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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Feb 6;64(Pt 3):o554. doi: 10.1107/S1600536808003309

Racemic 4-(4-tert-butyl­phen­yl)-2,6-dimethyl­cyclo­hex-3-enecarboxylic acid

Songwen Xie a, Caryn R O’Hearn a, Paul D Robinson b,*
PMCID: PMC2960795  PMID: 21201897

Abstract

The chirality of the title compound, C19H26O2, is solely generated by the presence of the double bond in the cyclo­hexene ring. This compound was synthesized to study the inter­action of the two enanti­omers in the solid state. The resultant racemate is made up of carboxylic acid RS dimers. Inter­molecular O—H⋯O hydrogen bonds produce centrosymmetric R 2 2(8) rings which dimerize the two chiral enanti­omers through their carboxyl groups.

Related literature

In similar compounds previously reported (Xie et al., 2002, 2007a ), the racemates also consist of carboxylic acid RS dimers. For related literature, see: Xie et al. (2007b , 2004); Bernstein et al. (1995).graphic file with name e-64-0o554-scheme1.jpg

Experimental

Crystal data

  • C19H26O2

  • M r = 286.40

  • Monoclinic, Inline graphic

  • a = 24.818 (4) Å

  • b = 9.4674 (18) Å

  • c = 7.0105 (12) Å

  • β = 95.799 (5)°

  • V = 1638.8 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.07 mm−1

  • T = 100 (2) K

  • 0.36 × 0.29 × 0.09 mm

Data collection

  • Bruker Kappa APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2005) T min = 0.793, T max = 0.993

  • 24559 measured reflections

  • 2912 independent reflections

  • 2230 reflections with I > 2σ(I)

  • R int = 0.062

Refinement

  • R[F 2 > 2σ(F 2)] = 0.085

  • wR(F 2) = 0.244

  • S = 1.15

  • 2912 reflections

  • 196 parameters

  • H-atom parameters constrained

  • Δρmax = 0.36 e Å−3

  • Δρmin = −0.34 e Å−3

Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT (Bruker, 2005); data reduction: SAINT and SADABS (Bruker, 2005); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: LS in TEXSAN (Molecular Structure Corporation, 1997) and SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97 and PLATON.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808003309/om2210sup1.cif

e-64-0o554-sup1.cif (18.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808003309/om2210Isup2.hkl

e-64-0o554-Isup2.hkl (143.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2⋯O1i 0.82 1.88 2.702 (4) 175

Symmetry code: (i) Inline graphic.

Acknowledgments

SX and CO are grateful to the departmental fund and for a Grant-in-Aid for Faculty Research from Indiana University Kokomo, as well as a Senior Research Grant from Indiana Academy of Science. The authors thank Professor Nigam P. Rath of the University of Missouri – St. Louis for kindly collecting the low-temperature data set using a diffractometer whose purchase was made possible by funding from the National Science Foundation (CHE-0420497).

supplementary crystallographic information

Comment

The title carboxylic acid, the structure of whose single enantiomer is unknown, was prepared to study the interaction of the two enantiomers in the solid state. We have previously reported the structure of its precursor, which is achiral and also forms hydrogen-bonded dimers (Xie et al., 2007b). The chirality of the title compound is solely generated by the presence of the double bond in the cyclohexene ring (Xie et al., 2004). The resultant racemate is made up of carboxylic acid RS dimers. The structure and atom numbering are shown in Fig. 1, which illustrates the half-chair conformation of the cyclohexene ring. The torsion angles involving atoms C2, C3, C4, C5, and C6 are all near 180°, as are those involving atoms C8, C2, C1, C6, and C9. The carboxyl group is almost perpendicular to the cyclohexene ring with an angle of 81.6 (5) ° between the O1—C7—O2 plane and the C1—C6 ring. The double bond between C3—C4 is not fully conjugated as shown by the C3—C4—C5 plane to benzene ring angle of 30.4 (5) °.

Fig. 2 shows the hydrogen bonding scheme and molecular packing. Atom O2 acts as a donor in an intermolecular hydrogen bond to atom O1. Inversion of this interaction across (1/2, 1/2, 1/2) produces an R22(8) ring (Bernstein et al., 1995), thus creating a hydrogen-bonded RS dimer. There is no evidence to suggest that weak directional interactions interconnect the dimers. Hydrogen bond geometry is given in Table 1.

