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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 May 7;64(Pt 6):m786. doi: 10.1107/S1600536808013007

{2,6-Bis[1-(phenyl­imino)eth­yl]pyridine-κ3 N,N′,N′′}dichloridocobalt(II)

Xiao-Gang Li a, Di-Chang Zhong b, Ren He a,*, Hui-Rui Guo b
PMCID: PMC2961630  PMID: 21202475

Abstract

In the title complex, [CoCl2(C21H19N3)], the CoII atom is coordinated by one pyridine and two imine N atoms and by two chloride anions in a distorted trigonal bipyramidal geometry. The structure exhibits a pseudo-mirror plane through the metal atom, two chloride anions and the pyridine ring. In the crystal structure, the complexes are connected via inter­molecular C—H⋯Cl hydrogen bonding.

Related literature

For related literature on crystal structures of metal complexes of Schiff bases, see: Reardon et al. (2002); Pradhan et al. (2003); Gibson et al. (2001); Trivedi et al. (2007); Mentes et al. (2001); Esteruelas et al. (2003).graphic file with name e-64-0m786-scheme1.jpg

Experimental

Crystal data

  • [CoCl2(C21H19N3)]

  • M r = 443.22

  • Monoclinic, Inline graphic

  • a = 10.4580 (3) Å

  • b = 15.2575 (4) Å

  • c = 13.1339 (3) Å

  • β = 95.825 (10)°

  • V = 2084.86 (9) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 1.09 mm−1

  • T = 273 (2) K

  • 0.36 × 0.30 × 0.28 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: none

  • 11050 measured reflections

  • 3665 independent reflections

  • 2594 reflections with I > 2σ(I)

  • R int = 0.046

Refinement

  • R[F 2 > 2σ(F 2)] = 0.036

  • wR(F 2) = 0.075

  • S = 1.01

  • 3665 reflections

  • 246 parameters

  • H-atom parameters constrained

  • Δρmax = 0.28 e Å−3

  • Δρmin = −0.26 e Å−3

Data collection: SMART (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808013007/nc2100sup1.cif

e-64-0m786-sup1.cif (18.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808013007/nc2100Isup2.hkl

e-64-0m786-Isup2.hkl (179.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected geometric parameters (Å, °).

Co1—N23 2.027 (2)
Co1—N24 2.208 (2)
Co1—N22 2.223 (2)
Co1—Cl2 2.2572 (8)
Co1—Cl1 2.2638 (8)
N23—Co1—N24 75.36 (8)
N23—Co1—N22 75.38 (8)
N24—Co1—N22 150.74 (9)
N23—Co1—Cl2 119.07 (6)
N24—Co1—Cl2 96.11 (6)
N22—Co1—Cl2 98.36 (6)
N23—Co1—Cl1 123.81 (6)
N24—Co1—Cl1 96.23 (6)
N22—Co1—Cl1 99.58 (6)
Cl2—Co1—Cl1 117.03 (3)

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C2—H2⋯Cl2i 0.93 2.67 3.545 (3) 156
C7—H7A⋯Cl1ii 0.96 2.76 3.663 (3) 158
C18—H18⋯Cl2iii 0.93 2.83 3.714 (3) 160

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

supplementary crystallographic information

Comment

Recently, numerous crystal structures of metal-organic complexes with Schiff base ligands derived from 2,6-diacetylpyridine have been reported (Reardon et al., 2002; Esteruelas et al., 2003; Pradhan et al., 2003; Gibson et al., 2002; Trivedi et al., 2007) in last several years. In our ongoing investigations on this topic we report here the crystal structure of the title compound.

In the crystal stucture of the title compound the CoII atom is coordinated by three N atoms from the Schiff base ligand and two Cl atoms within a distorted trigonal-bipyramid geometry (Table 1 and Fig. 1). The pyridyl N atom and the two Cl atoms are located in the equatorial plane and the apical position are occupied by the two imino N atoms.

The molecules are connected by intermolecular nonclassical C—H···Cl hydrogen bonding between the aromatic and methyl H atoms and the Cl atoms (Table 2 and Fig 2).

