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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Jan 31;65(Pt 2):o440. doi: 10.1107/S1600536809003456

1,3-Dimethyl­benzo[b]dibenzothio­phene

P R Umarani a, A Marx a, V Dhayalan b, A K Mohanakrishnan b, V Manivannan a,*
PMCID: PMC2968210  PMID: 21582025

Abstract

The molecule of the title compound, C18H14S, is approximately planar (r.m.s. deviation = 0.029 Å). The crystal packing is stabilized by weak inter­molecular C—H⋯π inter­actions.

Related literature

For the pharmacological activities of thio­phen derivatives, see: Dzhurayev et al. (1992); El-Maghraby et al. (1984); Gewald et al. (1996). For related structures, see: Harrison et al. (2006); Palani et al. (2006). For bond-length data, see: Allen et al. (1987).graphic file with name e-65-0o440-scheme1.jpg

Experimental

Crystal data

  • C18H14S

  • M r = 262.35

  • Monoclinic, Inline graphic

  • a = 10.0219 (3) Å

  • b = 5.8692 (5) Å

  • c = 22.8554 (5) Å

  • β = 99.787 (1)°

  • V = 1324.80 (12) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.23 mm−1

  • T = 295 (2) K

  • 0.26 × 0.20 × 0.18 mm

Data collection

  • Bruker Kappa APEXII diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.944, T max = 0.961

  • 27929 measured reflections

  • 3030 independent reflections

  • 2574 reflections with I > 2σ(I)

  • R int = 0.029

Refinement

  • R[F 2 > 2σ(F 2)] = 0.046

  • wR(F 2) = 0.137

  • S = 1.08

  • 3030 reflections

  • 174 parameters

  • H-atom parameters constrained

  • Δρmax = 0.26 e Å−3

  • Δρmin = −0.29 e Å−3

Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809003456/bt2861sup1.cif

e-65-0o440-sup1.cif (17KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809003456/bt2861Isup2.hkl

e-65-0o440-Isup2.hkl (145.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 is the centroid of the C7–C9/C14–C16 ring and Cg2 is the centroid of the C1–C6 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C17—H17CCg1i 0.96 2.68 3.486 (2) 142
C18—H18ACg2ii 0.96 2.75 3.649 (3) 155

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

supplementary crystallographic information

Comment

Thiophen derivatives possess pharmacological activities such as anti-bacterial, anti-cancer, anti-inflammatory (El-Maghraby et al., 1984; Dzhurayev et al., 1992) and anti-toxic properties (Gewald et al., 1996).

The geometric parameters of the title molecule (Fig. 1) agree well with related structures (Harrison et al., 2006; Palani et al., 2006) and literature values (Allen et al., 1987). All non-H atoms lie in a common plane (r.m.s. deviation 0.029Å) .

The crystal packing is stabilized by weak intermolecular C - H···π [C17—H17C···Cg1 (1 - x, -y, 1 - z), H17C···Cg1 = 2.68 Å, C18—H18A··· Cg2 (1 + x, y, z), H18A···Cg1 = 2.75 Å; Cg1 and Cg2 are the centroid of rings defined by atoms C7/C8/C9/C14/C15/C16 and C1—C6, respectively) interactions. No significant intra- and intermolecular hydrogen bonds are observed.

Experimental

To a solution of diethyl 2-((2-(bromomethyl)banzo[b]thiophen-3-yl) methylene)malonate (0.35 g, 0.88 mmol) in dry 1,2-DCE (15 ml), ZnBr2 (0.39 g, 1.73 mmol) and m-xylene (0.13 ml, 1.03 mmol), were added. The reaction mixture was then refluxed for 2 h under N2 atmosphere. It was then poured over ice-water (50 ml) containing 2 ml of conc.HCl, extracted with chloroform (3 X 10 ml) and dried (Na2SO4). The removal of solvent followed by flash column chromatographic purification (silica gel, 230–420 mesh, n-hexane/ethyl acetate 99:1) afforded 1,3-dimethylbenzo[2,3-b] dibenzothiophene as a colourless crystal.

Refinement

H atoms were positioned geometrically and refined using a riding model with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic H atoms and C—H = 0.96 Å and Uiso(H) = 1.5Ueq(C) for methyl H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I), with atom labels and 50% probability displacement ellipsoids for non-H atoms.

