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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Feb 15;64(Pt 3):o598. doi: 10.1107/S1600536808003176

cis-4-(Tosyl­oxymeth­yl)cyclo­hexa­ne­carboxylic acid

De-Hong Jiang a, Zhi-Hua Mao b, Hu Zheng a,*
PMCID: PMC2960809  PMID: 21201936

Abstract

The title compound, C15H20O5S, is an inter­mediate in the synthesis of novel amino­carboxylic acid derivatives. The cyclo­hexane ring exhibits a chair conformation. In the crystal structure, adjacent mol­ecules form dimers via O—H⋯O hydrogen bonds.

Related literature

For the use of amino­carboxylic acid derivatives as anti-ulcer agents, see: Hoshina et al. (1984). For related structures, see: Qi et al. (2008); van Koningsveld et al. (1972).graphic file with name e-64-0o598-scheme1.jpg

Experimental

Crystal data

  • C15H20O5S

  • M r = 312.37

  • Monoclinic, Inline graphic

  • a = 12.545 (4) Å

  • b = 10.085 (3) Å

  • c = 12.654 (6) Å

  • β = 98.05 (3)°

  • V = 1585.1 (10) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.22 mm−1

  • T = 291 (2) K

  • 0.45 × 0.40 × 0.38 mm

Data collection

  • Enraf–Nonius CAD-4 diffractometer

  • Absorption correction: none

  • 4142 measured reflections

  • 2931 independent reflections

  • 1794 reflections with I > 2σ(I)

  • R int = 0.004

  • 3 standard reflections every 250 reflections intensity decay: 0.8%

Refinement

  • R[F 2 > 2σ(F 2)] = 0.044

  • wR(F 2) = 0.130

  • S = 1.03

  • 2931 reflections

  • 197 parameters

  • H-atom parameters constrained

  • Δρmax = 0.24 e Å−3

  • Δρmin = −0.26 e Å−3

Data collection: DIFRAC (Gabe et al., 1993); cell refinement: DIFRAC; data reduction: NRCVAX (Gabe et al., 1989); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808003176/zl2098sup1.cif

e-64-0o598-sup1.cif (16.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808003176/zl2098Isup2.hkl

e-64-0o598-Isup2.hkl (143.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O5—H5⋯O4i 0.82 1.83 2.642 (3) 173

Symmetry code: (i) Inline graphic.

supplementary crystallographic information

Comment

Some aminocarboxylic acid derivatives are used as anti-ulcer agents (Hoshina et al., 1984). To find new anti-ulcer agents, a series of trans/cis-cyclohexanecarboxylic acid derivatives were designed and synthesized.

In this paper, we want to report the synthesis and structure of the title compound, cis-4-(tosyloxymethyl)cyclohexanecarboxylic acid.

The cyclohexane ring exhibits a chair conformation and the cyclohexane C—C bond lengths and C—C—C endocyclic angles are in the range found for similar compounds (van Koningsveld, 1972) (Fig.1). They agree well with those of trans-4-(tosyloxymethyl)cyclohexanecarboxylic acid (Qi et al., 2008).

In the crystal structure, two molecules form centrosymmetric dimers via O—H···O hydrogen bonds (Fig. 2).

Experimental

cis-4-(Methoxycarboxyl)cyclohexanemethanol (10 mmol), pyridine (11 mmol) and a small amount of 4-dimethylaminopyridine were dissolved in dichloromethane (20 ml), then p-toluenesulfonyl chloride (11 mmol) was added dropwise with vigorous stirring at room temperature. After 8 h the reaction was quenched by addition of water and the organic layer separated was evaporated under vacuum, the solid obtained was hydrolyzed in a mixed solution of methanol and aqueous NaOH (11 mmol) for 4 h at 323 K. The title compound was then obtained by acidification with hydrochloric acid followed by recrystallization from ethyl acetate. Colorless crystals suitable for X-ray analysis were obtained by slow evaporation in ethyl acetate at room temperature.

Refinement

The H atoms were placed in the calculated positions in the riding model approximation with C—H = 0.93 (aromatic-H) and 0.96 (methyl-H), O—H = 0.82 Å (hydroxyl) and with Uiso(H) = 1.2Ueq(aromatic-C) and 1.5Ueq(methyl-C, hydroxyl). Methyl and hydroxyl H atoms were allowed to rotate around the C—C and C—O axis but not to tilt to best fit the experimental electron density.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level.

