Abstract
In the title compound, C16H13NO3S, the plane of the naphthalene ring system forms a dihedral angle of 64.66 (10)° with the benzene ring. The molecular structure is stabilized by weak intramolecular C—H⋯O interactions and the crystal packing is stabilized by weak intermolecular N—H⋯O and C—H⋯O interactions and by π–π stacking interactions of the inversion-related naphthalene units [centroid–centroid distance of 3.7373 (14) Å].
Related literature
For the structures of closely related compounds, see: Manivannan et al. (2005a
▶,b
▶); Ramachandran et al.(2007 ▶); Vennila et al. (2008 ▶). For applications, see: Spungin et al. (1984 ▶); Yachi et al. (1989 ▶).
Experimental
Crystal data
C16H13NO3S
M r = 299.33
Monoclinic,
a = 8.4558 (2) Å
b = 8.6712 (3) Å
c = 19.5915 (6) Å
β = 100.321 (2)°
V = 1413.24 (7) Å3
Z = 4
Mo Kα radiation
μ = 0.24 mm−1
T = 295 (2) K
0.30 × 0.25 × 0.20 mm
Data collection
Bruker Kappa APEXII diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.932, T max = 0.954
19808 measured reflections
4981 independent reflections
3126 reflections with I > 2σ(I)
R int = 0.023
Refinement
R[F 2 > 2σ(F 2)] = 0.055
wR(F 2) = 0.174
S = 1.05
4981 reflections
190 parameters
H-atom parameters constrained
Δρmax = 0.46 e Å−3
Δρmin = −0.44 e Å−3
Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808041032/gk2179sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808041032/gk2179Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C2—H2⋯O2 | 0.93 | 2.41 | 2.829 (3) | 107 |
| C9—H9⋯O3 | 0.93 | 2.56 | 3.127 (3) | 120 |
| N1—H1B⋯O3i | 0.86 | 2.43 | 3.246 (3) | 158 |
| C7—H7⋯O2ii | 0.93 | 2.56 | 3.422 (3) | 154 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
The authors acknowledge the Sophisticated Analytical Instrument Facility, Indian Institute of Technology, Madras, for the data collection.
supplementary crystallographic information
Comment
Several compounds containing the para-toluene sulfonate moiety are used in the fields of biology and industry. The merging of lipids can be monitored using a derivative of para-toluene sulfonate (Yachi et al., 1989). This method has been used in studying the membrane fusion during the acrosome reaction (Spungin et al., 1984).
The plane of the benzene ring forms a dihedral angle of 64.66 (10) ° with the naphthalene ring system. The torsion angles O2—S1—C1—C2 and O3—S1—C1—C10 [5.58 (17) ° and 52.09 (16) °, respectively] indicate the syn conformation of sulfonyl moiety. The molecular structure is stabilized by weak intramolecular C—H···O interactions and the crystal packing is stabilized by weak intermolecular C—H···O interactions, N—H···O interactions and π-π stacking interactions of the naphthalene fragments related by inversion center
Experimental
1-Napthalene sulfonyl chloride (5 mmol) dissolved in acetone (4 ml) was added dropwise to 3-amino phenol (5 mmol) in aqueous NaOH (4 ml, 5%) with constant shaking. The precipitated compound (3 mmol, yield 60%) was recrystlized from ethanol to get diffraction quality brown colored crystals.
Refinement
H atoms were positioned geometrically and refined using riding model with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic C—H and N—H = 0.86 Å and Uiso(H) = 1.2Ueq(N) for N—H.
Figures
Fig. 1.
The molecular structure of the title compound, with atom labels and 50% probability displacement ellipsoids for non-H atoms.
Fig. 2.
The packing viewed down the b axis. Hydrogen bonds are shown as dashed lines. H atoms not involved in hydrogen bonding have been omitted.
