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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Jun 7;64(Pt 7):o1211. doi: 10.1107/S1600536808016449

t-3-Benzyl-r-2,c-6-bis­(4-methoxy­phen­yl)piperidin-4-one oxime

J Jayabharathi a, A Thangamani a, S Balamurugan b, A Thiruvalluvar b,*, A Linden c
PMCID: PMC2961741  PMID: 21202850

Abstract

In the title mol­ecule, C26H28N2O3, the piperidine ring adopts a chair conformation. The two methoxy­phenyl groups attached to the piperidine ring at positions 2 and 6 have equatorial orientations, and make a dihedral angle of 80.72 (15)°. The benzyl group at position 3 has an equatorial orientation. The oxime group at position 4 has a bi­sectional orientation. The ring of the benzyl group makes dihedral angles of 64.71 (16) and 84.79 (17)° with the two benzene rings. Mol­ecules are linked by inter­molecular N—H⋯O, O—H⋯N and C—H⋯O hydrogen bonds, and C—H⋯π inter­actions. There is also a C—H⋯O intra­molecular inter­action.

Related literature

For related literature, see: Jayabharathi et al. (2007); Thiruvalluvar et al. (2007).graphic file with name e-64-o1211-scheme1.jpg

Experimental

Crystal data

  • C26H28N2O3

  • M r = 416.50

  • Orthorhombic, Inline graphic

  • a = 10.2472 (4) Å

  • b = 11.2723 (4) Å

  • c = 38.4188 (15) Å

  • V = 4437.7 (3) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 160 (1) K

  • 0.25 × 0.13 × 0.10 mm

Data collection

  • Nonius KappaCCD area-detector diffractometer

  • Absorption correction: none

  • 36542 measured reflections

  • 3910 independent reflections

  • 2305 reflections with I > 2σ(I)

  • R int = 0.092

Refinement

  • R[F 2 > 2σ(F 2)] = 0.070

  • wR(F 2) = 0.211

  • S = 1.08

  • 3910 reflections

  • 286 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.88 e Å−3

  • Δρmin = −0.75 e Å−3

Data collection: COLLECT (Nonius, 2000); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN and SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2003).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808016449/wn2266sup1.cif

e-64-o1211-sup1.cif (29.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808016449/wn2266Isup2.hkl

e-64-o1211-Isup2.hkl (187.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 and Cg2 are the centroids of rings C31–C36 and C21–C26, respectively.

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯O6i 0.97 (3) 2.52 (3) 3.348 (3) 144 (2)
O4—H4⋯N1ii 0.84 2.01 2.818 (3) 160
C5—H5A⋯O4 0.99 2.27 2.705 (4) 105
C65—H65⋯O4iii 0.95 2.43 3.334 (4) 158
C12—H12BCg1iv 0.98 2.89 3.314 (4) 107
C16—H16ACg2i 0.98 2.65 3.598 (4) 162

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

AT thanks the UGC, India, for the award of a Minor Research Project [file No. MRP-2355/06 (UGC-SERO), link No. 2355, 10/01/2007].

supplementary crystallographic information

Comment

In a wide research program toward new and efficient antimicrobial agents, a series of t3-benzyl-r2,c6-diarylpiperidin-4-ones have been synthesized and tested for their in vitro antibacterial and antifungal activities (Jayabharathi et al., 2007). Thiruvalluvar et al. (2007) have reported the crystal structure of t3-benzyl-1-formyl-r2,c-6-diphenylpiperidin-4-one, in which the piperidine ring is in a distorted boat form.

In the title compound, (Fig. 1), the piperidine ring adopts a chair conformation. The two methoxyphenyl groups attached to the piperidine ring at positions 2 and 6 have equatorial orientations, and make a dihedral angle of 80.72 (15)°. The benzyl group at position 3 has an equatorial orientation. The oxime group at position 4 has a bisectional orientation. The phenyl ring of the benzyl group makes a dihedral angle of 64.71 (16)° with the benzene ring at C2, and 84.79 (17)° with the benzene ring at C6. Molecules are linked by intermolecular N1—H1···O6, O4—H4···N1 and C65—H65···O4 hydrogen bonds (Fig. 2). There are C12—H12B···π (-1 + x, y, z) interactions involving the phenyl ring at C13 and C16—H16A···π (1 - x, 1 - y, -z) interactions involving the benzene ring at C2. There is also a C5—H5A···O4 intramolecular interaction.