Fig. 2.

Fig. 2.

Packing diagram of the title compound.

Crystal data

C15H20O5S F000 = 664
Mr = 312.37 Dx = 1.309 Mg m3
Monoclinic, P21/c Mo Kα radiation λ = 0.71073 Å
a = 12.545 (4) Å Cell parameters from 43 reflections
b = 10.085 (3) Å θ = 4.4–7.3º
c = 12.654 (6) Å µ = 0.22 mm1
β = 98.05 (3)º T = 291 (2) K
V = 1585.1 (10) Å3 Block, colourless
Z = 4 0.45 × 0.40 × 0.38 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Rint = 0.004
Radiation source: fine-focus sealed tube θmax = 25.5º
Monochromator: graphite θmin = 1.6º
T = 291(2) K h = −15→15
ω/2θ scans k = 0→12
Absorption correction: none l = −6→15
4142 measured reflections 3 standard reflections
2931 independent reflections every 250 reflections
1794 reflections with I > 2σ(I) intensity decay: 0.8%

Refinement

Refinement on F2 Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: full H-atom parameters constrained
R[F2 > 2σ(F2)] = 0.044   w = 1/[σ2(Fo2) + (0.0689P)2 + 0.1341P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.130 (Δ/σ)max < 0.001
S = 1.03 Δρmax = 0.24 e Å3
2931 reflections Δρmin = −0.26 e Å3
197 parameters Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.0109 (15)
Secondary atom site location: difference Fourier map

