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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 May 14;64(Pt 6):o1074. doi: 10.1107/S1600536808013317

(E)-N-(6-Chloro-3-pyridylmeth­yl)-N-ethyl-N′-methyl-2-nitro­ethyl­ene-1,1-diamine

Liang-Zhong Xu a,*, Zhi Yang a, Xu Yi a, Guang-Wei An a
PMCID: PMC2961552  PMID: 21202592

Abstract

In the title compound, C11H15ClN4O2, the amino group is involved in intra- and inter­molecular N—H⋯O hydrogen bonds. The former contributes to the mol­ecular conformation, while the latter link the mol­ecules into centrosymmetric dimers. The crystal structure also exhibits weak inter­molecular C—H⋯O inter­actions.

Related literature

For the properties of neonicotinoid insecticides, see: Wang et al. (2001); Isao et al. (1993). For related crystal structures, see: Jiang et al. (2007); Xia et al. (2007).graphic file with name e-64-o1074-scheme1.jpg

Experimental

Crystal data

  • C11H15ClN4O2

  • M r = 270.72

  • Monoclinic, Inline graphic

  • a = 7.7252 (15) Å

  • b = 7.9281 (16) Å

  • c = 20.787 (4) Å

  • β = 92.34 (3)°

  • V = 1272.0 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.30 mm−1

  • T = 113 (2) K

  • 0.14 × 0.12 × 0.04 mm

Data collection

  • Rigaku Saturn diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) T min = 0.959, T max = 0.988

  • 7120 measured reflections

  • 2238 independent reflections

  • 1970 reflections with I > 2σ(I)

  • R int = 0.031

Refinement

  • R[F 2 > 2σ(F 2)] = 0.033

  • wR(F 2) = 0.089

  • S = 1.05

  • 2238 reflections

  • 165 parameters

  • H-atom parameters constrained

  • Δρmax = 0.33 e Å−3

  • Δρmin = −0.34 e Å−3

Data collection: CrystalClear (Rigaku, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808013317/cv2407sup1.cif

e-64-o1074-sup1.cif (17.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808013317/cv2407Isup2.hkl

e-64-o1074-Isup2.hkl (110KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N3—H3A⋯O1 0.86 2.12 2.6376 (16) 118
N3—H3A⋯O1i 0.86 2.38 3.0778 (17) 138
C6—H6A⋯O1ii 0.97 2.58 3.508 (2) 160
C3—H3⋯O2iii 0.93 2.50 3.1101 (19) 123

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

supplementary crystallographic information

Comment

Nitenpyram is a new chloro-nicotine type insecticide (Wang et al., 2001) possessing a wide spectum of useful properties (Isao et al., 1993). We report here the crystal structure of the title compound (I).

In (I) (Fig. 1), all bond lengths and angles are in agreement with those reported for the related structures (Jiang et al., 2007; Xia et al., 2007). The pyridine ring and plane N2/N3/C9/C11 form a dihedral angle of 48.8 (2)°. The amino group is involved in intra- and intermolecular N-H···O hydrogen bonds (Table 1). The intermolecular N-H···O hydrogen bonds link the molecules into centrosymmetric dimers. The crystal packing exhibits also weak intermolecular C—H···O interactions (Table 1).

Experimental

A solution comprising N-((6-chloropyridin-3-yl)methyl)ethanamine(0.1 mol) in trichloromethane(30 ml) was slowly added from a dropping-funnel to a mixture of 1,1,1-trichloro-2-nitro-ethane(0.15 mol), trichloromethane(30 ml) and an aqueous solution of sodium carbonate(40%, 53 g) in a flask equipped with stirrer and reflux condenser. After the mixture was stirred for 1 h while maintaining the temperature at 273–280k, an aqueous solution of methylamine(30%, 30 g) was then added dropwise, followed by a two hours stirring at room temperature. The reaction mixture were extracted with trichloromethane, the title compound (16.2 g, yield 60%) could be afforded after ethyl oxide was added to the concentration remnants on cooling. The single-crystal suitable for X-ray measurements was obtained by recrystallization from trichloromethane-ethyl acetate(1:1) at room temperature.

