Abstract
Cocrystallization of 4-carboxypyridine (4-CPY) and 5-sulfosalicylic acid (5-H2SSA) yields the title salt, C6H6NO2 +·C7H5O6S−. In the crystal structure, the components of the salt are linked by a combination of intermolecular O—H⋯O and N—H⋯O, and weak C—H⋯O hydrogen bonds, forming a three-dimensional framework.
Related literature
For related literature, see: Aakeröy & Salmon (2005 ▶); Meng et al. (2007 ▶, 2008 ▶); Fan et al. (2005 ▶); Smith et al. (2006 ▶).
Experimental
Crystal data
C6H6NO2 +·C7H5O6S−
M r = 341.29
Orthorhombic,
a = 6.6358 (6) Å
b = 13.0514 (12) Å
c = 16.7415 (14) Å
V = 1449.9 (2) Å3
Z = 4
Mo Kα radiation
μ = 0.27 mm−1
T = 298 (2) K
0.30 × 0.04 × 0.02 mm
Data collection
Bruker SMART APEX CCD area-detector diffractometer
Absorption correction: none
13287 measured reflections
2545 independent reflections
1522 reflections with I > 2σ(I)
R int = 0.143
Refinement
R[F 2 > 2σ(F 2)] = 0.072
wR(F 2) = 0.168
S = 0.97
2545 reflections
220 parameters
5 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.45 e Å−3
Δρmin = −0.37 e Å−3
Absolute structure: Flack (1983 ▶), 1056 Friedel pairs
Flack parameter: −0.1 (2)
Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: PLATON.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808015882/lh2633sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808015882/lh2633Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H1⋯O5i | 0.82 (2) | 1.82 (2) | 2.632 (5) | 170 (7) |
| N1—H1A⋯O2ii | 0.85 (2) | 2.57 (5) | 3.140 (7) | 125 (5) |
| C3—H3⋯O3ii | 0.93 | 2.51 | 3.379 (7) | 156 |
| O3—H3A⋯O6iii | 0.82 (2) | 2.57 (5) | 3.140 (5) | 127 (6) |
| O7—H7⋯O4iv | 0.83 (5) | 1.87 (4) | 2.654 (5) | 155 (8) |
| C10—H10⋯O8v | 0.93 | 2.46 | 3.152 (8) | 132 |
| C11—H11⋯O4vi | 0.93 | 2.57 | 3.257 (7) | 131 |
| N1—H1A⋯O6 | 0.85 (2) | 2.14 (3) | 2.902 (6) | 149 (5) |
| O3—H3A⋯O2 | 0.82 (2) | 1.90 (4) | 2.626 (5) | 146 (6) |
| C10—H10⋯O4 | 0.93 | 2.54 | 3.331 (7) | 143 |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
; (v)
; (vi)
.
Acknowledgments
This work was supported by the National Natural Science Foundation of China under grants No. 10574047, No. 10574048 and No. 20490210. This work was also supported by the National 973 Project under grant No. 2006CB921605.
supplementary crystallographic information
Comment
As awareness of the importance of pharmaceutical molecular adducts grows, it becomes imperative to fully understand and investigate the intermolecular interactions in a binary, ternary or multi-component organic adducts (Aakeröy and Salmon, 2005). 5-sulfosalicylic acid (5-H2SSA), is a particularly strong acid which is capable of donating its sulfonic protons to many N-containing heterocycles, forming organic salts (Smith et al., 2006; Meng et al., 2007 and 2008; Fan et al., 2005). With the aim of gaining more insight into hydrogen-bonding interactions involving 5-H2SSA and pyridine derivatives, we report here the molecular and supramolecular structure of the title compound.
In the asymmetric unit of title compound (I), contains one 5-HSSA- and one 4-CPY+ ion. Similar to the analogous organic adducts reported (Meng et al., 2007), the H atom is transferred from the sulfonic acid group to the pyridine N atom forming an 1:1 organic salt.
In the crystal structure, the component ions are linked by a combination of O—H···O, N—H···O and C—H···O hydrogen bonds (Table 1), forming a three-dimensional network (Fig.2). An analysis using PLATON (Spek, 2003), showed that there are no other interactions (e.g. C—H···π and π-π) observed in the crystal structure.