Crystal data

C18H14S F(000) = 552
Mr = 262.35 Dx = 1.315 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 6370 reflections
a = 10.0219 (3) Å θ = 2.1–27.4°
b = 5.8692 (5) Å µ = 0.23 mm1
c = 22.8554 (5) Å T = 295 K
β = 99.787 (1)° Block, colourless
V = 1324.80 (12) Å3 0.26 × 0.20 × 0.18 mm
Z = 4

Data collection

Bruker Kappa APEXII diffractometer 3030 independent reflections
Radiation source: fine-focus sealed tube 2574 reflections with I > 2σ(I)
graphite Rint = 0.029
ω and φ scans θmax = 27.5°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −13→13
Tmin = 0.944, Tmax = 0.961 k = −7→7
27929 measured reflections l = −29→29

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.137 H-atom parameters constrained
S = 1.08 w = 1/[σ2(Fo2) + (0.0636P)2 + 0.5697P] where P = (Fo2 + 2Fc2)/3
3030 reflections (Δ/σ)max < 0.001
174 parameters Δρmax = 0.26 e Å3
0 restraints Δρmin = −0.29 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.07838 (18) −0.0783 (3) 0.33166 (8) 0.0456 (4)
C2 −0.0587 (2) −0.0829 (4) 0.30694 (10) 0.0567 (5)
H2 −0.1153 −0.1953 0.3177 0.068*
C3 −0.1081 (2) 0.0813 (4) 0.26653 (9) 0.0603 (6)
H3 −0.1993 0.0801 0.2496 0.072*
C4 −0.0245 (2) 0.2490 (4) 0.25047 (9) 0.0579 (5)
H4 −0.0599 0.3589 0.2228 0.069*
C5 0.1110 (2) 0.2546 (3) 0.27511 (8) 0.0494 (5)
H5 0.1667 0.3678 0.2641 0.059*
C6 0.16390 (17) 0.0909 (3) 0.31632 (7) 0.0403 (4)
C7 0.30153 (17) 0.0662 (3) 0.34821 (7) 0.0378 (4)
C8 0.41378 (18) 0.1971 (3) 0.34603 (7) 0.0408 (4)
H8 0.4071 0.3228 0.3209 0.049*
C9 0.53930 (17) 0.1436 (3) 0.38139 (7) 0.0390 (4)
C10 0.65545 (19) 0.2770 (3) 0.37964 (8) 0.0472 (4)
H10 0.6490 0.4027 0.3545 0.057*
C11 0.77693 (19) 0.2268 (3) 0.41376 (9) 0.0480 (4)
C12 0.78456 (18) 0.0376 (3) 0.45225 (8) 0.0477 (4)
H12 0.8674 0.0037 0.4757 0.057*
C13 0.67622 (18) −0.0979 (3) 0.45659 (8) 0.0419 (4)
C14 0.54908 (17) −0.0488 (3) 0.41992 (7) 0.0381 (4)
C15 0.43329 (18) −0.1822 (3) 0.42159 (8) 0.0437 (4)
H15 0.4381 −0.3086 0.4464 0.052*
C16 0.31376 (18) −0.1253 (3) 0.38656 (8) 0.0418 (4)
C17 0.6892 (2) −0.2914 (4) 0.49988 (9) 0.0523 (5)
H17A 0.7795 −0.2944 0.5222 0.078*
H17B 0.6709 −0.4324 0.4787 0.078*
H17C 0.6256 −0.2714 0.5265 0.078*
C18 0.9007 (2) 0.3703 (4) 0.41279 (11) 0.0648 (6)
H18A 0.9598 0.2941 0.3902 0.097*
H18B 0.9471 0.3935 0.4527 0.097*
H18C 0.8742 0.5149 0.3949 0.097*
S1 0.16072 (5) −0.26890 (9) 0.38419 (3) 0.0592 (2)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0419 (9) 0.0449 (10) 0.0474 (9) −0.0078 (8) 0.0001 (7) −0.0003 (8)
C2 0.0429 (10) 0.0597 (12) 0.0632 (12) −0.0153 (9) −0.0030 (9) 0.0030 (10)
C3 0.0429 (10) 0.0772 (15) 0.0557 (11) −0.0015 (10) −0.0060 (8) −0.0008 (10)
C4 0.0542 (11) 0.0668 (14) 0.0491 (11) 0.0049 (10) −0.0018 (9) 0.0105 (9)
C5 0.0511 (10) 0.0519 (11) 0.0442 (9) −0.0012 (8) 0.0053 (8) 0.0069 (8)
C6 0.0406 (9) 0.0429 (9) 0.0367 (8) −0.0034 (7) 0.0042 (7) −0.0033 (7)
C7 0.0391 (8) 0.0378 (8) 0.0361 (8) −0.0034 (7) 0.0054 (6) −0.0014 (6)
C8 0.0425 (9) 0.0404 (9) 0.0393 (8) −0.0059 (7) 0.0068 (7) 0.0049 (7)
C9 0.0388 (8) 0.0408 (9) 0.0383 (8) −0.0050 (7) 0.0089 (6) −0.0013 (7)
C10 0.0447 (10) 0.0488 (10) 0.0494 (10) −0.0102 (8) 0.0120 (8) 0.0035 (8)
C11 0.0391 (9) 0.0550 (11) 0.0513 (10) −0.0108 (8) 0.0116 (8) −0.0053 (8)
C12 0.0352 (8) 0.0562 (11) 0.0507 (10) 0.0011 (8) 0.0042 (7) −0.0036 (8)
C13 0.0401 (9) 0.0432 (9) 0.0422 (9) 0.0020 (7) 0.0066 (7) −0.0026 (7)
C14 0.0387 (8) 0.0371 (9) 0.0386 (8) −0.0022 (7) 0.0068 (6) −0.0023 (7)
C15 0.0445 (9) 0.0353 (9) 0.0497 (10) −0.0051 (7) 0.0036 (7) 0.0050 (7)
C16 0.0417 (9) 0.0364 (9) 0.0461 (9) −0.0101 (7) 0.0036 (7) 0.0007 (7)
C17 0.0486 (11) 0.0520 (11) 0.0544 (11) 0.0057 (9) 0.0033 (8) 0.0060 (9)
C18 0.0422 (10) 0.0745 (15) 0.0786 (15) −0.0188 (10) 0.0127 (10) −0.0002 (12)
S1 0.0460 (3) 0.0503 (3) 0.0749 (4) −0.0193 (2) −0.0080 (2) 0.0180 (2)

