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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Jan 8;65(Pt 2):m136. doi: 10.1107/S1600536808043468

Dichlorido(dipyrido[3,2-a:2′,3′-c]phenazine)manganese(II)

Mao-Liang Xu a, Shu-Bo Sun b, Xiu-Ying Li c, Guang-Bo Che c,*
PMCID: PMC2968193  PMID: 21581752

Abstract

The complete mol­ecule of the title compound, [MnCl2(C18H10N4)2], is generated by crystallographic twofold symmetry with the Mn atom lying on the rotation axis. The Mn coordination geometry is a distorted cis-MnCl2N4 octa­hedron, arising from two N,N′-bidentate dipyrido[3,2-a:2′,3′-c]phenazine (DPPZ) ligands and two chloride ions. In the crystal structure, neighbouring mononuclear units pack together through π–π contacts between the DPPZ rings [shortest centroid–centroid distance = 3.480 (2) Å], leading to a chain-like structure along [001]. C—H⋯Cl hydrogen bonds complete the structure.

Related literature

For background, see: Che et al. (2006, 2008); Xu et al. (2008).graphic file with name e-65-0m136-scheme1.jpg

Experimental

Crystal data

  • [MnCl2(C18H10N4)2]

  • M r = 690.44

  • Monoclinic, Inline graphic

  • a = 8.4017 (17) Å

  • b = 12.256 (3) Å

  • c = 28.226 (6) Å

  • β = 95.09 (3)°

  • V = 2895.0 (10) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.69 mm−1

  • T = 292 (2) K

  • 0.38 × 0.24 × 0.21 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2002) T min = 0.821, T max = 0.864

  • 11873 measured reflections

  • 2866 independent reflections

  • 1748 reflections with I > 2σ(I)

  • R int = 0.078

Refinement

  • R[F 2 > 2σ(F 2)] = 0.053

  • wR(F 2) = 0.120

  • S = 1.00

  • 2866 reflections

  • 243 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.32 e Å−3

  • Δρmin = −0.43 e Å−3

Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808043468/hb2884sup1.cif

e-65-0m136-sup1.cif (17.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808043468/hb2884Isup2.hkl

e-65-0m136-Isup2.hkl (137.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected bond lengths (Å).

Mn—N1 2.283 (3)
Mn—N2 2.316 (3)
Mn—Cl 2.4644 (12)

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C2—H2⋯Cli 1.09 (3) 2.67 (3) 3.737 (4) 168 (2)
C15—H15⋯Clii 1.04 (3) 2.64 (3) 3.648 (4) 163 (3)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors thank the Doctoral Foundation of Jilin Normal University (grant Nos. 2006006 and 2007009) and the Subject and Base Construction Foundation of Jilin Normal University (grant No. 2006041).

supplementary crystallographic information

Comment

1,10-Phenanthroline (phen) and its derivatives, as chelating N-containing aromatic ligands, has been extensively studied in the chemistry of coordination polymers (Che et al., 2008). Here, we report the crystal structure of the title compound, [Mn(DPPZ)2Cl2] or [Mn(C18H10N4)2Cl2] (I), based on the dipyrido[3,2 - a:2',3'-c]-phenazine (DPPZ) ligand (Xu et al., 2008).

In compound (I), the Mn atom (site symmetry 2) is coordinated in a distorted octahedral fashion (Fig. 1) by four N atoms from two DPPZ ligands and two Cl ions (Table 1). The DPPZ ring systems is almost planar and the dihedral angle between the two symmetry-related DPPZ planes is 70.66°.

π-π stacking interactions between the DPPZ ligands assemble mononuclear complex molecules into one-dimensional chains along (001) [centroid-centroid distances = 3.480 (2) Å] (Fig. 2). Finally, C—H···Cl hydrogen bonds involving the hydrogen of aromatic rings and the Cl ions further stabilize the crystal structure (Table 2).

Experimental

The DPPZ ligand was synthesized according to the literature method of Che et al. (2006). A mixture of DPPZ, MnCl2 and water in a molar ratio of 2:1:5000 was sealed in a Teflon-lined autoclave and heated to 423 K for 3 d. Upon cooling and opening the bomb, yellow blocks of (I) were obtained (81% yield based on Mn).

Refinement

The H atoms were located in a difference map and their positions were freely refined with a fixed Uiso value of 0.06Å2.

Figures

Fig. 1.

Fig. 1.

A view of (I). Displacement ellipsoids are drawn at the 30% probability level (arbitrary spheres for the H atoms). [Symmetry code: (i) -x + 2, y, -z + 1/2.]

Fig. 2.

