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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Mar 12;64(Pt 4):o689. doi: 10.1107/S1600536808006156

6-Amino-3-methyl-4-(4-nitro­phen­yl)-1-phenyl­pyrazolo[3,4-b]pyridine-5-carbonitrile

Xin-Ying Zhang a,*, Xiao-Yan Li a, Xia Wang a, Xue-Sen Fan a,*, Gui-Rong Qu a
PMCID: PMC2961049  PMID: 21202081

Abstract

The title compound, C20H14N6O2, contains four rings. The dihedral angle between the pyridine ring and the pyrazole ring is 1.9 (1)°, i.e. almost coplanar, which gives rise to a conjugated structure. The dihedral angle between the nitro-substituted phenyl ring and the pyridine ring is 76.3 (1)° and that between the pyrazole ring and the non-substituted phenyl ring is 40.5 (1)°. In the crystal structure, symmetry-related mol­ecules are linked by N—H⋯O and C—H⋯N hydrogen bonds.

Related literature

For related structures, see: Quiroga et al. (1999); Zhu et al. (2005). For the biological and pharmacological activities, see: Kamal et al. (1991); Straub et al. (2001); Sekikawa et al. (1973).graphic file with name e-64-0o689-scheme1.jpg

Experimental

Crystal data

  • C20H14N6O2

  • M r = 370.37

  • Monoclinic, Inline graphic

  • a = 16.470 (11) Å

  • b = 9.742 (7) Å

  • c = 23.46 (2) Å

  • β = 105.857 (8)°

  • V = 3621 (5) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 294 (2) K

  • 0.39 × 0.25 × 0.15 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.945, T max = 0.986

  • 13443 measured reflections

  • 3374 independent reflections

  • 2287 reflections with I > 2σ(I)

  • R int = 0.027

Refinement

  • R[F 2 > 2σ(F 2)] = 0.042

  • wR(F 2) = 0.121

  • S = 1.02

  • 3374 reflections

  • 254 parameters

  • H-atom parameters constrained

  • Δρmax = 0.18 e Å−3

  • Δρmin = −0.16 e Å−3

Data collection: SMART (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808006156/su2046sup1.cif

e-64-0o689-sup1.cif (21.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808006156/su2046Isup2.hkl

e-64-0o689-Isup2.hkl (165.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N5—H5A⋯O2i 0.86 2.13 2.981 (3) 168
C14—H14⋯N2ii 0.93 2.61 3.529 (3) 168

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

This work was supported by the National Natural Science Foundation of China (No. 20772025) and the Program for Science & Technology Innovation Talents in Universities of Henan Province (No. 2008 HASTIT006).

supplementary crystallographic information

Comment

The structure of the title compound, (I), is shown below. Dimensions are available in the archived CIF.

For related literature, see Quiroga et al. (1999); Zhu et al. (2005). For the biological and pharmacological activities, see Kamal et al. (1991); Straub et al. (2001); Sekikawa et al. (1973).

Experimental

The title compound was prepared by the following procedure: To 1 ml of 1-butyl-3-methylimidazolium tetrafluoroborate ([bmim][BF4]) were added 4-nitrobenzaldehyde (1 mmol), malononitrile (1 mmol) and 5-amino-3-methyl-1-phenylpyrazole (1 mmol). The reaction mixture was stirred at 80°C for 10 hrs. The yellow solid product that was obtained was collected by suction and rinsed with water and ethanol (yield 93%). Single crystals of the title compound were obtained by slow evaporation from ethanol.

Refinement

H-atoms were included in calculated positions and treated as riding atoms: N—H = 0.86 Å and C—H = 0.93 - 0.96 Å with Uiso(H) = 1.5Ueq(CH3) and 1.2Ueq(NH2,CH).

Figures

Fig. 1.

Fig. 1.

Molecular structure of the title compound, with displacement ellipsoids drawn at the 30% probability level.

