Abstract
In the title complex, [Cu(C2HCl2O2)2(C12H8N2)(H2O)], the CuII ion has a distorted square-pyramidal coordination geometry. The equatorial positions are occupied by two N atoms from a 1,10-phenanthroline ligand [Cu—N = 1.994 (3) and 2.027 (3) Å] and two O atoms from dichloroacetate ligands and a water molecule [Cu—O = 1.971 (2) and 1.939 (2) Å]. One O atom from another dichloroacetate ligand occupies the apical positon [Cu—O = 2.152 (3) Å]. Intermolecular O—H⋯O hydrogen bonds link the molecules into centrosymmetric dimers. The crystal packing also exhibits weak intermolecular C—H⋯O hydrogen bonds, π–π interactions [centroid–centroid distance = 3.734 (2) Å] and short intermolecular Cl⋯Cl contacts [3.306 (2) and 3.278 (2) Å].
Related literature
For applications of dichloroacetic acid derivatives, see: Múdra et al. (2003 ▶); Lin et al. (2001 ▶); Zhu & Xiao (2006 ▶).
Experimental
Crystal data
[Cu(C2HCl2O2)2(C12H8N2)(H2O)]
M r = 517.62
Triclinic,
a = 8.2701 (8) Å
b = 10.8883 (11) Å
c = 12.0125 (12) Å
α = 67.4390 (10)°
β = 77.585 (2)°
γ = 73.776 (2)°
V = 952.02 (16) Å3
Z = 2
Mo Kα radiation
μ = 1.74 mm−1
T = 273 (2) K
0.32 × 0.25 × 0.21 mm
Data collection
Bruker SMART CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.606, T max = 0.711
5043 measured reflections
3346 independent reflections
2539 reflections with I > 2σ(I)
R int = 0.064
Refinement
R[F 2 > 2σ(F 2)] = 0.042
wR(F 2) = 0.106
S = 1.01
3346 reflections
261 parameters
3 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.63 e Å−3
Δρmin = −0.51 e Å−3
Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808042578/cv2493sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808042578/cv2493Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C16—H16⋯O2i | 0.98 | 2.24 | 3.118 (5) | 149 |
| O5—H5B⋯O2ii | 0.85 (2) | 1.81 (2) | 2.654 (3) | 174 (3) |
| O5—H5A⋯O4 | 0.85 (2) | 1.86 (2) | 2.673 (4) | 159 (3) |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
The authors thank the Postgraduate Foundation of Taishan University for financial support (grant No. Y07–2–15).
supplementary crystallographic information
Comment
Dichloroacetic acid and its derivatives are biologically active compounds which have been widely studied because of their fascinating topologies and potential applications as functional materials (Múdra et al., 2003; Lin et al., 2001; Zhu et al., 2006;). In our study of this field, we selected 1,10-phenanthroline as the co-ligand to continue our exploration to the Cu complexes with the dichloroacetic acid ligand. Herein we report the structure of the title complex (I).
In (I) (Fig. 1), the Cu ion has a distorted square-pyramidal coordination. Two N atoms from 1,10-phenanthroline ligand and two oxygen atoms from a dichloroacetic acid ligand form a basal plane, and an aqua atom occupy the axial apical position. Intermolecular O—H···O hydrogen bonds (Table 2) link the molecules into centrosymmetric dimers. The crystal packing exhibits also weak intermolecular C—H···O hydrogen bonds, π–π interactions and short intermolecular Cl···Cl contacts (Table 1).
Experimental
A mixture of Cu(CH3COO)2*3H2O(204 mg, 1 mmol) and 1,10-phenanthroline (185 mg, 1 mmol) in methanol(30 ml) was placed in a Teflon-lined stainless steel Parr bomb that was heated at 403 K for 48 h. The bomb was then cooled down to the room temperature, the solution was filtered. The solvent was removed from the filtrate under vacuum, and the solid residue was recrystallized from diethyl ether; blue crystals suitable for X-Ray diffraction study were obtained. Yield, 0.760 g, 83%. m.p. 573 K. Analysis, calculated for C16H12Cl4CuN2O5: C 46.73, H 2.94, N 6.81; found: C 46.95, H 2.56, N 7.07%. The elemental analyses were performed with a Perkine Elemer PE2400II instrument.
Refinement
C-bound H atoms were geometrically positioned (C—H 0.93–0.97 Å) and refined as riding, with Uiso(H)=1.2Ueq(C). The water H atoms were located on a Fourier map and isotropically refined with the distance restraints O—H=0.85 (2) Å.