Experimental

The title compound was prepared according to the literature procedure (Jayabharathi et al., 2007). t3-Benzyl-r2,c6-bis(p-methoxyphenyl)piperidin-4-one (ca 0.05 mol, 20 g) and sodium acetate trihydrate (0.15 mol, 20.41 g) were dissolved in boiling ethanol and hydroxylamine hydrochloride (0.06 mol, 4.17 g) was added. The mixture was heated to 313 K and stirred for 3-4 h. It was allowed to stand overnight and then poured into crushed ice. The separated solid was filtered off and recrystallized from ethanol. The yield of the isolated pure product was 16 g (80%).

Refinement

The H atom bonded to N1 was located in a difference Fourier map and refined isotropically to an N—H bond length of 0.97 (3) Å. The remaining H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.95–1.00 Å and O—H = 0.84 Å; Uiso(H) = xUeq(carrier atom), where x = 1.5 for methyl and O, 1.2 for all others.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, showing the atom-numbering scheme and displacement ellipsoids drawn at the 50% probability level. H atoms have been omitted for clarity.

Fig. 2.

Fig. 2.

The molecular packing of the title compound, viewed down the a axis. Dashed lines indicate hydrogen bonds. H atoms not involved in hydrogen bonding have been omitted.

Crystal data

C26H28N2O3 Dx = 1.247 Mg m3
Mr = 416.50 Melting point: 460 K
Orthorhombic, Pbca Mo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ac 2ab Cell parameters from 4402 reflections
a = 10.2472 (4) Å θ = 2.0–25.0º
b = 11.2723 (4) Å µ = 0.08 mm1
c = 38.4188 (15) Å T = 160 (1) K
V = 4437.7 (3) Å3 Tablet, colourless
Z = 8 0.25 × 0.13 × 0.10 mm
F000 = 1776

Data collection

Nonius KappaCCD area-detector diffractometer 3910 independent reflections
Radiation source: Nonius FR590 sealed tube generator 2305 reflections with I > 2σ(I)
Monochromator: horizontally mounted graphite crystal Rint = 0.092
Detector resolution: 9 pixels mm-1 θmax = 25.0º
T = 160(1) K θmin = 3.1º
φ and ω scans with κ offsets h = −12→12
Absorption correction: none k = −13→13
36542 measured reflections l = −45→45

Refinement

Refinement on F2 Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: full H atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.070   w = 1/[σ2(Fo2) + (0.1121P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.211 (Δ/σ)max < 0.001
S = 1.08 Δρmax = 0.88 e Å3
3910 reflections Δρmin = −0.75 e Å3
286 parameters Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.036 (3)
Secondary atom site location: difference Fourier map