Experimental

The title carboxylic acid was synthesized following a similar method previously reported by Xie et al., 2002. Purified compound was recrystallized from hexane-ethyl acetate as colorless crystals (m.p. 467–468 K).

Refinement

The rotational orientations of the methyl H atoms were refined by the circular Fourier method available in SHELXL97 (Sheldrick, 2008); the hydroxyl H atom position was determined in a similar manner. All H atoms were treated as riding with C/O—H distances ranging from 0.82 to 0.98 Å and Uiso(H) values equal to 1.5 (hydroxyl and methyl H atoms) or 1.2 times (all other H atoms) Ueq of the parent atom. The crystal diffracted poorly resulting in a relatively low accuracy refinement.

Figures

Fig. 1.

Fig. 1.

The molecular structure and atom numbering scheme, with displacement ellipsoids drawn at the 50% probablilty level.

Fig. 2.

Fig. 2.

Molecular packing and hydrogen bonding as viewed down [001]. Dashed lines represent hydrogen bonds. Most H atoms not involved in hydrogen bonding have been omitted to improve clarity. [Symmetry code: (i) -x + 1, -y + 1, -z + 1.]

Crystal data

C19H26O2 F000 = 624
Mr = 286.40 Dx = 1.161 Mg m3
Monoclinic, P21/c Melting point = 467–468 K
Hall symbol: -P 2ybc Mo Kα radiation λ = 0.71069 Å
a = 24.818 (4) Å Cell parameters from 5539 reflections
b = 9.4674 (18) Å θ = 3.3–25.0º
c = 7.0105 (12) Å µ = 0.07 mm1
β = 95.799 (5)º T = 100 (2) K
V = 1638.8 (5) Å3 Plate, colorless
Z = 4 0.36 × 0.29 × 0.09 mm

Data collection

Bruker Kappa-APEXII CCD diffractometer 2912 independent reflections
Radiation source: X-ray tube 2230 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.062
T = 100(2) K θmax = 25.1º
φ and ω scans θmin = 1.6º
Absorption correction: multi-scan(SADABS; Bruker, 2005) h = −29→29
Tmin = 0.793, Tmax = 0.993 k = −11→11
24559 measured reflections l = −8→8