Fig. 2.

View of the supramolecular chain structure of (I) arising from π-π stacking. H atoms have been omitted. [Symmetry code: (A) -x + 2, y, -z + 1/2; (B) x, -y + 1, -z; (C) x, y, -z - 1; (BA) x, -y + 1, -z - 1.]

Crystal data

[MnCl2(C18H10N4)2] F(000) = 1404
Mr = 690.44 Dx = 1.584 Mg m3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 2001 reflections
a = 8.4017 (17) Å θ = 2.9–26.1°
b = 12.256 (3) Å µ = 0.69 mm1
c = 28.226 (6) Å T = 292 K
β = 95.09 (3)° Block, yellow
V = 2895.0 (10) Å3 0.38 × 0.24 × 0.21 mm
Z = 4

Data collection

Bruker SMART CCD area-detector diffractometer 2866 independent reflections
Radiation source: fine-focus sealed tube 1748 reflections with I > 2σ(I)
graphite Rint = 0.078
ω scans θmax = 26.1°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2002) h = −10→10
Tmin = 0.821, Tmax = 0.864 k = −15→15
11873 measured reflections l = −34→34

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.120 H atoms treated by a mixture of independent and constrained refinement
S = 1.00 w = 1/[σ2(Fo2) + (0.0518P)2] where P = (Fo2 + 2Fc2)/3
2866 reflections (Δ/σ)max = 0.001
243 parameters Δρmax = 0.32 e Å3
0 restraints Δρmin = −0.42 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.6671 (4) 0.3405 (3) 0.29912 (12) 0.0408 (9)
C2 0.5622 (4) 0.3550 (3) 0.33399 (12) 0.0459 (10)
C3 0.6118 (4) 0.4167 (3) 0.37276 (13) 0.0461 (10)
C4 0.7619 (4) 0.4666 (3) 0.37635 (11) 0.0343 (8)
C5 0.8223 (4) 0.5307 (3) 0.41737 (11) 0.0367 (9)
C7 0.7118 (5) 0.6056 (3) 0.53324 (14) 0.0508 (11)
C8 0.7738 (5) 0.6604 (3) 0.57158 (13) 0.0521 (11)
C9 0.9253 (5) 0.7097 (3) 0.57276 (13) 0.0501 (11)
C10 1.0139 (5) 0.7010 (3) 0.53419 (13) 0.0508 (11)
C11 0.9520 (4) 0.6445 (3) 0.49315 (12) 0.0424 (9)
C12 0.9766 (4) 0.5811 (3) 0.41822 (12) 0.0373 (9)
C13 1.0710 (4) 0.5678 (3) 0.37731 (11) 0.0364 (9)
C14 1.2220 (4) 0.6152 (3) 0.37604 (13) 0.0448 (10)
C15 1.3054 (4) 0.5992 (3) 0.33699 (13) 0.0472 (10)
C16 1.2389 (4) 0.5345 (3) 0.30016 (13) 0.0419 (9)
C17 1.0135 (4) 0.5042 (3) 0.33907 (11) 0.0345 (8)
C18 0.8568 (4) 0.4510 (3) 0.33849 (11) 0.0333 (8)
C6 0.7985 (4) 0.5942 (3) 0.49265 (12) 0.0404 (9)
N1 0.8113 (3) 0.3861 (2) 0.30102 (9) 0.0377 (7)
N2 1.0963 (3) 0.4861 (2) 0.30080 (9) 0.0380 (7)
N3 0.7343 (3) 0.5382 (2) 0.45415 (9) 0.0409 (8)