Special details

Experimental. Solvent used: Ethanol Cooling Device: Oxford Cryosystems Cryostream 700 Crystal mount: glued on a glass fibre Mosaicity (°.): 0.618 (1) Frames collected: 629 Seconds exposure per frame: 35 Degrees rotation per frame: 1.0 Crystal-Detector distance (mm): 57.3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O2 0.0668 (2) 0.34156 (19) 0.18566 (6) 0.0420 (8)
O4 0.9150 (2) 0.03452 (19) 0.09433 (6) 0.0386 (8)
O6 0.7048 (2) 0.5478 (2) −0.05739 (5) 0.0443 (9)
N1 0.5498 (3) 0.2892 (2) 0.08373 (6) 0.0311 (9)
N4 0.8055 (2) 0.0468 (2) 0.11664 (6) 0.0335 (9)
C2 0.5128 (3) 0.1965 (3) 0.10941 (8) 0.0322 (11)
C3 0.6286 (3) 0.1719 (3) 0.13407 (8) 0.0301 (10)
C4 0.7480 (3) 0.1470 (3) 0.11248 (8) 0.0315 (11)
C5 0.7802 (3) 0.2386 (3) 0.08540 (8) 0.0354 (11)
C6 0.6613 (3) 0.2506 (3) 0.06163 (8) 0.0332 (11)
C12 −0.0455 (3) 0.2668 (3) 0.18763 (10) 0.0550 (16)
C13 0.5957 (3) 0.0740 (3) 0.16052 (8) 0.0356 (11)
C16 0.8212 (3) 0.6119 (3) −0.06432 (9) 0.0533 (14)
C21 0.3912 (3) 0.2353 (3) 0.12845 (7) 0.0292 (10)
C22 0.3900 (3) 0.3387 (3) 0.14823 (8) 0.0339 (11)
C23 0.2808 (3) 0.3721 (3) 0.16668 (8) 0.0355 (11)
C24 0.1683 (3) 0.3020 (3) 0.16566 (8) 0.0338 (11)
C25 0.1667 (3) 0.1996 (3) 0.14565 (8) 0.0367 (12)
C26 0.2785 (3) 0.1679 (3) 0.12733 (8) 0.0357 (11)
C31 0.6756 (3) 0.0789 (3) 0.19370 (8) 0.0341 (11)
C32 0.6473 (3) 0.1655 (3) 0.21837 (8) 0.0433 (12)
C33 0.7156 (4) 0.1699 (4) 0.24939 (10) 0.0553 (16)
C34 0.8112 (4) 0.0882 (4) 0.25647 (10) 0.0570 (16)
C35 0.8412 (4) 0.0025 (3) 0.23256 (10) 0.0537 (14)
C36 0.7748 (3) −0.0020 (3) 0.20113 (9) 0.0433 (12)
C61 0.6775 (3) 0.3337 (3) 0.03083 (8) 0.0323 (11)
C62 0.7835 (3) 0.4086 (3) 0.02694 (8) 0.0413 (12)
C63 0.7969 (3) 0.4812 (3) −0.00223 (8) 0.0413 (12)
C64 0.7021 (3) 0.4801 (3) −0.02775 (8) 0.0350 (11)
C65 0.5951 (3) 0.4067 (3) −0.02416 (8) 0.0420 (12)
C66 0.5834 (3) 0.3338 (3) 0.00450 (8) 0.0377 (12)
H1 0.473 (3) 0.304 (2) 0.0698 (8) 0.030 (8)*
H2 0.49258 0.12179 0.09644 0.0385*
H3 0.64551 0.24632 0.14749 0.0362*
H4 0.94084 −0.03620 0.09464 0.0578*
H5A 0.85738 0.21356 0.07175 0.0422*
H5B 0.79998 0.31560 0.09663 0.0422*
H6 0.64031 0.17003 0.05231 0.0397*
H12A −0.11135 0.30392 0.20258 0.0825*
H12B −0.02061 0.18972 0.19741 0.0825*
H12C −0.08165 0.25535 0.16425 0.0825*
H13A 0.50211 0.08010 0.16667 0.0426*
H13B 0.60941 −0.00410 0.14934 0.0426*
H16A 0.81134 0.65636 −0.08607 0.0794*
H16B 0.89431 0.55628 −0.06650 0.0794*
H16C 0.83840 0.66712 −0.04517 0.0794*
H22 0.46583 0.38715 0.14903 0.0407*
H23 0.28182 0.44291 0.18010 0.0423*
H25 0.09043 0.15182 0.14448 0.0437*
H26 0.27738 0.09781 0.11362 0.0430*
H32 0.58053 0.22197 0.21388 0.0523*