Experimental

The ligand Plep (2,6-bis[(1-phenylimino)ethyl]pyridine) was prepared in high yield from condensation of two equivalents of aniline with one equivalent of 2,6-diacetylpyridine in methanol according to the literature (Mentes et al., 2001). The title compound was synthesized as follows: To a solution of Plep (1 mmol) in 10 mL methanol, a solution of CoCl2.6H2O (1 mmol) in 10 mL methanol was added dropwise at 333 K. After stirring for half an hour, the mixture was allowed to cool to room temperature and filtered off. On slow evaporation of the solvent from the filtrate at room temperature, red well shaped single crystals of the title compound were obtained in one week.

Refinement

All H atoms were placed in geometrically idealized positions (,ethyl H atoms allowed to rotate but not to tip) and constrained to ride on their parent atoms, with C—H distances of 0.93 Å (0.96 Å for methyl H atoms) Uiso(H) = 1.2Ueq(C) (1.5 for methyl H atoms).

Data collection: SMART (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997a); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997a); molecular graphics: SHELXTL (Sheldrick, 1997b); software used to prepare material for publication: SHELXTL.

Figures

Fig. 1.

Fig. 1.

Crystal structure of the title compound with 30% probability displacement ellipsoids and the atom-labeling scheme.

Fig. 2.

Fig. 2.

Crystal structure of the title compound with C—H···Cl hydrogen bonding shown as dashed lines.

Crystal data

[CoCl2(C21H19N3)] F000 = 908
Mr = 443.22 Dx = 1.412 Mg m3
Monoclinic, P21/n Mo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 1843 reflections
a = 10.4580 (3) Å θ = 2.1–25.0º
b = 15.2575 (4) Å µ = 1.09 mm1
c = 13.1339 (3) Å T = 273 (2) K
β = 95.8250 (10)º Block, red
V = 2084.86 (9) Å3 0.36 × 0.30 × 0.28 mm
Z = 4

