Abstract
In the molecule of the title compound, C15H11NO4, the essentially planar phthalide group is oriented at a dihedral angle of 56.78 (5)° with respect to the substituted aromatic ring. An intramolecular N—H⋯O hydrogen bond results in the formation of a non-planar six-membered ring, which adopts a nearly flattened-boat conformation. In the crystal structure, intermolecular C—H⋯O, O—H⋯O and N—H⋯O hydrogen bonds link the molecules, generating centrosymmetric R 2 2(8) and R 2 2(11) ring motifs and forming a three-dimensional network.
Related literature
For general background, see: Aoki et al. (1973 ▶, 1974 ▶); Lacova (1973 ▶, 1974 ▶); Elderfield (1951 ▶); Bellasio (1974 ▶, 1975 ▶); Roy & Sarkar (2005 ▶); Kubota & Tatsuno (1971 ▶); Tsi & Tan (1997 ▶). For related structures, see: Büyükgüngör & Odabaşoğlu (2006 ▶); Odabaşoğlu & Büyükgüngör (2006 ▶; 2007 ▶). For ring puckering parameters, see: Cremer & Pople (1975 ▶). For ring motif details, see: Bernstein et al. (1995 ▶); Etter (1990 ▶).
Experimental
Crystal data
C15H11NO4
M r = 269.25
Monoclinic,
a = 7.8135 (6) Å
b = 22.6205 (10) Å
c = 7.0902 (5) Å
β = 101.061 (5)°
V = 1229.88 (14) Å3
Z = 4
Mo Kα radiation
μ = 0.11 mm−1
T = 296 K
0.55 × 0.36 × 0.18 mm
Data collection
Stoe IPDS II diffractometer
Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.958, T max = 0.982
12715 measured reflections
2536 independent reflections
1958 reflections with I > 2σ(I)
R int = 0.034
Refinement
R[F 2 > 2σ(F 2)] = 0.043
wR(F 2) = 0.093
S = 1.07
2536 reflections
225 parameters
All H-atom parameters refined
Δρmax = 0.16 e Å−3
Δρmin = −0.17 e Å−3
Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680800754X/hk2434sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S160053680800754X/hk2434Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1⋯O3 | 0.86 (2) | 2.074 (19) | 2.7004 (18) | 129.3 (16) |
| N1—H1⋯O1i | 0.86 (2) | 2.58 (2) | 3.281 (2) | 138.9 (15) |
| O4—H4A⋯O3ii | 0.97 (3) | 1.67 (3) | 2.6329 (17) | 174 (2) |
| C4—H4⋯O2iii | 0.93 (2) | 2.58 (2) | 3.464 (2) | 158.9 (17) |
| C8—H8⋯O1iv | 0.983 (18) | 2.580 (17) | 3.403 (2) | 141.4 (12) |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
.
Acknowledgments
The authors acknowledge the Faculty of Arts and Sciences, Ondokuz Mayıs University, Turkey, for the use of the Stoe IPDS II diffractometer (purchased under grant F.279 of the University Research Fund).
supplementary crystallographic information
Comment
Phthalides are known to show diverse biological activities as hormones, pheromones and antibiotics (Aoki et al., 1973, 1974; Lacova, 1973, 1974; Elderfield, 1951; Bellasio, 1974, 1975; Roy & Sarkar, 2005; Kubota & Tatsuno, 1971; Tsi & Tan, 1997). As part of our ongoing research on 3-substituted phthalides (Büyükgüngör & Odabaşoğlu, 2006; Odabaşoğlu & Büyükgüngör, 2006; 2007), the title compound, (I), has been synthesized and its crystal structure is reported here.
In the molecule of (I), (Fig. 1), rings A (C2-C7), B (C1/C2/C7/C8/O2) and C (C9-C14) are, of course, planar. The dihedral angles between them are A/B = 3.08 (3)°, A/C = 57.11 (4)° and B/C = 56.56 (5)°. So, rings A and B are also nearly coplanar. Ring C is oriented with respect to the coplanar ring system at a dihedral angle of 56.78 (5)°. The intramolecular N-H···O hydrogen bond (Table 1) results in the formation of a non-planar six-membered ring D (N1/H1/O3/C9/C10/C15), having total puckering amplitude, QT, of 1.408 (3) Å, in which it adopts a nearly flattened-boat [φ = -42.43 (2)° and θ = 97.94 (3)°] conformation (Cremer & Pople, 1975).