Refinement

H atoms were positioned geometrically and allowed to ride on their parent atoms, with N—H and C—H distances of 0.86 and 0.93–0.97 Å, respectively, and with Uiso(H) = 1.2Ueq(C, N) for the aryl, methylene and N H atoms and 1.5Ueq(C) for the methyl H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with the atom-labeling scheme. Displacement ellipsoids are drawn at the 40% probability level.

Crystal data

C11H15ClN4O2 F000 = 568
Mr = 270.72 Dx = 1.414 Mg m3
Monoclinic, P21/n Mo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 3653 reflections
a = 7.7252 (15) Å θ = 2.0–27.9º
b = 7.9281 (16) Å µ = 0.30 mm1
c = 20.787 (4) Å T = 113 (2) K
β = 92.34 (3)º Block, yellow
V = 1272.0 (4) Å3 0.14 × 0.12 × 0.04 mm
Z = 4

Data collection

Rigaku Saturn diffractometer 2238 independent reflections
Radiation source: rotating anode 1970 reflections with I > 2σ(I)
Monochromator: confocal Rint = 0.031
T = 113(2) K θmax = 25.0º
ω scans θmin = 2.8º
Absorption correction: multi-scan(CrystalClear; Rigaku, 2005) h = −9→5
Tmin = 0.959, Tmax = 0.988 k = −8→9
7120 measured reflections l = −24→23

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033 H-atom parameters constrained
wR(F2) = 0.089   w = 1/[σ2(Fo2) + (0.053P)2 + 0.2942P] where P = (Fo2 + 2Fc2)/3
S = 1.05 (Δ/σ)max < 0.001
2238 reflections Δρmax = 0.33 e Å3
165 parameters Δρmin = −0.34 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl1 −0.46834 (6) 0.13093 (5) 0.15973 (2) 0.03277 (16)
O1 0.31814 (14) 1.08651 (13) −0.00180 (6) 0.0256 (3)
O2 0.11880 (15) 1.26510 (13) 0.02461 (6) 0.0297 (3)
N1 −0.37165 (16) 0.43140 (16) 0.19759 (6) 0.0218 (3)
N2 0.10858 (15) 0.74385 (14) 0.12607 (6) 0.0154 (3)
N3 0.34655 (15) 0.80473 (14) 0.06527 (6) 0.0164 (3)
H3A 0.4171 0.8837 0.0555 0.020*
N4 0.19059 (16) 1.12460 (14) 0.03211 (6) 0.0187 (3)
C1 −0.34845 (19) 0.31625 (19) 0.15333 (7) 0.0194 (3)
C2 −0.23838 (19) 0.33022 (19) 0.10271 (8) 0.0193 (3)
H2 −0.2261 0.2429 0.0734 0.023*
C3 −0.14779 (18) 0.47891 (18) 0.09762 (7) 0.0183 (3)
H3 −0.0727 0.4941 0.0642 0.022*
C4 −0.16921 (18) 0.60648 (17) 0.14276 (7) 0.0157 (3)