Experimental
All reagents and solvents were used as obtained without further purification. Equivalent molar amount of 4-carboxypyridine and 5-sulfosalicylic acid dihydrate were dissolved in 95% methanol (20 ml). The mixture was stirred for 10 minutes at 330 K and then filtered. Colorless needles of (I) suitable for single-crystal X-ray diffraction analysis grew at the bottom of the vessel in one week after slow evaporation of the solution.
Refinement
Owing to the poor quality the crystal selected for diffraction, conventional least squares refinement of the structural model gave R1 = 0.072. We attempted to select better crystals for diffraction, but none were an improvement. The title compound is racemic in solution but spontaneously resolved upon crystallization. The absolute configuration of the molecules in the crystal selected was readily determined and the configuration has no chemical significance.
H atoms bonded to C atoms were positioned geometrically with C–H = 0.93 Å (aromatic) and refined in a riding mode [Uiso(H) = 1.2Ueq(aromatic C)]. H atoms bonded to N and O atoms were found in Fourier difference maps and refined with the constraints of N—H = 0.86 (2) Å,O—H = 0.82 (2) Å, and Uiso(H) = 1.2Ueq(N) or 1.5Ueq(O)].
Figures
Fig. 1.
Molecular structure of (I), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H-bonds are shown as dashed lines.
Fig. 2.
Part of the crystal structure of (I), showing the formation of the three-dimensional framework structure. Hydrogen bonds are shown as dashed lines. For the sake of clarity, H atoms not involved in the motif have been omitted from the drawing.
Crystal data
| C6H6NO2+·C7H5O6S− | F(000) = 704 |
| Mr = 341.29 | Dx = 1.563 Mg m−3 |
| Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: P 2ac 2ab | Cell parameters from 950 reflections |
| a = 6.6358 (6) Å | θ = 3.1–19.7° |
| b = 13.0514 (12) Å | µ = 0.27 mm−1 |
| c = 16.7415 (14) Å | T = 298 K |
| V = 1449.9 (2) Å3 | Needle, colorless |
| Z = 4 | 0.30 × 0.04 × 0.02 mm |
Data collection
| Bruker SMART APEX CCD area-detector diffractometer | 1522 reflections with I > 2σ(I) |
| Radiation source: fine focus sealed Siemens Mo tube | Rint = 0.143 |
| graphite | θmax = 25.0°, θmin = 2.9° |
| 0.3° wide ω exposures scans | h = −7→7 |
| 13287 measured reflections | k = −15→15 |
| 2545 independent reflections | l = −19→18 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.072 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.168 | w = 1/[σ2(Fo2) + (0.0554P)2] where P = (Fo2 + 2Fc2)/3 |
| S = 0.97 | (Δ/σ)max < 0.001 |
| 2545 reflections | Δρmax = 0.45 e Å−3 |
