Abstract
In the title compound, C15H15N3OS, the thiourea group is stabilized by an intramolecular hydrogen bond between the carbonyl O atom and the thioamide group. A C—H⋯N intramolecular hydrogen bond is also present. Molecules are linked by intermolecular N—H⋯O and C—H⋯S hydrogen bonds.
Related literature
For the crystal structure of N-(3-iodophenyl)-N′-(2-methylbenzoyl)thiourea, see: Yusof et al. (2007 ▶). For bond-length data, see: Allen et al. (1987 ▶).
Experimental
Crystal data
C15H15N3OS
M r = 285.36
Monoclinic,
a = 7.955 (3) Å
b = 7.811 (3) Å
c = 23.414 (8) Å
β = 90.827 (6)°
V = 1454.6 (9) Å3
Z = 4
Mo Kα radiation
μ = 0.22 mm−1
T = 298 (2) K
0.49 × 0.46 × 0.17 mm
Data collection
Bruker SMART APEX CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.899, T max = 0.963
7524 measured reflections
2710 independent reflections
2099 reflections with I > 2σ(I)
R int = 0.018
Refinement
R[F 2 > 2σ(F 2)] = 0.041
wR(F 2) = 0.112
S = 1.02
2710 reflections
191 parameters
1 restraint
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.24 e Å−3
Δρmin = −0.13 e Å−3
Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995 ▶) and PLATON (Spek, 2003 ▶).
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808009513/sg2229sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808009513/sg2229Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N2—H2⋯O1 | 0.86 (2) | 2.04 (2) | 2.697 (2) | 132.2 (18) |
| C15—H15A⋯N2 | 0.96 | 2.56 | 2.961 | 105 |
| N2—H2⋯O1i | 0.86 (2) | 2.30 (2) | 3.021 (2) | 142 (2) |
| C13—H13⋯S1ii | 0.93 | 2.85 | 3.700 | 154 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
The authors thank the Ministry of Higher Education of Malaysia for Fundamental Research Grants UKM-ST-01-FRGS-0003-2006 and UMT-FRGS-59001, and Universiti Kebangsaan Malaysia and HEJ Research Institute of Chemistry, University of Karachi, for research facilities.
supplementary crystallographic information
Comment
The title compound, (I), is analogous to N-(3-iodophenyl)-N'-(2-methylbenzoyl) thiourea (II), (Yusof et al., 2007) except that the iodophenyl group is replaced by the 3-methylpyridine group (Fig.1). The bond lengths and angles are in normal range (Allen et al., 1987). The central thiourea moiety, S1/N1/N2/C9, pyridine, N3/(C10—C14), and benzene,(C1—C6) rings are each planar with maximum deviation of 0.033 (2)Å for N2 atom from the least square plane. The central thiourea moiety makes dihedral angle with the pyridine and benzene rings of 64.58 (8) and 62.03 (8)° respectively. The dihedral angle between the pyridine and benzene rings (4.03 (10)°) is smaller compared to that in (II) of 31.88 (9)°. The molecule maintains the trans-cis geometry of the thiourea moiety which is stabilized by the intrahydrogen bond between the carbonyl oxygen atom O1 and the thioamide hydrogen atom, H15A. In the crystal structure, the molecules are linked by the N2—H2···O1 and C13—H13···S1 intermolecular hydrogen bonds (symmtery codes as in Table 2).
Experimental
The mixture of 2-methylbenzoyl chloride (9.720 g, 0.025mole) with the equimolar amount of ammonium thiocyanate (1.903 g, 0.025 mol) and 2-amino-3-methyl pyridine,(2.703 g, 0.025 mol) in 40 ml dry acetone was refluxed with stirring for 4 h. The solution was filtered and left to evaporate at room temperature. The colourless crystals obtained after a few days, was found suitable for X-ray investigations. The yield was 85% and the melting point is 412.3–413.8 K.
