Abstract
The degradation of atorvastatin calcium in methanol and hydrogen peroxide results in the crystallization of the title compound, C26H24FNO6, which shows several differences compared with the starting compound. In the crystal structure of the title compound, intra- and intermolecular hydrogen bonding is found.
Related literature
For related literature, see: Cremer & Pople (1975 ▶); Rouleau (2005 ▶); United States Pharmacopeia (2007 ▶).
Experimental
Crystal data
C26H24FNO6
M r = 465.46
Monoclinic,
a = 11.7560 (6) Å
b = 11.7489 (6) Å
c = 17.0889 (9) Å
β = 94.438 (2)°
V = 2353.2 (2) Å3
Z = 4
Mo Kα radiation radiation
μ = 0.10 mm−1
T = 296 (2) K
0.25 × 0.18 × 0.15 mm
Data collection
Bruker Kappa APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.975, T max = 0.980
14754 measured reflections
5340 independent reflections
3008 reflections with I > 2σ(I)
R int = 0.040
Refinement
R[F 2 > 2σ(F 2)] = 0.049
wR(F 2) = 0.136
S = 1.02
5340 reflections
318 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.34 e Å−3
Δρmin = −0.28 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2007 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2003 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808022265/nc2108sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808022265/nc2108Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1⋯O3 | 0.86 (2) | 2.36 (2) | 2.780 (2) | 110.8 (17) |
| N1—H1⋯O2i | 0.86 (2) | 2.37 (2) | 3.216 (2) | 168.0 (18) |
| O2—H2⋯O5 | 0.84 (2) | 2.15 (2) | 2.920 (2) | 152 (2) |
| O2—H2⋯O3ii | 0.84 (2) | 2.35 (2) | 2.8188 (18) | 116.1 (18) |
| O5—H5⋯O6 | 0.82 | 1.99 | 2.655 (2) | 138 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
MA gratefully acknowledges the Higher Education Commision, Islamabad, Pakistan, for providing him with a scholaship under the Indigenous PhD Program (PIN 042-120556-PS2-275).
supplementary crystallographic information
Comment
Atorvastatin calcium is widly used as synthetic lipid-lowering agent (Rouleau, 2005). The medicinal organic compounds are affected by the environment in which they are stored and produce degradation products through reactions with moisture (humidity) and oxygen in air (oxidation) or due to thermal shocks. Thus, all the drug substances are given an expiration date which is the time at which 10% of the initial amount of a drug is transformed to various degradation products (United States Pharmacopeia, 2007). Thus it is a standard practice to study the stability profile of a drug substance under stress. In order to simulate the air oxidation under accelerated conditions the products are subjected to the reaction with hydrogen peroxide. The purpose of this study was to see the reaction of atorvastatin calcium towards hydrogen peroxide. In this example, the title compound crystallized after the reaction at ambient temperature.
In the structure of the title compound, the central five-membered ring (O1/C1–C4) is in an envelope conformation, with the C1–C4 atoms in the plane (Fig. 1). The puckering parameters (Cremer & Pople, 1975) are Q = 0.9737 (16)Å, θ = 115.69 (10)° and φ = 0.10 (13)°. The dihedral angles between this ring and benzene rings C6–C11, C12–C17 and C18–C23 are 88.71 (11), 66.85 (11) and 64.39 (12)°, respectively. There is intramolecular O—H···O and N—H···O hydrogen bonding between N1 and O3, between O2 and O5 and between O5 and O6 (Fig. 1 and Table 1). In the crystal structure, the molecules are connected via intermolecular O—H···O and N—H···O hydrogen bonding (Table 1).
Experimental
Atorvastatin calcium (100 mg) was dissolved in methanol (25 ml) at room temperature. A separate solution (10 ml) of hydrogen peroxide (5%) was prepared in distilled water. Both the solutions were mixed togather and set aside for 2 months. The crystals suitable for x-ray diffraction of the title compound (I) were obtained by filteration.