H33 0.69611 0.23001 0.26593 0.0666*
H34 0.85656 0.09114 0.27801 0.0684*
H35 0.90752 −0.05401 0.23749 0.0643*
H36 0.79716 −0.06079 0.18445 0.0518*
H62 0.84854 0.41066 0.04454 0.0494*
H63 0.87098 0.53122 −0.00453 0.0494*
H65 0.52922 0.40631 −0.04155 0.0504*
H66 0.50995 0.28279 0.00639 0.0456*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O2 0.0306 (14) 0.0431 (15) 0.0524 (15) 0.0035 (11) 0.0109 (11) 0.0070 (11)
O4 0.0371 (14) 0.0361 (14) 0.0425 (14) 0.0086 (11) 0.0105 (11) 0.0036 (11)
O6 0.0489 (16) 0.0493 (15) 0.0346 (14) −0.0048 (12) −0.0022 (11) 0.0123 (11)
N1 0.0307 (16) 0.0346 (16) 0.0281 (15) 0.0018 (13) 0.0001 (13) 0.0027 (12)
N4 0.0346 (16) 0.0354 (16) 0.0305 (15) 0.0030 (13) 0.0040 (12) −0.0005 (12)
C2 0.037 (2) 0.0283 (18) 0.0314 (18) −0.0022 (15) 0.0047 (15) 0.0008 (14)
C3 0.0315 (18) 0.0288 (18) 0.0301 (17) −0.0003 (14) 0.0031 (15) 0.0009 (14)
C4 0.0330 (19) 0.033 (2) 0.0284 (18) 0.0013 (16) 0.0000 (14) −0.0007 (15)
C5 0.033 (2) 0.039 (2) 0.0341 (19) 0.0052 (16) 0.0058 (15) 0.0046 (16)
C6 0.039 (2) 0.0301 (18) 0.0306 (18) 0.0007 (15) 0.0037 (16) −0.0001 (14)
C12 0.036 (2) 0.060 (3) 0.069 (3) −0.002 (2) 0.0122 (19) 0.013 (2)
C13 0.036 (2) 0.0353 (19) 0.0354 (18) 0.0010 (15) 0.0039 (15) 0.0018 (16)
C16 0.060 (3) 0.058 (2) 0.042 (2) −0.006 (2) 0.0018 (19) 0.0152 (19)
C21 0.0304 (19) 0.0284 (18) 0.0288 (17) −0.0007 (15) 0.0001 (14) 0.0028 (14)
C22 0.0282 (19) 0.0326 (19) 0.041 (2) −0.0019 (15) 0.0017 (16) 0.0013 (16)
C23 0.038 (2) 0.0306 (18) 0.038 (2) 0.0013 (17) 0.0023 (16) 0.0003 (15)
C24 0.030 (2) 0.036 (2) 0.0353 (19) 0.0026 (16) 0.0013 (15) 0.0091 (16)
C25 0.033 (2) 0.034 (2) 0.043 (2) −0.0048 (16) 0.0005 (16) 0.0077 (16)
C26 0.040 (2) 0.0319 (19) 0.0353 (19) −0.0023 (16) −0.0020 (16) 0.0001 (15)
C31 0.0357 (19) 0.037 (2) 0.0297 (18) −0.0054 (17) 0.0040 (15) 0.0056 (16)
C32 0.042 (2) 0.053 (2) 0.035 (2) −0.0030 (18) 0.0065 (17) −0.0007 (18)
C33 0.059 (3) 0.071 (3) 0.036 (2) −0.017 (2) 0.009 (2) −0.007 (2)
C34 0.058 (3) 0.071 (3) 0.042 (2) −0.025 (2) −0.010 (2) 0.014 (2)
C35 0.050 (2) 0.050 (2) 0.061 (3) −0.005 (2) −0.014 (2) 0.021 (2)
C36 0.047 (2) 0.039 (2) 0.044 (2) −0.0003 (18) 0.0009 (18) 0.0073 (17)
C61 0.0350 (19) 0.0334 (19) 0.0286 (18) 0.0013 (16) 0.0039 (15) −0.0022 (14)
C62 0.041 (2) 0.049 (2) 0.034 (2) −0.0036 (18) −0.0036 (16) 0.0096 (17)
C63 0.042 (2) 0.044 (2) 0.038 (2) −0.0094 (17) 0.0002 (17) 0.0078 (17)
C64 0.042 (2) 0.036 (2) 0.0270 (19) 0.0054 (16) 0.0016 (16) 0.0046 (15)
C65 0.045 (2) 0.046 (2) 0.035 (2) −0.0027 (18) −0.0090 (17) 0.0028 (17)
C66 0.041 (2) 0.036 (2) 0.036 (2) −0.0047 (16) −0.0010 (16) 0.0016 (16)