Refinement
H atoms on the C of methyl, phenyl and pyridine were positioned geomatrically with C—H=0.96 Å and 0.93 Å respectively and constrained to ride on their parent atoms with Uiso(H)= 1.2Ueq(CH) and 1.5Ueq(CH3). The hydrogen atoms attached to the amino nitrogen atoms were located from the difference Fourier map and refined isotropically.
Figures
Fig. 1.
The molecular Structure of (1) with displacement ellipsoids drawn at 50% probability level.The dashed lines indicates the intramolecular hydrogen bonds.
Fig. 2.
A packing diagram of (1). Hydrogen bonds are shown by dashed lines.
Crystal data
| C15H15N3OS | F000 = 600 |
| Mr = 285.36 | Dx = 1.303 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation λ = 0.71073 Å |
| Hall symbol: -P 2yn | Cell parameters from 2292 reflections |
| a = 7.955 (3) Å | θ = 1.7–25.5º |
| b = 7.811 (3) Å | µ = 0.22 mm−1 |
| c = 23.414 (8) Å | T = 298 (2) K |
| β = 90.827 (6)º | Block, colourless |
| V = 1454.6 (9) Å3 | 0.49 × 0.46 × 0.17 mm |
| Z = 4 |
Data collection
| Bruker SMART APEX CCD area-detector diffractometer | 2710 independent reflections |
| Radiation source: fine-focus sealed tube | 2099 reflections with I > 2σ(I) |
| Monochromator: graphite | Rint = 0.019 |
| Detector resolution: 83.66 pixels mm-1 | θmax = 25.5º |
| T = 298(2) K | θmin = 1.7º |
| ω scans | h = −9→9 |
| Absorption correction: multi-scan(SADABS; Bruker, 2000) | k = −9→9 |
| Tmin = 0.899, Tmax = 0.963 | l = −16→28 |
| 7524 measured reflections |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.041 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.112 | w = 1/[σ2(Fo2) + (0.0591P)2 + 0.3029P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.02 | (Δ/σ)max < 0.001 |
| 2710 reflections | Δρmax = 0.24 e Å−3 |
| 191 parameters | Δρmin = −0.13 e Å−3 |
| 1 restraint | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| S1 | 0.34243 (7) | 0.20705 (8) | 0.17685 (2) | 0.0662 (2) | |
| O1 | 0.40058 (17) | 0.34898 (19) | −0.00872 (5) | 0.0599 (4) | |
| N1 | 0.26335 (19) | 0.2529 (2) | 0.06915 (6) | 0.0485 (4) | |
| H1 | 0.1847 (19) | 0.183 (2) | 0.0784 (8) | 0.056 (6)* | |
| N2 | 0.49690 (18) | 0.4025 (2) | 0.10075 (6) | 0.0460 (4) | |
| H2 | 0.513 (2) | 0.429 (3) | 0.0656 (9) | 0.057 (6)* | |
| N3 | 0.77881 (19) | 0.3995 (2) | 0.12320 (7) | 0.0579 (4) | |
| C1 | 0.1548 (2) | 0.1298 (2) | −0.07366 (8) | 0.0497 (5) | |
| C2 | 0.0123 (3) | 0.0935 (3) | −0.10668 (9) | 0.0641 (6) | |