Figures
Fig. 1.
The structure of the title complex, showing 30% probability displacement ellipsoids and the atom-numbering scheme. The H atoms are omitted.
Crystal data
| [Cu(C2HCl2O2)2(C12H8N2)(H2O)] | Z = 2 |
| Mr = 517.62 | F(000) = 518 |
| Triclinic, P1 | Dx = 1.806 Mg m−3 |
| a = 8.2701 (8) Å | Mo Kα radiation, λ = 0.71073 Å |
| b = 10.8883 (11) Å | Cell parameters from 1923 reflections |
| c = 12.0125 (12) Å | θ = 2.3–27.1° |
| α = 67.439 (1)° | µ = 1.74 mm−1 |
| β = 77.585 (2)° | T = 273 K |
| γ = 73.776 (2)° | Block, colorless |
| V = 952.02 (16) Å3 | 0.32 × 0.25 × 0.21 mm |
Data collection
| Bruker SMART CCD area-detector diffractometer | 3346 independent reflections |
| Radiation source: fine-focus sealed tube | 2539 reflections with I > 2σ(I) |
| graphite | Rint = 0.064 |
| φ and ω scans | θmax = 25.1°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→8 |
| Tmin = 0.606, Tmax = 0.711 | k = −12→12 |
| 5043 measured reflections | l = −14→14 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.106 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.00 | w = 1/[σ2(Fo2) + (0.046P)2] where P = (Fo2 + 2Fc2)/3 |
| 3346 reflections | (Δ/σ)max < 0.001 |
| 261 parameters | Δρmax = 0.63 e Å−3 |
| 3 restraints | Δρmin = −0.51 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cu1 | 0.23680 (6) | 0.74569 (4) | 0.41387 (4) | 0.03375 (16) | |
| Cl4 | 0.12884 (15) | 0.83880 (10) | 0.01776 (9) | 0.0498 (3) | |
| Cl3 | 0.18005 (19) | 0.55281 (11) | 0.05837 (10) | 0.0653 (4) | |
| Cl1 | 0.66991 (17) | 0.90846 (12) | 0.08639 (11) | 0.0717 (4) | |
| Cl2 | 0.5908 (2) | 0.69108 (14) | 0.04161 (11) | 0.0831 (5) | |
| O3 | 0.1567 (3) | 0.7463 (2) | 0.2733 (2) | 0.0399 (6) | |
| C5 | 0.2814 (4) | 0.9060 (3) | 0.5379 (3) | 0.0310 (8) | |
| O5 | 0.1749 (4) | 0.5698 (3) | 0.5130 (2) | 0.0471 (7) | |
| N2 | 0.1747 (4) | 0.9522 (3) | 0.3541 (2) | 0.0324 (7) | |
| N1 | 0.3082 (4) | 0.7741 (3) | 0.5489 (3) | 0.0343 (7) | |
| C9 | 0.0716 (5) | 1.1808 (4) | 0.2276 (3) | 0.0447 (10) | |
| H9 | 0.0263 | 1.2392 | 0.1564 | 0.054* | |
| O2 | 0.7530 (4) | 0.6097 (3) | 0.2708 (2) | 0.0586 (8) | |
| C13 | 0.6067 (5) | 0.6806 (4) | 0.2683 (3) | 0.0344 (8) | |
| C16 | 0.0957 (5) | 0.6794 (3) | 0.1249 (3) | 0.0340 (8) | |
| H16 | −0.0272 | 0.6861 | 0.1432 | 0.041* | |
| C11 | 0.2127 (6) | 1.1856 (4) | 0.4993 (4) | 0.0471 (10) | |
| H11 | 0.1873 | 1.2779 | 0.4887 | 0.056* | |
| C15 | 0.1639 (5) | 0.6447 (3) | 0.2447 (3) | 0.0341 (8) | |
| O4 | 0.2088 (4) | 0.5243 (3) | 0.3049 (2) | 0.0609 (9) | |