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.085 H-atom parameters constrained
wR(F2) = 0.244   w = 1/[σ2(Fo2) + (0.0701P)2 + 6.4307P] where P = (Fo2 + 2Fc2)/3
S = 1.15 (Δ/σ)max < 0.001
2912 reflections Δρmax = 0.36 e Å3
196 parameters Δρmin = −0.34 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.44630 (12) 0.4071 (3) 0.5431 (5) 0.0292 (8)
O2 0.46014 (12) 0.6355 (3) 0.6148 (5) 0.0292 (8)
H2 0.4875 0.6225 0.5606 0.044*
C1 0.38217 (16) 0.5270 (4) 0.7216 (6) 0.0185 (9)
H1 0.3818 0.6204 0.7818 0.022*
C2 0.38377 (16) 0.4141 (4) 0.8808 (6) 0.0196 (9)
H2A 0.3872 0.3212 0.8215 0.024*
C3 0.33177 (17) 0.4167 (5) 0.9728 (6) 0.0264 (10)
H3 0.3321 0.3814 1.0967 0.032*
C4 0.28418 (16) 0.4675 (4) 0.8859 (5) 0.0169 (9)
C5 0.28100 (17) 0.5288 (5) 0.6930 (6) 0.0254 (10)
H5A 0.2737 0.6290 0.7038 0.030*
H5B 0.2501 0.4872 0.6175 0.030*
C6 0.33030 (16) 0.5119 (5) 0.5815 (6) 0.0201 (9)
H6 0.3296 0.4172 0.5249 0.024*
C7 0.43253 (17) 0.5160 (5) 0.6182 (6) 0.0222 (10)
C8 0.43195 (18) 0.4343 (5) 1.0310 (6) 0.0289 (11)
H8A 0.4325 0.5299 1.0768 0.043*
H8B 0.4649 0.4149 0.9748 0.043*
H8C 0.4288 0.3708 1.1361 0.043*
C9 0.32793 (19) 0.6213 (5) 0.4201 (6) 0.0295 (11)
H9A 0.2949 0.6096 0.3377 0.044*
H9B 0.3583 0.6084 0.3473 0.044*
H9C 0.3291 0.7146 0.4742 0.044*
C10 0.23456 (15) 0.4701 (4) 0.9897 (5) 0.0155 (8)
C11 0.22526 (16) 0.3688 (4) 1.1286 (6) 0.0188 (9)
H11 0.2501 0.2961 1.1543 0.023*
C12 0.18002 (16) 0.3744 (4) 1.2283 (6) 0.0193 (9)
H12 0.1754 0.3056 1.3199 0.023*
C13 0.14075 (16) 0.4812 (4) 1.1952 (6) 0.0184 (9)
C14 0.15024 (17) 0.5810 (5) 1.0570 (6) 0.0210 (9)
H14 0.1253 0.6536 1.0310 0.025*
C15 0.19560 (16) 0.5761 (5) 0.9565 (6) 0.0208 (9)
H15 0.2002 0.6450 0.8649 0.025*
C16 0.09164 (16) 0.4845 (4) 1.3099 (5) 0.0180 (9)
C17 0.05339 (17) 0.6074 (5) 1.2524 (6) 0.0243 (10)
H17A 0.0725 0.6951 1.2741 0.036*
H17B 0.0232 0.6049 1.3279 0.036*
H17C 0.0405 0.5994 1.1190 0.036*
C18 0.05936 (17) 0.3457 (5) 1.2774 (6) 0.0254 (10)
H18A 0.0473 0.3358 1.1436 0.038*
H18B 0.0286 0.3478 1.3500 0.038*
H18C 0.0821 0.2672 1.3184 0.038*
C19 0.11093 (18) 0.4982 (5) 1.5252 (6) 0.0234 (10)
H19A 0.1315 0.4160 1.5670 0.035*
H19B 0.0801 0.5065 1.5967 0.035*
H19C 0.1332 0.5808 1.5458 0.035*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0299 (17) 0.0191 (17) 0.0421 (19) −0.0048 (14) 0.0203 (14) −0.0079 (14)
O2 0.0269 (18) 0.0221 (17) 0.0423 (19) −0.0054 (14) 0.0215 (15) −0.0045 (14)
C1 0.021 (2) 0.015 (2) 0.021 (2) −0.0007 (17) 0.0055 (17) −0.0055 (17)
C2 0.020 (2) 0.017 (2) 0.023 (2) 0.0000 (18) 0.0073 (17) 0.0010 (17)
C3 0.026 (2) 0.026 (2) 0.029 (2) 0.004 (2) 0.0145 (19) 0.0088 (19)
C4 0.020 (2) 0.012 (2) 0.019 (2) −0.0038 (17) 0.0034 (16) −0.0011 (16)
C5 0.019 (2) 0.036 (3) 0.022 (2) −0.007 (2) 0.0055 (17) 0.0002 (19)
C6 0.023 (2) 0.020 (2) 0.018 (2) −0.0015 (18) 0.0058 (17) −0.0021 (17)
C7 0.024 (2) 0.020 (2) 0.023 (2) −0.0027 (19) 0.0079 (18) −0.0017 (18)
C8 0.028 (2) 0.027 (3) 0.032 (2) −0.004 (2) 0.0022 (19) 0.005 (2)
C9 0.034 (3) 0.031 (3) 0.025 (2) −0.001 (2) 0.0059 (19) 0.0080 (19)
C10 0.0137 (19) 0.016 (2) 0.0166 (19) −0.0021 (17) 0.0015 (15) −0.0039 (16)
C11 0.018 (2) 0.016 (2) 0.022 (2) 0.0001 (17) 0.0020 (16) 0.0003 (16)
C12 0.021 (2) 0.018 (2) 0.020 (2) −0.0021 (17) 0.0074 (16) 0.0030 (16)
C13 0.017 (2) 0.016 (2) 0.021 (2) −0.0036 (17) −0.0008 (16) −0.0031 (17)
C14 0.022 (2) 0.019 (2) 0.022 (2) 0.0035 (18) 0.0040 (17) 0.0032 (17)
C15 0.021 (2) 0.019 (2) 0.021 (2) −0.0008 (18) −0.0009 (17) 0.0040 (17)
C16 0.019 (2) 0.018 (2) 0.018 (2) 0.0020 (17) 0.0046 (16) 0.0004 (16)
C17 0.020 (2) 0.027 (3) 0.026 (2) 0.0053 (19) 0.0032 (17) 0.0034 (19)
C18 0.020 (2) 0.026 (2) 0.032 (2) −0.0058 (19) 0.0082 (18) −0.0069 (19)
C19 0.023 (2) 0.023 (2) 0.024 (2) 0.0021 (19) 0.0011 (17) −0.0031 (18)

