catena-Poly[[nickel(II)-μ-1,3-dimethyl-2,6-dioxo-7H-purinato-κ² N ⁷:N ⁹] hydroxide]

Abstract

The title complex, {[Ni(C₇H₇N₄O₂)]OH}_n, has been prepared through hydro­thermal synthesis. The asymmetric unit contains one [Ni(TH)]⁺ cation (TH is the theophylline anion) and one hydroxide anion. The Ni²⁺ ion is coordinated by two N atoms from two neighboring theophylline anions. The alternating linkage of the Ni²⁺ cation and theophylline anion results in a one-dimensional chain along the [010] direction. Intermolec­ular O—H⋯O hydrogen bonds are present n the crystal structure.

Related literature

For related literature, see: Horikoshi & Mochida (2006 ▶); Robin & Fromm (2003 ▶).

Experimental

Crystal data

• [Ni(C₇H₇N₄O₂)]OH

• M _r = 254.88

• Monoclinic,

• a = 11.399 (3) Å

• b = 11.533 (2) Å

• c = 6.9807 (15) Å

• β = 101.993 (3)°

• V = 897.7 (3) ų

• Z = 4

• Mo Kα radiation

• μ = 2.15 mm⁻¹

• T = 298 (2) K

• 0.48 × 0.24 × 0.08 mm

Data collection

• Bruker SMART APEX CCD area-detector diffractometer

• Absorption correction: multi-scan (SADABS; Sheldrick, 2001 ▶) T _min = 0.425, T _max = 0.847

• 4701 measured reflections

• 1753 independent reflections

• 1592 reflections with I > 2σ(I)

• R _int = 0.024

Refinement

• R[F ² > 2σ(F ²)] = 0.028

• wR(F ²) = 0.078

• S = 1.07

• 1753 reflections

• 142 parameters

• 7 restraints

• H atoms treated by a mixture of independent and constrained refinement

• Δρ_max = 0.36 e Å⁻³

• Δρ_min = −0.43 e Å⁻³

Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: PLATON.

Supplementary Material

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A	D—H	H⋯A	D⋯A	D—H⋯A
O3—H3⋯O1i	0.832 (11)	2.023 (12)	2.851 (3)	173 (5)

Symmetry code: (i) .

supplementary crystallographic information

Comment

The rational design, synthesis and characterization of coordination polymers construct from transition metal ions, especially the first-row transition metal, and various organic ligands linked with covalent bonds have still been actively researched as one of highly topical research areas aiming to obtain fascinating structures as well as special properties such as magnetism, catalysis, molecular recognition, ion exchange, nonlinear optical behavior and electrical conductivity (Robin & Fromm, 2003; Horikoshi & Mochida, 2006). Herein we present a one-dimensional,linear transition metal complexes, namely {[Ni(TH)]OH}_n(TH = theophylline anion), (I).

Each asymmetry unit of the title compound (I) consists of one [Ni(TH)]⁺ cation and one isolated hydroxyl anion (Fig.1). Ni²⁺ adopts a two-coordinate coordination mode and coordinated by two nitrogen atoms from two neighboring theophylline anions with average Ni—N length 1.861° and N—Ni—N angle 177.25° (Table 1), respectively. The short Ni—N distances in the compound are caused by the low coordination numbers and highly positive charges. The alternate linkers of Ni²⁺ ion and theophylline anion within which two adjacent anions are in the trans-position finally give rise to a one-dimensional chain (Fig.2). To best of our knowledge, the title complex is firstly reported. We found 3,5-dinitrobenzoic acid takes an key role in controlling the formation of the title compound. If 3,5-Ddinitrobenzoic acid was not added into the reaction system, the compound can't be obtained. Moreover, we also found basic medium NaOH must be added into the reaction system. Otherwise these compounds can't be prepared. We think that 3,5-dinitrobenzoic acid here acts as a reaction template. Additionally, the effect of the basic medium (NaOH) made NH group of theophylline deprotonate leading to the formation of a monoanionic bidentate ligand.

Experimental

A mixture of NiCl₂.6H₂O (0.50 mmol, 0.12 g), 3,5-dinitrobenzoic acid (0.50 mmol, 0.110 g), theophylline monohydrate (0.50 mmol, 0.09 g), NaOH (0.5 mmol, 0.02 g) and H₂O (20 ml) in the mole ratio 1:1:1:1:2 were heated in a Teflon-lined steel autoclave inside a programmable electric furnace at 1433 K for 72 h. After cooling the autoclave to room temperature for 36 h, brown crystals suitable for single-crystal X-ray diffraction were obtained.