| 220 parameters | Δρmin = −0.37 e Å−3 |
| 5 restraints | Absolute structure: Flack (1983), 1056 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.1 (2) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.5027 (9) | 0.7437 (4) | 0.2884 (4) | 0.0404 (15) | |
| C2 | 0.4566 (8) | 0.6435 (4) | 0.2645 (3) | 0.0334 (13) | |
| C3 | 0.4291 (9) | 0.5677 (4) | 0.3235 (3) | 0.0362 (13) | |
| H3 | 0.3988 | 0.5009 | 0.3082 | 0.043* | |
| C4 | 0.4464 (9) | 0.5908 (4) | 0.4022 (3) | 0.0410 (15) | |
| C5 | 0.4945 (12) | 0.6910 (4) | 0.4256 (4) | 0.0563 (18) | |
| H5 | 0.5083 | 0.7069 | 0.4794 | 0.068* | |
| C6 | 0.5212 (12) | 0.7655 (4) | 0.3689 (4) | 0.062 (2) | |
| H6 | 0.5524 | 0.8319 | 0.3848 | 0.074* | |
| C7 | 0.4373 (9) | 0.6190 (4) | 0.1788 (3) | 0.0393 (14) | |
| O1 | 0.3740 (8) | 0.5263 (3) | 0.1634 (2) | 0.0556 (12) | |
| H1 | 0.335 (11) | 0.517 (5) | 0.1176 (19) | 0.083* | |
| O2 | 0.4714 (6) | 0.6826 (3) | 0.1260 (2) | 0.0496 (11) | |
| O3 | 0.5284 (8) | 0.8216 (3) | 0.2371 (2) | 0.0554 (13) | |
| H3A | 0.524 (13) | 0.799 (5) | 0.1914 (18) | 0.083* | |
| O4 | 0.5754 (7) | 0.5082 (3) | 0.5343 (2) | 0.0524 (11) | |
| O5 | 0.2154 (6) | 0.5225 (3) | 0.5150 (2) | 0.0519 (11) | |
| O6 | 0.4088 (7) | 0.3976 (2) | 0.4391 (2) | 0.0474 (10) | |
| S1 | 0.4079 (2) | 0.49700 (10) | 0.47738 (8) | 0.0424 (4) | |
| C8 | 0.4478 (9) | 0.1284 (4) | 0.6933 (4) | 0.0466 (15) | |
| C9 | 0.5068 (10) | 0.2291 (5) | 0.6931 (4) | 0.0551 (18) | |
| H9 | 0.5412 | 0.2611 | 0.7409 | 0.066* | |
| C10 | 0.5153 (10) | 0.2820 (5) | 0.6234 (4) | 0.0538 (17) | |
| H10 | 0.5557 | 0.3503 | 0.6230 | 0.065* | |
| C11 | 0.4091 (10) | 0.1365 (5) | 0.5529 (4) | 0.0531 (16) | |
| H11 | 0.3762 | 0.1060 | 0.5045 | 0.064* | |
| C12 | 0.4005 (9) | 0.0804 (4) | 0.6229 (4) | 0.0474 (15) | |
| H12 | 0.3635 | 0.0117 | 0.6223 | 0.057* | |
| C13 | 0.4301 (10) | 0.0658 (5) | 0.7697 (4) | 0.0491 (16) | |
| N1 | 0.4651 (8) | 0.2351 (4) | 0.5553 (4) | 0.0533 (14) | |
| H1A | 0.480 (8) | 0.267 (4) | 0.511 (2) | 0.064* | |
| O7 | 0.4546 (8) | 0.1208 (3) | 0.8342 (3) | 0.0669 (14) | |
| H7 | 0.478 (13) | 0.078 (4) | 0.870 (3) | 0.100* | |
| O8 | 0.3980 (8) | −0.0253 (3) | 0.7684 (3) | 0.0715 (14) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.037 (4) | 0.045 (3) | 0.040 (3) | −0.008 (3) | 0.006 (3) | 0.005 (3) |
| C2 | 0.025 (3) | 0.041 (3) | 0.035 (3) | 0.003 (2) | 0.000 (3) | 0.004 (2) |
| C3 | 0.028 (3) | 0.039 (3) | 0.042 (4) | −0.002 (2) | 0.002 (3) | 0.000 (3) |
| C4 | 0.034 (4) | 0.046 (3) | 0.043 (4) | −0.003 (3) | 0.007 (3) | 0.002 (3) |