Geometric parameters (Å, °)

O1—C7 1.222 (5) C2—H2A 0.9800
O2—C7 1.325 (5) C3—H3 0.9300
C1—C7 1.510 (5) C5—H5A 0.9700
C1—C2 1.544 (6) C5—H5B 0.9700
C1—C6 1.545 (6) C6—H6 0.9800
C2—C3 1.500 (5) C8—H8A 0.9600
C2—C8 1.523 (6) C8—H8B 0.9600
C3—C4 1.361 (6) C8—H8C 0.9600
C4—C5 1.466 (6) C9—H9A 0.9600
C4—C10 1.493 (5) C9—H9B 0.9600
C5—C6 1.525 (5) C9—H9C 0.9600
C6—C9 1.531 (6) C11—H11 0.9300
C10—C15 1.397 (6) C12—H12 0.9300
C10—C11 1.402 (6) C14—H14 0.9300
C11—C12 1.382 (5) C15—H15 0.9300
C12—C13 1.407 (6) C17—H17A 0.9600
C13—C14 1.390 (6) C17—H17B 0.9600
C13—C16 1.527 (5) C17—H17C 0.9600
C14—C15 1.388 (6) C18—H18A 0.9600
C16—C17 1.530 (6) C18—H18B 0.9600
C16—C19 1.542 (6) C18—H18C 0.9600
C16—C18 1.544 (6) C19—H19A 0.9600
O2—H2 0.8200 C19—H19B 0.9600
C1—H1 0.9800 C19—H19C 0.9600
C7—C1—C2 109.7 (3) C2—C3—H3 118.0
C7—C1—C6 111.4 (3) C4—C5—H5A 108.0
C2—C1—C6 110.7 (3) C6—C5—H5A 108.0
C3—C2—C8 110.5 (4) C4—C5—H5B 108.0
C3—C2—C1 109.8 (3) C6—C5—H5B 108.0
C8—C2—C1 112.0 (3) H5A—C5—H5B 107.2
C4—C3—C2 124.0 (4) C2—C8—H8A 109.5
C3—C4—C5 121.1 (4) C2—C8—H8B 109.5
C3—C4—C10 120.6 (4) C2—C8—H8C 109.5
C5—C4—C10 118.2 (4) H8A—C8—H8B 109.5
C4—C5—C6 117.4 (4) H8A—C8—H8C 109.5
C5—C6—C9 109.6 (4) H8B—C8—H8C 109.5
C5—C6—C1 108.9 (3) C6—C9—H9A 109.5
C9—C6—C1 112.0 (3) C6—C9—H9B 109.5
C5—C6—H6 108.8 C6—C9—H9C 109.5
C9—C6—H6 108.8 H9A—C9—H9B 109.5
C1—C6—H6 108.8 H9A—C9—H9C 109.5
O1—C7—O2 123.1 (4) H9B—C9—H9C 109.5
O1—C7—C1 123.1 (4) C12—C11—H11 119.2
O2—C7—C1 113.8 (3) C10—C11—H11 119.2
C15—C10—C11 116.6 (4) C11—C12—H12 119.0
C15—C10—C4 121.5 (4) C13—C12—H12 119.0
C11—C10—C4 122.0 (4) C15—C14—H14 118.9
C12—C11—C10 121.6 (4) C13—C14—H14 118.9
C11—C12—C13 121.9 (4) C14—C15—H15 119.2
C14—C13—C12 116.1 (4) C10—C15—H15 119.2
C14—C13—C16 123.6 (4) C16—C17—H17A 109.5
C12—C13—C16 120.2 (4) C16—C17—H17B 109.5
C15—C14—C13 122.3 (4) H17A—C17—H17B 109.5
C14—C15—C10 121.5 (4) C16—C17—H17C 109.5
C13—C16—C17 112.5 (3) H17A—C17—H17C 109.5
C13—C16—C19 109.4 (3) H17B—C17—H17C 109.5
C17—C16—C19 108.5 (3) C16—C18—H18A 109.5
C13—C16—C18 109.6 (3) C16—C18—H18B 109.5
C17—C16—C18 108.0 (3) H18A—C18—H18B 109.5
C19—C16—C18 108.8 (3) C16—C18—H18C 109.5
C7—O2—H2 109.5 H18A—C18—H18C 109.5
C7—C1—H1 108.3 H18B—C18—H18C 109.5
C2—C1—H1 108.3 C16—C19—H19A 109.5
C6—C1—H1 108.3 C16—C19—H19B 109.5
C3—C2—H2A 108.1 H19A—C19—H19B 109.5
C8—C2—H2A 108.1 C16—C19—H19C 109.5