| C14 | 0.5542 (5) | 0.7783 (4) | 0.1437 (3) | 0.0357 (9) | |
| H14 | 0.4330 | 0.8198 | 0.1536 | 0.043* | |
| C1 | 0.3872 (5) | 0.6806 (4) | 0.6436 (3) | 0.0447 (10) | |
| H1 | 0.4132 | 0.5893 | 0.6509 | 0.054* | |
| C12 | 0.2859 (6) | 1.0935 (4) | 0.5985 (4) | 0.0510 (11) | |
| H12 | 0.3130 | 1.1242 | 0.6531 | 0.061* | |
| C8 | 0.1025 (5) | 1.2327 (4) | 0.3051 (3) | 0.0421 (10) | |
| H8 | 0.0766 | 1.3264 | 0.2879 | 0.051* | |
| C10 | 0.1075 (5) | 1.0398 (4) | 0.2542 (3) | 0.0398 (9) | |
| H10 | 0.0836 | 1.0063 | 0.2004 | 0.048* | |
| C6 | 0.2062 (5) | 1.0040 (3) | 0.4314 (3) | 0.0306 (8) | |
| C7 | 0.1742 (5) | 1.1436 (4) | 0.4118 (3) | 0.0368 (9) | |
| C4 | 0.3223 (5) | 0.9501 (4) | 0.6208 (3) | 0.0390 (9) | |
| C2 | 0.4306 (6) | 0.7160 (4) | 0.7297 (4) | 0.0506 (11) | |
| H2 | 0.4810 | 0.6482 | 0.7955 | 0.061* | |
| O1 | 0.5012 (4) | 0.6801 (3) | 0.3559 (2) | 0.0634 (9) | |
| C3 | 0.4009 (6) | 0.8478 (4) | 0.7199 (3) | 0.0477 (10) | |
| H3 | 0.4321 | 0.8710 | 0.7779 | 0.057* | |
| H5A | 0.192 (6) | 0.535 (3) | 0.458 (2) | 0.065 (16)* | |
| H5B | 0.194 (6) | 0.509 (3) | 0.5816 (15) | 0.068 (15)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cu1 | 0.0471 (3) | 0.0207 (2) | 0.0318 (3) | −0.00140 (19) | −0.0107 (2) | −0.00826 (19) |
| Cl4 | 0.0728 (8) | 0.0307 (5) | 0.0416 (6) | −0.0135 (5) | −0.0179 (5) | −0.0005 (4) |
| Cl3 | 0.1158 (11) | 0.0350 (6) | 0.0486 (6) | −0.0027 (6) | −0.0209 (6) | −0.0222 (5) |
| Cl1 | 0.0801 (9) | 0.0472 (7) | 0.0746 (8) | −0.0293 (6) | −0.0338 (7) | 0.0168 (6) |
| Cl2 | 0.1151 (12) | 0.0745 (9) | 0.0677 (8) | 0.0119 (8) | −0.0340 (8) | −0.0440 (7) |
| O3 | 0.0622 (18) | 0.0227 (13) | 0.0366 (14) | −0.0029 (12) | −0.0151 (13) | −0.0119 (11) |
| C5 | 0.034 (2) | 0.0258 (19) | 0.0303 (18) | −0.0034 (15) | −0.0046 (16) | −0.0087 (15) |
| O5 | 0.073 (2) | 0.0312 (15) | 0.0346 (16) | −0.0132 (15) | −0.0142 (15) | −0.0038 (14) |
| N2 | 0.0419 (19) | 0.0222 (16) | 0.0315 (16) | −0.0044 (13) | −0.0051 (14) | −0.0090 (13) |
| N1 | 0.0420 (18) | 0.0271 (17) | 0.0326 (16) | −0.0042 (14) | −0.0059 (14) | −0.0104 (13) |
| C9 | 0.058 (3) | 0.026 (2) | 0.039 (2) | −0.0008 (18) | −0.014 (2) | −0.0011 (17) |
| O2 | 0.0396 (17) | 0.0558 (19) | 0.0453 (16) | 0.0073 (15) | −0.0018 (14) | 0.0063 (14) |
| C13 | 0.037 (2) | 0.029 (2) | 0.037 (2) | −0.0090 (17) | −0.0027 (18) | −0.0108 (17) |
| C16 | 0.041 (2) | 0.0239 (19) | 0.0350 (19) | −0.0038 (16) | −0.0062 (17) | −0.0094 (16) |
| C11 | 0.066 (3) | 0.029 (2) | 0.052 (2) | −0.010 (2) | −0.010 (2) | −0.018 (2) |