Geometric parameters (Å, °)

O2—C12 1.428 (4) C61—C62 1.384 (5)
O2—C24 1.368 (4) C62—C63 1.395 (5)
O4—N4 1.419 (3) C63—C64 1.380 (4)
O6—C16 1.420 (4) C64—C65 1.381 (5)
O6—C64 1.371 (4) C65—C66 1.379 (5)
O4—H4 0.8400 C2—H2 1.0000
N1—C6 1.489 (4) C3—H3 1.0000
N1—C2 1.486 (4) C5—H5A 0.9900
N4—C4 1.284 (4) C5—H5B 0.9900
N1—H1 0.97 (3) C6—H6 1.0000
C2—C3 1.544 (4) C12—H12A 0.9800
C2—C21 1.510 (4) C12—H12B 0.9800
C3—C13 1.538 (5) C12—H12C 0.9800
C3—C4 1.505 (4) C13—H13A 0.9900
C4—C5 1.503 (5) C13—H13B 0.9900
C5—C6 1.529 (4) C16—H16A 0.9800
C6—C61 1.518 (5) C16—H16B 0.9800
C13—C31 1.516 (4) C16—H16C 0.9800
C21—C22 1.392 (5) C22—H22 0.9500
C21—C26 1.383 (4) C23—H23 0.9500
C22—C23 1.377 (4) C25—H25 0.9500
C23—C24 1.398 (4) C26—H26 0.9500
C24—C25 1.387 (5) C32—H32 0.9500
C25—C26 1.391 (4) C33—H33 0.9500
C31—C36 1.395 (5) C34—H34 0.9500
C31—C32 1.391 (5) C35—H35 0.9500
C32—C33 1.383 (5) C36—H36 0.9500
C33—C34 1.372 (6) C62—H62 0.9500
C34—C35 1.368 (6) C63—H63 0.9500
C35—C36 1.387 (5) C65—H65 0.9500
C61—C66 1.398 (4) C66—H66 0.9500
O2···C13i 3.251 (4) H3···C32 2.8700
O4···N1ii 2.818 (3) H3···H22 2.4300
O4···C65iii 3.334 (4) H4···N1ii 2.0100
O2···H13Bi 2.8700 H4···C6ii 2.9100
O2···H33iv 2.6100 H4···C22ii 3.0400
O2···H13Ai 2.8700 H4···H1ii 2.2200
O4···H65iii 2.4300 H4···H22ii 2.4600
O4···H5A 2.2700 H5A···O4 2.2700
O6···H26iii 2.8100 H5A···C62 2.8900
O6···H1v 2.52 (3) H5A···H62 2.4600
N1···O4vi 2.818 (3) H5A···H65iii 2.5000
N4···C31 3.266 (4) H5B···C62 2.8800
N4···C36 3.307 (4) H5B···H62 2.3200
N1···H4vi 2.0100 H5B···N4vi 2.9200
N1···H22 2.8700 H6···H2 2.3400
N4···H13B 2.4400 H6···H66 2.5500
N4···H36 2.8700 H6···C63ii 3.0600
N4···H5Bii 2.9200 H12A···C32vii 2.9900
C12···C36vii 3.583 (5) H12A···C33vii 2.9400
C12···C31vii 3.565 (5) H12A···C36i 2.7600
C12···C32vii 3.551 (4) H12A···H36i 2.5400
C12···C36i 3.547 (5) H12B···C25 2.7700
C12···C33vii 3.580 (5) H12B···C34vii 3.0700
C13···O2viii 3.251 (4) H12B···C35vii 2.8800
C31···C12ix 3.565 (5) H12B···C36vii 3.0100
C31···N4 3.266 (4) H12B···H25 2.3700
C32···C12ix 3.551 (4) H12C···C4vii 2.9100
C33···C12ix 3.580 (5) H12C···C25 2.7200
C36···C12ix 3.583 (5) H12C···H25 2.2500
C36···C12viii 3.547 (5) H13A···C21 2.5500
C36···N4 3.307 (4) H13A···C26 2.9200
C65···O4x 3.334 (4) H13A···H32 2.5500
C65···C66v 3.532 (5) H13A···H34iv 2.6000
C65···C65v 3.416 (5) H13A···O2viii 2.8700
C66···C65v 3.532 (5) H13B···N4 2.4400
C3···H22 3.0000 H13B···H36 2.4400
C4···H12Cix 2.9100 H13B···O2viii 2.8700
C5···H62 2.5900 H13B···C12viii 3.0400
C6···H4vi 2.9100 H16A···C21v 2.9100