Data collection

Bruker SMART CCD area-detector diffractometer 2594 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.046
Monochromator: graphite θmax = 25.0º
T = 273(2) K θmin = 2.1º
φ and ω scans h = −10→12
Absorption correction: none k = −15→18
11050 measured reflections l = −15→15
3665 independent reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036 H-atom parameters constrained
wR(F2) = 0.075   w = 1/[σ2(Fo2) + (0.0286P)2 + 0.0512P] where P = (Fo2 + 2Fc2)/3
S = 1.01 (Δ/σ)max = 0.003
3665 reflections Δρmax = 0.28 e Å3
246 parameters Δρmin = −0.26 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Co1 0.24632 (4) 0.03924 (2) 0.67087 (3) 0.03166 (12)
Cl1 0.09612 (7) 0.14576 (5) 0.67423 (5) 0.0441 (2)
Cl2 0.45297 (7) 0.07827 (5) 0.71366 (6) 0.0448 (2)
N24 0.2555 (2) 0.04147 (15) 0.50369 (15) 0.0316 (5)
N22 0.2133 (2) −0.03183 (16) 0.81359 (15) 0.0343 (6)
C6 0.2297 (2) −0.03113 (19) 0.45798 (19) 0.0301 (6)
N23 0.20616 (19) −0.08547 (15) 0.62497 (16) 0.0316 (5)
C14 0.1919 (3) −0.1139 (2) 0.8020 (2) 0.0353 (7)
C3 0.1514 (3) −0.2543 (2) 0.5634 (2) 0.0436 (8)
H3 0.1323 −0.3115 0.5425 0.052*
C5 0.2025 (2) −0.10652 (18) 0.5251 (2) 0.0308 (6)
C1 0.1845 (2) −0.14705 (19) 0.6945 (2) 0.0331 (7)
C2 0.1571 (3) −0.23215 (19) 0.6658 (2) 0.0412 (7)
H2 0.1426 −0.2742 0.7146 0.049*
C4 0.1742 (3) −0.19112 (19) 0.4923 (2) 0.0387 (7)
H4 0.1705 −0.2052 0.4231 0.046*
C7 0.2247 (3) −0.0470 (2) 0.34516 (19) 0.0423 (8)
H7A 0.1407 −0.0677 0.3200 0.063*
H7B 0.2878 −0.0901 0.3320 0.063*
H7C 0.2424 0.0067 0.3112 0.063*
C16 0.2226 (3) 0.0074 (2) 0.9132 (2) 0.0370 (7)
C21 0.1319 (3) 0.0674 (2) 0.9352 (2) 0.0496 (9)
H21 0.0644 0.0812 0.8862 0.059*
C8 0.2866 (3) 0.11637 (18) 0.44589 (18) 0.0310 (7)
C9 0.4113 (3) 0.1313 (2) 0.4257 (2) 0.0484 (8)
H9 0.4758 0.0919 0.4487 0.058*
C12 0.2231 (3) 0.2498 (2) 0.3586 (2) 0.0487 (8)
H12 0.1595 0.2900 0.3362 0.058*
C13 0.1924 (3) 0.1760 (2) 0.41291 (19) 0.0406 (8)
H13 0.1081 0.1668 0.4271 0.049*
C15 0.1728 (3) −0.1794 (2) 0.8837 (2) 0.0557 (9)
H15A 0.2453 −0.2183 0.8919 0.084*
H15B 0.0961 −0.2126 0.8645 0.084*
H15C 0.1648 −0.1495 0.9470 0.084*
C10 0.4405 (3) 0.2045 (2) 0.3714 (2) 0.0552 (9)
H10 0.5248 0.2140 0.3572 0.066*
C20 0.1406 (3) 0.1075 (2) 1.0304 (2) 0.0615 (10)
H20 0.0791 0.1485 1.0448 0.074*
C18 0.3299 (4) 0.0281 (2) 1.0814 (2) 0.0651 (11)