Crystal data

C20H14N6O2 F000 = 1536
Mr = 370.37 Dx = 1.359 Mg m3
Monoclinic, C2/c Mo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 2825 reflections
a = 16.470 (11) Å θ = 2.5–21.6º
b = 9.742 (7) Å µ = 0.09 mm1
c = 23.46 (2) Å T = 294 (2) K
β = 105.857 (8)º Block, yellow
V = 3621 (5) Å3 0.39 × 0.25 × 0.15 mm
Z = 8

Data collection

Bruker SMART CCD area-detector diffractometer 3374 independent reflections
Radiation source: fine-focus sealed tube 2287 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.027
T = 294(2) K θmax = 25.5º
φ and ω scans θmin = 2.5º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996) h = −19→19
Tmin = 0.945, Tmax = 0.986 k = −11→11
13443 measured reflections l = −28→28

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042 H-atom parameters constrained
wR(F2) = 0.122   w = 1/[σ2(Fo2) + (0.0546P)2 + 1.3917P] where P = (Fo2 + 2Fc2)/3
S = 1.02 (Δ/σ)max < 0.001
3374 reflections Δρmax = 0.18 e Å3
254 parameters Δρmin = −0.16 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR andgoodness of fit S are based on F2, conventional R-factors R are basedon F, with F set to zero for negative F2. The threshold expression ofF2 > σ(F2) is used only for calculating R-factors(gt) etc. and isnot relevant to the choice of reflections for refinement. R-factors basedon F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.14291 (11) 0.3249 (2) 0.22385 (8) 0.0539 (5)
C2 0.13161 (11) 0.17956 (19) 0.22657 (8) 0.0508 (4)
C3 0.12907 (11) 0.06720 (19) 0.18900 (8) 0.0514 (5)
C4 0.11731 (12) −0.0608 (2) 0.21136 (8) 0.0579 (5)
C5 0.10829 (12) −0.0751 (2) 0.27046 (8) 0.0586 (5)
C6 0.11882 (11) 0.1536 (2) 0.28254 (8) 0.0515 (5)
C7 0.16473 (14) 0.4076 (2) 0.17675 (9) 0.0675 (6)
H7A 0.1171 0.4109 0.1424 0.101*
H7B 0.2117 0.3663 0.1665 0.101*
H7C 0.1795 0.4992 0.1910 0.101*
C8 0.11094 (16) −0.1792 (2) 0.17454 (10) 0.0771 (7)
C9 0.13676 (11) 0.08314 (19) 0.12762 (8) 0.0516 (5)
C10 0.06928 (13) 0.1307 (3) 0.08327 (9) 0.0750 (7)
H10 0.0187 0.1510 0.0919 0.090*
C11 0.07559 (14) 0.1485 (2) 0.02644 (9) 0.0749 (7)
H11 0.0300 0.1808 −0.0034 0.090*
C12 0.15017 (13) 0.11769 (19) 0.01483 (8) 0.0573 (5)
C13 0.21832 (13) 0.0685 (2) 0.05755 (9) 0.0656 (6)
H13 0.2684 0.0471 0.0484 0.079*
C14 0.21111 (12) 0.0516 (2) 0.11416 (8) 0.0617 (5)
H14 0.2568 0.0184 0.1437 0.074*
C15 0.11107 (11) 0.3128 (2) 0.36614 (8) 0.0539 (5)
C16 0.14851 (12) 0.2328 (2) 0.41484 (9) 0.0610 (5)
H16 0.1792 0.1550 0.4107 0.073*
C17 0.13988 (13) 0.2697 (2) 0.47001 (9) 0.0674 (6)
H17 0.1640 0.2155 0.5029 0.081*
C18 0.09585 (14) 0.3862 (3) 0.47639 (10) 0.0732 (7)
H18 0.0910 0.4111 0.5136 0.088*
C19 0.05918 (14) 0.4654 (2) 0.42781 (11) 0.0722 (6)
H19 0.0294 0.5440 0.4322 0.087*