Refinement
The coordinates of H atoms attached with N1 and O2 were refined freely. The remaining H atoms were positioned with idealized geometry (O-H allowed to rotate but not to tip) with C—H = 0.93, 0.96 Å and O—H = 0.82 Å for aromatic, methyl and peroxide H, and were refined using a riding model with Uiso(H) = xUeq(C, N, O), where x = 1.5 for methyl H, and x = 1.2 for all other H atoms.
Figures
Fig. 1.
ORTEP drawing of the title compound, with the atom numbering scheme. The thermal ellipsoids are drawn at the 30% probability level. H-atoms are shown by small circles of arbitrary radii. The dashed lines shows intramolecular H-bonding.
Fig. 2.
The formation of the title compound.
Crystal data
| C26H24FNO6 | F000 = 976 |
| Mr = 465.46 | Dx = 1.314 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation radiation λ = 0.71073 Å |
| Hall symbol: -P 2yn | Cell parameters from 5340 reflections |
| a = 11.7560 (6) Å | θ = 2.0–27.5º |
| b = 11.7489 (6) Å | µ = 0.10 mm−1 |
| c = 17.0889 (9) Å | T = 296 (2) K |
| β = 94.438 (2)º | Prismatic, colorless |
| V = 2353.2 (2) Å3 | 0.25 × 0.18 × 0.15 mm |
| Z = 4 |
Data collection
| Bruker Kappa APEXII CCD diffractometer | 5340 independent reflections |
| Radiation source: fine-focus sealed tube | 3008 reflections with I > 2σ(I) |
| Monochromator: graphite | Rint = 0.040 |
| Detector resolution: 7.50 pixels mm-1 | θmax = 27.5º |
| T = 296(2) K | θmin = 2.0º |
| ω scans | h = −15→14 |
| Absorption correction: multi-scan(SADABS; Bruker, 2005) | k = −15→8 |
| Tmin = 0.975, Tmax = 0.980 | l = −22→21 |
| 14754 measured reflections |
Refinement
| Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| R[F2 > 2σ(F2)] = 0.049 | w = 1/[σ2(Fo2) + (0.0541P)2 + 0.5969P] where P = (Fo2 + 2Fc2)/3 |
| wR(F2) = 0.136 | (Δ/σ)max < 0.001 |
| S = 1.02 | Δρmax = 0.34 e Å−3 |
| 5340 reflections | Δρmin = −0.27 e Å−3 |
| 318 parameters | Extinction correction: emperical, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0032 (7) |
| Secondary atom site location: difference Fourier map |
Special details
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| F1 | 0.7275 (2) | 0.00876 (18) | −0.10244 (10) | 0.1428 (12) | |
| O1 | 0.91061 (11) | 0.21012 (11) | 0.21795 (7) | 0.0426 (5) | |
| O2 | 0.78009 (12) | 0.35021 (11) | 0.17484 (8) | 0.0455 (5) | |
| O3 | 0.75203 (11) | 0.07280 (10) | 0.26940 (7) | 0.0383 (4) | |
