mg m3
Orthorhombic, Fdd2 Mo Kα radiation λ = 0.71073 Å
Hall symbol: F 2 -2d Cell parameters from 1297 reflections
a = 17.515 (3) Å θ = 2.9–25.2º
b = 29.660 (4) Å µ = 0.07 mm1
c = 5.7678 (8) Å T = 292 (2) K
V = 2996.2 (8) Å3 Prism, colorless
Z = 8 0.30 × 0.20 × 0.20 mm

Data collection

Enraf–Nonius CAD-4 diffractometer 814 independent reflections
Radiation source: fine-focus sealed tube 773 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.073
T = 292(2) K θmax = 26.0º
ω/2θ scans θmin = 2.7º
Absorption correction: ψ scan(North et al., 1968) h = −21→21
Tmin = 0.979, Tmax = 0.986 k = −36→32
4545 measured reflections l = −7→6

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.138   w = 1/[σ2(Fo2) + (0.0996P)2 + 0.9957P] where P = (Fo2 + 2Fc2)/3
S = 1.08 (Δ/σ)max < 0.001
814 reflections Δρmax = 0.28 e Å3
100 parameters Δρmin = −0.21 e Å3
2 restraints Extinction correction: none
Primary atom site location: structure-invariant direct methods

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
N1 0.26094 (12) 0.44383 (8) 1.0848 (5) 0.0605 (7)
H11A 0.2700 0.4566 1.2159 0.073*
C1 0.0000 0.5000 0.5624 (6) 0.0519 (9)
H1 0.0128 (16) 0.5254 (7) 0.464 (5) 0.067 (10)*
C2 0.31123 (16) 0.40914 (9) 1.0048 (7) 0.0637 (9)
H2A 0.3360 0.3951 1.1368 0.076*
H2B 0.3505 0.4224 0.9080 0.076*
C3 0.27005 (17) 0.37452 (10) 0.8715 (8) 0.0662 (9)
H3A 0.2357 0.3584 0.9740 0.079*
H3B 0.3064 0.3530 0.8094 0.079*
C4 0.22470 (16) 0.39493 (9) 0.6743 (6) 0.0579 (8)
H4A 0.2595 0.4045 0.5530 0.070*
H4B 0.1911 0.3722 0.6097 0.070*
C5 0.11375 (13) 0.44942 (7) 0.6314 (5) 0.0415 (6)
H5 0.1004 0.4345 0.4954 0.050*
C6 0.06877 (12) 0.48523 (8) 0.7038 (5) 0.0407 (6)
C7 0.09023 (12) 0.50718 (8) 0.9058 (5) 0.0434 (6)
H7 0.0615 0.5315 0.9581 0.052*
C8 0.15365 (13) 0.49360 (8) 1.0313 (5) 0.0435 (6)
H8 0.1667 0.5088 1.1667 0.052*
C9 0.19817 (12) 0.45735 (7) 0.9568 (5) 0.0384 (5)
C10 0.17797 (12) 0.43464 (7) 0.7524 (5) 0.0390 (6)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
N1 0.0578 (13) 0.0610 (13) 0.0628 (17) 0.0115 (10) −0.0273 (12) −0.0153 (13)
C1 0.0451 (19) 0.068 (2) 0.042 (2) 0.0156 (17) 0.000 0.000
C2 0.0537 (15) 0.0635 (16) 0.074 (2) 0.0170 (11) −0.0201 (16) 0.0025 (16)
C3 0.0623 (16) 0.0582 (15) 0.078 (2) 0.0198 (12) −0.0097 (17) −0.0042 (16)
C4 0.0622 (16) 0.0558 (14) 0.0558 (18) 0.0202 (12) −0.0111 (15) −0.0126 (14)
C5 0.0420 (12) 0.0442 (11) 0.0384 (13) 0.0016 (9) −0.0014 (11) −0.0069 (10)
C6 0.0324 (10) 0.0460 (10) 0.0437 (13) 0.0024 (8) 0.0016 (10) 0.0000 (11)
C7 0.0383 (11) 0.0416 (11) 0.0504 (15) 0.0045 (9) 0.0061 (10) −0.0052 (11)
C8 0.0440 (12) 0.0432 (11) 0.0433 (14) −0.0040 (9) −0.0018 (11) −0.0113 (11)
C9 0.0345 (11) 0.0392 (10) 0.0416 (13) −0.0032 (8) −0.0034 (10) 0.0013 (10)
C10 0.0398 (11) 0.0375 (10) 0.0398 (12) 0.0008 (8) −0.0007 (10) −0.0036 (11)