Crystal data
| C16H13NO3S | F(000) = 624 |
| Mr = 299.33 | Dx = 1.407 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 4818 reflections |
| a = 8.4558 (2) Å | θ = 2.2–25.4° |
| b = 8.6712 (3) Å | µ = 0.24 mm−1 |
| c = 19.5915 (6) Å | T = 295 K |
| β = 100.321 (2)° | Block, brown |
| V = 1413.24 (7) Å3 | 0.30 × 0.25 × 0.20 mm |
| Z = 4 |
Data collection
| Bruker Kappa APEX2 diffractometer | 4981 independent reflections |
| Radiation source: fine-focus sealed tube | 3126 reflections with I > 2σ(I) |
| graphite | Rint = 0.023 |
| ω and φ scans | θmax = 32.2°, θmin = 2.1° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −12→10 |
| Tmin = 0.932, Tmax = 0.954 | k = −12→11 |
| 19808 measured reflections | l = −21→29 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.055 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.174 | H-atom parameters constrained |
| S = 1.05 | w = 1/[σ2(Fo2) + (0.0763P)2 + 0.3485P] where P = (Fo2 + 2Fc2)/3 |
| 4981 reflections | (Δ/σ)max < 0.001 |
| 190 parameters | Δρmax = 0.46 e Å−3 |
| 0 restraints | Δρmin = −0.44 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.34222 (19) | 0.8581 (2) | 0.10826 (8) | 0.0475 (4) | |
| C2 | 0.2573 (3) | 0.9698 (3) | 0.13547 (12) | 0.0688 (6) | |
| H2 | 0.2543 | 0.9701 | 0.1827 | 0.083* | |
| C3 | 0.1749 (3) | 1.0837 (3) | 0.09239 (19) | 0.0876 (8) | |
| H3 | 0.1173 | 1.1596 | 0.1109 | 0.105* | |
| C4 | 0.1793 (3) | 1.0828 (3) | 0.02504 (18) | 0.0858 (8) | |
| H4 | 0.1241 | 1.1593 | −0.0029 | 0.103* | |
| C5 | 0.2639 (2) | 0.9713 (2) | −0.00569 (11) | 0.0634 (5) | |
| C6 | 0.2687 (4) | 0.9715 (4) | −0.07762 (13) | 0.0910 (9) | |
| H6 | 0.2122 | 1.0468 | −0.1058 | 0.109* | |
| C7 | 0.3515 (4) | 0.8673 (4) | −0.10559 (13) | 0.1015 (12) | |
| H7 | 0.3537 | 0.8711 | −0.1529 | 0.122* | |
| C8 | 0.4342 (4) | 0.7536 (3) | −0.06564 (14) | 0.0872 (9) | |
| H8 | 0.4913 | 0.6808 | −0.0863 | 0.105* | |
| C9 | 0.4342 (2) | 0.7451 (2) | 0.00414 (11) | 0.0619 (5) | |
| H9 | 0.4904 | 0.6666 | 0.0303 | 0.074* | |
| C10 | 0.34948 (19) | 0.85482 (19) | 0.03643 (8) | 0.0458 (4) | |
| C11 | 0.21070 (19) | 0.52112 (19) | 0.14424 (9) | 0.0466 (4) | |
| C12 | 0.0822 (2) | 0.5617 (2) | 0.09445 (10) | 0.0595 (5) | |
| H12 | 0.0949 | 0.6176 | 0.0553 | 0.071* | |
| C13 | −0.0674 (2) | 0.5150 (3) | 0.10555 (12) | 0.0696 (6) | |
| H13 | −0.1582 | 0.5414 | 0.0734 | 0.084* | |
| C14 | −0.0850 (2) | 0.4309 (2) | 0.16279 (11) | 0.0637 (5) | |
| H14 | −0.1874 | 0.4025 | 0.1692 | 0.076* | |