| C15 | 0.041 (2) | 0.024 (2) | 0.034 (2) | −0.0025 (16) | −0.0069 (17) | −0.0084 (16) |
| O4 | 0.113 (3) | 0.0235 (15) | 0.0449 (16) | 0.0005 (16) | −0.0331 (17) | −0.0086 (13) |
| C14 | 0.032 (2) | 0.030 (2) | 0.039 (2) | −0.0029 (16) | −0.0048 (17) | −0.0088 (16) |
| C1 | 0.060 (3) | 0.024 (2) | 0.044 (2) | −0.0006 (19) | −0.018 (2) | −0.0048 (17) |
| C12 | 0.072 (3) | 0.043 (3) | 0.051 (3) | −0.018 (2) | −0.008 (2) | −0.026 (2) |
| C8 | 0.051 (3) | 0.0200 (19) | 0.047 (2) | −0.0035 (17) | −0.007 (2) | −0.0049 (17) |
| C10 | 0.051 (2) | 0.030 (2) | 0.035 (2) | −0.0034 (18) | −0.0145 (18) | −0.0065 (17) |
| C6 | 0.034 (2) | 0.0242 (19) | 0.0298 (18) | −0.0039 (15) | 0.0009 (15) | −0.0097 (15) |
| C7 | 0.040 (2) | 0.0229 (19) | 0.042 (2) | −0.0055 (16) | −0.0010 (18) | −0.0088 (17) |
| C4 | 0.044 (2) | 0.039 (2) | 0.036 (2) | −0.0094 (18) | −0.0024 (18) | −0.0149 (18) |
| C2 | 0.063 (3) | 0.043 (3) | 0.040 (2) | −0.005 (2) | −0.020 (2) | −0.006 (2) |
| O1 | 0.0491 (19) | 0.083 (2) | 0.0386 (16) | 0.0057 (16) | −0.0020 (15) | −0.0158 (16) |
| C3 | 0.057 (3) | 0.052 (3) | 0.038 (2) | −0.010 (2) | −0.014 (2) | −0.016 (2) |
Geometric parameters (Å, °)
| Cu1—O3 | 1.939 (2) | C13—O1 | 1.213 (4) |
| Cu1—O5 | 1.971 (2) | C13—C14 | 1.536 (5) |
| Cu1—N1 | 1.994 (3) | C16—C15 | 1.531 (5) |
| Cu1—N2 | 2.027 (3) | C16—H16 | 0.9800 |
| Cu1—O1 | 2.152 (3) | C11—C12 | 1.359 (6) |
| Cl4—C16 | 1.774 (3) | C11—C7 | 1.417 (5) |
| Cl3—C16 | 1.759 (4) | C11—H11 | 0.9300 |
| Cl1—C14 | 1.767 (4) | C15—O4 | 1.223 (4) |
| Cl2—C14 | 1.753 (4) | C14—H14 | 0.9800 |
| O3—C15 | 1.261 (4) | C1—C2 | 1.374 (5) |
| C5—N1 | 1.348 (4) | C1—H1 | 0.9300 |
| C5—C4 | 1.394 (5) | C12—C4 | 1.432 (5) |
| C5—C6 | 1.444 (5) | C12—H12 | 0.9300 |
| O5—H5A | 0.85 (3) | C8—C7 | 1.410 (5) |
| O5—H5B | 0.85 (3) | C8—H8 | 0.9300 |
| N2—C10 | 1.331 (4) | C10—H10 | 0.9300 |
| N2—C6 | 1.355 (4) | C6—C7 | 1.401 (5) |
| N1—C1 | 1.348 (4) | C4—C3 | 1.411 (5) |
| C9—C8 | 1.355 (5) | C2—C3 | 1.349 (5) |
| C9—C10 | 1.399 (5) | C2—H2 | 0.9300 |
| C9—H9 | 0.9300 | C3—H3 | 0.9300 |
| O2—C13 | 1.240 (5) | ||
| Cl1···Cl4i | 3.306 (2) | Cg1···Cg2iii | 3.734 (2) |
| Cl2···Cl3ii | 3.278 (2) | ||
| O3—Cu1—O5 | 91.06 (10) | O4—C15—O3 | 127.3 (3) |
| O3—Cu1—N1 | 171.76 (11) | O4—C15—C16 | 117.8 (3) |
| O5—Cu1—N1 | 95.86 (11) | O3—C15—C16 | 114.7 (3) |
| O3—Cu1—N2 | 90.28 (11) | C13—C14—Cl2 | 110.9 (3) |
| O5—Cu1—N2 | 149.53 (12) | C13—C14—Cl1 | 109.3 (2) |
| N1—Cu1—N2 | 81.49 (11) | Cl2—C14—Cl1 | 110.0 (2) |