Geometric parameters (Å, °)

N1—C2 1.431 (3) C4—H4B 0.9700
N1—H11A 0.8600 C5—C6 1.387 (3)
C1—C6 1.519 (3) C5—C10 1.394 (3)
C1—C6i 1.519 (3) C5—H5 0.9300
C1—H1 0.97 (2) C7—C6 1.386 (4)
C2—C3 1.472 (4) C7—H7 0.9300
C2—H2A 0.9700 C8—C7 1.386 (3)
C2—H2B 0.9700 C8—H8 0.9300
C3—H3A 0.9700 C9—N1 1.384 (3)
C3—H3B 0.9700 C9—C8 1.396 (3)
C4—C3 1.514 (4) C9—C10 1.403 (4)
C4—H4A 0.9700 C10—C4 1.503 (3)
C9—N1—C2 121.7 (3) C10—C4—H4B 109.2
C9—N1—H11A 119.2 C3—C4—H4B 109.2
C2—N1—H11A 119.2 H4A—C4—H4B 107.9
C6—C1—C6i 115.1 (3) C6—C5—C10 123.3 (2)
C6—C1—H1 110.8 (18) C6—C5—H5 118.4
C6i—C1—H1 105.9 (19) C10—C5—H5 118.4
N1—C2—C3 111.6 (2) C7—C6—C5 117.3 (2)
N1—C2—H2A 109.3 C7—C6—C1 122.0 (2)
C3—C2—H2A 109.3 C5—C6—C1 120.6 (2)
N1—C2—H2B 109.3 C8—C7—C6 121.3 (2)
C3—C2—H2B 109.3 C8—C7—H7 119.3
H2A—C2—H2B 108.0 C6—C7—H7 119.3
C2—C3—C4 111.8 (2) C7—C8—C9 120.7 (2)
C2—C3—H3A 109.3 C7—C8—H8 119.6
C4—C3—H3A 109.3 C9—C8—H8 119.6
C2—C3—H3B 109.3 N1—C9—C8 120.2 (2)
C4—C3—H3B 109.3 N1—C9—C10 120.6 (2)
H3A—C3—H3B 107.9 C8—C9—C10 119.2 (2)
C10—C4—C3 112.0 (2) C5—C10—C9 118.2 (2)
C10—C4—H4A 109.2 C5—C10—C4 122.4 (2)
C3—C4—H4A 109.2 C9—C10—C4 119.4 (2)
C9—N1—C2—C3 −33.5 (4) C9—C8—C7—C6 0.3 (4)
C6i—C1—C6—C7 −39.05 (19) C8—C9—N1—C2 −175.1 (2)
C6i—C1—C6—C5 142.3 (3) C10—C9—N1—C2 5.6 (4)
N1—C2—C3—C4 54.2 (4) N1—C9—C8—C7 −179.4 (2)
C10—C4—C3—C2 −48.1 (4) C10—C9—C8—C7 0.0 (4)
C10—C5—C6—C7 0.6 (4) N1—C9—C10—C5 179.4 (2)
C10—C5—C6—C1 179.3 (2) C8—C9—C10—C5 0.0 (3)
C6—C5—C10—C9 −0.3 (4) N1—C9—C10—C4 0.7 (4)
C6—C5—C10—C4 178.3 (2) C8—C9—C10—C4 −178.6 (2)
C8—C7—C6—C5 −0.6 (4) C5—C10—C4—C3 −157.7 (2)
C8—C7—C6—C1 −179.2 (2) C9—C10—C4—C3 20.9 (4)

Symmetry codes: (i) −x, −y+1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HK2506).

References

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  2. Enraf–Nonius (1989). CAD-4 Software Enraf–Nonius, Delft, The Netherlands.
  3. Harms, K. & Wocadlo, S. (1995). XCAD4 University of Marburg, Germany.
  4. North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
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  7. Xiao, Z.-P., Fang, R.-Q., Li, H.-Q., Shi, L., Xue, J.-Y., Zheng, Y. & Zhu, H.-L. (2008c). Eur. J. Med. Chem In the press, doi: 10.1016/j.ejmech.2007.11.026. [DOI] [PubMed]
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808025464/hk2506sup1.cif

e-64-o1747-sup1.cif (14.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808025464/hk2506Isup2.hkl

e-64-o1747-Isup2.hkl (40.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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