In the crystal structure, intermolecular C-H···O, O-H···O and N-H···O hydrogen bonds (Table 1) link the molecules, generating centrosymmetric R22(8) and R22(11) (Fig. 2) ring motifs (Bernstein et al., 1995; Etter, 1990), to form a three-dimensional network, in which they may be effective in the stabilization of the structure.
Experimental
The title compound was prepared according to the method described by Odabaşoğlu & Büyükgüngör (2006), using phthalaldehydic acid and antranilic acid as starting materials (yield; 70%). Crystals of (I) suitable for X-ray analysis were obtained by slow evaporation of an ethanol-DMF (1:1) solution at room temperature.
Refinement
H atoms were located in difference synthesis and refined freely [C-H = 0.93 (2)-0.983 (18) Å and Uiso(H) = 0.036 (4)-0.060 (6) Å2; N-H = 0.86 (2) Å and Uiso(H) = 0.046 (5) Å2; O-H = 0.97 (3) Å and Uiso(H) = 0.094 (9) Å2].
Figures
Fig. 1.
The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. Hydrogen bond is shown as dashed line.
Fig. 2.
A partial packing diagram of (I), showing the formation of R22(8) and R22(11) ring motifs. Hydrogen bonds are shown as dashed lines [symmetry codes: (i) x, 1/2 - y, z - 1/2; (ii) 1 - x, -y, 2 - z]. H atoms not involved in hydrogen bondings have been omitted for clarity.
Crystal data
| C15H11NO4 | F000 = 560 |
| Mr = 269.25 | Dx = 1.454 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 12715 reflections |
| a = 7.8135 (6) Å | θ = 1.8–27.3º |
| b = 22.6205 (10) Å | µ = 0.11 mm−1 |
| c = 7.0902 (5) Å | T = 296 K |
| β = 101.061 (5)º | Prism, colorless |
| V = 1229.88 (14) Å3 | 0.55 × 0.36 × 0.18 mm |
| Z = 4 |
Data collection
| Stoe IPDSII diffractometer | 2536 independent reflections |
| Monochromator: plane graphite | 1958 reflections with I > 2σ(I) |
| Detector resolution: 6.67 pixels mm-1 | Rint = 0.034 |
| T = 296 K | θmax = 26.5º |
| ω scan rotation method | θmin = 1.8º |
| Absorption correction: integration(X-RED32; Stoe & Cie, 2002) | h = −9→9 |
| Tmin = 0.958, Tmax = 0.982 | k = −28→28 |
| 12715 measured reflections | l = −8→8 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.043 | All H-atom parameters refined |
| wR(F2) = 0.093 | w = 1/[σ2(Fo2) + (0.0403P)2 + 0.2251P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.07 | (Δ/σ)max < 0.001 |
| 2536 reflections | Δρmax = 0.16 e Å−3 |
| 225 parameters | Δρmin = −0.17 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.6576 (2) | 0.26649 (7) | 0.4899 (2) | 0.0402 (4) | |
| C2 | 0.8303 (2) | 0.24430 (7) | 0.5812 (2) | 0.0367 (4) | |
| C3 | 0.9781 (3) | 0.27532 (8) | 0.6650 (3) | 0.0457 (4) | |