| H2A | 0.0238 | 0.0305 | −0.1401 | 0.077* | |
| C3 | −0.1439 (3) | 0.1477 (3) | −0.09150 (10) | 0.0707 (7) | |
| H3 | −0.2358 | 0.1239 | −0.1152 | 0.085* | |
| C4 | −0.1669 (3) | 0.2364 (3) | −0.04197 (11) | 0.0675 (6) | |
| H4 | −0.2737 | 0.2720 | −0.0316 | 0.081* | |
| C5 | −0.0286 (2) | 0.2727 (3) | −0.00736 (9) | 0.0537 (5) | |
| H5 | −0.0430 | 0.3303 | 0.0270 | 0.064* | |
| C6 | 0.1310 (2) | 0.2234 (2) | −0.02376 (7) | 0.0434 (4) | |
| C7 | 0.3230 (3) | 0.0627 (3) | −0.09092 (10) | 0.0759 (7) | |
| H7A | 0.3091 | −0.0141 | −0.1226 | 0.114* | |
| H7B | 0.3742 | 0.0028 | −0.0594 | 0.114* | |
| H7C | 0.3936 | 0.1565 | −0.1018 | 0.114* | |
| C8 | 0.2781 (2) | 0.2805 (2) | 0.01149 (7) | 0.0433 (4) | |
| C9 | 0.3749 (2) | 0.2940 (2) | 0.11353 (7) | 0.0457 (4) | |
| C10 | 0.6291 (2) | 0.4528 (2) | 0.13916 (7) | 0.0437 (4) | |
| C11 | 0.6000 (3) | 0.5570 (3) | 0.18580 (8) | 0.0554 (5) | |
| C12 | 0.7424 (3) | 0.5988 (3) | 0.21814 (9) | 0.0688 (6) | |
| H12 | 0.7315 | 0.6667 | 0.2505 | 0.083* | |
| C13 | 0.8968 (3) | 0.5421 (3) | 0.20313 (10) | 0.0745 (7) | |
| H13 | 0.9914 | 0.5683 | 0.2252 | 0.089* | |
| C14 | 0.9096 (3) | 0.4468 (3) | 0.15529 (10) | 0.0732 (7) | |
| H14 | 1.0162 | 0.4123 | 0.1442 | 0.088* | |
| C15 | 0.4302 (3) | 0.6260 (4) | 0.20004 (11) | 0.0852 (8) | |
| H15A | 0.3581 | 0.6201 | 0.1669 | 0.128* | |
| H15B | 0.4408 | 0.7430 | 0.2121 | 0.128* | |
| H15C | 0.3829 | 0.5593 | 0.2303 | 0.128* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0669 (4) | 0.0892 (4) | 0.0423 (3) | −0.0180 (3) | −0.0071 (2) | 0.0199 (3) |
| O1 | 0.0565 (8) | 0.0822 (10) | 0.0411 (7) | −0.0295 (7) | 0.0001 (6) | 0.0024 (7) |
| N1 | 0.0422 (9) | 0.0642 (10) | 0.0390 (8) | −0.0158 (7) | −0.0032 (6) | 0.0087 (7) |
| N2 | 0.0425 (8) | 0.0628 (10) | 0.0325 (8) | −0.0091 (7) | −0.0020 (6) | 0.0037 (7) |
| N3 | 0.0422 (9) | 0.0730 (11) | 0.0585 (10) | −0.0011 (8) | −0.0012 (7) | −0.0153 (8) |
| C1 | 0.0598 (12) | 0.0452 (10) | 0.0441 (10) | −0.0082 (9) | −0.0028 (8) | 0.0020 (8) |
| C2 | 0.0840 (16) | 0.0569 (13) | 0.0508 (11) | −0.0154 (12) | −0.0169 (11) | −0.0021 (10) |
| C3 | 0.0697 (15) | 0.0612 (13) | 0.0801 (16) | −0.0157 (11) | −0.0364 (13) | 0.0138 (12) |
| C4 | 0.0452 (12) | 0.0651 (14) | 0.0919 (17) | −0.0024 (10) | −0.0117 (11) | 0.0112 (13) |
| C5 | 0.0485 (12) | 0.0559 (12) | 0.0567 (12) | −0.0043 (9) | −0.0023 (9) | 0.0011 (9) |
| C6 | 0.0455 (10) | 0.0432 (9) | 0.0413 (9) | −0.0070 (8) | −0.0044 (7) | 0.0061 (8) |
