Abstract
Crystals of the title compound, C12H10N4O5, were obtained from a condensation reaction of 2,4-dinitrophenylhydrazine and 2-furyl methyl ketone. The molecule displays a nearly planar structure, and the furan ring is slightly twisted by a dihedral angle of 12.62 (6)° with respect to the phenylhydrazone plane. The face-to-face separation of 3.287 (7) Å between parallel benzene rings of adjacent molecules indicates the existence of π–π stacking between dinitrophenyl rings in the crystal structure.
Related literature
For general background, see: Okabe et al. (1993 ▶); Shan et al. (2003a
▶, 2006 ▶). For related structures, see: Vickery et al. (1985 ▶); Fan et al. (2004 ▶); Shan et al. (2003b
▶).
Experimental
Crystal data
C12H10N4O5
M r = 290.24
Monoclinic,
a = 9.8917 (8) Å
b = 12.8477 (15) Å
c = 10.6549 (12) Å
β = 111.63 (2)°
V = 1258.7 (3) Å3
Z = 4
Mo Kα radiation
μ = 0.12 mm−1
T = 293 (2) K
0.36 × 0.23 × 0.18 mm
Data collection
Rigaku R-AXIS RAPID IP diffractometer
Absorption correction: none
12121 measured reflections
2858 independent reflections
1784 reflections with I > 2σ(I)
R int = 0.026
Refinement
R[F 2 > 2σ(F 2)] = 0.038
wR(F 2) = 0.111
S = 1.03
2858 reflections
192 parameters
H-atom parameters constrained
Δρmax = 0.21 e Å−3
Δρmin = −0.17 e Å−3
Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808015122/om2233sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808015122/om2233Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N3—H3⋯O1 | 0.86 | 1.97 | 2.6063 (15) | 130 |
| C9—H9⋯O4i | 0.93 | 2.41 | 3.334 (2) | 172 |
| C11—H11⋯O2ii | 0.93 | 2.41 | 3.1530 (19) | 137 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
The work was supported by the Natural Science Foundation of Zhejiang Province, China (No. M203027).
supplementary crystallographic information
Comment
As some phenylhydrazone derivatives have shown to be potentially DNA damaging and mutagenic agents (Okabe et al., 1993), a series of new phenylhydrazone derivatives have been synthesized in our laboratory (Shan et al., 2003a; Shan et al., 2006). As part of the ongoing investigation, the title compound has recently been prepared and its crystal structure is reported here.
The molecular structure of the title compound is shown in Fig. 1. The molecule displays an approximately planar structure, the furan ring is slightly twisted with respect to the phenylhydrazone plane with a dihedral angle of 12.62 (6)°. The N4—C7 bond distance (Table 1) indicates a typical C=N double dond. The molecule assumes an E configuration with the phenylhydrazine and furan located on the opposite sides of the C=N bond. An intramolecular hydrogen bond is observed between the N3-imino and the adjacent N1-nitro groups; such a hydrogen bonding is a common feature in o-nitrophenylhydrazine compounds (Vickery et al., 1985; Fan et al., 2004).
A partially overlapped arrangement of parallel benzene rings of adjacent molecules is illustrated in Fig. 2. The face-to-face separation of 3.287 (7) Å strongly indicates the existence of π-π stacking between parallel dinitrophenyl rings of adjacent molecules in the crystal. It agrees with that found in a related dinitrophenylhydrazine compound, isobutylaldehyde 2,4-dinitrophenylhydrazone (Shan et al., 2003b).
The crystal structure also contains intermolecular weak C—H···O hydrogen bonding (Table 2).
Experimental
2,4-Dinitrophenylhydrazine (0.4 g, 2 mmol) was dissolved in ethanol (10 ml), and H2SO4 solution (98%, 0.5 ml) was slowly added to the ethanol solution with stirring. The solution was heated at 333 K for several min until the solution cleared. 2-Furyl methylketone (0.22 g, 2 mmol) was added to the above solution with continuous stirring, and the mixture was refluxed for 30 min. When the solution had cooled to room temperature brown powder crystals appeared. The powder crystals were separated and washed with water three times. Recrystallization from an absolute ethanol solution yielded well shaped single crystals.
