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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2008 Jun 19;64(Pt 7):o1308. doi: 10.1107/S1600536808018345

4,4′-[2,2-Dimethyl­propane-1,3-diyl­bis(nitrilo­methyl­idyne)]dibenzonitrile

Hoong-Kun Fun a,*, Hadi Kargar b,, Reza Kia a,§
PMCID: PMC2961864  PMID: 21202936

Abstract

The title compound, C21H20N4, is a bidentate Schiff base ligand. An intra­molecular C—H⋯N hydrogen bond forms a five-membered ring, producing an S(5) ring motif. The cyano and imino [–C(H2)—N=C–] functional groups are coplanar with the benzene ring in each half of the mol­ecule. The packing of the mol­ecules is controlled by C—H⋯π and π–π inter­actions [centroid-to-centroid distance = 3.6944 (8) Å].

Related literature

For related literature on hydrogen-bond motifs, see Bernstein et al. (1995). For values of bond lengths, see Allen et al. (1987). For related structures, see, for example: Li et al. (2005); Bomfim et al. (2005); Glidewell et al. (2005, 2006); Sun et al. (2004); Habibi et al. (2007); Fun et al. (2008).graphic file with name e-64-o1308-scheme1.jpg

Experimental

Crystal data

  • C21H20N4

  • M r = 328.41

  • Monoclinic, Inline graphic

  • a = 6.3833 (2) Å

  • b = 34.0679 (8) Å

  • c = 8.5190 (2) Å

  • β = 100.654 (2)°

  • V = 1820.65 (8) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.07 mm−1

  • T = 100.0 (1) K

  • 0.42 × 0.20 × 0.19 mm

Data collection

  • Bruker SMART APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker 2005) T min = 0.970, T max = 0.986

  • 21813 measured reflections

  • 5329 independent reflections

  • 3711 reflections with I > 2σ(I)

  • R int = 0.046

Refinement

  • R[F 2 > 2σ(F 2)] = 0.056

  • wR(F 2) = 0.139

  • S = 1.04

  • 5329 reflections

  • 228 parameters

  • H-atom parameters constrained

  • Δρmax = 0.24 e Å−3

  • Δρmin = −0.20 e Å−3

Data collection: APEX2 (Bruker, 2005); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808018345/at2578sup1.cif

e-64-o1308-sup1.cif (19.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808018345/at2578Isup2.hkl

e-64-o1308-Isup2.hkl (261KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 is the centroid of the C12–C17 benzene ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C20—H20B⋯N2 0.96 2.57 2.923 (2) 102
C21—H21CCg1i 0.96 2.95 3.7193 (16) 138

Symmetry code: (i) Inline graphic.

Acknowledgments

HKF and RK thank the Malaysian Government and Universiti sains Malaysia for Science Fund Grant No. 305/PFIZIK/613312. RK thanks Universiti Sains Malaysia for a post-doctoral research fellowship. HK thanks PNU for financial support.

supplementary crystallographic information

Comment

Schiff bases are one of most prevalent mixed-donor ligands in the field of coordination chemistry. They play an important role in the development of coordination chemistry related to catalysis and enzymatic reactions, magnetism, and supramolecular architectures. Structures of Schiff bases derived from substituted benzaldehydes and closely related to the title compound have been reported (Li et al., 2005; Bomfim et al., 2005; Glidewell et al., 2005, 2006; Sun et al., 2004; Habibi et al., 2007; Fun et al., 2008).

An intramolecular C—H···N hydrogen bond forms a five-membered ring, producing an S(5) ring motif (Bernstein et al., 1995). The bond lengths and angles in the molecule (Fig. 1) are within normal ranges (Allen et al., 1987). The cyano and imino (—C(H2)—N═C—) functional groups are coplanar with the benzene ring in each half of the molcule. The torsion angles of C6—C7—N1—C8 and C12—C11—N2—C10 are -178.95 (13) and -179.43 (12)°, respectively. The packing of the molecule, (Fig. 2), is controlled by C—H···π and π–π interactions [centroid-centroid distance being 3.6944 (8) Å] (Table 1).