| C7 | 0.0810 (16) | 0.0757 (16) | 0.0713 (15) | 0.0002 (13) | 0.0119 (12) | −0.0179 (12) |
| C8 | 0.0434 (10) | 0.0456 (10) | 0.0408 (9) | −0.0068 (8) | −0.0005 (7) | 0.0018 (8) |
| C9 | 0.0387 (10) | 0.0565 (11) | 0.0418 (10) | −0.0005 (8) | −0.0014 (7) | 0.0026 (8) |
| C10 | 0.0435 (10) | 0.0508 (10) | 0.0367 (9) | −0.0025 (8) | −0.0028 (7) | 0.0003 (8) |
| C11 | 0.0634 (12) | 0.0592 (12) | 0.0435 (10) | 0.0039 (10) | 0.0008 (9) | −0.0035 (9) |
| C12 | 0.0903 (17) | 0.0698 (15) | 0.0459 (11) | −0.0074 (13) | −0.0106 (11) | −0.0148 (10) |
| C13 | 0.0637 (15) | 0.0915 (18) | 0.0675 (14) | −0.0146 (13) | −0.0233 (11) | −0.0064 (13) |
| C14 | 0.0435 (12) | 0.0973 (18) | 0.0785 (15) | −0.0010 (11) | −0.0096 (10) | −0.0162 (13) |
| C15 | 0.0838 (17) | 0.0948 (18) | 0.0774 (16) | 0.0215 (14) | 0.0110 (13) | −0.0214 (14) |
Geometric parameters (Å, °)
| S1—C9 | 1.6545 (18) | C4—H4 | 0.9300 |
| O1—C8 | 1.214 (2) | C5—C6 | 1.386 (3) |
| N1—C8 | 1.374 (2) | C5—H5 | 0.9300 |
| N1—C9 | 1.394 (2) | C6—C8 | 1.490 (2) |
| N1—H1 | 0.860 (9) | C7—H7A | 0.9600 |
| N2—C9 | 1.326 (2) | C7—H7B | 0.9600 |
| N2—C10 | 1.429 (2) | C7—H7C | 0.9600 |
| N2—H2 | 0.86 (2) | C10—C11 | 1.384 (3) |
| N3—C10 | 1.321 (2) | C11—C12 | 1.392 (3) |
| N3—C14 | 1.327 (3) | C11—C15 | 1.497 (3) |
| C1—C2 | 1.392 (3) | C12—C13 | 1.357 (3) |
| C1—C6 | 1.394 (3) | C12—H12 | 0.9300 |
| C1—C7 | 1.498 (3) | C13—C14 | 1.350 (3) |
| C2—C3 | 1.364 (3) | C13—H13 | 0.9300 |
| C2—H2A | 0.9300 | C14—H14 | 0.9300 |
| C3—C4 | 1.366 (3) | C15—H15A | 0.9600 |
| C3—H3 | 0.9300 | C15—H15B | 0.9600 |
| C4—C5 | 1.386 (3) | C15—H15C | 0.9600 |
| C8—N1—C9 | 129.35 (15) | H7A—C7—H7C | 109.5 |
| C8—N1—H1 | 114.8 (13) | H7B—C7—H7C | 109.5 |
| C9—N1—H1 | 114.6 (13) | O1—C8—N1 | 122.17 (16) |
| C9—N2—C10 | 124.63 (15) | O1—C8—C6 | 122.97 (16) |
| C9—N2—H2 | 119.5 (13) | N1—C8—C6 | 114.85 (14) |
| C10—N2—H2 | 114.5 (13) | N2—C9—N1 | 116.05 (15) |
| C10—N3—C14 | 117.05 (18) | N2—C9—S1 | 126.06 (14) |
| C2—C1—C6 | 116.94 (19) | N1—C9—S1 | 117.88 (13) |
| C2—C1—C7 | 120.18 (19) | N3—C10—C11 | 124.77 (17) |
| C6—C1—C7 | 122.84 (18) | N3—C10—N2 | 113.16 (15) |
| C3—C2—C1 | 122.0 (2) | C11—C10—N2 | 121.92 (16) |
| C3—C2—H2A | 119.0 | C10—C11—C12 | 115.06 (19) |
| C1—C2—H2A | 119.0 | C10—C11—C15 | 123.32 (19) |
| C2—C3—C4 | 120.8 (2) | C12—C11—C15 | 121.6 (2) |
| C2—C3—H3 | 119.6 | C13—C12—C11 | 121.0 (2) |
| C4—C3—H3 | 119.6 | C13—C12—H12 | 119.5 |
| C3—C4—C5 | 119.1 (2) | C11—C12—H12 | 119.5 |