C1—C2—H2A 108.1 H19A—C19—H19C 109.5
C4—C3—H3 118.0 H19B—C19—H19C 109.5
C2—C3—C4—C5 −2.0 (7) C3—C4—C10—C15 147.3 (4)
C3—C4—C5—C6 9.7 (6) C5—C4—C10—C15 −29.1 (6)
C7—C1—C2—C3 −175.2 (4) C3—C4—C10—C11 −31.1 (6)
C7—C1—C6—C5 −178.2 (4) C5—C4—C10—C11 152.6 (4)
C2—C1—C6—C9 −179.2 (3) C15—C10—C11—C12 −0.4 (6)
C4—C5—C6—C9 −160.8 (4) C4—C10—C11—C12 178.0 (4)
C6—C1—C2—C8 −175.0 (3) C10—C11—C12—C13 0.4 (6)
C8—C2—C3—C4 147.4 (4) C11—C12—C13—C14 −0.3 (6)
C6—C1—C2—C3 −51.8 (4) C11—C12—C13—C16 −179.4 (4)
C7—C1—C2—C8 61.6 (4) C12—C13—C14—C15 0.2 (6)
C1—C2—C3—C4 23.4 (6) C16—C13—C14—C15 179.3 (4)
C2—C3—C4—C10 −178.2 (4) C13—C14—C15—C10 −0.3 (7)
C10—C4—C5—C6 −174.0 (4) C11—C10—C15—C14 0.4 (6)
C4—C5—C6—C1 −38.0 (5) C4—C10—C15—C14 −178.1 (4)
C2—C1—C6—C5 59.4 (4) C14—C13—C16—C17 1.5 (6)
C7—C1—C6—C9 −56.8 (5) C12—C13—C16—C17 −179.5 (4)
C2—C1—C7—O1 55.7 (6) C14—C13—C16—C19 −119.2 (4)
C6—C1—C7—O1 −67.3 (6) C12—C13—C16—C19 59.9 (5)
C2—C1—C7—O2 −124.9 (4) C14—C13—C16—C18 121.7 (4)
C6—C1—C7—O2 112.0 (4) C12—C13—C16—C18 −59.3 (5)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O2—H2···O1i 0.82 1.88 2.702 (4) 175

Symmetry codes: (i) −x+1, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: OM2210).

References

  1. Altomare, A., Cascarano, G., Giacovazzo, C., Guagliardi, A., Burla, M. C., Polidori, G. & Camalli, M. (1994). J. Appl. Cryst.27, 435.
  2. Bernstein, J., Davis, R., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl.34, 1555–1573.
  3. Bruker (2005). SADABS, SAINT and APEX2 Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Molecular Structure Corporation (1997). TEXSAN MSC, The Woodlands, Texas, USA.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Spek, A. L. (2003). J. Appl. Cryst.36, 7–13.
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  8. Xie, S., Kenny, C. & Robinson, P. D. (2007a). Acta Cryst. E63, o3897.
  9. Xie, S., Kenny, C. & Robinson, P. D. (2007b). Acta Cryst. E63, o1660–o1662.
  10. Xie, S., Meyers, C. Y. & Robinson, P. D. (2004). Acta Cryst. E60, o1362–o1364.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808003309/om2210sup1.cif

e-64-0o554-sup1.cif (18.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808003309/om2210Isup2.hkl

e-64-0o554-Isup2.hkl (143.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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