| C5 | 0.077 (5) | 0.054 (3) | 0.038 (3) | −0.006 (4) | −0.006 (4) | −0.005 (3) |
| C6 | 0.085 (6) | 0.043 (3) | 0.057 (4) | −0.017 (4) | 0.009 (4) | −0.003 (3) |
| C7 | 0.035 (4) | 0.043 (3) | 0.040 (4) | 0.009 (3) | 0.001 (3) | 0.004 (3) |
| O1 | 0.079 (3) | 0.047 (2) | 0.041 (3) | −0.011 (2) | −0.012 (3) | −0.003 (2) |
| O2 | 0.048 (3) | 0.057 (2) | 0.043 (2) | −0.007 (2) | 0.002 (2) | 0.003 (2) |
| O3 | 0.075 (4) | 0.050 (2) | 0.042 (2) | −0.010 (2) | −0.003 (3) | 0.008 (2) |
| O4 | 0.054 (3) | 0.066 (2) | 0.037 (2) | −0.001 (2) | −0.012 (2) | −0.003 (2) |
| O5 | 0.040 (3) | 0.064 (3) | 0.052 (3) | 0.002 (2) | 0.021 (2) | 0.008 (2) |
| O6 | 0.054 (3) | 0.047 (2) | 0.042 (2) | 0.000 (2) | 0.000 (3) | −0.0028 (18) |
| S1 | 0.0461 (9) | 0.0454 (8) | 0.0356 (8) | −0.0018 (8) | 0.0026 (7) | 0.0006 (7) |
| C8 | 0.028 (4) | 0.051 (3) | 0.061 (4) | 0.008 (3) | −0.002 (3) | 0.002 (3) |
| C9 | 0.044 (4) | 0.059 (4) | 0.063 (5) | 0.002 (3) | −0.006 (4) | 0.003 (3) |
| C10 | 0.031 (4) | 0.060 (4) | 0.070 (5) | 0.000 (3) | −0.001 (4) | 0.007 (4) |
| C11 | 0.030 (4) | 0.070 (4) | 0.059 (4) | 0.001 (3) | 0.002 (4) | −0.009 (3) |
| C12 | 0.029 (3) | 0.060 (4) | 0.053 (4) | −0.001 (3) | −0.003 (4) | 0.006 (4) |
| C13 | 0.039 (4) | 0.053 (4) | 0.056 (4) | 0.010 (3) | −0.006 (4) | 0.009 (3) |
| N1 | 0.033 (3) | 0.065 (4) | 0.062 (4) | 0.003 (3) | 0.008 (3) | 0.011 (3) |
| O7 | 0.081 (4) | 0.064 (3) | 0.055 (3) | −0.001 (3) | −0.007 (3) | 0.006 (2) |
| O8 | 0.077 (4) | 0.062 (3) | 0.075 (3) | −0.008 (3) | −0.011 (3) | 0.015 (2) |
Geometric parameters (Å, °)
| C1—O3 | 1.343 (6) | O5—S1 | 1.462 (4) |
| C1—C6 | 1.382 (8) | O6—S1 | 1.446 (3) |
| C1—C2 | 1.401 (7) | C8—C12 | 1.370 (8) |
| C2—C3 | 1.409 (7) | C8—C9 | 1.371 (8) |
| C2—C7 | 1.477 (7) | C8—C13 | 1.523 (8) |
| C3—C4 | 1.357 (7) | C9—C10 | 1.359 (8) |
| C3—H3 | 0.9300 | C9—H9 | 0.9300 |
| C4—C5 | 1.401 (7) | C10—N1 | 1.336 (8) |
| C4—S1 | 1.775 (5) | C10—H10 | 0.9300 |
| C5—C6 | 1.371 (8) | C11—N1 | 1.340 (7) |
| C5—H5 | 0.9300 | C11—C12 | 1.383 (8) |
| C6—H6 | 0.9300 | C11—H11 | 0.9300 |
| C7—O2 | 1.233 (6) | C12—H12 | 0.9300 |
| C7—O1 | 1.306 (6) | C13—O8 | 1.209 (7) |
| O1—H1 | 0.82 (2) | C13—O7 | 1.306 (7) |
| O3—H3A | 0.82 (2) | N1—H1A | 0.85 (2) |
| O4—S1 | 1.472 (4) | O7—H7 | 0.83 (5) |
| O3—C1—C6 | 117.1 (5) | O6—S1—C4 | 107.7 (2) |
| O3—C1—C2 | 123.5 (5) | O5—S1—C4 | 105.9 (3) |
| C6—C1—C2 | 119.3 (5) | O4—S1—C4 | 106.4 (3) |
| C1—C2—C3 | 118.9 (5) | C12—C8—C9 | 120.1 (6) |
| C1—C2—C7 | 119.9 (5) | C12—C8—C13 | 117.4 (5) |
| C3—C2—C7 | 121.2 (5) | C9—C8—C13 | 122.5 (6) |
| C4—C3—C2 | 120.8 (5) | C10—C9—C8 | 120.1 (6) |