| C15 | 0.0471 (2) | 0.3876 (2) | 0.21112 (10) | 0.0561 (4) | |
| C16 | 0.1979 (2) | 0.4357 (2) | 0.20153 (9) | 0.0511 (4) | |
| H16 | 0.2890 | 0.4101 | 0.2336 | 0.061* | |
| O1 | 0.36734 (15) | 0.56180 (15) | 0.13433 (7) | 0.0580 (3) | |
| O2 | 0.3993 (2) | 0.7447 (2) | 0.23185 (7) | 0.0915 (6) | |
| O3 | 0.60456 (18) | 0.7106 (2) | 0.15880 (10) | 0.0903 (6) | |
| N1 | 0.0316 (3) | 0.3014 (3) | 0.26868 (11) | 0.0868 (6) | |
| H1A | −0.0621 | 0.2733 | 0.2752 | 0.104* | |
| H1B | 0.1156 | 0.2758 | 0.2981 | 0.104* | |
| S1 | 0.44040 (6) | 0.72128 (7) | 0.16539 (2) | 0.06166 (18) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0464 (8) | 0.0490 (9) | 0.0497 (8) | −0.0131 (7) | 0.0153 (6) | −0.0086 (7) |
| C2 | 0.0679 (12) | 0.0677 (13) | 0.0789 (13) | −0.0188 (10) | 0.0346 (10) | −0.0268 (11) |
| C3 | 0.0697 (14) | 0.0536 (13) | 0.144 (3) | 0.0011 (10) | 0.0312 (15) | −0.0233 (15) |
| C4 | 0.0699 (14) | 0.0511 (12) | 0.130 (2) | −0.0040 (10) | 0.0007 (14) | 0.0086 (14) |
| C5 | 0.0621 (11) | 0.0556 (11) | 0.0683 (12) | −0.0236 (9) | 0.0003 (9) | 0.0073 (9) |
| C6 | 0.1060 (19) | 0.0930 (19) | 0.0634 (13) | −0.0531 (16) | −0.0135 (13) | 0.0241 (13) |
| C7 | 0.136 (3) | 0.118 (2) | 0.0525 (13) | −0.082 (2) | 0.0230 (15) | −0.0135 (15) |
| C8 | 0.1037 (19) | 0.0958 (19) | 0.0737 (14) | −0.0525 (16) | 0.0469 (14) | −0.0426 (14) |
| C9 | 0.0619 (11) | 0.0660 (12) | 0.0638 (11) | −0.0206 (9) | 0.0276 (9) | −0.0226 (9) |
| C10 | 0.0451 (8) | 0.0451 (8) | 0.0482 (8) | −0.0160 (6) | 0.0112 (6) | −0.0062 (6) |
| C11 | 0.0461 (8) | 0.0416 (8) | 0.0523 (9) | −0.0039 (6) | 0.0095 (6) | −0.0014 (7) |
| C12 | 0.0603 (10) | 0.0606 (11) | 0.0536 (10) | −0.0068 (9) | −0.0006 (8) | 0.0050 (8) |
| C13 | 0.0519 (10) | 0.0769 (14) | 0.0725 (13) | −0.0074 (9) | −0.0091 (9) | −0.0047 (11) |
| C14 | 0.0522 (10) | 0.0598 (11) | 0.0798 (13) | −0.0175 (8) | 0.0139 (9) | −0.0150 (10) |
| C15 | 0.0643 (10) | 0.0438 (9) | 0.0640 (11) | −0.0099 (8) | 0.0214 (9) | −0.0058 (8) |
| C16 | 0.0524 (9) | 0.0452 (9) | 0.0546 (9) | −0.0002 (7) | 0.0068 (7) | 0.0035 (7) |
| O1 | 0.0501 (6) | 0.0556 (7) | 0.0704 (8) | −0.0023 (5) | 0.0165 (6) | 0.0074 (6) |
| O2 | 0.1164 (14) | 0.1138 (14) | 0.0419 (7) | −0.0494 (11) | 0.0078 (8) | −0.0014 (8) |
| O3 | 0.0456 (8) | 0.1086 (14) | 0.1099 (14) | −0.0144 (8) | −0.0046 (8) | 0.0307 (11) |
| N1 | 0.0905 (14) | 0.0891 (15) | 0.0865 (14) | −0.0159 (11) | 0.0316 (11) | 0.0238 (11) |