| O3—Cu1—O1 | 95.15 (11) | C13—C14—H14 | 108.9 |
| O5—Cu1—O1 | 101.24 (12) | Cl2—C14—H14 | 108.9 |
| N1—Cu1—O1 | 87.88 (12) | Cl1—C14—H14 | 108.9 |
| N2—Cu1—O1 | 108.94 (12) | N1—C1—C2 | 122.1 (4) |
| C15—O3—Cu1 | 127.3 (2) | N1—C1—H1 | 118.9 |
| N1—C5—C4 | 124.2 (3) | C2—C1—H1 | 119.0 |
| N1—C5—C6 | 115.7 (3) | C11—C12—C4 | 121.4 (4) |
| C4—C5—C6 | 120.1 (3) | C11—C12—H12 | 119.3 |
| Cu1—O5—H5A | 99 (2) | C4—C12—H12 | 119.3 |
| Cu1—O5—H5B | 137 (3) | C9—C8—C7 | 119.6 (3) |
| H5A—O5—H5B | 111 (3) | C9—C8—H8 | 120.2 |
| C10—N2—C6 | 117.7 (3) | C7—C8—H8 | 120.2 |
| C10—N2—Cu1 | 129.8 (3) | N2—C10—C9 | 121.9 (4) |
| C6—N2—Cu1 | 112.5 (2) | N2—C10—H10 | 119.0 |
| C1—N1—C5 | 117.1 (3) | C9—C10—H10 | 119.1 |
| C1—N1—Cu1 | 128.6 (3) | N2—C6—C7 | 124.1 (3) |
| C5—N1—Cu1 | 114.1 (2) | N2—C6—C5 | 116.1 (3) |
| C8—C9—C10 | 120.4 (4) | C7—C6—C5 | 119.8 (3) |
| C8—C9—H9 | 119.8 | C6—C7—C8 | 116.3 (3) |
| C10—C9—H9 | 119.8 | C6—C7—C11 | 118.9 (3) |
| O1—C13—O2 | 125.7 (4) | C8—C7—C11 | 124.7 (3) |
| O1—C13—C14 | 117.0 (3) | C5—C4—C3 | 116.3 (3) |
| O2—C13—C14 | 117.3 (3) | C5—C4—C12 | 118.5 (3) |
| C15—C16—Cl3 | 113.0 (3) | C3—C4—C12 | 125.2 (3) |
| C15—C16—Cl4 | 112.4 (2) | C3—C2—C1 | 120.8 (3) |
| Cl3—C16—Cl4 | 109.30 (19) | C3—C2—H2 | 119.6 |
| C15—C16—H16 | 107.3 | C1—C2—H2 | 119.6 |
| Cl3—C16—H16 | 107.3 | C13—O1—Cu1 | 144.6 (3) |
| Cl4—C16—H16 | 107.3 | C2—C3—C4 | 119.4 (3) |
| C12—C11—C7 | 121.2 (4) | C2—C3—H3 | 120.3 |
| C12—C11—H11 | 119.4 | C4—C3—H3 | 120.3 |
| C7—C11—H11 | 119.4 |
Symmetry codes: (i) −x+1, −y+2, −z; (ii) −x+1, −y+1, −z; (iii) −x, −y+1, −z+2.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C16—H16···O2iv | 0.98 | 2.24 | 3.118 (5) | 149 |
| O5—H5B···O2v | 0.85 (2) | 1.81 (2) | 2.654 (3) | 174 (3) |
| O5—H5A···O4 | 0.85 (2) | 1.86 (2) | 2.673 (4) | 159 (3) |
Symmetry codes: (iv) x−1, y, z; (v) −x+1, −y+1, −z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CV2493).
References
- Lin, M. M., Wei, H. H. & Lee, G. H. (2001). Polyhedron, 20, 3057–3063.
- Múdra, M., Moncol’, J., Švorec, J., Melník, M., Lönnecke, P., Glowiak, T. & Kirmse, R. (2003). Inorg. Chem. Commun.6, 1259–1265.
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Siemens (1996). SMART and SAINT Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA.
- Zhu, L.-G. & Xiao, H.-P. (2006). Acta Cryst. E62, m2061–m2063.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808042578/cv2493sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808042578/cv2493Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