C12···H33iv 3.0800 H16A···C25v 2.8200
C12···H13Bi 3.0400 H16A···C26v 2.7000
C12···H25 2.5200 H16B···C63 2.7900
C16···H26iii 3.0600 H16B···H63 2.4100
C16···H63 2.5200 H16B···H2iii 2.5200
C21···H13A 2.5500 H16C···C63 2.7000
C21···H16Av 2.9100 H16C···H63 2.2100
C22···H3 2.8200 H16C···C65vi 2.9000
C22···H4vi 3.0400 H16C···C66vi 2.8000
C24···H33iv 2.7700 H22···N1 2.8700
C25···H16Av 2.8200 H22···C3 3.0000
C25···H12C 2.7200 H22···H3 2.4300
C25···H12B 2.7700 H22···H4vi 2.4600
C26···H13A 2.9200 H23···C34xii 3.0900
C26···H16Av 2.7000 H25···C12 2.5200
C32···H34iv 3.1000 H25···H12B 2.3700
C32···H3 2.8700 H25···H12C 2.2500
C32···H12Aix 2.9900 H26···H2 2.3200
C33···H12Aix 2.9400 H26···O6x 2.8100
C34···H12Bix 3.0700 H26···C16x 3.0600
C34···H23xi 3.0900 H32···H13A 2.5500
C35···H12Bix 2.8800 H33···O2xiii 2.6100
C36···H12Bix 3.0100 H33···C12xiii 3.0800
C36···H12Aviii 2.7600 H33···C24xiii 2.7700
C62···H5B 2.8800 H34···C32xiii 3.1000
C62···H5A 2.8900 H34···H13Axiii 2.6000
C63···H16B 2.7900 H36···N4 2.8700
C63···H6vi 3.0600 H36···H13B 2.4400
C63···H16C 2.7000 H36···H12Aviii 2.5400
C65···H16Cii 2.9000 H62···C5 2.5900
C66···H1 2.77 (3) H62···H5A 2.4600
C66···H16Cii 2.8000 H62···H5B 2.3200
H1···C66 2.77 (3) H63···C16 2.5200
H1···H66 2.4800 H63···H16B 2.4100
H1···O6v 2.52 (3) H63···H16C 2.2100
H1···H4vi 2.2200 H65···O4x 2.4300
H2···H6 2.3400 H65···H5Ax 2.5000
H2···H26 2.3200 H66···H1 2.4800
H2···H16Bx 2.5200 H66···H6 2.5500
H3···C22 2.8200
C12—O2—C24 116.8 (2) C4—C3—H3 107.00
C16—O6—C64 117.1 (2) C13—C3—H3 107.00
N4—O4—H4 109.00 C4—C5—H5A 110.00
C2—N1—C6 111.7 (2) C4—C5—H5B 110.00
O4—N4—C4 111.9 (2) C6—C5—H5A 110.00
C6—N1—H1 111.1 (18) C6—C5—H5B 110.00
C2—N1—H1 106.3 (17) H5A—C5—H5B 108.00
N1—C2—C3 109.7 (3) N1—C6—H6 108.00
N1—C2—C21 109.2 (3) C5—C6—H6 108.00
C3—C2—C21 112.9 (2) C61—C6—H6 108.00
C2—C3—C4 108.7 (2) O2—C12—H12A 110.00
C2—C3—C13 111.5 (3) O2—C12—H12B 109.00
C4—C3—C13 114.1 (3) O2—C12—H12C 109.00
N4—C4—C5 126.2 (3) H12A—C12—H12B 109.00
N4—C4—C3 118.0 (3) H12A—C12—H12C 109.00
C3—C4—C5 115.6 (3) H12B—C12—H12C 109.00
C4—C5—C6 107.4 (3) C3—C13—H13A 109.00
N1—C6—C5 107.3 (2) C3—C13—H13B 109.00
C5—C6—C61 115.7 (3) C31—C13—H13A 109.00
N1—C6—C61 110.4 (3) C31—C13—H13B 109.00
C3—C13—C31 114.3 (3) H13A—C13—H13B 108.00
C22—C21—C26 118.0 (3) O6—C16—H16A 109.00
C2—C21—C26 121.0 (3) O6—C16—H16B 109.00
C2—C21—C22 121.0 (3) O6—C16—H16C 109.00
C21—C22—C23 121.2 (3) H16A—C16—H16B 109.00
C22—C23—C24 120.1 (3) H16A—C16—H16C 110.00
O2—C24—C23 115.3 (3) H16B—C16—H16C 109.00