| C4 | 1.1272 (3) | 0.24364 (9) | 0.7337 (3) | 0.0518 (5) | |
| C5 | 1.1279 (3) | 0.18248 (9) | 0.7191 (3) | 0.0511 (5) | |
| C6 | 0.9805 (2) | 0.15141 (8) | 0.6356 (3) | 0.0460 (4) | |
| C7 | 0.8308 (2) | 0.18333 (7) | 0.5662 (2) | 0.0354 (4) | |
| C8 | 0.6571 (2) | 0.16362 (7) | 0.4548 (3) | 0.0364 (4) | |
| C9 | 0.4218 (2) | 0.09230 (6) | 0.4534 (2) | 0.0332 (4) | |
| C10 | 0.3436 (2) | 0.04653 (6) | 0.5436 (2) | 0.0321 (3) | |
| C11 | 0.1982 (2) | 0.01723 (7) | 0.4399 (3) | 0.0396 (4) | |
| C12 | 0.1264 (2) | 0.03208 (8) | 0.2541 (3) | 0.0458 (4) | |
| C13 | 0.2021 (2) | 0.07689 (8) | 0.1666 (3) | 0.0435 (4) | |
| C14 | 0.3465 (2) | 0.10673 (7) | 0.2628 (2) | 0.0389 (4) | |
| C15 | 0.4117 (2) | 0.02788 (6) | 0.7427 (2) | 0.0334 (3) | |
| N1 | 0.56924 (19) | 0.12145 (6) | 0.5475 (2) | 0.0387 (3) | |
| O1 | 0.60404 (19) | 0.31643 (5) | 0.4713 (2) | 0.0563 (4) | |
| O2 | 0.55684 (15) | 0.21973 (5) | 0.41990 (18) | 0.0437 (3) | |
| O3 | 0.53512 (17) | 0.05196 (5) | 0.84778 (17) | 0.0457 (3) | |
| O4 | 0.32808 (17) | −0.01696 (5) | 0.80153 (19) | 0.0481 (3) | |
| H1 | 0.596 (2) | 0.1184 (8) | 0.670 (3) | 0.046 (5)* | |
| H3 | 0.975 (3) | 0.3188 (9) | 0.671 (3) | 0.058 (6)* | |
| H4 | 1.229 (3) | 0.2630 (9) | 0.792 (3) | 0.060 (6)* | |
| H4A | 0.383 (3) | −0.0277 (11) | 0.931 (4) | 0.094 (9)* | |
| H5 | 1.233 (3) | 0.1623 (8) | 0.764 (3) | 0.055 (6)* | |
| H6 | 0.980 (3) | 0.1090 (9) | 0.626 (3) | 0.053 (5)* | |
| H8 | 0.665 (2) | 0.1498 (7) | 0.325 (3) | 0.036 (4)* | |
| H11 | 0.149 (2) | −0.0136 (8) | 0.506 (3) | 0.045 (5)* | |
| H12 | 0.030 (3) | 0.0113 (9) | 0.191 (3) | 0.055 (6)* | |
| H13 | 0.154 (2) | 0.0893 (8) | 0.035 (3) | 0.049 (5)* | |
| H14 | 0.394 (2) | 0.1377 (8) | 0.199 (3) | 0.047 (5)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0518 (10) | 0.0365 (8) | 0.0337 (9) | −0.0007 (7) | 0.0115 (8) | 0.0015 (6) |
| C2 | 0.0436 (9) | 0.0365 (8) | 0.0316 (8) | −0.0055 (7) | 0.0113 (7) | −0.0002 (6) |
| C3 | 0.0524 (11) | 0.0441 (10) | 0.0421 (10) | −0.0141 (8) | 0.0130 (8) | −0.0057 (8) |
| C4 | 0.0421 (11) | 0.0669 (12) | 0.0456 (11) | −0.0212 (10) | 0.0068 (9) | −0.0065 (9) |
| C5 | 0.0371 (10) | 0.0647 (12) | 0.0497 (11) | 0.0009 (9) | 0.0041 (9) | 0.0057 (9) |
| C6 | 0.0433 (10) | 0.0409 (9) | 0.0520 (11) | 0.0000 (8) | 0.0040 (8) | 0.0030 (8) |
| C7 | 0.0375 (9) | 0.0359 (8) | 0.0333 (9) | −0.0051 (7) | 0.0080 (7) | 0.0024 (6) |
| C8 | 0.0389 (9) | 0.0318 (8) | 0.0373 (9) | −0.0013 (7) | 0.0040 (7) | 0.0031 (6) |
| C9 | 0.0321 (8) | 0.0308 (7) | 0.0361 (9) | 0.0020 (6) | 0.0044 (7) | −0.0020 (6) |