Geometric parameters (Å, °)

C1—C2 1.394 (3) C10—C11 1.362 (3)
C1—C6 1.395 (3) C10—H10 0.9300
C1—S1 1.7425 (19) C11—C12 1.411 (3)
C2—C3 1.368 (3) C11—C18 1.502 (3)
C2—H2 0.9300 C12—C13 1.363 (3)
C3—C4 1.382 (3) C12—H12 0.9300
C3—H3 0.9300 C13—C14 1.430 (2)
C4—C5 1.379 (3) C13—C17 1.497 (3)
C4—H4 0.9300 C14—C15 1.406 (2)
C5—C6 1.386 (3) C15—C16 1.364 (2)
C5—H5 0.9300 C15—H15 0.9300
C6—C7 1.454 (2) C16—S1 1.7428 (17)
C7—C8 1.370 (2) C17—H17A 0.9600
C7—C16 1.418 (2) C17—H17B 0.9600
C8—C9 1.410 (2) C17—H17C 0.9600
C8—H8 0.9300 C18—H18A 0.9600
C9—C10 1.409 (2) C18—H18B 0.9600
C9—C14 1.425 (2) C18—H18C 0.9600
C2—C1—C6 121.14 (18) C10—C11—C18 122.00 (19)
C2—C1—S1 125.84 (16) C12—C11—C18 119.55 (19)
C6—C1—S1 113.01 (13) C13—C12—C11 123.04 (17)
C3—C2—C1 118.62 (19) C13—C12—H12 118.5
C3—C2—H2 120.7 C11—C12—H12 118.5
C1—C2—H2 120.7 C12—C13—C14 118.76 (16)
C2—C3—C4 120.96 (19) C12—C13—C17 120.64 (17)
C2—C3—H3 119.5 C14—C13—C17 120.59 (16)
C4—C3—H3 119.5 C15—C14—C9 119.19 (16)
C5—C4—C3 120.53 (19) C15—C14—C13 121.95 (16)
C5—C4—H4 119.7 C9—C14—C13 118.85 (15)
C3—C4—H4 119.7 C16—C15—C14 119.62 (16)
C4—C5—C6 119.81 (19) C16—C15—H15 120.2
C4—C5—H5 120.1 C14—C15—H15 120.2
C6—C5—H5 120.1 C15—C16—C7 122.13 (16)
C5—C6—C1 118.93 (16) C15—C16—S1 125.46 (14)
C5—C6—C7 129.09 (17) C7—C16—S1 112.39 (13)
C1—C6—C7 111.98 (15) C13—C17—H17A 109.5
C8—C7—C16 118.80 (15) C13—C17—H17B 109.5
C8—C7—C6 129.86 (16) H17A—C17—H17B 109.5
C16—C7—C6 111.34 (15) C13—C17—H17C 109.5
C7—C8—C9 120.82 (16) H17A—C17—H17C 109.5
C7—C8—H8 119.6 H17B—C17—H17C 109.5
C9—C8—H8 119.6 C11—C18—H18A 109.5
C10—C9—C8 121.39 (16) C11—C18—H18B 109.5
C10—C9—C14 119.18 (16) H18A—C18—H18B 109.5
C8—C9—C14 119.43 (15) C11—C18—H18C 109.5
C11—C10—C9 121.72 (18) H18A—C18—H18C 109.5
C11—C10—H10 119.1 H18B—C18—H18C 109.5
C9—C10—H10 119.1 C1—S1—C16 91.28 (9)
C10—C11—C12 118.42 (17)
C6—C1—C2—C3 0.7 (3) C18—C11—C12—C13 178.60 (19)
S1—C1—C2—C3 179.28 (17) C11—C12—C13—C14 0.9 (3)
C1—C2—C3—C4 −0.1 (3) C11—C12—C13—C17 −177.74 (17)
C2—C3—C4—C5 −0.2 (4) C10—C9—C14—C15 −179.87 (16)
C3—C4—C5—C6 0.0 (3) C8—C9—C14—C15 0.4 (3)
C4—C5—C6—C1 0.6 (3) C10—C9—C14—C13 1.3 (2)
C4—C5—C6—C7 −179.00 (19) C8—C9—C14—C13 −178.50 (16)