O2—C24—C25 125.0 (3) C21—C22—H22 119.00
C23—C24—C25 119.7 (3) C23—C22—H22 119.00
C24—C25—C26 119.0 (3) C22—C23—H23 120.00
C21—C26—C25 122.1 (3) C24—C23—H23 120.00
C13—C31—C32 119.1 (3) C24—C25—H25 121.00
C13—C31—C36 122.8 (3) C26—C25—H25 121.00
C32—C31—C36 118.1 (3) C21—C26—H26 119.00
C31—C32—C33 120.5 (3) C25—C26—H26 119.00
C32—C33—C34 120.5 (4) C31—C32—H32 120.00
C33—C34—C35 120.1 (4) C33—C32—H32 120.00
C34—C35—C36 120.0 (3) C32—C33—H33 120.00
C31—C36—C35 120.8 (3) C34—C33—H33 120.00
C6—C61—C62 123.1 (3) C33—C34—H34 120.00
C6—C61—C66 119.3 (3) C35—C34—H34 120.00
C62—C61—C66 117.6 (3) C34—C35—H35 120.00
C61—C62—C63 121.5 (3) C36—C35—H35 120.00
C62—C63—C64 119.8 (3) C31—C36—H36 120.00
O6—C64—C65 115.6 (3) C35—C36—H36 120.00
O6—C64—C63 124.8 (3) C61—C62—H62 119.00
C63—C64—C65 119.6 (3) C63—C62—H62 119.00
C64—C65—C66 120.4 (3) C62—C63—H63 120.00
C61—C66—C65 121.2 (3) C64—C63—H63 120.00
N1—C2—H2 108.00 C64—C65—H65 120.00
C3—C2—H2 108.00 C66—C65—H65 120.00
C21—C2—H2 108.00 C61—C66—H66 119.00
C2—C3—H3 107.00 C65—C66—H66 119.00
C12—O2—C24—C23 −174.7 (3) C5—C6—C61—C66 168.6 (3)
C12—O2—C24—C25 4.3 (4) C3—C13—C31—C32 74.9 (4)
C16—O6—C64—C63 8.4 (4) C3—C13—C31—C36 −106.8 (4)
C16—O6—C64—C65 −171.6 (3) C2—C21—C22—C23 −177.6 (3)
C6—N1—C2—C3 61.5 (3) C26—C21—C22—C23 1.2 (5)
C6—N1—C2—C21 −174.2 (2) C2—C21—C26—C25 177.7 (3)
C2—N1—C6—C5 −65.7 (3) C22—C21—C26—C25 −1.0 (5)
C2—N1—C6—C61 167.5 (2) C21—C22—C23—C24 −0.2 (5)
O4—N4—C4—C3 179.1 (2) C22—C23—C24—O2 178.3 (3)
O4—N4—C4—C5 5.6 (4) C22—C23—C24—C25 −0.8 (5)
N1—C2—C3—C4 −51.9 (3) O2—C24—C25—C26 −178.1 (3)
N1—C2—C3—C13 −178.5 (2) C23—C24—C25—C26 0.9 (5)
C21—C2—C3—C4 −173.9 (3) C24—C25—C26—C21 0.0 (5)
C21—C2—C3—C13 59.5 (4) C13—C31—C32—C33 177.9 (3)
N1—C2—C21—C22 −61.0 (4) C36—C31—C32—C33 −0.4 (5)
N1—C2—C21—C26 120.4 (3) C13—C31—C36—C35 −176.9 (3)
C3—C2—C21—C22 61.4 (4) C32—C31—C36—C35 1.4 (5)
C3—C2—C21—C26 −117.3 (3) C31—C32—C33—C34 −0.7 (6)
C2—C3—C4—N4 −121.5 (3) C32—C33—C34—C35 1.0 (6)
C2—C3—C4—C5 52.7 (4) C33—C34—C35—C36 −0.1 (6)
C13—C3—C4—N4 3.6 (4) C34—C35—C36—C31 −1.1 (5)
C13—C3—C4—C5 177.8 (3) C6—C61—C62—C63 178.1 (3)
C2—C3—C13—C31 −155.9 (3) C66—C61—C62—C63 −0.4 (5)
C4—C3—C13—C31 80.5 (3) C6—C61—C66—C65 −179.1 (3)
N4—C4—C5—C6 116.3 (3) C62—C61—C66—C65 −0.6 (5)
C3—C4—C5—C6 −57.3 (3) C61—C62—C63—C64 0.8 (5)
C4—C5—C6—N1 60.3 (3) C62—C63—C64—O6 179.8 (3)
C4—C5—C6—C61 −176.1 (3) C62—C63—C64—C65 −0.2 (5)
N1—C6—C61—C62 112.1 (3) O6—C64—C65—C66 179.3 (3)
N1—C6—C61—C66 −69.4 (4) C63—C64—C65—C66 −0.8 (5)
C5—C6—C61—C62 −9.9 (5) C64—C65—C66—C61 1.2 (5)