| C10 | 0.0298 (8) | 0.0316 (7) | 0.0351 (9) | 0.0028 (6) | 0.0066 (7) | 0.0001 (6) |
| C11 | 0.0329 (9) | 0.0422 (9) | 0.0429 (10) | −0.0047 (7) | 0.0054 (7) | −0.0011 (7) |
| C12 | 0.0366 (10) | 0.0522 (10) | 0.0448 (11) | −0.0082 (8) | −0.0017 (8) | −0.0046 (8) |
| C13 | 0.0426 (10) | 0.0487 (10) | 0.0351 (10) | 0.0033 (8) | −0.0025 (8) | 0.0010 (7) |
| C14 | 0.0400 (10) | 0.0378 (8) | 0.0375 (9) | −0.0014 (7) | 0.0041 (7) | 0.0041 (7) |
| C15 | 0.0316 (8) | 0.0309 (7) | 0.0385 (9) | −0.0003 (6) | 0.0089 (7) | −0.0008 (6) |
| N1 | 0.0415 (8) | 0.0396 (7) | 0.0325 (8) | −0.0098 (6) | 0.0010 (6) | 0.0048 (6) |
| O1 | 0.0735 (10) | 0.0368 (6) | 0.0577 (9) | 0.0114 (6) | 0.0107 (7) | 0.0040 (6) |
| O2 | 0.0425 (7) | 0.0373 (6) | 0.0479 (7) | 0.0009 (5) | −0.0001 (6) | 0.0049 (5) |
| O3 | 0.0525 (8) | 0.0435 (6) | 0.0369 (7) | −0.0141 (6) | −0.0020 (6) | 0.0051 (5) |
| O4 | 0.0461 (7) | 0.0540 (7) | 0.0419 (7) | −0.0159 (6) | 0.0028 (6) | 0.0113 (6) |
Geometric parameters (Å, °)
| O4—H4A | 0.97 (3) | C8—O2 | 1.4872 (18) |
| N1—H1 | 0.86 (2) | C8—H8 | 0.983 (18) |
| C1—O1 | 1.203 (2) | C9—N1 | 1.383 (2) |
| C1—O2 | 1.355 (2) | C9—C14 | 1.405 (2) |
| C1—C2 | 1.469 (2) | C9—C10 | 1.415 (2) |
| C2—C7 | 1.383 (2) | C10—C11 | 1.397 (2) |
| C2—C3 | 1.384 (2) | C10—C15 | 1.472 (2) |
| C3—C4 | 1.375 (3) | C11—C12 | 1.371 (3) |
| C3—H3 | 0.98 (2) | C11—H11 | 0.96 (2) |
| C4—C5 | 1.387 (3) | C12—C13 | 1.380 (3) |
| C4—H4 | 0.93 (2) | C12—H12 | 0.93 (2) |
| C5—C6 | 1.382 (3) | C13—C14 | 1.378 (2) |
| C5—H5 | 0.94 (2) | C13—H13 | 0.98 (2) |
| C6—C7 | 1.382 (2) | C14—H14 | 0.948 (19) |
| C6—H6 | 0.963 (19) | C15—O3 | 1.2271 (19) |
| C7—C8 | 1.501 (2) | C15—O4 | 1.3168 (19) |
| C8—N1 | 1.409 (2) | ||
| C1—O2—C8 | 110.76 (12) | N1—C8—C7 | 115.34 (14) |
| C15—O4—H4A | 109.6 (15) | O2—C8—C7 | 103.22 (12) |
| C9—N1—C8 | 122.22 (14) | N1—C8—H8 | 110.1 (10) |
| C9—N1—H1 | 118.1 (13) | O2—C8—H8 | 104.0 (10) |
| C8—N1—H1 | 118.7 (13) | C7—C8—H8 | 111.9 (10) |
| O1—C1—O2 | 121.82 (16) | N1—C9—C14 | 120.64 (15) |
| O1—C1—C2 | 129.81 (16) | N1—C9—C10 | 121.49 (14) |
| O2—C1—C2 | 108.36 (13) | C14—C9—C10 | 117.86 (14) |
| C7—C2—C3 | 121.61 (16) | C11—C10—C9 | 119.13 (15) |
| C7—C2—C1 | 108.84 (14) | C11—C10—C15 | 118.49 (14) |
| C3—C2—C1 | 129.51 (15) | C9—C10—C15 | 122.37 (14) |
| C4—C3—C2 | 117.92 (17) | C12—C11—C10 | 122.10 (16) |
| C4—C3—H3 | 122.0 (12) | C12—C11—H11 | 121.2 (11) |
| C2—C3—H3 | 120.0 (12) | C10—C11—H11 | 116.7 (11) |
| C3—C4—C5 | 120.56 (18) | C11—C12—C13 | 118.70 (16) |
| C3—C4—H4 | 120.3 (13) | C11—C12—H12 | 119.0 (12) |