| O4 | 0.96555 (12) | 0.28576 (11) | 0.34067 (8) | 0.0512 (5) | |
| O5 | 0.88438 (14) | 0.38004 (12) | 0.33419 (9) | 0.0591 (6) | |
| O6 | 0.78216 (14) | 0.25802 (13) | 0.43917 (8) | 0.0622 (6) | |
| N1 | 0.70884 (15) | 0.07964 (14) | 0.42697 (10) | 0.0428 (6) | |
| C1 | 0.79736 (16) | 0.23366 (15) | 0.18667 (11) | 0.0373 (6) | |
| C2 | 0.72161 (16) | 0.18934 (14) | 0.24910 (11) | 0.0361 (6) | |
| C3 | 0.79830 (16) | 0.16319 (15) | 0.31885 (11) | 0.0362 (6) | |
| C4 | 0.91978 (17) | 0.19004 (16) | 0.30000 (11) | 0.0398 (6) | |
| C5 | 0.76193 (17) | 0.17068 (16) | 0.40107 (11) | 0.0426 (7) | |
| C6 | 0.66547 (17) | 0.06482 (18) | 0.50124 (11) | 0.0430 (7) | |
| C7 | 0.64405 (19) | −0.0442 (2) | 0.52493 (13) | 0.0545 (8) | |
| C8 | 0.5989 (2) | −0.0630 (3) | 0.59596 (16) | 0.0742 (10) | |
| C9 | 0.5747 (2) | 0.0265 (3) | 0.64262 (15) | 0.0848 (13) | |
| C10 | 0.5957 (3) | 0.1338 (3) | 0.61935 (17) | 0.0905 (14) | |
| C11 | 0.6417 (2) | 0.1550 (2) | 0.54889 (15) | 0.0731 (10) | |
| C12 | 0.60000 (17) | 0.22332 (16) | 0.24931 (12) | 0.0432 (7) | |
| C13 | 0.56860 (19) | 0.31146 (18) | 0.29682 (14) | 0.0535 (8) | |
| C14 | 0.4566 (2) | 0.3464 (2) | 0.29578 (17) | 0.0691 (10) | |
| C15 | 0.3765 (2) | 0.2949 (2) | 0.2464 (2) | 0.0809 (13) | |
| C16 | 0.4051 (2) | 0.2077 (3) | 0.1996 (2) | 0.0851 (13) | |
| C17 | 0.5172 (2) | 0.1703 (2) | 0.20123 (15) | 0.0634 (9) | |
| C18 | 0.77882 (17) | 0.17385 (16) | 0.10816 (11) | 0.0417 (7) | |
| C19 | 0.6918 (2) | 0.2070 (2) | 0.05454 (13) | 0.0628 (9) | |
| C20 | 0.6729 (3) | 0.1504 (3) | −0.01611 (15) | 0.0865 (13) | |
| C21 | 0.7429 (3) | 0.0629 (3) | −0.03176 (16) | 0.0877 (13) | |
| C22 | 0.8274 (3) | 0.0266 (2) | 0.01933 (17) | 0.0858 (13) | |
| C23 | 0.8452 (2) | 0.08283 (19) | 0.09060 (14) | 0.0633 (9) | |
| C24 | 1.00575 (18) | 0.09376 (19) | 0.31729 (13) | 0.0483 (8) | |
| C25 | 1.1220 (2) | 0.1214 (2) | 0.28961 (16) | 0.0707 (10) | |
| C26 | 1.0152 (2) | 0.0571 (2) | 0.40307 (14) | 0.0725 (10) | |
| H1 | 0.7025 (18) | 0.0224 (18) | 0.3959 (12) | 0.0513* | |
| H2 | 0.7978 (19) | 0.3806 (18) | 0.2186 (13) | 0.0546* | |
| H5 | 0.84238 | 0.37658 | 0.37026 | 0.0709* | |
| H7 | 0.65998 | −0.10545 | 0.49308 | 0.0653* | |
| H8 | 0.58498 | −0.13698 | 0.61205 | 0.0891* | |
| H9 | 0.54382 | 0.01370 | 0.69032 | 0.1016* | |
| H10 | 0.57890 | 0.19449 | 0.65141 | 0.1082* | |
| H11 | 0.65640 | 0.22924 | 0.53375 | 0.0877* | |