H18 0.3971 0.0145 1.1307 0.078*
C11 0.3473 (3) 0.2633 (2) 0.3383 (2) 0.0505 (9)
H11 0.3681 0.3126 0.3018 0.061*
C17 0.3232 (3) −0.0119 (2) 0.9863 (2) 0.0546 (9)
H17 0.3862 −0.0516 0.9716 0.065*
C19 0.2392 (4) 0.0873 (3) 1.1032 (2) 0.0630 (10)
H19 0.2442 0.1138 1.1672 0.076*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Co1 0.0368 (2) 0.0268 (2) 0.0312 (2) −0.00071 (18) 0.00279 (16) 0.00155 (18)
Cl1 0.0371 (4) 0.0479 (5) 0.0480 (4) 0.0097 (4) 0.0080 (3) 0.0079 (4)
Cl2 0.0348 (4) 0.0449 (5) 0.0538 (5) 0.0047 (4) 0.0005 (3) −0.0052 (4)
N24 0.0375 (14) 0.0279 (14) 0.0297 (12) −0.0017 (11) 0.0045 (10) 0.0018 (11)
N22 0.0395 (14) 0.0349 (16) 0.0289 (13) 0.0041 (12) 0.0053 (10) 0.0033 (11)
C6 0.0260 (15) 0.0336 (18) 0.0310 (15) 0.0001 (13) 0.0042 (12) 0.0003 (14)
N23 0.0330 (13) 0.0288 (14) 0.0331 (13) 0.0000 (11) 0.0040 (10) 0.0038 (11)
C14 0.0356 (17) 0.0346 (19) 0.0364 (16) 0.0044 (14) 0.0070 (13) 0.0094 (14)
C3 0.0452 (19) 0.0274 (18) 0.057 (2) −0.0019 (14) 0.0012 (16) −0.0011 (16)
C5 0.0261 (15) 0.0296 (17) 0.0365 (16) −0.0010 (13) 0.0017 (12) −0.0026 (13)
C1 0.0316 (16) 0.0270 (18) 0.0409 (17) 0.0028 (13) 0.0054 (13) 0.0065 (14)
C2 0.0419 (19) 0.0287 (19) 0.0535 (19) 0.0042 (14) 0.0065 (15) 0.0129 (15)
C4 0.0373 (17) 0.037 (2) 0.0413 (17) 0.0034 (14) 0.0000 (14) −0.0058 (15)
C7 0.052 (2) 0.042 (2) 0.0339 (16) −0.0104 (15) 0.0106 (14) −0.0066 (14)
C16 0.0446 (18) 0.0403 (19) 0.0274 (15) −0.0006 (15) 0.0099 (14) 0.0070 (14)
C21 0.047 (2) 0.059 (2) 0.0435 (18) 0.0041 (17) 0.0103 (15) −0.0010 (17)
C8 0.0398 (17) 0.0307 (17) 0.0223 (14) −0.0041 (14) 0.0025 (12) 0.0012 (13)
C9 0.0406 (19) 0.048 (2) 0.057 (2) 0.0016 (16) 0.0094 (16) 0.0159 (17)
C12 0.062 (2) 0.042 (2) 0.0404 (18) 0.0053 (17) −0.0005 (16) 0.0130 (16)
C13 0.0392 (18) 0.044 (2) 0.0393 (17) 0.0009 (15) 0.0049 (14) 0.0096 (15)
C15 0.071 (2) 0.051 (2) 0.0494 (19) 0.0050 (18) 0.0240 (17) 0.0184 (17)
C10 0.049 (2) 0.058 (3) 0.060 (2) −0.0134 (18) 0.0118 (17) 0.0200 (19)
C20 0.068 (2) 0.067 (3) 0.054 (2) 0.003 (2) 0.0279 (19) −0.008 (2)
C18 0.087 (3) 0.069 (3) 0.0357 (19) 0.008 (2) −0.0104 (19) 0.0108 (18)
C11 0.071 (2) 0.045 (2) 0.0363 (17) −0.0114 (19) 0.0070 (17) 0.0135 (16)
C17 0.069 (2) 0.053 (2) 0.0396 (19) 0.0147 (18) −0.0019 (17) 0.0086 (17)
C19 0.095 (3) 0.066 (3) 0.0295 (18) −0.008 (2) 0.0150 (19) 0.0039 (18)