| C5—C4—H4 | 119.1 (13) | C13—C12—H12 | 122.3 (13) |
| C6—C5—C4 | 121.62 (19) | C14—C13—C12 | 121.22 (17) |
| C6—C5—H5 | 120.1 (12) | C14—C13—H13 | 117.3 (11) |
| C4—C5—H5 | 118.3 (12) | C12—C13—H13 | 121.5 (11) |
| C5—C6—C7 | 117.75 (17) | C13—C14—C9 | 120.98 (16) |
| C5—C6—H6 | 122.0 (12) | C13—C14—H14 | 118.8 (11) |
| C7—C6—H6 | 120.3 (12) | C9—C14—H14 | 120.2 (11) |
| C6—C7—C2 | 120.54 (16) | O3—C15—O4 | 121.99 (15) |
| C6—C7—C8 | 130.55 (15) | O3—C15—C10 | 123.52 (14) |
| C2—C7—C8 | 108.71 (14) | O4—C15—C10 | 114.49 (13) |
| N1—C8—O2 | 111.53 (14) | ||
| O1—C1—O2—C8 | 177.50 (16) | N1—C8—O2—C1 | 127.43 (15) |
| C2—C1—O2—C8 | −1.67 (18) | C7—C8—O2—C1 | 3.01 (18) |
| O1—C1—C2—C7 | −179.60 (18) | O2—C8—N1—C9 | 72.79 (19) |
| O2—C1—C2—C7 | −0.52 (19) | C7—C8—N1—C9 | −169.91 (14) |
| O1—C1—C2—C3 | −2.1 (3) | C14—C9—N1—C8 | −4.3 (2) |
| O2—C1—C2—C3 | 177.00 (17) | C10—C9—N1—C8 | 174.57 (15) |
| C7—C2—C3—C4 | 0.0 (3) | N1—C9—C10—C11 | −177.90 (15) |
| C1—C2—C3—C4 | −177.23 (17) | C14—C9—C10—C11 | 1.0 (2) |
| C2—C3—C4—C5 | −0.1 (3) | N1—C9—C10—C15 | 1.1 (2) |
| C3—C4—C5—C6 | 0.1 (3) | C14—C9—C10—C15 | −179.97 (15) |
| C4—C5—C6—C7 | 0.0 (3) | C9—C10—C11—C12 | −1.2 (2) |
| C5—C6—C7—C2 | −0.1 (3) | C15—C10—C11—C12 | 179.71 (16) |
| C5—C6—C7—C8 | 174.15 (19) | C10—C11—C12—C13 | 0.9 (3) |
| C3—C2—C7—C6 | 0.1 (3) | C11—C12—C13—C14 | −0.4 (3) |
| C1—C2—C7—C6 | 177.86 (16) | C12—C13—C14—C9 | 0.3 (3) |
| C3—C2—C7—C8 | −175.31 (16) | N1—C9—C14—C13 | 178.36 (16) |
| C1—C2—C7—C8 | 2.45 (19) | C10—C9—C14—C13 | −0.5 (2) |
| C6—C7—C8—N1 | 60.0 (3) | C11—C10—C15—O3 | −177.61 (16) |
| C2—C7—C8—N1 | −125.16 (15) | C9—C10—C15—O3 | 3.4 (2) |
| C6—C7—C8—O2 | −178.07 (18) | C11—C10—C15—O4 | 1.8 (2) |
| C2—C7—C8—O2 | −3.27 (18) | C9—C10—C15—O4 | −177.24 (14) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1···O3 | 0.86 (2) | 2.074 (19) | 2.7004 (18) | 129.3 (16) |
| N1—H1···O1i | 0.86 (2) | 2.58 (2) | 3.281 (2) | 138.9 (15) |
| O4—H4A···O3ii | 0.97 (3) | 1.67 (3) | 2.6329 (17) | 174 (2) |
| C4—H4···O2iii | 0.93 (2) | 2.58 (2) | 3.464 (2) | 158.9 (17) |
| C8—H8···O1iv | 0.983 (18) | 2.580 (17) | 3.403 (2) | 141.4 (12) |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) −x+1, −y, −z+2; (iii) x+1, −y+1/2, z+1/2; (iv) x, −y+1/2, z−1/2.
Footnotes
3-Substituted phthalides. Part XXXIII.
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HK2434).
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680800754X/hk2434sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S160053680800754X/hk2434Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