Refinement

H atoms bonded to O atom were located from the difference maps and refined with distance restraints O—H = 0.82 (1) Å. All the remaining H atoms were positioned geometrically, with C—H = 0.93–0.96 Å, and refined as riding, with U_iso(H) = 1.2U_eq(aromatic C) or 1.5U_eq(methyl C).

Figures

Fig. 1.

Asymmetry structural unit of (I). Displacement ellipsoids for non-H atoms are drawn at the 30% probability level.

Fig. 2.

One-dimensional chain structure of the cations {[Ni(TH)]+}n. Hydrogen atoms are omitted for clarity.

Crystal data

[Ni(C7H7N4O2)]OH	F000 = 520
Mr = 254.88	Dx = 1.886 Mg m−3
Monoclinic, P21/c	Mo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybc	Cell parameters from 1720 reflections
a = 11.399 (3) Å	θ = 2.2–28.0º
b = 11.533 (2) Å	µ = 2.15 mm−1
c = 6.9807 (15) Å	T = 298 (2) K
β = 101.993 (3)º	Block, brown
V = 897.7 (3) Å3	0.48 × 0.24 × 0.08 mm
Z = 4

Data collection

Bruker SMART APEX CCD area-detector diffractometer	1753 independent reflections
Radiation source: fine-focus sealed tube	1592 reflections with I > 2σ(I)
Monochromator: graphite	Rint = 0.024
T = 298(2) K	θmax = 26.0º
ω scans	θmin = 1.8º
Absorption correction: multi-scan(SADABS; Sheldrick, 2001)	h = −14→5
Tmin = 0.425, Tmax = 0.847	k = −13→14
4701 measured reflections	l = −8→8

Refinement

Refinement on F2	Secondary atom site location: difference Fourier map
Least-squares matrix: full	Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.028	H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.078	w = 1/[σ2(Fo2) + (0.048P)2 + 0.1385P] where P = (Fo2 + 2Fc2)/3
S = 1.07	(Δ/σ)max = 0.001
1753 reflections	Δρmax = 0.36 e Å−3
142 parameters	Δρmin = −0.43 e Å−3
7 restraints	Extinction correction: none
Primary atom site location: structure-invariant direct methods

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Ų)

	x	y	z	Uiso*/Ueq
Ni1	0.48633 (3)	0.53369 (2)	0.24668 (4)	0.03643 (14)
O1	0.2600 (2)	0.03105 (12)	0.0185 (3)	0.0546 (5)
O2	0.04285 (16)	0.36076 (15)	−0.1653 (3)	0.0568 (4)
O3	0.2120 (4)	0.7950 (3)	0.9081 (7)	0.1392 (14)
H3	0.227 (5)	0.8648 (16)	0.931 (7)	0.135 (6)*
N1	0.44301 (17)	0.37995 (14)	0.1875 (3)	0.0365 (4)
N2	0.46418 (17)	0.18588 (15)	0.1998 (3)	0.0367 (4)
N3	0.15129 (17)	0.19704 (15)	−0.0707 (3)	0.0399 (4)
N4	0.23455 (17)	0.38436 (14)	0.0017 (2)	0.0381 (4)
C1	0.51491 (19)	0.28771 (17)	0.2480 (3)	0.0368 (5)
H1	0.5935	0.2955	0.3177	0.044*
C2	0.35017 (19)	0.21287 (15)	0.0998 (3)	0.0329 (4)
C3	0.2555 (2)	0.13741 (16)	0.0164 (3)	0.0377 (5)
C4	0.1381 (2)	0.31716 (19)	−0.0830 (3)	0.0393 (5)
C5	0.33876 (18)	0.33133 (15)	0.0931 (3)	0.0318 (4)
C6	0.0440 (2)	0.1291 (2)	−0.1542 (4)	0.0554 (6)
H6A	−0.0174	0.1442	−0.0819	0.083*
H6B	0.0635	0.0481	−0.1466	0.083*
H6C	0.0157	0.1507	−0.2887	0.083*
C7	0.2229 (3)	0.5112 (2)	−0.0110 (4)	0.0520 (6)
H7A	0.2696	0.5456	0.1054	0.078*
H7B	0.1402	0.5323	−0.0236	0.078*
H7C	0.2513	0.5384	−0.1232	0.078*

Atomic displacement parameters (Ų)