N4 1.0403 (3) 0.6370 (2) 0.45531 (10) 0.0427 (8)
Mn 1.0000 0.34811 (7) 0.2500 0.0383 (3)
Cl 0.82991 (11) 0.22033 (8) 0.20077 (3) 0.0501 (3)
H1 0.634 (4) 0.289 (3) 0.2722 (13) 0.060*
H2 0.448 (4) 0.313 (3) 0.3296 (12) 0.060*
H3 0.550 (4) 0.427 (3) 0.3977 (13) 0.060*
H7 0.613 (4) 0.566 (3) 0.5315 (12) 0.060*
H8 0.720 (4) 0.663 (3) 0.5996 (13) 0.060*
H9 0.973 (4) 0.751 (3) 0.6018 (14) 0.060*
H10 1.116 (4) 0.738 (3) 0.5341 (13) 0.060*
H14 1.264 (4) 0.661 (3) 0.3997 (13) 0.060*
H15 1.417 (4) 0.634 (3) 0.3341 (12) 0.060*
H16 1.299 (4) 0.524 (3) 0.2703 (12) 0.060*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.036 (2) 0.056 (3) 0.031 (2) −0.0009 (19) 0.0073 (16) −0.0062 (19)
C2 0.036 (2) 0.068 (3) 0.035 (2) −0.003 (2) 0.0089 (17) −0.006 (2)
C3 0.037 (2) 0.069 (3) 0.035 (2) 0.003 (2) 0.0195 (18) 0.000 (2)
C4 0.0330 (19) 0.043 (2) 0.0278 (19) 0.0012 (17) 0.0080 (15) 0.0006 (16)
C5 0.037 (2) 0.045 (2) 0.0288 (19) 0.0031 (18) 0.0086 (16) 0.0008 (17)
C7 0.058 (3) 0.061 (3) 0.036 (2) 0.005 (2) 0.019 (2) −0.003 (2)
C8 0.061 (3) 0.069 (3) 0.029 (2) 0.004 (2) 0.0175 (19) −0.008 (2)
C9 0.060 (3) 0.058 (3) 0.032 (2) 0.012 (2) 0.002 (2) −0.008 (2)
C10 0.054 (3) 0.061 (3) 0.037 (2) −0.002 (2) 0.007 (2) −0.009 (2)
C11 0.049 (2) 0.050 (2) 0.029 (2) 0.005 (2) 0.0079 (17) −0.0027 (18)
C12 0.041 (2) 0.042 (2) 0.030 (2) 0.0025 (18) 0.0095 (16) −0.0019 (18)
C13 0.039 (2) 0.042 (2) 0.030 (2) 0.0012 (17) 0.0075 (16) −0.0004 (17)
C14 0.045 (2) 0.051 (3) 0.039 (2) −0.010 (2) 0.0098 (18) −0.0088 (19)
C15 0.038 (2) 0.056 (3) 0.049 (2) −0.009 (2) 0.0158 (19) −0.002 (2)
C16 0.044 (2) 0.051 (2) 0.032 (2) −0.0016 (19) 0.0128 (17) 0.0011 (19)
C17 0.0339 (19) 0.044 (2) 0.0269 (19) 0.0051 (17) 0.0078 (15) 0.0047 (17)
C18 0.0342 (19) 0.041 (2) 0.0257 (19) 0.0034 (17) 0.0065 (15) 0.0021 (17)
C6 0.047 (2) 0.050 (2) 0.025 (2) 0.0076 (19) 0.0090 (16) −0.0031 (18)
N1 0.0344 (16) 0.049 (2) 0.0300 (17) −0.0013 (15) 0.0053 (13) −0.0018 (15)
N2 0.0379 (17) 0.050 (2) 0.0283 (16) 0.0001 (15) 0.0129 (13) 0.0004 (14)
N3 0.0396 (17) 0.054 (2) 0.0307 (17) 0.0027 (15) 0.0128 (14) −0.0028 (15)
N4 0.0452 (18) 0.052 (2) 0.0317 (17) 0.0017 (15) 0.0091 (14) −0.0061 (15)
Mn 0.0351 (4) 0.0540 (6) 0.0273 (4) 0.000 0.0113 (3) 0.000
Cl 0.0432 (6) 0.0631 (7) 0.0448 (6) 0.0003 (5) 0.0081 (4) −0.0096 (5)