Refinement
Methyl H atoms were placed in calculated positions with C—H = 0.96 Å and the torsion angle was refined to fit the electron density, Uiso(H) = 1.5Ueq(C). Other H atoms were placed in calculated positions with C—H = 0.93 and N—H = 0.86 Å, and refined in riding mode, Uiso(H) = 1.2Ueq(C,N).
Figures
Fig. 1.
The molecular structure of the title compound with 30% probability displacement ellipsoids for non-H atoms.
Fig. 2.
A diagram showing the overlapped arrangement of parallel benzene rings of neighboring molecules [symmetry code: (i) 1 - x,1 - y,1 - z].
Crystal data
| C12H10N4O5 | F000 = 600 |
| Mr = 290.24 | Dx = 1.532 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 5266 reflections |
| a = 9.8917 (8) Å | θ = 3.2–26.0º |
| b = 12.8477 (15) Å | µ = 0.12 mm−1 |
| c = 10.6549 (12) Å | T = 293 (2) K |
| β = 111.63 (2)º | Prism, brown |
| V = 1258.7 (3) Å3 | 0.36 × 0.23 × 0.18 mm |
| Z = 4 |
Data collection
| Rigaku R-AXIS RAPID IP diffractometer | 2858 independent reflections |
| Radiation source: fine-focus sealed tube | 1784 reflections with I > 2σ(I) |
| Monochromator: graphite | Rint = 0.026 |
| Detector resolution: 10.00 pixels mm-1 | θmax = 27.4º |
| T = 293(2) K | θmin = 3.2º |
| ω scans | h = −12→12 |
| Absorption correction: none | k = −16→16 |
| 12121 measured reflections | l = −13→13 |
Refinement
| Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| R[F2 > 2σ(F2)] = 0.038 | w = 1/[σ2(Fo2) + (0.0649P)2] where P = (Fo2 + 2Fc2)/3 |
| wR(F2) = 0.111 | (Δ/σ)max < 0.001 |
| S = 1.03 | Δρmax = 0.21 e Å−3 |
| 2858 reflections | Δρmin = −0.17 e Å−3 |
| 192 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0047 (11) |
| Secondary atom site location: difference Fourier map |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.13582 (13) | 0.43547 (8) | 0.14104 (11) | 0.0648 (4) | |
| O2 | 0.15573 (13) | 0.27996 (8) | 0.22020 (12) | 0.0648 (4) | |
| O3 | 0.44159 (13) | 0.19704 (8) | 0.66737 (13) | 0.0660 (4) | |
| O4 | 0.52296 (15) | 0.31707 (10) | 0.81753 (13) | 0.0742 (4) | |
| O5 | 0.09817 (11) | 0.93990 (8) | 0.18361 (12) | 0.0566 (3) | |
| N1 | 0.17859 (13) | 0.37357 (9) | 0.23615 (12) | 0.0452 (3) | |
| N2 | 0.45693 (14) | 0.28930 (10) | 0.70150 (14) | 0.0498 (3) | |
| N3 | 0.21841 (13) | 0.59367 (8) | 0.30483 (12) | 0.0412 (3) | |
| H3 | 0.1757 | 0.5753 | 0.2219 | 0.049* | |
| N4 | 0.22992 (13) | 0.69747 (8) | 0.33900 (12) | 0.0411 (3) | |
| C1 | 0.27421 (13) | 0.52042 (9) | 0.40146 (14) | 0.0349 (3) | |
| C2 | 0.25858 (14) | 0.41229 (10) | 0.37100 (14) | 0.0368 (3) | |
| C3 | 0.31897 (14) | 0.33809 (10) | 0.46968 (15) | 0.0406 (3) | |
| H3A | 0.3085 | 0.2677 | 0.4478 | 0.049* | |