C20 0.06610 (12) 0.4293 (2) 0.37226 (10) 0.0636 (5)
H20 0.0408 0.4828 0.3394 0.076*
N1 0.12015 (10) 0.27857 (17) 0.30914 (7) 0.0569 (4)
N2 0.13518 (10) 0.38354 (17) 0.27275 (7) 0.0592 (4)
N3 0.10738 (10) 0.03211 (17) 0.30563 (6) 0.0575 (4)
N4 0.1045 (2) −0.2721 (2) 0.14393 (10) 0.1197 (9)
N5 0.10113 (12) −0.20117 (18) 0.29226 (8) 0.0784 (6)
H5A 0.0962 −0.2102 0.3276 0.094*
H5B 0.1015 −0.2726 0.2708 0.094*
N6 0.15858 (14) 0.14160 (19) −0.04520 (8) 0.0750 (5)
O1 0.22406 (12) 0.1080 (2) −0.05634 (7) 0.0962 (6)
O2 0.09960 (14) 0.1956 (2) −0.08097 (7) 0.1125 (7)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0489 (10) 0.0631 (12) 0.0496 (11) 0.0009 (9) 0.0132 (8) 0.0005 (9)
C2 0.0476 (10) 0.0611 (12) 0.0439 (10) 0.0024 (8) 0.0128 (8) −0.0009 (9)
C3 0.0479 (10) 0.0626 (12) 0.0425 (10) 0.0093 (9) 0.0102 (8) 0.0001 (9)
C4 0.0672 (13) 0.0611 (12) 0.0430 (10) 0.0062 (9) 0.0111 (9) −0.0021 (9)
C5 0.0655 (12) 0.0633 (13) 0.0455 (11) −0.0049 (10) 0.0128 (9) −0.0017 (9)
C6 0.0499 (11) 0.0610 (12) 0.0439 (10) −0.0028 (9) 0.0135 (8) −0.0063 (9)
C7 0.0721 (13) 0.0687 (13) 0.0632 (13) −0.0008 (11) 0.0210 (10) 0.0070 (11)
C8 0.1150 (19) 0.0602 (14) 0.0533 (13) 0.0113 (13) 0.0184 (12) 0.0015 (11)
C9 0.0545 (11) 0.0572 (11) 0.0428 (10) 0.0114 (9) 0.0128 (8) −0.0004 (8)
C10 0.0606 (13) 0.1155 (19) 0.0501 (11) 0.0348 (12) 0.0173 (10) 0.0073 (12)
C11 0.0726 (14) 0.1049 (18) 0.0449 (11) 0.0368 (13) 0.0120 (10) 0.0089 (11)
C12 0.0760 (13) 0.0552 (11) 0.0441 (10) 0.0137 (10) 0.0221 (9) −0.0006 (9)
C13 0.0623 (12) 0.0805 (14) 0.0601 (13) 0.0194 (11) 0.0267 (10) 0.0038 (10)
C14 0.0560 (12) 0.0791 (14) 0.0490 (11) 0.0208 (10) 0.0130 (9) 0.0070 (10)
C15 0.0470 (10) 0.0664 (12) 0.0498 (11) −0.0113 (9) 0.0157 (8) −0.0135 (9)
C16 0.0535 (11) 0.0732 (13) 0.0557 (12) −0.0040 (10) 0.0141 (9) −0.0105 (10)
C17 0.0603 (12) 0.0911 (16) 0.0513 (11) −0.0140 (11) 0.0161 (9) −0.0092 (11)
C18 0.0684 (14) 0.0973 (18) 0.0617 (14) −0.0247 (13) 0.0310 (11) −0.0278 (13)
C19 0.0646 (13) 0.0787 (15) 0.0832 (17) −0.0096 (11) 0.0370 (12) −0.0239 (13)
C20 0.0565 (12) 0.0698 (13) 0.0672 (13) −0.0063 (10) 0.0216 (10) −0.0086 (11)
N1 0.0641 (10) 0.0628 (10) 0.0464 (9) −0.0078 (8) 0.0193 (7) −0.0086 (8)
N2 0.0627 (10) 0.0615 (10) 0.0540 (10) −0.0048 (8) 0.0171 (8) −0.0040 (8)
N3 0.0638 (10) 0.0638 (11) 0.0449 (9) −0.0083 (8) 0.0151 (7) −0.0043 (8)
N4 0.206 (3) 0.0672 (14) 0.0819 (15) 0.0173 (16) 0.0322 (16) −0.0113 (13)
N5 0.1225 (16) 0.0619 (11) 0.0510 (10) −0.0128 (10) 0.0238 (10) −0.0003 (8)
N6 0.1076 (16) 0.0713 (12) 0.0516 (10) 0.0168 (11) 0.0311 (11) 0.0007 (9)
O1 0.1160 (14) 0.1135 (14) 0.0769 (11) 0.0135 (11) 0.0567 (11) 0.0013 (10)
O2 0.1504 (18) 0.1383 (16) 0.0511 (9) 0.0640 (14) 0.0312 (10) 0.0233 (10)