| S1 | 0.0536 (3) | 0.0762 (4) | 0.0524 (3) | −0.0199 (2) | 0.00177 (19) | 0.0072 (2) |
Geometric parameters (Å, °)
| C1—C2 | 1.370 (3) | C9—H9 | 0.9300 |
| C1—C10 | 1.420 (2) | C11—C16 | 1.365 (2) |
| C1—S1 | 1.7368 (19) | C11—C12 | 1.370 (2) |
| C2—C3 | 1.401 (4) | C11—O1 | 1.4173 (19) |
| C2—H2 | 0.9300 | C12—C13 | 1.382 (3) |
| C3—C4 | 1.327 (4) | C12—H12 | 0.9300 |
| C3—H3 | 0.9300 | C13—C14 | 1.368 (3) |
| C4—C5 | 1.401 (4) | C13—H13 | 0.9300 |
| C4—H4 | 0.9300 | C14—C15 | 1.381 (3) |
| C5—C6 | 1.417 (3) | C14—H14 | 0.9300 |
| C5—C10 | 1.418 (3) | C15—N1 | 1.378 (3) |
| C6—C7 | 1.321 (5) | C15—C16 | 1.386 (2) |
| C6—H6 | 0.9300 | C16—H16 | 0.9300 |
| C7—C8 | 1.370 (5) | O1—S1 | 1.5905 (14) |
| C7—H7 | 0.9300 | O2—S1 | 1.4212 (16) |
| C8—C9 | 1.369 (3) | O3—S1 | 1.4199 (16) |
| C8—H8 | 0.9300 | N1—H1A | 0.8600 |
| C9—C10 | 1.408 (3) | N1—H1B | 0.8600 |
| C2—C1—C10 | 121.24 (18) | C5—C10—C1 | 117.02 (17) |
| C2—C1—S1 | 117.12 (15) | C16—C11—C12 | 123.72 (16) |
| C10—C1—S1 | 121.63 (13) | C16—C11—O1 | 117.47 (15) |
| C1—C2—C3 | 120.2 (2) | C12—C11—O1 | 118.71 (16) |
| C1—C2—H2 | 119.9 | C11—C12—C13 | 116.40 (18) |
| C3—C2—H2 | 119.9 | C11—C12—H12 | 121.8 |
| C4—C3—C2 | 119.7 (2) | C13—C12—H12 | 121.8 |
| C4—C3—H3 | 120.2 | C14—C13—C12 | 121.48 (18) |
| C2—C3—H3 | 120.2 | C14—C13—H13 | 119.3 |
| C3—C4—C5 | 122.6 (2) | C12—C13—H13 | 119.3 |
| C3—C4—H4 | 118.7 | C13—C14—C15 | 120.92 (18) |
| C5—C4—H4 | 118.7 | C13—C14—H14 | 119.5 |
| C4—C5—C6 | 122.3 (3) | C15—C14—H14 | 119.5 |
| C4—C5—C10 | 119.2 (2) | N1—C15—C14 | 121.64 (19) |
| C6—C5—C10 | 118.5 (2) | N1—C15—C16 | 119.91 (19) |
| C7—C6—C5 | 121.6 (3) | C14—C15—C16 | 118.43 (17) |
| C7—C6—H6 | 119.2 | C11—C16—C15 | 119.01 (16) |
| C5—C6—H6 | 119.2 | C11—C16—H16 | 120.5 |
| C6—C7—C8 | 120.6 (2) | C15—C16—H16 | 120.5 |
| C6—C7—H7 | 119.7 | C11—O1—S1 | 118.20 (11) |
| C8—C7—H7 | 119.7 | C15—N1—H1A | 120.0 |
| C9—C8—C7 | 121.2 (3) | C15—N1—H1B | 120.0 |
| C9—C8—H8 | 119.4 | H1A—N1—H1B | 120.0 |
| C7—C8—H8 | 119.4 | O3—S1—O2 | 119.75 (11) |
| C8—C9—C10 | 120.2 (2) | O3—S1—O1 | 103.16 (10) |
| C8—C9—H9 | 119.9 | O2—S1—O1 | 109.45 (9) |
| C10—C9—H9 | 119.9 | O3—S1—C1 | 110.36 (9) |
| C9—C10—C5 | 117.90 (18) | O2—S1—C1 | 108.99 (11) |
| C9—C10—C1 | 125.09 (18) | O1—S1—C1 | 103.85 (7) |
| C10—C1—C2—C3 | 0.2 (3) | C16—C11—C12—C13 | 1.8 (3) |
| S1—C1—C2—C3 | −179.87 (16) | O1—C11—C12—C13 | 178.00 (17) |
| C1—C2—C3—C4 | 0.1 (3) | C11—C12—C13—C14 | −0.9 (3) |
| C2—C3—C4—C5 | 0.1 (4) | C12—C13—C14—C15 | −1.0 (3) |