Geometric parameters (Å, °)

C1—N1 1.330 (4) C11—C6 1.429 (5)
C1—C2 1.390 (5) C12—N4 1.323 (4)
C1—H1 1.01 (4) C12—C13 1.467 (4)
C2—C3 1.365 (5) C13—C17 1.383 (4)
C2—H2 1.08 (4) C13—C14 1.399 (5)
C3—C4 1.397 (5) C14—C15 1.372 (5)
C3—H3 0.92 (4) C14—H14 0.92 (4)
C4—C18 1.402 (4) C15—C16 1.385 (5)
C4—C5 1.453 (4) C15—H15 1.04 (4)
C5—N3 1.330 (4) C16—N2 1.339 (4)
C5—C12 1.434 (4) C16—H16 1.03 (3)
C7—C8 1.339 (5) C17—N2 1.354 (4)
C7—C6 1.418 (5) C17—C18 1.468 (4)
C7—H7 0.96 (3) C18—N1 1.351 (4)
C8—C9 1.406 (5) C6—N3 1.356 (4)
C8—H8 0.95 (4) Mn—N1 2.283 (3)
C9—C10 1.377 (5) Mn—N2 2.316 (3)
C9—H9 1.02 (4) Mn—Cl 2.4644 (12)
C10—C11 1.409 (5) Mn—N1i 2.283 (3)
C10—H10 0.97 (4) Mn—N2i 2.316 (3)
C11—N4 1.357 (4) Mn—Cli 2.4644 (12)
N1—C1—C2 123.4 (4) C14—C15—C16 119.0 (3)
N1—C1—H1 119 (2) C14—C15—H15 122 (2)
C2—C1—H1 118 (2) C16—C15—H15 118.7 (19)
C3—C2—C1 118.1 (4) N2—C16—C15 123.1 (3)
C3—C2—H2 123.9 (19) N2—C16—H16 117.5 (19)
C1—C2—H2 118.0 (19) C15—C16—H16 119 (2)
C2—C3—C4 120.7 (3) N2—C17—C13 123.1 (3)
C2—C3—H3 123 (2) N2—C17—C18 116.2 (3)
C4—C3—H3 117 (2) C13—C17—C18 120.6 (3)
C3—C4—C18 117.1 (3) N1—C18—C4 122.4 (3)
C3—C4—C5 122.9 (3) N1—C18—C17 117.5 (3)
C18—C4—C5 119.9 (3) C4—C18—C17 120.1 (3)
N3—C5—C12 121.5 (3) N3—C6—C7 120.1 (3)
N3—C5—C4 118.7 (3) N3—C6—C11 121.4 (3)
C12—C5—C4 119.8 (3) C7—C6—C11 118.5 (3)
C8—C7—C6 120.8 (4) C1—N1—C18 118.2 (3)
C8—C7—H7 125 (2) C1—N1—Mn 124.7 (2)
C6—C7—H7 114 (2) C18—N1—Mn 116.7 (2)
C7—C8—C9 121.4 (4) C16—N2—C17 117.5 (3)
C7—C8—H8 121 (2) C16—N2—Mn 125.4 (2)
C9—C8—H8 118 (2) C17—N2—Mn 116.0 (2)
C10—C9—C8 120.0 (4) C5—N3—C6 116.8 (3)
C10—C9—H9 118 (2) C12—N4—C11 116.6 (3)
C8—C9—H9 122 (2) N1i—Mn—N1 156.48 (15)
C9—C10—C11 120.1 (4) N1i—Mn—N2 91.01 (10)
C9—C10—H10 120 (2) N1—Mn—N2 71.63 (10)
C11—C10—H10 119 (2) N1i—Mn—N2i 71.63 (10)
N4—C11—C10 119.5 (3) N1—Mn—N2i 91.01 (10)
N4—C11—C6 121.3 (3) N2—Mn—N2i 86.22 (14)
C10—C11—C6 119.2 (3) N1i—Mn—Cl 100.04 (7)
N4—C12—C5 122.5 (3) N1—Mn—Cl 94.86 (8)
N4—C12—C13 118.1 (3) N2—Mn—Cl 165.09 (7)
C5—C12—C13 119.3 (3) N2i—Mn—Cl 87.79 (8)
C17—C13—C14 118.0 (3) N1i—Mn—Cli 94.86 (8)
C17—C13—C12 120.1 (3) N1—Mn—Cli 100.04 (7)
C14—C13—C12 121.9 (3) N2—Mn—Cli 87.79 (8)
C15—C14—C13 119.4 (4) N2i—Mn—Cli 165.09 (7)
C15—C14—H14 119 (2) Cl—Mn—Cli 101.09 (6)
C13—C14—H14 122 (2)

Symmetry codes: (i) −x+2, y, −z+1/2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C2—H2···Clii 1.09 (3) 2.67 (3) 3.737 (4) 168 (2)
C15—H15···Cliii 1.04 (3) 2.64 (3) 3.648 (4) 163 (3)

Symmetry codes: (ii) −x+1, y, −z+1/2; (iii) −x+5/2, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB2884).

References

  1. Bruker (2002). SMART, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Che, G.-B., Li, W.-L., Kong, Z.-G., Su, Z.-S., Chu, B., Li, B., Zhang, Z.-Q., Hu, Z.-Z. & Chi, H.-J. (2006). Synth. Commun.36, 2519–2524.
  3. Che, G.-B., Liu, C.-B., Liu, B., Wang, Q.-W. & Xu, Z.-L. (2008). CrystEngComm, 10, 184–191.
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  5. Xu, Z.-L., Li, X.-Y., Che, G.-B., Liu, C.-B. & Wang, Q.-W. (2008). Chin. J. Struct. Chem.27, 593–597.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808043468/hb2884sup1.cif

e-65-0m136-sup1.cif (17.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808043468/hb2884Isup2.hkl

e-65-0m136-Isup2.hkl (137.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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