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.88825 (5) 1.11227 (6) 0.13440 (6) 0.0571 (2)
O1 0.86629 (16) 1.13334 (18) 0.24047 (15) 0.0714 (6)
O2 0.92693 (13) 0.96607 (16) 0.12094 (14) 0.0587 (5)
O3 0.96662 (14) 1.19132 (18) 0.09296 (16) 0.0734 (6)
O4 0.61080 (15) 0.4878 (2) 0.08885 (17) 0.0756 (6)
O5 0.60020 (17) 0.5097 (3) −0.08567 (17) 0.0921 (7)
H5 0.5356 0.5095 −0.0812 0.138*
C1 0.6708 (2) 1.1419 (3) 0.0859 (2) 0.0655 (7)
H1 0.6689 1.1457 0.1591 0.079*
C2 0.5771 (2) 1.1563 (3) 0.0140 (3) 0.0768 (9)
H2 0.5122 1.1706 0.0399 0.092*
C3 0.5778 (2) 1.1499 (3) −0.0942 (3) 0.0718 (8)
C4 0.6745 (3) 1.1276 (3) −0.1305 (2) 0.0744 (8)
H4 0.6763 1.1214 −0.2035 0.089*
C5 0.7684 (2) 1.1143 (3) −0.0613 (2) 0.0673 (7)
H5A 0.8331 1.1002 −0.0876 0.081*
C6 0.7667 (2) 1.1218 (2) 0.0466 (2) 0.0517 (6)
C7 0.4746 (3) 1.1693 (4) −0.1705 (3) 0.1080 (12)
H7A 0.4173 1.1920 −0.1309 0.162*
H7B 0.4569 1.0887 −0.2094 0.162*
H7C 0.4843 1.2394 −0.2196 0.162*
C8 0.8744 (2) 0.8621 (2) 0.1757 (2) 0.0574 (7)
H8A 0.8005 0.8870 0.1802 0.069*
H8B 0.9116 0.8509 0.2477 0.069*
C9 0.87667 (18) 0.7337 (2) 0.11476 (18) 0.0475 (6)
H9 0.9516 0.7140 0.1065 0.057*
C10 0.8351 (2) 0.6228 (2) 0.1803 (2) 0.0537 (6)
H10A 0.8800 0.6170 0.2490 0.064*
H10B 0.7623 0.6434 0.1926 0.064*
C11 0.8356 (2) 0.4903 (2) 0.1233 (2) 0.0628 (7)
H11A 0.9095 0.4643 0.1201 0.075*
H11B 0.8036 0.4237 0.1644 0.075*
C12 0.7748 (2) 0.4936 (3) 0.0110 (2) 0.0618 (7)
H12 0.7914 0.4111 −0.0242 0.074*
C13 0.8138 (2) 0.6083 (3) −0.0531 (2) 0.0620 (7)
H13A 0.8869 0.5905 −0.0659 0.074*
H13B 0.7687 0.6138 −0.1218 0.074*
C14 0.81088 (19) 0.7401 (2) 0.00422 (18) 0.0509 (6)
H14A 0.7369 0.7627 0.0108 0.061*
H14B 0.8396 0.8090 −0.0373 0.061*
C15 0.6550 (2) 0.4981 (2) 0.0095 (2) 0.0608 (7)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.0529 (4) 0.0520 (4) 0.0648 (5) −0.0071 (3) 0.0025 (3) −0.0085 (3)
O1 0.0762 (13) 0.0768 (13) 0.0589 (12) −0.0026 (10) 0.0017 (10) −0.0190 (9)
O2 0.0526 (10) 0.0551 (10) 0.0697 (12) −0.0066 (8) 0.0133 (9) −0.0022 (8)
O3 0.0561 (12) 0.0641 (11) 0.0990 (15) −0.0186 (9) 0.0074 (10) 0.0001 (10)
O4 0.0562 (12) 0.1058 (16) 0.0645 (13) −0.0209 (10) 0.0070 (10) −0.0001 (11)
O5 0.0640 (13) 0.139 (2) 0.0713 (14) −0.0219 (14) 0.0036 (11) 0.0193 (13)
C1 0.0573 (17) 0.0739 (18) 0.0659 (18) −0.0063 (14) 0.0111 (15) −0.0126 (14)
C2 0.0484 (17) 0.091 (2) 0.091 (2) −0.0003 (15) 0.0110 (16) −0.0210 (18)
C3 0.0640 (19) 0.0699 (18) 0.077 (2) −0.0004 (14) −0.0058 (17) −0.0145 (15)
C4 0.076 (2) 0.089 (2) 0.0558 (18) 0.0038 (17) 0.0018 (16) −0.0006 (15)
C5 0.0593 (17) 0.0799 (19) 0.0640 (19) 0.0029 (14) 0.0128 (15) −0.0006 (14)
C6 0.0525 (15) 0.0462 (13) 0.0558 (15) −0.0047 (11) 0.0055 (12) −0.0056 (11)
C7 0.077 (2) 0.130 (3) 0.106 (3) 0.012 (2) −0.025 (2) −0.018 (2)
C8 0.0589 (16) 0.0625 (16) 0.0506 (15) −0.0092 (12) 0.0071 (13) 0.0009 (12)
C9 0.0410 (13) 0.0525 (13) 0.0482 (14) −0.0033 (11) 0.0035 (11) 0.0020 (11)
C10 0.0464 (14) 0.0613 (15) 0.0517 (14) −0.0021 (12) 0.0010 (11) 0.0106 (12)
C11 0.0499 (15) 0.0558 (15) 0.082 (2) 0.0018 (12) 0.0072 (14) 0.0111 (13)
C12 0.0616 (17) 0.0529 (14) 0.0721 (19) −0.0055 (12) 0.0138 (14) −0.0088 (12)
C13 0.0559 (15) 0.0810 (18) 0.0511 (15) −0.0119 (14) 0.0144 (13) −0.0095 (14)
C14 0.0487 (14) 0.0576 (14) 0.0466 (14) −0.0070 (11) 0.0070 (11) 0.0062 (11)
C15 0.0596 (17) 0.0564 (15) 0.0647 (19) −0.0165 (13) 0.0023 (15) 0.0002 (13)

Geometric parameters (Å, °)