C5 −0.28034 (19) 0.57502 (19) 0.19164 (7) 0.0193 (3)
H5 −0.2931 0.6584 0.2225 0.023*
C6 −0.07572 (18) 0.77266 (17) 0.13772 (7) 0.0170 (3)
H6A −0.1280 0.8384 0.1027 0.020*
H6B −0.0863 0.8360 0.1773 0.020*
C7 0.20362 (19) 0.64947 (18) 0.17777 (7) 0.0177 (3)
H7A 0.2889 0.5772 0.1586 0.021*
H7B 0.1228 0.5777 0.1996 0.021*
C8 0.2939 (2) 0.7633 (2) 0.22653 (9) 0.0301 (4)
H8A 0.3829 0.8259 0.2062 0.045*
H8B 0.3449 0.6965 0.2608 0.045*
H8C 0.2115 0.8402 0.2436 0.045*
C9 0.19636 (18) 0.85310 (17) 0.08850 (7) 0.0142 (3)
C10 0.4040 (2) 0.63299 (18) 0.05466 (8) 0.0206 (3)
H10A 0.4731 0.5955 0.0913 0.031*
H10B 0.4718 0.6292 0.0170 0.031*
H10C 0.3050 0.5607 0.0486 0.031*
C11 0.12900 (18) 1.01529 (17) 0.07620 (7) 0.0169 (3)
H11 0.0359 1.0503 0.0999 0.020*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl1 0.0374 (3) 0.0288 (2) 0.0319 (3) −0.01993 (18) 0.00009 (19) 0.00218 (17)
O1 0.0213 (6) 0.0257 (6) 0.0307 (7) 0.0037 (5) 0.0121 (5) 0.0098 (5)
O2 0.0367 (7) 0.0148 (5) 0.0384 (8) 0.0088 (5) 0.0118 (6) 0.0096 (5)
N1 0.0195 (6) 0.0264 (7) 0.0195 (7) −0.0078 (6) 0.0008 (5) 0.0030 (6)
N2 0.0126 (6) 0.0143 (6) 0.0191 (7) 0.0006 (5) 0.0006 (5) 0.0041 (5)
N3 0.0137 (6) 0.0119 (6) 0.0241 (7) −0.0011 (5) 0.0041 (5) 0.0007 (5)
N4 0.0191 (7) 0.0145 (6) 0.0226 (7) 0.0014 (5) 0.0033 (5) 0.0023 (5)
C1 0.0171 (7) 0.0202 (7) 0.0203 (8) −0.0049 (6) −0.0052 (6) 0.0054 (6)
C2 0.0197 (7) 0.0172 (7) 0.0208 (8) 0.0025 (6) −0.0012 (6) 0.0005 (6)
C3 0.0149 (7) 0.0202 (8) 0.0199 (8) 0.0017 (6) 0.0028 (6) 0.0032 (6)
C4 0.0115 (7) 0.0170 (7) 0.0183 (8) 0.0018 (6) −0.0023 (6) 0.0040 (6)
C5 0.0179 (7) 0.0218 (7) 0.0181 (8) −0.0025 (6) 0.0003 (6) −0.0006 (6)
C6 0.0147 (7) 0.0154 (7) 0.0211 (8) 0.0012 (6) 0.0033 (6) 0.0022 (6)
C7 0.0171 (7) 0.0176 (7) 0.0183 (8) 0.0002 (6) −0.0006 (6) 0.0053 (6)
C8 0.0348 (9) 0.0279 (9) 0.0267 (10) −0.0077 (7) −0.0094 (7) 0.0053 (7)
C9 0.0141 (7) 0.0134 (7) 0.0148 (8) −0.0016 (6) −0.0018 (6) −0.0010 (5)
C10 0.0200 (8) 0.0165 (7) 0.0252 (9) 0.0052 (6) 0.0026 (7) −0.0012 (6)
C11 0.0163 (7) 0.0150 (7) 0.0197 (8) 0.0005 (6) 0.0056 (6) 0.0008 (6)