| H13 | 0.62383 | 0.34762 | 0.32991 | 0.0642* | |
| H14 | 0.43608 | 0.40471 | 0.32866 | 0.0830* | |
| H15 | 0.30121 | 0.31969 | 0.24457 | 0.0971* | |
| H16 | 0.34924 | 0.17291 | 0.16623 | 0.1022* | |
| H17 | 0.53617 | 0.10956 | 0.16989 | 0.0761* | |
| H19 | 0.64536 | 0.26790 | 0.06595 | 0.0754* | |
| H20 | 0.61343 | 0.17187 | −0.05218 | 0.1038* | |
| H22 | 0.87298 | −0.03469 | 0.00730 | 0.1031* | |
| H23 | 0.90295 | 0.05841 | 0.12698 | 0.0760* | |
| H24 | 0.9756 (19) | 0.0315 (18) | 0.2877 (12) | 0.0580* | |
| H25A | 1.17269 | 0.05848 | 0.30093 | 0.1061* | |
| H25B | 1.15192 | 0.18810 | 0.31628 | 0.1061* | |
| H25C | 1.11487 | 0.13507 | 0.23406 | 0.1061* | |
| H26A | 1.06946 | −0.00373 | 0.41036 | 0.1087* | |
| H26B | 0.94205 | 0.03156 | 0.41737 | 0.1087* | |
| H26C | 1.03999 | 0.12047 | 0.43554 | 0.1087* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| F1 | 0.231 (3) | 0.1278 (16) | 0.0649 (12) | −0.0243 (16) | −0.0177 (13) | −0.0448 (11) |
| O1 | 0.0387 (8) | 0.0528 (8) | 0.0357 (8) | −0.0054 (6) | −0.0016 (6) | 0.0093 (6) |
| O2 | 0.0619 (10) | 0.0324 (7) | 0.0409 (8) | −0.0028 (6) | −0.0034 (7) | 0.0037 (6) |
| O3 | 0.0471 (8) | 0.0307 (6) | 0.0361 (7) | −0.0042 (6) | −0.0036 (6) | 0.0030 (5) |
| O4 | 0.0506 (9) | 0.0456 (8) | 0.0549 (9) | −0.0083 (7) | −0.0120 (7) | −0.0004 (7) |
| O5 | 0.0700 (11) | 0.0434 (8) | 0.0632 (11) | −0.0068 (8) | 0.0008 (8) | −0.0020 (7) |
| O6 | 0.0906 (12) | 0.0504 (9) | 0.0464 (9) | −0.0176 (8) | 0.0105 (8) | −0.0098 (7) |
| N1 | 0.0522 (11) | 0.0422 (9) | 0.0347 (10) | −0.0061 (8) | 0.0080 (8) | −0.0016 (7) |
| C1 | 0.0396 (12) | 0.0348 (10) | 0.0362 (11) | −0.0016 (8) | −0.0044 (8) | 0.0063 (8) |
| C2 | 0.0416 (12) | 0.0293 (9) | 0.0364 (11) | −0.0029 (8) | −0.0024 (8) | 0.0022 (8) |
| C3 | 0.0414 (11) | 0.0322 (9) | 0.0339 (11) | −0.0048 (8) | −0.0032 (8) | 0.0015 (8) |
| C4 | 0.0437 (12) | 0.0412 (10) | 0.0329 (11) | −0.0068 (9) | −0.0064 (9) | 0.0042 (8) |
| C5 | 0.0492 (12) | 0.0423 (11) | 0.0357 (11) | −0.0021 (9) | −0.0004 (9) | 0.0002 (9) |
| C6 | 0.0379 (12) | 0.0577 (12) | 0.0334 (11) | −0.0021 (10) | 0.0024 (9) | 0.0001 (10) |
| C7 | 0.0486 (13) | 0.0631 (14) | 0.0525 (14) | 0.0022 (11) | 0.0090 (11) | 0.0138 (11) |
| C8 | 0.0561 (16) | 0.103 (2) | 0.0640 (17) | −0.0041 (14) | 0.0080 (13) | 0.0336 (16) |
| C9 | 0.0597 (18) | 0.156 (3) | 0.0398 (15) | −0.0171 (19) | 0.0110 (12) | 0.0042 (18) |