| C4—C3—H3 | 119.6 | C10—C9—H9 | 120.0 |
| C2—C3—H3 | 119.6 | C8—C9—H9 | 120.0 |
| C3—C4—C5 | 119.9 (5) | N1—C10—C9 | 119.3 (6) |
| C3—C4—S1 | 121.5 (4) | N1—C10—H10 | 120.3 |
| C5—C4—S1 | 118.6 (4) | C9—C10—H10 | 120.3 |
| C6—C5—C4 | 119.9 (6) | N1—C11—C12 | 119.7 (6) |
| C6—C5—H5 | 120.1 | N1—C11—H11 | 120.1 |
| C4—C5—H5 | 120.1 | C12—C11—H11 | 120.1 |
| C5—C6—C1 | 121.1 (5) | C8—C12—C11 | 118.5 (5) |
| C5—C6—H6 | 119.4 | C8—C12—H12 | 120.8 |
| C1—C6—H6 | 119.4 | C11—C12—H12 | 120.8 |
| O2—C7—O1 | 122.8 (5) | O8—C13—O7 | 125.3 (6) |
| O2—C7—C2 | 122.3 (5) | O8—C13—C8 | 121.7 (6) |
| O1—C7—C2 | 114.8 (5) | O7—C13—C8 | 113.0 (5) |
| C7—O1—H1 | 115 (5) | C10—N1—C11 | 122.3 (6) |
| C1—O3—H3A | 109 (5) | C10—N1—H1A | 119 (4) |
| O6—S1—O5 | 113.5 (3) | C11—N1—H1A | 119 (4) |
| O6—S1—O4 | 111.9 (2) | C13—O7—H7 | 105 (5) |
| O5—S1—O4 | 111.0 (2) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1···O5i | 0.82 (2) | 1.82 (2) | 2.632 (5) | 170 (7) |
| N1—H1A···O2ii | 0.85 (2) | 2.57 (5) | 3.140 (7) | 125 (5) |
| C3—H3···O3ii | 0.93 | 2.51 | 3.379 (7) | 156. |
| O3—H3A···O6iii | 0.82 (2) | 2.57 (5) | 3.140 (5) | 127 (6) |
| O7—H7···O4iv | 0.83 (5) | 1.87 (4) | 2.654 (5) | 155 (8) |
| C10—H10···O8v | 0.93 | 2.46 | 3.152 (8) | 132. |
| C11—H11···O4vi | 0.93 | 2.57 | 3.257 (7) | 131. |
| N1—H1A···O6 | 0.85 (2) | 2.14 (3) | 2.902 (6) | 149 (5) |
| O3—H3A···O2 | 0.82 (2) | 1.90 (4) | 2.626 (5) | 146 (6) |
| C10—H10···O4 | 0.93 | 2.54 | 3.331 (7) | 143. |
Symmetry codes: (i) −x+1/2, −y+1, z−1/2; (ii) −x+1, y−1/2, −z+1/2; (iii) −x+1, y+1/2, −z+1/2; (iv) −x+1, y−1/2, −z+3/2; (v) −x+1, y+1/2, −z+3/2; (vi) x−1/2, −y+1/2, −z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH2633).
References
- Aakeröy, C. B. & Salmon, D. J. (2005). CrystEngComm, 7, 439–448. [DOI] [PMC free article] [PubMed]
- Bruker (2001). SAINT-Plus and SMART Bruker AXS Inc., Madison, Wisconsin, USA.
- Fan, S.-R., Xiao, H.-P. & Zhu, L.-G. (2005). Acta Cryst. E61, o253–o255.
- Flack, H. D. (1983). Acta Cryst. A39, 876–881.
- Meng, X.-G., Xiao, Y.-L., Wang, Z.-L. & Liu, C.-L. (2008). Acta Cryst. C64, o53–o57. [DOI] [PubMed]
- Meng, X.-G., Zhou, C.-S., Wang, L. & Liu, C.-L. (2007). Acta Cryst. C63, o667–o670. [DOI] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Smith, G., Wermuth, U. D. & Healy, P. C. (2006). J. Chem. Crystallogr.36, 841–849.
- Spek, A. L. (2003). J. Appl. Cryst.36, 7–13.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808015882/lh2633sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808015882/lh2633Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