C2—C1—C6—C5 −0.9 (3) C12—C13—C14—C15 179.42 (17)
S1—C1—C6—C5 −179.67 (14) C17—C13—C14—C15 −1.9 (3)
C2—C1—C6—C7 178.73 (18) C12—C13—C14—C9 −1.7 (3)
S1—C1—C6—C7 0.0 (2) C17—C13—C14—C9 176.94 (16)
C5—C6—C7—C8 0.2 (3) C9—C14—C15—C16 −0.2 (3)
C1—C6—C7—C8 −179.43 (18) C13—C14—C15—C16 178.66 (17)
C5—C6—C7—C16 −179.98 (18) C14—C15—C16—C7 −0.3 (3)
C1—C6—C7—C16 0.4 (2) C14—C15—C16—S1 −178.84 (14)
C16—C7—C8—C9 −0.3 (3) C8—C7—C16—C15 0.5 (3)
C6—C7—C8—C9 179.59 (17) C6—C7—C16—C15 −179.40 (17)
C7—C8—C9—C10 −179.90 (16) C8—C7—C16—S1 179.24 (13)
C7—C8—C9—C14 −0.1 (3) C6—C7—C16—S1 −0.65 (19)
C8—C9—C10—C11 179.83 (18) C2—C1—S1—C16 −179.0 (2)
C14—C9—C10—C11 0.1 (3) C6—C1—S1—C16 −0.29 (15)
C9—C10—C11—C12 −0.9 (3) C15—C16—S1—C1 179.24 (18)
C9—C10—C11—C18 −179.07 (19) C7—C16—S1—C1 0.54 (14)
C10—C11—C12—C13 0.4 (3)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C17—H17C···Cg1i 0.96 2.68 3.486 (2) 142
C18—H18A···Cg2ii 0.96 2.75 3.649 (3) 155

Symmetry codes: (i) −x+1, −y, −z+1; (ii) x+1, y, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT2861).

References

  1. Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
  2. Bruker (2004). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Dzhurayev, A. D., Karimkulov, K. M., Makhsumov, A. G. & Amanov, N. (1992). Khim. Farm. Zh.26, 73–75.
  4. El-Maghraby, A. A., Haroun, B. & &Mohammed, N. A. (1984). Egypt. J. Pharm. Sci.23, 327–336.
  5. Gewald, K., Schinke, E. & Botcher, H. (1996). Chem. Ber.99, 99–100.
  6. Harrison, W. T. A., Yathirajan, H. S., Ashalatha, B. V., Vijaya Raj, K. K. & Narayana, B. (2006). Acta Cryst. E62, o3732–o3734.
  7. Palani, K., Amaladass, P., Mohanakrishnan, A. K. & Ponnuswamy, M. N. (2006). Acta Cryst. E62, o49–o51.
  8. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  9. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  10. Spek, A. L. (2003). J. Appl. Cryst.36, 7–13.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809003456/bt2861sup1.cif

e-65-0o440-sup1.cif (17KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809003456/bt2861Isup2.hkl

e-65-0o440-Isup2.hkl (145.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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