| C10 | 0.087 (2) | 0.124 (3) | 0.0645 (19) | −0.0228 (19) | 0.0319 (16) | −0.0354 (18) |
| C11 | 0.0829 (19) | 0.0770 (17) | 0.0628 (17) | −0.0140 (14) | 0.0274 (14) | −0.0194 (14) |
| C12 | 0.0416 (12) | 0.0378 (10) | 0.0497 (12) | −0.0045 (9) | −0.0002 (10) | 0.0081 (9) |
| C13 | 0.0451 (14) | 0.0472 (12) | 0.0682 (16) | 0.0003 (10) | 0.0045 (11) | 0.0015 (11) |
| C14 | 0.0549 (16) | 0.0530 (14) | 0.101 (2) | 0.0052 (12) | 0.0171 (15) | 0.0081 (13) |
| C15 | 0.0405 (15) | 0.0652 (17) | 0.137 (3) | 0.0015 (13) | 0.0072 (16) | 0.0209 (18) |
| C16 | 0.0458 (16) | 0.0774 (19) | 0.128 (3) | −0.0130 (14) | −0.0190 (16) | −0.0045 (18) |
| C17 | 0.0509 (15) | 0.0561 (14) | 0.0810 (18) | −0.0072 (12) | −0.0098 (12) | −0.0047 (12) |
| C18 | 0.0531 (13) | 0.0367 (10) | 0.0343 (11) | −0.0045 (9) | −0.0031 (9) | 0.0058 (8) |
| C19 | 0.0784 (18) | 0.0555 (14) | 0.0507 (14) | 0.0011 (12) | −0.0196 (12) | 0.0020 (11) |
| C20 | 0.120 (3) | 0.080 (2) | 0.0526 (17) | −0.0065 (18) | −0.0373 (16) | −0.0018 (14) |
| C21 | 0.142 (3) | 0.0704 (19) | 0.0476 (16) | −0.0215 (19) | −0.0116 (18) | −0.0167 (14) |
| C22 | 0.126 (3) | 0.0653 (17) | 0.0657 (19) | 0.0120 (17) | 0.0044 (18) | −0.0192 (14) |
| C23 | 0.0869 (19) | 0.0527 (13) | 0.0489 (14) | 0.0085 (13) | −0.0044 (12) | −0.0052 (11) |
| C24 | 0.0447 (13) | 0.0498 (12) | 0.0488 (14) | 0.0012 (10) | −0.0073 (10) | 0.0072 (10) |
| C25 | 0.0432 (14) | 0.0843 (18) | 0.0840 (19) | 0.0059 (12) | 0.0013 (13) | 0.0167 (14) |
| C26 | 0.0714 (17) | 0.0825 (18) | 0.0613 (16) | 0.0128 (14) | −0.0092 (13) | 0.0265 (13) |
Geometric parameters (Å, °)
| F1—C21 | 1.365 (3) | C15—C16 | 1.358 (4) |
| O1—C1 | 1.423 (2) | C16—C17 | 1.387 (3) |
| O1—C4 | 1.418 (2) | C18—C19 | 1.376 (3) |
| O2—C1 | 1.397 (2) | C18—C23 | 1.371 (3) |
| O3—C2 | 1.450 (2) | C19—C20 | 1.381 (4) |
| O3—C3 | 1.438 (2) | C20—C21 | 1.356 (5) |
| O4—O5 | 1.461 (2) | C21—C22 | 1.340 (5) |
| O4—C4 | 1.407 (2) | C22—C23 | 1.387 (4) |
| O6—C5 | 1.229 (2) | C24—C25 | 1.516 (3) |
| O2—H2 | 0.84 (2) | C24—C26 | 1.524 (3) |
| O5—H5 | 0.8200 | C7—H7 | 0.9300 |
| N1—C5 | 1.331 (3) | C8—H8 | 0.9300 |
| N1—C6 | 1.415 (3) | C9—H9 | 0.9300 |
| N1—H1 | 0.86 (2) | C10—H10 | 0.9300 |
| C1—C18 | 1.515 (3) | C11—H11 | 0.9300 |
| C1—C2 | 1.533 (3) | C13—H13 | 0.9300 |
| C2—C3 | 1.470 (3) | C14—H14 | 0.9300 |
| C2—C12 | 1.485 (3) | C15—H15 | 0.9300 |
| C3—C4 | 1.521 (3) | C16—H16 | 0.9300 |