S1—O3 1.4218 (18) C7—H7C 0.9600
S1—O1 1.423 (2) C8—C9 1.510 (3)
S1—O2 1.5688 (18) C8—H8A 0.9700
S1—C6 1.759 (3) C8—H8B 0.9700
O2—C8 1.464 (3) C9—C14 1.523 (3)
O4—C15 1.217 (3) C9—C10 1.526 (3)
O5—C15 1.306 (3) C9—H9 0.9800
O5—H5 0.8200 C10—C11 1.519 (3)
C1—C6 1.380 (4) C10—H10A 0.9700
C1—C2 1.390 (4) C10—H10B 0.9700
C1—H1 0.9300 C11—C12 1.516 (4)
C2—C3 1.372 (4) C11—H11A 0.9700
C2—H2 0.9300 C11—H11B 0.9700
C3—C4 1.374 (4) C12—C15 1.501 (4)
C3—C7 1.515 (4) C12—C13 1.532 (4)
C4—C5 1.372 (4) C12—H12 0.9800
C4—H4 0.9300 C13—C14 1.517 (3)
C5—C6 1.371 (4) C13—H13A 0.9700
C5—H5A 0.9300 C13—H13B 0.9700
C7—H7A 0.9600 C14—H14A 0.9700
C7—H7B 0.9600 C14—H14B 0.9700
O3—S1—O1 119.95 (12) C8—C9—C10 108.55 (19)
O3—S1—O2 104.28 (11) C14—C9—C10 110.34 (18)
O1—S1—O2 110.26 (11) C8—C9—H9 108.4
O3—S1—C6 108.65 (12) C14—C9—H9 108.4
O1—S1—C6 108.78 (13) C10—C9—H9 108.4
O2—S1—C6 103.69 (10) C11—C10—C9 111.2 (2)
C8—O2—S1 117.09 (15) C11—C10—H10A 109.4
C15—O5—H5 109.5 C9—C10—H10A 109.4
C6—C1—C2 118.7 (3) C11—C10—H10B 109.4
C6—C1—H1 120.7 C9—C10—H10B 109.4
C2—C1—H1 120.7 H10A—C10—H10B 108.0
C3—C2—C1 121.7 (3) C12—C11—C10 113.0 (2)
C3—C2—H2 119.2 C12—C11—H11A 109.0
C1—C2—H2 119.2 C10—C11—H11A 109.0
C2—C3—C4 118.1 (3) C12—C11—H11B 109.0
C2—C3—C7 120.3 (3) C10—C11—H11B 109.0
C4—C3—C7 121.6 (3) H11A—C11—H11B 107.8
C5—C4—C3 121.5 (3) C15—C12—C11 112.6 (2)
C5—C4—H4 119.3 C15—C12—C13 111.4 (2)
C3—C4—H4 119.3 C11—C12—C13 110.9 (2)
C6—C5—C4 119.9 (3) C15—C12—H12 107.2
C6—C5—H5A 120.1 C11—C12—H12 107.2
C4—C5—H5A 120.1 C13—C12—H12 107.2
C5—C6—C1 120.2 (3) C14—C13—C12 112.2 (2)
C5—C6—S1 119.5 (2) C14—C13—H13A 109.2
C1—C6—S1 120.2 (2) C12—C13—H13A 109.2
C3—C7—H7A 109.5 C14—C13—H13B 109.2
C3—C7—H7B 109.5 C12—C13—H13B 109.2
H7A—C7—H7B 109.5 H13A—C13—H13B 107.9
C3—C7—H7C 109.5 C13—C14—C9 110.81 (19)
H7A—C7—H7C 109.5 C13—C14—H14A 109.5
H7B—C7—H7C 109.5 C9—C14—H14A 109.5
O2—C8—C9 109.29 (19) C13—C14—H14B 109.5
O2—C8—H8A 109.8 C9—C14—H14B 109.5
C9—C8—H8A 109.8 H14A—C14—H14B 108.1
O2—C8—H8B 109.8 O4—C15—O5 121.8 (3)
C9—C8—H8B 109.8 O4—C15—C12 123.9 (3)
H8A—C8—H8B 108.3 O5—C15—C12 114.3 (3)
C8—C9—C14 112.73 (19)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O5—H5···O4i 0.82 1.83 2.642 (3) 173

Symmetry codes: (i) −x+1, −y+1, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZL2098).

References

  1. Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
  2. Gabe, E. J., Le Page, Y., Charland, J.-P., Lee, F. L. & White, P. S. (1989). J. Appl. Cryst.22, 384–387.
  3. Gabe, E. J., White, P. S. & Enright, G. D. (1993). DIFRAC. American Crystallographic Association, Pittsburgh Meeting, Abstract PA 104.
  4. Hoshina, K., Yamazaki, Y., Takeshita, T. & Naruchi, T. (1984). IUPHAP 9th International Congress of Pharmacology, p. 697. London.
  5. Koningsveld, H. van (1972). Acta Cryst. B28, 1189–1195.
  6. Qi, Q.-R., Huang, W.-C. & Zheng, H. (2008). Acta Cryst. E64, o405. [DOI] [PMC free article] [PubMed]
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808003176/zl2098sup1.cif

e-64-0o598-sup1.cif (16.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808003176/zl2098Isup2.hkl

e-64-0o598-Isup2.hkl (143.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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