Experimental

The synthetic method has been described earlier (Fun et al., 2008). Single crystals suitable for X-ray diffraction were obtained by evaporation of an ethanol solution at room temperature.

Refinement

H atoms were positioned geometrically and refined using a riding model with C—H = 0.93 Å for aromatic H and 0.97 Å for methylene and 0.96 Å for methyl H atoms. The Uiso values were constrained to be 1.5Ueq of the carrier atom for the methyl H atoms and 1.2Ueq for the remaining H atoms. A rotating-group model was used for the methyl groups.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with atom labels and 50% probability ellipsoids for non-H atoms. Intramolecular hydrogen bond is shown as a dashed line.

Fig. 2.

Fig. 2.

The crystal packing, viewed down the a axis, showing stacking of the benzene rings. Intramolecular H bonds are drawn as dashed lines.

Crystal data

C21H20N4 F000 = 696
Mr = 328.41 Dx = 1.198 Mg m3
Monoclinic, P21/c Mo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 3870 reflections
a = 6.3833 (2) Å θ = 2.4–29.3º
b = 34.0679 (8) Å µ = 0.07 mm1
c = 8.5190 (2) Å T = 100.0 (1) K
β = 100.654 (2)º Block, colourless
V = 1820.65 (8) Å3 0.42 × 0.20 × 0.19 mm
Z = 4

Data collection

Bruker SMART APEXII CCD area-detector diffractometer 5329 independent reflections
Radiation source: fine-focus sealed tube 3711 reflections with I > 2σ(I)
Monochromator: graphite Rint = 0.046
T = 100.0(1) K θmax = 30.2º
φ and ω scans θmin = 1.2º
Absorption correction: multi-scan(SADABS; Bruker 2005) h = −9→7
Tmin = 0.970, Tmax = 0.986 k = −48→48
21813 measured reflections l = −12→12

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.056 H-atom parameters constrained
wR(F2) = 0.139   w = 1/[σ2(Fo2) + (0.0568P)2 + 0.5007P] where P = (Fo2 + 2Fc2)/3
S = 1.04 (Δ/σ)max < 0.001
5329 reflections Δρmax = 0.24 e Å3
228 parameters Δρmin = −0.19 e Å3
Primary atom site location: structure-invariant direct methods Extinction correction: none