	U11	U22	U33	U12	U13	U23
Ni1	0.0411 (2)	0.01831 (18)	0.0477 (2)	−0.00491 (9)	0.00408 (13)	−0.00290 (8)
O1	0.0644 (13)	0.0267 (8)	0.0696 (11)	−0.0096 (7)	0.0068 (10)	−0.0035 (6)
O2	0.0416 (9)	0.0613 (11)	0.0608 (10)	0.0094 (8)	−0.0050 (8)	0.0053 (8)
O3	0.118 (3)	0.0735 (17)	0.203 (4)	−0.0072 (19)	−0.019 (3)	0.001 (2)
N1	0.0405 (10)	0.0246 (7)	0.0428 (9)	−0.0015 (7)	0.0052 (8)	−0.0014 (7)
N2	0.0397 (10)	0.0244 (8)	0.0437 (9)	0.0021 (7)	0.0036 (8)	0.0010 (7)
N3	0.0380 (10)	0.0387 (9)	0.0406 (9)	−0.0066 (8)	0.0027 (8)	−0.0010 (7)
N4	0.0413 (10)	0.0291 (8)	0.0419 (9)	0.0054 (7)	0.0040 (8)	0.0035 (7)
C1	0.0370 (12)	0.0269 (12)	0.0438 (12)	0.0005 (8)	0.0022 (10)	0.0003 (7)
C2	0.0375 (11)	0.0240 (9)	0.0363 (10)	−0.0006 (8)	0.0055 (8)	−0.0002 (7)
C3	0.0473 (13)	0.0286 (10)	0.0381 (10)	−0.0049 (8)	0.0107 (9)	−0.0007 (7)
C4	0.0409 (12)	0.0409 (11)	0.0358 (10)	0.0024 (9)	0.0067 (9)	0.0003 (9)
C5	0.0383 (11)	0.0230 (8)	0.0339 (9)	0.0022 (8)	0.0072 (8)	0.0006 (7)
C6	0.0480 (14)	0.0587 (15)	0.0562 (14)	−0.0190 (12)	0.0033 (12)	−0.0054 (11)
C7	0.0574 (16)	0.0295 (10)	0.0639 (15)	0.0110 (11)	0.0008 (12)	0.0038 (10)

Geometric parameters (Å, °)

Ni1—N2i	1.8577 (17)	N4—C5	1.370 (3)
Ni1—N1	1.8636 (17)	N4—C4	1.374 (3)
O1—C3	1.228 (2)	N4—C7	1.469 (3)
O2—C4	1.226 (3)	C1—H1	0.9300
O3—H3	0.832 (11)	C2—C5	1.372 (3)
N1—C5	1.355 (3)	C2—C3	1.414 (3)
N1—C1	1.356 (3)	C6—H6A	0.9600
N2—C1	1.321 (3)	C6—H6B	0.9600
N2—C2	1.377 (3)	C6—H6C	0.9600
N2—Ni1ii	1.8577 (17)	C7—H7A	0.9600
N3—C4	1.394 (3)	C7—H7B	0.9600
N3—C3	1.398 (3)	C7—H7C	0.9600
N3—C6	1.467 (3)
N2i—Ni1—N1	177.25 (8)	O1—C3—C2	125.7 (2)
C5—N1—C1	103.84 (16)	N3—C3—C2	112.53 (17)
C5—N1—Ni1	131.82 (14)	O2—C4—N4	121.4 (2)
C1—N1—Ni1	124.22 (14)	O2—C4—N3	120.7 (2)
C1—N2—C2	104.20 (15)	N4—C4—N3	117.9 (2)
C1—N2—Ni1ii	133.63 (15)	N1—C5—N4	129.03 (17)
C2—N2—Ni1ii	122.05 (14)	N1—C5—C2	109.16 (18)
C4—N3—C3	125.93 (19)	N4—C5—C2	121.81 (19)
C4—N3—C6	115.8 (2)	N3—C6—H6A	109.5
C3—N3—C6	118.24 (19)	N3—C6—H6B	109.5
C5—N4—C4	119.16 (17)	H6A—C6—H6B	109.5
C5—N4—C7	122.08 (19)	N3—C6—H6C	109.5
C4—N4—C7	118.75 (19)	H6A—C6—H6C	109.5
N2—C1—N1	114.44 (18)	H6B—C6—H6C	109.5
N2—C1—H1	122.8	N4—C7—H7A	109.5
N1—C1—H1	122.8	N4—C7—H7B	109.5
C5—C2—N2	108.36 (18)	H7A—C7—H7B	109.5
C5—C2—C3	122.7 (2)	N4—C7—H7C	109.5
N2—C2—C3	128.95 (17)	H7A—C7—H7C	109.5
O1—C3—N3	121.7 (2)	H7B—C7—H7C	109.5

Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) −x+1, y−1/2, −z+1/2.

Hydrogen-bond geometry (Å, °)

D—H···A	D—H	H···A	D···A	D—H···A
O3—H3···O1iii	0.832 (11)	2.023 (12)	2.851 (3)	173 (5)

Symmetry codes: (iii) x, y+1, z+1.