| C3—C5 | 1.503 (3) | C17—H17 | 0.9300 |
| C4—C24 | 1.530 (3) | C19—H19 | 0.9300 |
| C6—C11 | 1.378 (3) | C20—H20 | 0.9300 |
| C6—C7 | 1.373 (3) | C22—H22 | 0.9300 |
| C7—C8 | 1.380 (3) | C23—H23 | 0.9300 |
| C8—C9 | 1.363 (5) | C24—H24 | 0.94 (2) |
| C9—C10 | 1.350 (5) | C25—H25A | 0.9600 |
| C10—C11 | 1.380 (4) | C25—H25B | 0.9600 |
| C12—C17 | 1.374 (3) | C25—H25C | 0.9600 |
| C12—C13 | 1.384 (3) | C26—H26A | 0.9600 |
| C13—C14 | 1.378 (3) | C26—H26B | 0.9600 |
| C14—C15 | 1.357 (4) | C26—H26C | 0.9600 |
| C1—O1—C4 | 113.66 (14) | C18—C19—C20 | 120.5 (2) |
| C2—O3—C3 | 61.20 (11) | C19—C20—C21 | 118.6 (3) |
| O5—O4—C4 | 110.25 (14) | F1—C21—C20 | 119.1 (3) |
| C1—O2—H2 | 105.3 (14) | F1—C21—C22 | 118.0 (3) |
| O4—O5—H5 | 109.00 | C20—C21—C22 | 122.9 (3) |
| C5—N1—C6 | 127.44 (17) | C21—C22—C23 | 118.3 (3) |
| C5—N1—H1 | 116.4 (14) | C18—C23—C22 | 120.9 (2) |
| C6—N1—H1 | 116.1 (14) | C4—C24—C26 | 113.12 (18) |
| O1—C1—C2 | 104.45 (14) | C25—C24—C26 | 111.13 (19) |
| O1—C1—C18 | 107.99 (15) | C4—C24—C25 | 112.29 (18) |
| O1—C1—O2 | 111.48 (15) | C6—C7—H7 | 120.00 |
| O2—C1—C2 | 110.37 (15) | C8—C7—H7 | 120.00 |
| O2—C1—C18 | 108.49 (15) | C7—C8—H8 | 120.00 |
| C2—C1—C18 | 114.03 (15) | C9—C8—H8 | 120.00 |
| O3—C2—C3 | 58.97 (11) | C8—C9—H9 | 120.00 |
| O3—C2—C12 | 118.22 (15) | C10—C9—H9 | 120.00 |
| C1—C2—C3 | 106.41 (15) | C9—C10—H10 | 119.00 |
| O3—C2—C1 | 109.96 (14) | C11—C10—H10 | 119.00 |
| C1—C2—C12 | 121.45 (16) | C6—C11—H11 | 120.00 |
| C3—C2—C12 | 125.76 (17) | C10—C11—H11 | 120.00 |
| O3—C3—C5 | 118.09 (15) | C12—C13—H13 | 120.00 |
| C4—C3—C5 | 121.71 (16) | C14—C13—H13 | 120.00 |
| C2—C3—C4 | 108.17 (15) | C13—C14—H14 | 120.00 |
| C2—C3—C5 | 123.01 (16) | C15—C14—H14 | 120.00 |
| O3—C3—C2 | 59.83 (11) | C14—C15—H15 | 120.00 |
| O3—C3—C4 | 110.33 (15) | C16—C15—H15 | 120.00 |
| O4—C4—C24 | 105.89 (16) | C15—C16—H16 | 120.00 |
| C3—C4—C24 | 115.00 (16) | C17—C16—H16 | 120.00 |
| O1—C4—C24 | 108.21 (16) | C12—C17—H17 | 120.00 |
| O1—C4—O4 | 110.64 (15) | C16—C17—H17 | 120.00 |
| O1—C4—C3 | 104.07 (15) | C18—C19—H19 | 120.00 |
| O4—C4—C3 | 112.99 (15) | C20—C19—H19 | 120.00 |
| O6—C5—N1 | 124.85 (18) | C19—C20—H20 | 121.00 |
| N1—C5—C3 | 116.01 (16) | C21—C20—H20 | 121.00 |
| O6—C5—C3 | 119.15 (17) | C21—C22—H22 | 121.00 |
| N1—C6—C11 | 122.63 (19) | C23—C22—H22 | 121.00 |
| C7—C6—C11 | 119.54 (19) | C18—C23—H23 | 120.00 |