Special details

Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
N1 0.8180 (2) 0.14310 (4) 1.22220 (14) 0.0240 (3)
N2 0.7297 (2) 0.07939 (4) 0.76666 (14) 0.0243 (3)
N3 0.1075 (3) 0.23585 (4) 1.75196 (17) 0.0346 (4)
N4 0.2208 (2) 0.01242 (4) −0.06341 (15) 0.0278 (3)
C1 0.4959 (3) 0.16261 (4) 1.41380 (17) 0.0234 (3)
H1A 0.4844 0.1376 1.3689 0.028*
C2 0.3530 (3) 0.17457 (4) 1.50763 (17) 0.0243 (3)
H2A 0.2462 0.1576 1.5267 0.029*
C3 0.3698 (3) 0.21224 (4) 1.57374 (16) 0.0226 (3)
C4 0.5288 (3) 0.23767 (4) 1.54525 (17) 0.0254 (3)
H4A 0.5386 0.2628 1.5886 0.031*
C5 0.6719 (3) 0.22545 (4) 1.45229 (17) 0.0237 (3)
H5A 0.7789 0.2424 1.4335 0.028*
C6 0.6573 (3) 0.18785 (4) 1.38618 (16) 0.0211 (3)
C7 0.8171 (3) 0.17624 (4) 1.29000 (16) 0.0224 (3)
H7A 0.9230 0.1942 1.2785 0.027*
C8 0.9911 (3) 0.13680 (4) 1.13468 (17) 0.0245 (3)
H8A 1.0761 0.1147 1.1816 0.029*
H8B 1.0823 0.1598 1.1469 0.029*
C9 0.9149 (3) 0.12886 (4) 0.95573 (16) 0.0215 (3)
C10 0.7881 (3) 0.09017 (4) 0.93463 (16) 0.0232 (3)
H10A 0.8736 0.0694 0.9923 0.028*
H10B 0.6600 0.0930 0.9796 0.028*
C11 0.5405 (3) 0.06825 (4) 0.71580 (16) 0.0226 (3)
H11A 0.4445 0.0675 0.7857 0.027*
C12 0.4686 (3) 0.05644 (4) 0.54744 (16) 0.0212 (3)
C13 0.6067 (3) 0.05915 (4) 0.43861 (17) 0.0231 (3)
H13A 0.7442 0.0687 0.4719 0.028*
C14 0.5402 (3) 0.04776 (4) 0.28203 (17) 0.0233 (3)
H14A 0.6322 0.0497 0.2096 0.028*
C15 0.3345 (3) 0.03329 (4) 0.23295 (16) 0.0212 (3)
C16 0.1937 (3) 0.03068 (4) 0.33940 (17) 0.0256 (3)
H16A 0.0561 0.0212 0.3058 0.031*
C17 0.2624 (3) 0.04247 (4) 0.49654 (17) 0.0255 (3)
H17A 0.1694 0.0410 0.5685 0.031*
C18 0.2220 (3) 0.22512 (4) 1.67256 (18) 0.0270 (3)
C19 0.2687 (3) 0.02115 (4) 0.06860 (17) 0.0227 (3)
C20 1.1140 (3) 0.12547 (5) 0.88075 (19) 0.0287 (4)
H20A 1.1895 0.1500 0.8920 0.043*
H20B 1.0729 0.1192 0.7695 0.043*
H20C 1.2046 0.1051 0.9337 0.043*
C21 0.7745 (3) 0.16266 (4) 0.87814 (18) 0.0274 (4)
H21A 0.8507 0.1870 0.8986 0.041*