Symmetry codes: (i) −x+1/2, y+1/2, z; (ii) −x+3/2, y−1/2, z; (iii) x+1/2, −y+1/2, −z; (iv) x−1/2, y, −z+1/2; (v) −x+1, −y+1, −z; (vi) −x+3/2, y+1/2, z; (vii) x−1, y, z; (viii) −x+1/2, y−1/2, z; (ix) x+1, y, z; (x) x−1/2, −y+1/2, −z; (xi) −x+1, y−1/2, −z+1/2; (xii) −x+1, y+1/2, −z+1/2; (xiii) x+1/2, y, −z+1/2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1···O6v 0.97 (3) 2.52 (3) 3.348 (3) 144 (2)
O4—H4···N1ii 0.84 2.01 2.818 (3) 160
C5—H5A···O4 0.99 2.27 2.705 (4) 105
C65—H65···O4x 0.95 2.43 3.334 (4) 158
C12—H12B···Cg1vii 0.98 2.89 3.314 (4) 107
C16—H16A···Cg2v 0.98 2.65 3.598 (4) 162

Symmetry codes: (v) −x+1, −y+1, −z; (ii) −x+3/2, y−1/2, z; (x) x−1/2, −y+1/2, −z; (vii) x−1, y, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: WN2266).

References

  1. Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
  2. Jayabharathi, J., Manimekalai, A., Consalata Vani, T. & Padmavathy, M. (2007). Eur. J. Med. Chem.42, 593–605. [DOI] [PubMed]
  3. Nonius (2000). COLLECT Nonius BV, Delft, The Netherlands.
  4. Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307–326. New York: Academic Press.
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  7. Thiruvalluvar, A., Balamurugan, S., Butcher, R. J., Manimekalai, A. & Jayabharathi, J. (2007). Acta Cryst. E63, o4533. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808016449/wn2266sup1.cif

e-64-o1211-sup1.cif (29.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808016449/wn2266Isup2.hkl

e-64-o1211-Isup2.hkl (187.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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