| N1—C6—C7 | 117.81 (18) | C22—C23—H23 | 120.00 |
| C6—C7—C8 | 120.1 (2) | C4—C24—H24 | 104.8 (14) |
| C7—C8—C9 | 120.2 (3) | C25—C24—H24 | 108.0 (14) |
| C8—C9—C10 | 119.8 (3) | C26—C24—H24 | 107.0 (13) |
| C9—C10—C11 | 121.2 (3) | C24—C25—H25A | 109.00 |
| C6—C11—C10 | 119.2 (2) | C24—C25—H25B | 109.00 |
| C2—C12—C13 | 120.23 (18) | C24—C25—H25C | 109.00 |
| C2—C12—C17 | 120.97 (18) | H25A—C25—H25B | 110.00 |
| C13—C12—C17 | 118.8 (2) | H25A—C25—H25C | 109.00 |
| C12—C13—C14 | 120.9 (2) | H25B—C25—H25C | 109.00 |
| C13—C14—C15 | 119.4 (2) | C24—C26—H26A | 109.00 |
| C14—C15—C16 | 120.7 (2) | C24—C26—H26B | 109.00 |
| C15—C16—C17 | 120.4 (3) | C24—C26—H26C | 109.00 |
| C12—C17—C16 | 119.8 (2) | H26A—C26—H26B | 109.00 |
| C19—C18—C23 | 118.79 (19) | H26A—C26—H26C | 109.00 |
| C1—C18—C19 | 120.47 (18) | H26B—C26—H26C | 109.00 |
| C1—C18—C23 | 120.69 (18) | ||
| C4—O1—C1—O2 | 100.71 (17) | O3—C3—C4—O4 | 173.71 (14) |
| C4—O1—C1—C2 | −18.48 (18) | O3—C3—C4—C24 | −64.6 (2) |
| C4—O1—C1—C18 | −140.20 (15) | C2—C3—C4—O1 | −10.10 (19) |
| C1—O1—C4—O4 | −103.48 (17) | C2—C3—C4—O4 | 109.97 (17) |
| C1—O1—C4—C3 | 18.17 (19) | C2—C3—C4—C24 | −128.29 (17) |
| C1—O1—C4—C24 | 140.93 (16) | C5—C3—C4—O1 | −161.36 (16) |
| C3—O3—C2—C1 | 97.59 (16) | C5—C3—C4—O4 | −41.3 (2) |
| C3—O3—C2—C12 | −116.82 (19) | C5—C3—C4—C24 | 80.5 (2) |
| C2—O3—C3—C4 | −99.75 (16) | O3—C3—C5—O6 | −166.15 (17) |
| C2—O3—C3—C5 | 113.84 (19) | O3—C3—C5—N1 | 13.7 (3) |
| O5—O4—C4—O1 | 68.46 (18) | C2—C3—C5—O6 | −95.6 (2) |
| O5—O4—C4—C3 | −47.78 (19) | C2—C3—C5—N1 | 84.3 (2) |
| O5—O4—C4—C24 | −174.52 (14) | C4—C3—C5—O6 | 51.4 (3) |
| C6—N1—C5—O6 | 0.3 (3) | C4—C3—C5—N1 | −128.75 (19) |
| C6—N1—C5—C3 | −179.54 (18) | O1—C4—C24—C25 | 58.3 (2) |
| C5—N1—C6—C7 | −161.4 (2) | O1—C4—C24—C26 | −174.90 (17) |
| C5—N1—C6—C11 | 20.3 (3) | O4—C4—C24—C25 | −60.3 (2) |
| O1—C1—C2—O3 | −51.65 (17) | O4—C4—C24—C26 | 66.5 (2) |
| O1—C1—C2—C3 | 10.65 (18) | C3—C4—C24—C25 | 174.17 (18) |
| O1—C1—C2—C12 | 164.07 (15) | C3—C4—C24—C26 | −59.1 (2) |
| O2—C1—C2—O3 | −171.59 (14) | N1—C6—C7—C8 | −178.3 (2) |
| O2—C1—C2—C3 | −109.29 (16) | C11—C6—C7—C8 | 0.1 (3) |
| O2—C1—C2—C12 | 44.1 (2) | N1—C6—C11—C10 | 177.7 (2) |
| C18—C1—C2—O3 | 66.0 (2) | C7—C6—C11—C10 | −0.6 (4) |
| C18—C1—C2—C3 | 128.30 (16) | C6—C7—C8—C9 | 0.4 (4) |
| C18—C1—C2—C12 | −78.3 (2) | C7—C8—C9—C10 | −0.4 (4) |