H21B 0.6466 0.1638 0.9222 0.041*
H21C 0.7381 0.1584 0.7650 0.041*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
N1 0.0265 (8) 0.0254 (6) 0.0199 (6) −0.0005 (5) 0.0037 (5) −0.0025 (5)
N2 0.0282 (8) 0.0233 (6) 0.0222 (6) −0.0009 (5) 0.0070 (5) −0.0030 (5)
N3 0.0335 (10) 0.0336 (8) 0.0379 (8) 0.0006 (6) 0.0099 (7) −0.0063 (6)
N4 0.0268 (8) 0.0305 (7) 0.0270 (6) −0.0013 (6) 0.0071 (6) −0.0028 (5)
C1 0.0282 (9) 0.0186 (7) 0.0219 (7) −0.0002 (6) 0.0011 (6) −0.0015 (5)
C2 0.0257 (9) 0.0222 (7) 0.0244 (7) −0.0010 (6) 0.0028 (6) 0.0011 (5)
C3 0.0230 (9) 0.0247 (7) 0.0193 (6) 0.0030 (6) 0.0015 (6) −0.0003 (5)
C4 0.0319 (10) 0.0203 (7) 0.0234 (7) 0.0002 (6) 0.0034 (6) −0.0040 (5)
C5 0.0275 (9) 0.0212 (7) 0.0222 (7) −0.0033 (6) 0.0037 (6) −0.0006 (5)
C6 0.0236 (9) 0.0214 (7) 0.0168 (6) 0.0013 (6) 0.0002 (6) 0.0006 (5)
C7 0.0232 (9) 0.0225 (7) 0.0206 (6) −0.0012 (6) 0.0019 (6) 0.0007 (5)
C8 0.0250 (9) 0.0235 (7) 0.0244 (7) 0.0015 (6) 0.0029 (6) −0.0025 (5)
C9 0.0232 (9) 0.0200 (7) 0.0220 (6) 0.0002 (6) 0.0059 (6) −0.0009 (5)
C10 0.0275 (9) 0.0234 (7) 0.0191 (6) 0.0005 (6) 0.0056 (6) −0.0007 (5)
C11 0.0286 (10) 0.0193 (7) 0.0218 (7) 0.0010 (6) 0.0095 (6) 0.0000 (5)
C12 0.0277 (9) 0.0152 (6) 0.0214 (6) 0.0012 (6) 0.0063 (6) 0.0000 (5)
C13 0.0234 (9) 0.0226 (7) 0.0240 (7) −0.0016 (6) 0.0058 (6) −0.0023 (5)
C14 0.0269 (9) 0.0225 (7) 0.0226 (7) −0.0003 (6) 0.0101 (6) −0.0013 (5)
C15 0.0266 (9) 0.0161 (6) 0.0211 (6) 0.0020 (6) 0.0051 (6) −0.0004 (5)
C16 0.0256 (9) 0.0258 (7) 0.0257 (7) −0.0031 (6) 0.0054 (6) −0.0004 (6)
C17 0.0274 (10) 0.0289 (8) 0.0227 (7) −0.0025 (7) 0.0107 (6) 0.0002 (6)
C18 0.0300 (10) 0.0236 (7) 0.0268 (7) 0.0002 (7) 0.0037 (7) −0.0020 (6)
C19 0.0240 (9) 0.0199 (7) 0.0253 (7) 0.0007 (6) 0.0075 (6) 0.0000 (5)
C20 0.0284 (10) 0.0290 (8) 0.0309 (8) −0.0013 (7) 0.0112 (7) −0.0014 (6)
C21 0.0306 (10) 0.0242 (7) 0.0274 (7) 0.0020 (7) 0.0053 (7) 0.0009 (6)