Geometric parameters (Å, °)

C1—N2 1.318 (3) C12—C13 1.371 (3)
C1—C2 1.431 (3) C12—N6 1.471 (3)
C1—C7 1.489 (3) C13—C14 1.375 (3)
C2—C3 1.399 (3) C13—H13 0.9300
C2—C6 1.408 (3) C14—H14 0.9300
C3—C4 1.386 (3) C15—C16 1.381 (3)
C3—C9 1.488 (3) C15—C20 1.384 (3)
C4—C8 1.428 (3) C15—N1 1.425 (2)
C4—C5 1.441 (3) C16—C17 1.387 (3)
C5—N3 1.333 (2) C16—H16 0.9300
C5—N5 1.348 (3) C17—C18 1.376 (3)
C6—N3 1.336 (2) C17—H17 0.9300
C6—N1 1.365 (2) C18—C19 1.372 (3)
C7—H7A 0.9600 C18—H18 0.9300
C7—H7B 0.9600 C19—C20 1.384 (3)
C7—H7C 0.9600 C19—H19 0.9300
C8—N4 1.142 (3) C20—H20 0.9300
C9—C10 1.378 (3) N1—N2 1.397 (2)
C9—C14 1.380 (3) N5—H5A 0.8600
C10—C11 1.376 (3) N5—H5B 0.8600
C10—H10 0.9300 N6—O2 1.216 (2)
C11—C12 1.362 (3) N6—O1 1.222 (2)
C11—H11 0.9300
N2—C1—C2 110.21 (17) C13—C12—N6 118.86 (19)
N2—C1—C7 120.72 (18) C12—C13—C14 118.58 (18)
C2—C1—C7 129.00 (18) C12—C13—H13 120.7
C3—C2—C6 117.42 (18) C14—C13—H13 120.7
C3—C2—C1 136.70 (18) C13—C14—C9 120.68 (17)
C6—C2—C1 105.87 (16) C13—C14—H14 119.7
C4—C3—C2 116.66 (17) C9—C14—H14 119.7
C4—C3—C9 121.18 (17) C16—C15—C20 120.50 (19)
C2—C3—C9 122.16 (17) C16—C15—N1 120.44 (18)
C3—C4—C8 119.51 (18) C20—C15—N1 119.04 (18)
C3—C4—C5 120.85 (17) C15—C16—C17 119.3 (2)
C8—C4—C5 119.60 (19) C15—C16—H16 120.4
N3—C5—N5 117.52 (18) C17—C16—H16 120.4
N3—C5—C4 122.75 (19) C18—C17—C16 120.4 (2)
N5—C5—C4 119.73 (18) C18—C17—H17 119.8
N3—C6—N1 126.23 (17) C16—C17—H17 119.8
N3—C6—C2 127.62 (17) C19—C18—C17 119.9 (2)
N1—C6—C2 106.15 (17) C19—C18—H18 120.0
C1—C7—H7A 109.5 C17—C18—H18 120.0
C1—C7—H7B 109.5 C18—C19—C20 120.5 (2)
H7A—C7—H7B 109.5 C18—C19—H19 119.7
C1—C7—H7C 109.5 C20—C19—H19 119.7
H7A—C7—H7C 109.5 C19—C20—C15 119.4 (2)
H7B—C7—H7C 109.5 C19—C20—H20 120.3
N4—C8—C4 178.2 (3) C15—C20—H20 120.3
C10—C9—C14 119.01 (18) C6—N1—N2 110.91 (15)
C10—C9—C3 120.08 (17) C6—N1—C15 130.13 (16)
C14—C9—C3 120.91 (16) N2—N1—C15 118.94 (16)
C11—C10—C9 120.98 (19) C1—N2—N1 106.83 (16)
C11—C10—H10 119.5 C5—N3—C6 114.61 (17)
C9—C10—H10 119.5 C5—N5—H5A 120.0
C12—C11—C10 118.46 (18) C5—N5—H5B 120.0
C12—C11—H11 120.8 H5A—N5—H5B 120.0
C10—C11—H11 120.8 O2—N6—O1 123.6 (2)