Geometric parameters (Å, °)

Cl1—C1 1.7447 (15) C4—C5 1.379 (2)
O1—N4 1.2711 (16) C4—C6 1.508 (2)
O2—N4 1.2512 (16) C5—H5 0.9300
N1—C1 1.314 (2) C6—H6A 0.9700
N1—C5 1.3478 (19) C6—H6B 0.9700
N2—C9 1.3650 (18) C7—C8 1.507 (2)
N2—C6 1.4717 (17) C7—H7A 0.9700
N2—C7 1.4796 (19) C7—H7B 0.9700
N3—C9 1.3313 (18) C8—H8A 0.9600
N3—C10 1.4517 (18) C8—H8B 0.9600
N3—H3A 0.8600 C8—H8C 0.9600
N4—C11 1.3613 (18) C9—C11 1.4066 (19)
C1—C2 1.384 (2) C10—H10A 0.9600
C2—C3 1.377 (2) C10—H10B 0.9600
C2—H2 0.9300 C10—H10C 0.9600
C3—C4 1.394 (2) C11—H11 0.9300
C3—H3 0.9300
C1—N1—C5 115.85 (13) N2—C6—H6B 109.6
C9—N2—C6 120.14 (12) C4—C6—H6B 109.6
C9—N2—C7 119.54 (12) H6A—C6—H6B 108.1
C6—N2—C7 114.44 (11) N2—C7—C8 112.82 (12)
C9—N3—C10 126.98 (12) N2—C7—H7A 109.0
C9—N3—H3A 116.5 C8—C7—H7A 109.0
C10—N3—H3A 116.5 N2—C7—H7B 109.0
O2—N4—O1 119.49 (12) C8—C7—H7B 109.0
O2—N4—C11 119.03 (12) H7A—C7—H7B 107.8
O1—N4—C11 121.48 (12) C7—C8—H8A 109.5
N1—C1—C2 125.63 (13) C7—C8—H8B 109.5
N1—C1—Cl1 116.35 (11) H8A—C8—H8B 109.5
C2—C1—Cl1 118.03 (12) C7—C8—H8C 109.5
C3—C2—C1 117.18 (14) H8A—C8—H8C 109.5
C3—C2—H2 121.4 H8B—C8—H8C 109.5
C1—C2—H2 121.4 N3—C9—N2 119.04 (12)
C2—C3—C4 119.65 (14) N3—C9—C11 121.26 (13)
C2—C3—H3 120.2 N2—C9—C11 119.69 (12)
C4—C3—H3 120.2 N3—C10—H10A 109.5
C5—C4—C3 117.33 (13) N3—C10—H10B 109.5
C5—C4—C6 121.56 (13) H10A—C10—H10B 109.5
C3—C4—C6 121.10 (13) N3—C10—H10C 109.5
N1—C5—C4 124.34 (14) H10A—C10—H10C 109.5
N1—C5—H5 117.8 H10B—C10—H10C 109.5
C4—C5—H5 117.8 N4—C11—C9 124.57 (13)
N2—C6—C4 110.19 (11) N4—C11—H11 117.7
N2—C6—H6A 109.6 C9—C11—H11 117.7
C4—C6—H6A 109.6
C5—N1—C1—C2 0.8 (2) C3—C4—C6—N2 −47.41 (19)
C5—N1—C1—Cl1 −179.06 (11) C9—N2—C7—C8 58.95 (17)
N1—C1—C2—C3 −1.3 (2) C6—N2—C7—C8 −94.11 (15)
Cl1—C1—C2—C3 178.57 (11) C10—N3—C9—N2 23.9 (2)
C1—C2—C3—C4 0.3 (2) C10—N3—C9—C11 −157.47 (15)
C2—C3—C4—C5 1.0 (2) C6—N2—C9—N3 −163.24 (13)
C2—C3—C4—C6 −178.39 (13) C7—N2—C9—N3 45.24 (19)
C1—N1—C5—C4 0.7 (2) C6—N2—C9—C11 18.2 (2)
C3—C4—C5—N1 −1.6 (2) C7—N2—C9—C11 −133.36 (14)
C6—C4—C5—N1 177.82 (13) O2—N4—C11—C9 179.01 (14)
C9—N2—C6—C4 145.80 (13) O1—N4—C11—C9 −0.4 (2)
C7—N2—C6—C4 −61.31 (16) N3—C9—C11—N4 11.8 (2)
C5—C4—C6—N2 133.23 (14) N2—C9—C11—N4 −169.61 (14)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N3—H3A···O1 0.86 2.12 2.6376 (16) 118
N3—H3A···O1i 0.86 2.38 3.0778 (17) 138
C6—H6A···O1ii 0.97 2.58 3.508 (2) 160
C3—H3···O2iii 0.93 2.50 3.1101 (19) 123

Symmetry codes: (i) −x+1, −y+2, −z; (ii) −x, −y+2, −z; (iii) x, y−1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV2407).

References

  1. Isao, M., Koichi, I. & Takanori, T. (1993). J. Pesticide Sci 18, 41–48.
  2. Jiang, H., Yu, C.-X., Tu, S.-J., Wang, X.-S. & Yao, C.-S. (2007). Acta Cryst. E63, o298–o299.
  3. Rigaku (2005). CrystalClear Rigaku Corporation, Tokyo, Japan.
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  5. Wang, J. J., Han, Z. J. & Wang, Y. C. (2001). Zhiwu Baohu Xuebao, 28, 178–182.
  6. Xia, Y., Ding, X.-L., Ge, Y.-Q., Liu, L.-D. & Zhao, B.-X. (2007). Acta Cryst. E63, o394–o395.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808013317/cv2407sup1.cif

e-64-o1074-sup1.cif (17.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808013317/cv2407Isup2.hkl

e-64-o1074-Isup2.hkl (110KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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