Geometric parameters (Å, °)

N1—C7 1.2687 (18) C9—C21 1.532 (2)
N1—C8 1.459 (2) C9—C10 1.539 (2)
N2—C11 1.264 (2) C10—H10A 0.9700
N2—C10 1.4576 (17) C10—H10B 0.9700
N3—C18 1.143 (2) C11—C12 1.4786 (19)
N4—C19 1.1486 (19) C11—H11A 0.9300
C1—C2 1.380 (2) C12—C17 1.391 (2)
C1—C6 1.395 (2) C12—C13 1.396 (2)
C1—H1A 0.9300 C13—C14 1.379 (2)
C2—C3 1.398 (2) C13—H13A 0.9300
C2—H2A 0.9300 C14—C15 1.392 (2)
C3—C4 1.389 (2) C14—H14A 0.9300
C3—C18 1.444 (2) C15—C16 1.392 (2)
C4—C5 1.379 (2) C15—C19 1.446 (2)
C4—H4A 0.9300 C16—C17 1.389 (2)
C5—C6 1.396 (2) C16—H16A 0.9300
C5—H5A 0.9300 C17—H17A 0.9300
C6—C7 1.476 (2) C20—H20A 0.9600
C7—H7A 0.9300 C20—H20B 0.9600
C8—C9 1.536 (2) C20—H20C 0.9600
C8—H8A 0.9700 C21—H21A 0.9600
C8—H8B 0.9700 C21—H21B 0.9600
C9—C20 1.529 (2) C21—H21C 0.9600
C7—N1—C8 115.55 (14) N2—C10—H10B 109.4
C11—N2—C10 117.85 (13) C9—C10—H10B 109.4
C2—C1—C6 120.21 (13) H10A—C10—H10B 108.0
C2—C1—H1A 119.9 N2—C11—C12 121.33 (14)
C6—C1—H1A 119.9 N2—C11—H11A 119.3
C1—C2—C3 119.66 (15) C12—C11—H11A 119.3
C1—C2—H2A 120.2 C17—C12—C13 119.54 (13)
C3—C2—H2A 120.2 C17—C12—C11 120.10 (14)
C4—C3—C2 120.41 (14) C13—C12—C11 120.36 (15)
C4—C3—C18 119.30 (14) C14—C13—C12 120.32 (15)
C2—C3—C18 120.29 (15) C14—C13—H13A 119.8
C5—C4—C3 119.66 (14) C12—C13—H13A 119.8
C5—C4—H4A 120.2 C13—C14—C15 119.65 (14)
C3—C4—H4A 120.2 C13—C14—H14A 120.2
C4—C5—C6 120.45 (15) C15—C14—H14A 120.2
C4—C5—H5A 119.8 C16—C15—C14 120.88 (13)
C6—C5—H5A 119.8 C16—C15—C19 120.37 (15)
C1—C6—C5 119.60 (14) C14—C15—C19 118.75 (14)
C1—C6—C7 122.45 (13) C17—C16—C15 118.87 (16)
C5—C6—C7 117.95 (14) C17—C16—H16A 120.6
N1—C7—C6 123.57 (15) C15—C16—H16A 120.6
N1—C7—H7A 118.2 C16—C17—C12 120.73 (14)
C6—C7—H7A 118.2 C16—C17—H17A 119.6
N1—C8—C9 113.72 (13) C12—C17—H17A 119.6
N1—C8—H8A 108.8 N3—C18—C3 178.73 (19)
C9—C8—H8A 108.8 N4—C19—C15 177.74 (17)
N1—C8—H8B 108.8 C9—C20—H20A 109.5
C9—C8—H8B 108.8 C9—C20—H20B 109.5
H8A—C8—H8B 107.7 H20A—C20—H20B 109.5
C20—C9—C21 109.99 (12) C9—C20—H20C 109.5
C20—C9—C8 107.02 (13) H20A—C20—H20C 109.5
C21—C9—C8 110.40 (12) H20B—C20—H20C 109.5
C20—C9—C10 110.25 (12) C9—C21—H21A 109.5
C21—C9—C10 109.88 (13) C9—C21—H21B 109.5
C8—C9—C10 109.26 (11) H21A—C21—H21B 109.5
N2—C10—C9 111.35 (11) C9—C21—H21C 109.5
N2—C10—H10A 109.4 H21A—C21—H21C 109.5
C9—C10—H10A 109.4 H21B—C21—H21C 109.5
C6—C1—C2—C3 0.6 (2) C21—C9—C10—N2 64.21 (16)
C1—C2—C3—C4 0.2 (2) C8—C9—C10—N2 −174.52 (13)
C1—C2—C3—C18 −179.80 (14) C10—N2—C11—C12 −179.43 (12)
C2—C3—C4—C5 −0.6 (2) N2—C11—C12—C17 176.85 (14)
C18—C3—C4—C5 179.36 (15) N2—C11—C12—C13 −3.1 (2)
C3—C4—C5—C6 0.3 (2) C17—C12—C13—C14 −0.6 (2)
C2—C1—C6—C5 −0.8 (2) C11—C12—C13—C14 179.35 (13)
C2—C1—C6—C7 178.55 (14) C12—C13—C14—C15 −0.4 (2)
C4—C5—C6—C1 0.4 (2) C13—C14—C15—C16 0.9 (2)
C4—C5—C6—C7 −179.02 (14) C13—C14—C15—C19 −179.39 (13)
C8—N1—C7—C6 −178.95 (13) C14—C15—C16—C17 −0.5 (2)
C1—C6—C7—N1 1.7 (2) C19—C15—C16—C17 179.79 (14)
C5—C6—C7—N1 −178.92 (14) C15—C16—C17—C12 −0.4 (2)
C7—N1—C8—C9 −119.58 (14) C13—C12—C17—C16 1.0 (2)
N1—C8—C9—C20 176.60 (12) C11—C12—C17—C16 −178.95 (13)
N1—C8—C9—C21 56.91 (17) C4—C3—C18—N3 −19 (9)
N1—C8—C9—C10 −64.04 (16) C2—C3—C18—N3 161 (9)
C11—N2—C10—C9 −134.31 (14) C16—C15—C19—N4 149 (5)
C20—C9—C10—N2 −57.17 (17) C14—C15—C19—N4 −31 (5)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C20—H20B···N2 0.96 2.57 2.923 (2) 102
C21—H21C···Cg1i 0.96 2.95 3.7193 (16) 138

Symmetry codes: (i) x, y, z−1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: AT2578).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808018345/at2578sup1.cif

e-64-o1308-sup1.cif (19.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808018345/at2578Isup2.hkl

e-64-o1308-Isup2.hkl (261KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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