Geometric parameters (Å, °)

Co1—N23 2.027 (2) C16—C21 1.369 (4)
Co1—N24 2.208 (2) C16—C17 1.382 (4)
Co1—N22 2.223 (2) C21—C20 1.387 (4)
Co1—Cl2 2.2572 (8) C21—H21 0.9300
Co1—Cl1 2.2638 (8) C8—C9 1.376 (4)
N24—C6 1.276 (3) C8—C13 1.378 (4)
N24—C8 1.428 (3) C9—C10 1.377 (4)
N22—C14 1.278 (3) C9—H9 0.9300
N22—C16 1.434 (3) C12—C11 1.368 (4)
C6—C5 1.495 (4) C12—C13 1.388 (4)
C6—C7 1.497 (3) C12—H12 0.9300
N23—C1 1.345 (3) C13—H13 0.9300
N23—C5 1.347 (3) C15—H15A 0.9600
C14—C1 1.495 (4) C15—H15B 0.9600
C14—C15 1.495 (4) C15—H15C 0.9600
C3—C4 1.380 (4) C10—C11 1.363 (4)
C3—C2 1.382 (4) C10—H10 0.9300
C3—H3 0.9300 C20—C19 1.368 (4)
C5—C4 1.384 (4) C20—H20 0.9300
C1—C2 1.374 (4) C18—C19 1.361 (5)
C2—H2 0.9300 C18—C17 1.386 (4)
C4—H4 0.9300 C18—H18 0.9300
C7—H7A 0.9600 C11—H11 0.9300
C7—H7B 0.9600 C17—H17 0.9300
C7—H7C 0.9600 C19—H19 0.9300
N23—Co1—N24 75.36 (8) H7A—C7—H7C 109.5
N23—Co1—N22 75.38 (8) H7B—C7—H7C 109.5
N24—Co1—N22 150.74 (9) C21—C16—C17 119.4 (3)
N23—Co1—Cl2 119.07 (6) C21—C16—N22 119.2 (3)
N24—Co1—Cl2 96.11 (6) C17—C16—N22 121.4 (3)
N22—Co1—Cl2 98.36 (6) C16—C21—C20 120.1 (3)
N23—Co1—Cl1 123.81 (6) C16—C21—H21 120.0
N24—Co1—Cl1 96.23 (6) C20—C21—H21 120.0
N22—Co1—Cl1 99.58 (6) C9—C8—C13 119.4 (3)
Cl2—Co1—Cl1 117.03 (3) C9—C8—N24 120.4 (3)
C6—N24—C8 119.6 (2) C13—C8—N24 120.1 (2)
C6—N24—Co1 115.23 (18) C10—C9—C8 119.9 (3)
C8—N24—Co1 125.20 (17) C10—C9—H9 120.0
C14—N22—C16 120.8 (2) C8—C9—H9 120.0
C14—N22—Co1 114.70 (18) C11—C12—C13 119.7 (3)
C16—N22—Co1 124.34 (18) C11—C12—H12 120.1
N24—C6—C5 115.7 (2) C13—C12—H12 120.1
N24—C6—C7 126.2 (3) C8—C13—C12 120.2 (3)
C5—C6—C7 118.1 (2) C8—C13—H13 119.9
C1—N23—C5 120.3 (2) C12—C13—H13 119.9
C1—N23—Co1 119.86 (18) C14—C15—H15A 109.5
C5—N23—Co1 119.87 (18) C14—C15—H15B 109.5
N22—C14—C1 115.8 (2) H15A—C15—H15B 109.5
N22—C14—C15 127.2 (3) C14—C15—H15C 109.5
C1—C14—C15 117.0 (3) H15A—C15—H15C 109.5
C4—C3—C2 119.6 (3) H15B—C15—H15C 109.5
C4—C3—H3 120.2 C11—C10—C9 120.7 (3)
C2—C3—H3 120.2 C11—C10—H10 119.7
N23—C5—C4 120.7 (3) C9—C10—H10 119.7
N23—C5—C6 113.7 (2) C19—C20—C21 120.4 (3)
C4—C5—C6 125.5 (3) C19—C20—H20 119.8
N23—C1—C2 121.2 (3) C21—C20—H20 119.8
N23—C1—C14 114.1 (3) C19—C18—C17 120.6 (3)
C2—C1—C14 124.6 (3) C19—C18—H18 119.7
C1—C2—C3 119.0 (3) C17—C18—H18 119.7
C1—C2—H2 120.5 C10—C11—C12 120.1 (3)
C3—C2—H2 120.5 C10—C11—H11 120.0
C3—C4—C5 119.1 (3) C12—C11—H11 120.0
C3—C4—H4 120.4 C16—C17—C18 119.8 (3)
C5—C4—H4 120.4 C16—C17—H17 120.1
C6—C7—H7A 109.5 C18—C17—H17 120.1
C6—C7—H7B 109.5 C18—C19—C20 119.7 (3)
H7A—C7—H7B 109.5 C18—C19—H19 120.2
C6—C7—H7C 109.5 C20—C19—H19 120.2

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C2—H2···Cl2i 0.93 2.67 3.545 (3) 156
C7—H7A···Cl1ii 0.96 2.76 3.663 (3) 158
C18—H18···Cl2iii 0.93 2.83 3.714 (3) 160

Symmetry codes: (i) −x+1/2, y−1/2, −z+3/2; (ii) −x, −y, −z+1; (iii) −x+1, −y, −z+2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: NC2100).

References

  1. Bruker (2004). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Esteruelas, M. A., López, A. M., Méndez, L., Olivá, M. & Ońate, E. (2003). Organometallics, 22, 395–406.
  3. Gibson, V. C., Humphries, M. J., Tellmann, K. P., Wass, D. F., White, A. J. P. & Williams, D. J. (2001). Chem. Commun.21, 2252–2253. [DOI] [PubMed]
  4. Mentes, A., Fawcett, J. & Kemmitt, R. D. W. (2001). Acta Cryst. E57, o424–o425.
  5. Pradhan, R., Desplanches, C., Guionneau, P. & Sutter, J.-P. (2003). Inorg. Chem.42, 6607–6609. [DOI] [PubMed]
  6. Reardon, D., Aharonian, G., Gambarotta, S. & Yap, G. P. A. (2002). Organometallics, 21, 786–788.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  8. Trivedi, M., Pandey, D. S. & Xu, Q. (2007). Inorg. Chim. Acta, 360, 2492–2498.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808013007/nc2100sup1.cif

e-64-0m786-sup1.cif (18.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808013007/nc2100Isup2.hkl

e-64-0m786-Isup2.hkl (179.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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