| C3—C4—C5—C6 | −179.7 (2) | C13—C14—C15—N1 | −179.3 (2) |
| C3—C4—C5—C10 | −0.5 (3) | C13—C14—C15—C16 | 2.1 (3) |
| C4—C5—C6—C7 | 178.7 (2) | C12—C11—C16—C15 | −0.7 (3) |
| C10—C5—C6—C7 | −0.6 (3) | O1—C11—C16—C15 | −176.96 (15) |
| C5—C6—C7—C8 | 0.9 (4) | N1—C15—C16—C11 | −179.90 (18) |
| C6—C7—C8—C9 | −0.4 (4) | C14—C15—C16—C11 | −1.3 (3) |
| C7—C8—C9—C10 | −0.5 (3) | C16—C11—O1—S1 | −91.61 (17) |
| C8—C9—C10—C5 | 0.8 (3) | C12—C11—O1—S1 | 91.97 (18) |
| C8—C9—C10—C1 | −179.44 (16) | C11—O1—S1—O3 | 168.69 (12) |
| C4—C5—C10—C9 | −179.52 (17) | C11—O1—S1—O2 | 40.15 (16) |
| C6—C5—C10—C9 | −0.3 (2) | C11—O1—S1—C1 | −76.12 (13) |
| C4—C5—C10—C1 | 0.7 (2) | C2—C1—S1—O3 | −127.86 (16) |
| C6—C5—C10—C1 | 179.93 (16) | C10—C1—S1—O3 | 52.09 (16) |
| C2—C1—C10—C9 | 179.68 (17) | C2—C1—S1—O2 | 5.58 (17) |
| S1—C1—C10—C9 | −0.3 (2) | C10—C1—S1—O2 | −174.48 (13) |
| C2—C1—C10—C5 | −0.6 (2) | C2—C1—S1—O1 | 122.16 (14) |
| S1—C1—C10—C5 | 179.50 (12) | C10—C1—S1—O1 | −57.89 (14) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C2—H2···O2 | 0.93 | 2.41 | 2.829 (3) | 107 |
| C9—H9···O3 | 0.93 | 2.56 | 3.127 (3) | 120 |
| N1—H1B···O3i | 0.86 | 2.43 | 3.246 (3) | 158 |
| C7—H7···O2ii | 0.93 | 2.56 | 3.422 (3) | 154 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) x, −y+3/2, z−1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GK2179).
References
- Bruker (2004). APEX2 andSAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Manivannan, V., Vembu, N., Nallu, M., Sivakumar, K. & Fronczek, F. R. (2005a). Acta Cryst. E61, o239–o241.
- Manivannan, V., Vembu, N., Nallu, M., Sivakumar, K. & Fronczek, F. R. (2005b). Acta Cryst. E61, o242–o244.
- Ramachandran, G., Kanakam, C. C., Manivannan, V., Thiruvenkatam, V. & Row, T. N. G. (2007). Acta Cryst. E63, o4638.
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2003). J. Appl. Cryst.36, 7–13.
- Spungin, B., Levinshal, T., Rubenstein, S. & Breitbart, H. (1984). Biochim. Biophys. Acta, 769, 531–542.
- Vennila, J. P., Kavitha, H. P., Thiruvadigal, D. J., Venkatraman, B. R. & Manivannan, V. (2008). Acta Cryst. E64, o1848. [DOI] [PMC free article] [PubMed]
- Yachi, K., Sugiyama, Y., Sawada, Y., Iga, T., Ikeda, Y., Toda, G. & Hananon, M. (1989). Biochim. Biophys. Acta, 978, 1–7. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808041032/gk2179sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808041032/gk2179Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