| C3—C4—H4 | 120.5 | C14—C13—C12 | 118.4 (2) |
| C5—C4—H4 | 120.5 | C14—C13—H13 | 120.8 |
| C4—C5—C6 | 120.2 (2) | C12—C13—H13 | 120.8 |
| C4—C5—H5 | 119.9 | N3—C14—C13 | 123.7 (2) |
| C6—C5—H5 | 119.9 | N3—C14—H14 | 118.1 |
| C5—C6—C1 | 120.92 (17) | C13—C14—H14 | 118.1 |
| C5—C6—C8 | 118.59 (16) | C11—C15—H15A | 109.5 |
| C1—C6—C8 | 120.42 (16) | C11—C15—H15B | 109.5 |
| C1—C7—H7A | 109.5 | H15A—C15—H15B | 109.5 |
| C1—C7—H7B | 109.5 | C11—C15—H15C | 109.5 |
| H7A—C7—H7B | 109.5 | H15A—C15—H15C | 109.5 |
| C1—C7—H7C | 109.5 | H15B—C15—H15C | 109.5 |
| C6—C1—C2—C3 | 0.5 (3) | C10—N2—C9—N1 | −176.19 (16) |
| C7—C1—C2—C3 | 177.9 (2) | C10—N2—C9—S1 | 4.8 (3) |
| C1—C2—C3—C4 | −1.8 (3) | C8—N1—C9—N2 | 14.3 (3) |
| C2—C3—C4—C5 | 0.7 (3) | C8—N1—C9—S1 | −166.69 (16) |
| C3—C4—C5—C6 | 1.8 (3) | C14—N3—C10—C11 | 1.6 (3) |
| C4—C5—C6—C1 | −3.1 (3) | C14—N3—C10—N2 | 177.29 (19) |
| C4—C5—C6—C8 | 173.72 (17) | C9—N2—C10—N3 | 113.7 (2) |
| C2—C1—C6—C5 | 2.0 (3) | C9—N2—C10—C11 | −70.4 (3) |
| C7—C1—C6—C5 | −175.40 (18) | N3—C10—C11—C12 | −2.8 (3) |
| C2—C1—C6—C8 | −174.81 (17) | N2—C10—C11—C12 | −178.13 (18) |
| C7—C1—C6—C8 | 7.8 (3) | N3—C10—C11—C15 | 175.1 (2) |
| C9—N1—C8—O1 | 0.3 (3) | N2—C10—C11—C15 | −0.2 (3) |
| C9—N1—C8—C6 | −178.45 (18) | C10—C11—C12—C13 | 1.2 (3) |
| C5—C6—C8—O1 | −129.5 (2) | C15—C11—C12—C13 | −176.7 (2) |
| C1—C6—C8—O1 | 47.3 (3) | C11—C12—C13—C14 | 1.3 (4) |
| C5—C6—C8—N1 | 49.2 (2) | C10—N3—C14—C13 | 1.3 (4) |
| C1—C6—C8—N1 | −133.98 (18) | C12—C13—C14—N3 | −2.8 (4) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2···O1 | 0.86 (2) | 2.04 (2) | 2.697 (2) | 132.2 (18) |
| C15—H15A···N2 | 0.96 | 2.56 | 2.961 | 105 |
| N2—H2···O1i | 0.86 (2) | 2.30 (2) | 3.021 (2) | 142 (2) |
| C13—H13···S1ii | 0.93 | 2.85 | 3.700 | 154 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+3/2, y+1/2, −z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SG2229).
References
- Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
- Bruker (2000). SADABS, SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Nardelli, M. (1995). J. Appl. Cryst.28, 659.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2003). J. Appl. Cryst.36, 7–13.
- Yusof, M. S. M., Ahmad Mushtari, N. & Yamin, B. M. (2007). Acta Cryst. E63, o4709.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808009513/sg2229sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808009513/sg2229Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