C11—C12—C13 122.28 (18) O2—N6—C12 117.6 (2)
C11—C12—N6 118.84 (18) O1—N6—C12 118.81 (19)
N2—C1—C2—C3 176.8 (2) N6—C12—C13—C14 177.45 (19)
C7—C1—C2—C3 −6.2 (4) C12—C13—C14—C9 0.1 (3)
N2—C1—C2—C6 −1.8 (2) C10—C9—C14—C13 0.7 (3)
C7—C1—C2—C6 175.12 (18) C3—C9—C14—C13 −178.96 (19)
C6—C2—C3—C4 −2.4 (2) C20—C15—C16—C17 0.6 (3)
C1—C2—C3—C4 179.1 (2) N1—C15—C16—C17 178.90 (17)
C6—C2—C3—C9 176.39 (16) C15—C16—C17—C18 −1.2 (3)
C1—C2—C3—C9 −2.1 (3) C16—C17—C18—C19 0.9 (3)
C2—C3—C4—C8 177.67 (19) C17—C18—C19—C20 0.0 (3)
C9—C3—C4—C8 −1.1 (3) C18—C19—C20—C15 −0.5 (3)
C2—C3—C4—C5 0.0 (3) C16—C15—C20—C19 0.2 (3)
C9—C3—C4—C5 −178.80 (17) N1—C15—C20—C19 −178.06 (17)
C3—C4—C5—N3 2.7 (3) N3—C6—N1—N2 178.85 (17)
C8—C4—C5—N3 −174.99 (19) C2—C6—N1—N2 −1.3 (2)
C3—C4—C5—N5 −176.71 (18) N3—C6—N1—C15 0.7 (3)
C8—C4—C5—N5 5.6 (3) C2—C6—N1—C15 −179.46 (17)
C3—C2—C6—N3 2.7 (3) C16—C15—N1—C6 40.1 (3)
C1—C2—C6—N3 −178.33 (18) C20—C15—N1—C6 −141.6 (2)
C3—C2—C6—N1 −177.13 (15) C16—C15—N1—N2 −137.89 (18)
C1—C2—C6—N1 1.82 (19) C20—C15—N1—N2 40.4 (2)
C3—C4—C8—N4 −45 (11) C2—C1—N2—N1 1.0 (2)
C5—C4—C8—N4 132 (10) C7—C1—N2—N1 −176.20 (16)
C4—C3—C9—C10 102.6 (2) C6—N1—N2—C1 0.2 (2)
C2—C3—C9—C10 −76.2 (3) C15—N1—N2—C1 178.58 (15)
C4—C3—C9—C14 −77.8 (3) N5—C5—N3—C6 176.90 (17)
C2—C3—C9—C14 103.5 (2) C4—C5—N3—C6 −2.5 (3)
C14—C9—C10—C11 −0.9 (3) N1—C6—N3—C5 179.64 (18)
C3—C9—C10—C11 178.8 (2) C2—C6—N3—C5 −0.2 (3)
C9—C10—C11—C12 0.2 (4) C11—C12—N6—O2 4.2 (3)
C10—C11—C12—C13 0.7 (4) C13—C12—N6—O2 −174.2 (2)
C10—C11—C12—N6 −177.6 (2) C11—C12—N6—O1 −176.6 (2)
C11—C12—C13—C14 −0.8 (3) C13—C12—N6—O1 5.1 (3)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N5—H5A···O2i 0.86 2.13 2.981 (3) 168
C14—H14···N2ii 0.93 2.61 3.529 (3) 168

Symmetry codes: (i) x, −y, z+1/2; (ii) −x+1/2, y−1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SU2046).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808006156/su2046sup1.cif

e-64-0o689-sup1.cif (21.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808006156/su2046Isup2.hkl

e-64-0o689-Isup2.hkl (165.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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