| C4 | 0.39417 (14) | 0.36870 (10) | 0.59975 (15) | 0.0403 (3) | |
| C5 | 0.40955 (15) | 0.47424 (11) | 0.63469 (15) | 0.0412 (3) | |
| H5 | 0.4597 | 0.4940 | 0.7238 | 0.049* | |
| C6 | 0.35072 (14) | 0.54818 (10) | 0.53751 (14) | 0.0393 (3) | |
| H6 | 0.3613 | 0.6182 | 0.5615 | 0.047* | |
| C7 | 0.16518 (14) | 0.76093 (10) | 0.24031 (14) | 0.0395 (3) | |
| C8 | 0.18273 (16) | 0.87045 (10) | 0.27796 (16) | 0.0431 (4) | |
| C9 | 0.26625 (19) | 0.92158 (12) | 0.38905 (18) | 0.0586 (4) | |
| H9 | 0.3329 | 0.8926 | 0.4674 | 0.070* | |
| C10 | 0.2326 (2) | 1.02927 (13) | 0.3632 (2) | 0.0691 (5) | |
| H10 | 0.2734 | 1.0842 | 0.4218 | 0.083* | |
| C11 | 0.1335 (2) | 1.03623 (12) | 0.2414 (2) | 0.0662 (5) | |
| H11 | 0.0926 | 1.0983 | 0.1997 | 0.079* | |
| C12 | 0.07984 (19) | 0.73130 (12) | 0.09826 (17) | 0.0556 (4) | |
| H12A | 0.1447 | 0.7073 | 0.0560 | 0.083* | |
| H12B | 0.0268 | 0.7907 | 0.0502 | 0.083* | |
| H12C | 0.0130 | 0.6767 | 0.0968 | 0.083* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0920 (9) | 0.0420 (6) | 0.0438 (7) | −0.0007 (6) | 0.0055 (6) | −0.0006 (5) |
| O2 | 0.0836 (8) | 0.0323 (6) | 0.0615 (8) | −0.0105 (5) | 0.0068 (6) | −0.0098 (5) |
| O3 | 0.0778 (8) | 0.0408 (6) | 0.0728 (9) | 0.0058 (5) | 0.0200 (7) | 0.0147 (5) |
| O4 | 0.0884 (9) | 0.0708 (8) | 0.0459 (8) | 0.0053 (7) | 0.0041 (7) | 0.0107 (6) |
| O5 | 0.0572 (6) | 0.0371 (6) | 0.0754 (8) | 0.0069 (5) | 0.0242 (6) | 0.0136 (5) |
| N1 | 0.0513 (7) | 0.0333 (6) | 0.0443 (8) | −0.0020 (5) | 0.0096 (6) | −0.0035 (5) |
| N2 | 0.0510 (7) | 0.0468 (8) | 0.0489 (9) | 0.0030 (6) | 0.0151 (6) | 0.0111 (6) |
| N3 | 0.0510 (7) | 0.0272 (5) | 0.0399 (7) | −0.0003 (5) | 0.0103 (5) | −0.0014 (5) |
| N4 | 0.0490 (7) | 0.0263 (6) | 0.0468 (7) | −0.0013 (5) | 0.0164 (6) | −0.0013 (5) |
| C1 | 0.0349 (7) | 0.0296 (6) | 0.0404 (8) | −0.0010 (5) | 0.0142 (6) | −0.0009 (5) |
| C2 | 0.0373 (7) | 0.0305 (6) | 0.0400 (8) | −0.0020 (5) | 0.0112 (6) | −0.0026 (5) |
| C3 | 0.0411 (7) | 0.0297 (6) | 0.0492 (9) | −0.0020 (5) | 0.0147 (7) | 0.0013 (6) |
| C4 | 0.0395 (7) | 0.0372 (7) | 0.0434 (9) | 0.0017 (6) | 0.0146 (6) | 0.0064 (6) |
| C5 | 0.0421 (7) | 0.0439 (8) | 0.0366 (8) | −0.0028 (6) | 0.0132 (6) | −0.0034 (6) |
| C6 | 0.0433 (7) | 0.0316 (7) | 0.0448 (9) | −0.0023 (6) | 0.0181 (6) | −0.0047 (6) |
| C7 | 0.0428 (7) | 0.0343 (7) | 0.0427 (8) | −0.0003 (6) | 0.0171 (6) | 0.0024 (6) |
| C8 | 0.0507 (8) | 0.0319 (7) | 0.0496 (9) | 0.0045 (6) | 0.0220 (7) | 0.0084 (6) |
| C9 | 0.0800 (11) | 0.0390 (8) | 0.0549 (10) | −0.0056 (8) | 0.0227 (9) | −0.0049 (7) |
| C10 | 0.0959 (14) | 0.0354 (8) | 0.0892 (15) | −0.0106 (8) | 0.0495 (13) | −0.0130 (9) |