| O1—C1—C18—C19 | −160.88 (18) | C8—C9—C10—C11 | −0.1 (4) |
| O1—C1—C18—C23 | 21.9 (2) | C9—C10—C11—C6 | 0.6 (4) |
| O2—C1—C18—C19 | −39.9 (2) | C2—C12—C13—C14 | 177.9 (2) |
| O2—C1—C18—C23 | 142.86 (19) | C17—C12—C13—C14 | −0.5 (3) |
| C2—C1—C18—C19 | 83.5 (2) | C2—C12—C17—C16 | −176.6 (2) |
| C2—C1—C18—C23 | −93.7 (2) | C13—C12—C17—C16 | 1.7 (4) |
| O3—C2—C3—C4 | 103.43 (15) | C12—C13—C14—C15 | −1.2 (4) |
| O3—C2—C3—C5 | −105.77 (18) | C13—C14—C15—C16 | 1.7 (4) |
| C1—C2—C3—O3 | −103.78 (15) | C14—C15—C16—C17 | −0.4 (5) |
| C1—C2—C3—C4 | −0.35 (19) | C15—C16—C17—C12 | −1.3 (4) |
| C1—C2—C3—C5 | 150.45 (16) | C1—C18—C19—C20 | −178.2 (2) |
| C12—C2—C3—O3 | 104.29 (19) | C23—C18—C19—C20 | −0.9 (3) |
| C12—C2—C3—C4 | −152.28 (17) | C1—C18—C23—C22 | 179.0 (2) |
| C12—C2—C3—C5 | −1.5 (3) | C19—C18—C23—C22 | 1.7 (3) |
| O3—C2—C12—C13 | 121.7 (2) | C18—C19—C20—C21 | −1.0 (4) |
| O3—C2—C12—C17 | −60.0 (3) | C19—C20—C21—F1 | −177.8 (3) |
| C1—C2—C12—C13 | −96.8 (2) | C19—C20—C21—C22 | 2.2 (5) |
| C1—C2—C12—C17 | 81.5 (2) | F1—C21—C22—C23 | 178.6 (3) |
| C3—C2—C12—C13 | 51.3 (3) | C20—C21—C22—C23 | −1.4 (5) |
| C3—C2—C12—C17 | −130.4 (2) | C21—C22—C23—C18 | −0.6 (4) |
| O3—C3—C4—O1 | 53.64 (18) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1···O3 | 0.86 (2) | 2.36 (2) | 2.780 (2) | 110.8 (17) |
| N1—H1···O2i | 0.86 (2) | 2.37 (2) | 3.216 (2) | 168.0 (18) |
| O2—H2···O5 | 0.84 (2) | 2.15 (2) | 2.920 (2) | 152 (2) |
| O2—H2···O3ii | 0.84 (2) | 2.35 (2) | 2.8188 (18) | 116.1 (18) |
| O5—H5···O6 | 0.8200 | 1.9900 | 2.655 (2) | 138.00 |
Symmetry codes: (i) −x+3/2, y−1/2, −z+1/2; (ii) −x+3/2, y+1/2, −z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: NC2108).
References
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- Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc.97, 1354–1358.
- Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
- Farrugia, L. J. (1999). J. Appl. Cryst.32, 837–838.
- United States Pharmacopeia (2007). United States Pharmacopoeia, 2nd ed. Rockville: United States Pharmacopial Convention.
- Rouleau, J. (2005). Am. J. Med.118 (Suppl. 12A), 28–35. [DOI] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2003). J. Appl. Cryst.36, 7–13.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808022265/nc2108sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808022265/nc2108Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