| C11 | 0.0762 (12) | 0.0289 (8) | 0.1072 (18) | 0.0051 (8) | 0.0499 (13) | 0.0085 (9) |
| C12 | 0.0682 (10) | 0.0446 (8) | 0.0471 (10) | 0.0010 (8) | 0.0133 (8) | 0.0036 (7) |
Geometric parameters (Å, °)
| O1—N1 | 1.2338 (16) | C3—H3A | 0.9300 |
| O2—N1 | 1.2239 (15) | C4—C5 | 1.3995 (19) |
| O3—N2 | 1.2327 (17) | C5—C6 | 1.367 (2) |
| O4—N2 | 1.2194 (18) | C5—H5 | 0.9300 |
| O5—C11 | 1.369 (2) | C6—H6 | 0.9300 |
| O5—C8 | 1.3735 (18) | C7—C8 | 1.4560 (19) |
| N1—C2 | 1.4491 (18) | C7—C12 | 1.485 (2) |
| N2—C4 | 1.4510 (18) | C8—C9 | 1.339 (2) |
| N3—C1 | 1.3533 (17) | C9—C10 | 1.426 (2) |
| N3—N4 | 1.3760 (15) | C9—H9 | 0.9300 |
| N3—H3 | 0.8600 | C10—C11 | 1.309 (3) |
| N4—C7 | 1.2977 (18) | C10—H10 | 0.9300 |
| C1—C6 | 1.4115 (19) | C11—H11 | 0.9300 |
| C1—C2 | 1.4221 (17) | C12—H12A | 0.9600 |
| C2—C3 | 1.3813 (19) | C12—H12B | 0.9600 |
| C3—C4 | 1.367 (2) | C12—H12C | 0.9600 |
| C11—O5—C8 | 105.81 (13) | C4—C5—H5 | 120.1 |
| O2—N1—O1 | 121.97 (13) | C5—C6—C1 | 121.31 (13) |
| O2—N1—C2 | 118.71 (12) | C5—C6—H6 | 119.3 |
| O1—N1—C2 | 119.32 (11) | C1—C6—H6 | 119.3 |
| O4—N2—O3 | 122.83 (14) | N4—C7—C8 | 114.26 (13) |
| O4—N2—C4 | 118.26 (13) | N4—C7—C12 | 126.16 (13) |
| O3—N2—C4 | 118.91 (14) | C8—C7—C12 | 119.58 (12) |
| C1—N3—N4 | 120.13 (12) | C9—C8—O5 | 109.82 (13) |
| C1—N3—H3 | 119.9 | C9—C8—C7 | 133.59 (14) |
| N4—N3—H3 | 119.9 | O5—C8—C7 | 116.59 (13) |
| C7—N4—N3 | 115.25 (12) | C8—C9—C10 | 106.32 (17) |
| N3—C1—C6 | 121.30 (12) | C8—C9—H9 | 126.8 |
| N3—C1—C2 | 121.75 (13) | C10—C9—H9 | 126.8 |
| C6—C1—C2 | 116.95 (12) | C11—C10—C9 | 107.09 (16) |
| C3—C2—C1 | 121.36 (13) | C11—C10—H10 | 126.5 |
| C3—C2—N1 | 116.28 (12) | C9—C10—H10 | 126.5 |
| C1—C2—N1 | 122.37 (12) | C10—C11—O5 | 110.96 (14) |
| C4—C3—C2 | 119.62 (13) | C10—C11—H11 | 124.5 |
| C4—C3—H3A | 120.2 | O5—C11—H11 | 124.5 |
| C2—C3—H3A | 120.2 | C7—C12—H12A | 109.5 |
| C3—C4—C5 | 120.90 (13) | C7—C12—H12B | 109.5 |
| C3—C4—N2 | 118.57 (13) | H12A—C12—H12B | 109.5 |
| C5—C4—N2 | 120.52 (13) | C7—C12—H12C | 109.5 |
| C6—C5—C4 | 119.84 (13) | H12A—C12—H12C | 109.5 |
| C6—C5—H5 | 120.1 | H12B—C12—H12C | 109.5 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N3—H3···O1 | 0.86 | 1.97 | 2.6063 (15) | 130 |
| C9—H9···O4i | 0.93 | 2.41 | 3.334 (2) | 172 |
| C11—H11···O2ii | 0.93 | 2.41 | 3.1530 (19) | 137 |
Symmetry codes: (i) −x+1, y+1/2, −z+3/2; (ii) x, y+1, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: OM2233).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808015122/om2233sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808015122/om2233Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


