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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Jan 8;65(Pt 2):m149. doi: 10.1107/S1600536808042906

Hexakis(1-methyl-1H-imidazole-κN 3)cobalt(II) dibromide dihydrate

Rufu Yao a,*
PMCID: PMC2968233  PMID: 21581762

Abstract

The asymmetric unit of the title compound, [Co(C4H6N2)6]Br2·2H2O, contains one-half of the centrosymmetric cation, one Br atom and one water mol­ecule. The CoII atom, lying on an inversion center, has a distorted octa­hedral geometry, defined by six N atoms from six 1-methyl­imidazole ligands. In the crystal structure, intra- and inter­molecular O—H⋯Br hydrogen bonds link pairs of uncoordinated water mol­ecules and bromide anions.

Related literature

For general background, see: Lin et al. (2007); Rogers & Seddon (2003); Xie et al. (2008). For a related structure, see: Baca et al. (2005).graphic file with name e-65-0m149-scheme1.jpg

Experimental

Crystal data

  • [Co(C4H6N2)6]Br2·2H2O

  • M r = 747.41

  • Monoclinic, Inline graphic

  • a = 8.182 (2) Å

  • b = 13.573 (2) Å

  • c = 16.2340 (19) Å

  • β = 111.12 (4)°

  • V = 1681.8 (7) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 2.93 mm−1

  • T = 298 (2) K

  • 0.40 × 0.30 × 0.30 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2001) T min = 0.363, T max = 0.416

  • 16985 measured reflections

  • 3294 independent reflections

  • 2710 reflections with I > 2σ(I)

  • R int = 0.071

Refinement

  • R[F 2 > 2σ(F 2)] = 0.037

  • wR(F 2) = 0.103

  • S = 1.04

  • 3294 reflections

  • 187 parameters

  • H-atom parameters constrained

  • Δρmax = 0.86 e Å−3

  • Δρmin = −0.36 e Å−3

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808042906/hk2594sup1.cif

e-65-0m149-sup1.cif (19.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808042906/hk2594Isup2.hkl

e-65-0m149-Isup2.hkl (161.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected geometric parameters (Å, °).

Co1—N3 2.174 (2)
Co1—N5 2.182 (2)
Co1—N1 2.207 (2)
N3i—Co1—N3 180.0
N3—Co1—N5 88.07 (8)
N3—Co1—N5i 91.93 (8)
N5—Co1—N5i 180.0
N3i—Co1—N1 87.52 (8)
N3—Co1—N1 92.48 (8)
N5—Co1—N1 89.43 (8)
N5i—Co1—N1 90.57 (8)
N1i—Co1—N1 180.00 (11)

Symmetry code: (i) Inline graphic.

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O1W—H1WA⋯Br1ii 0.85 2.57 3.371 (3) 157
O1W—H1WB⋯Br1 0.86 2.51 3.338 (3) 164

Symmetry code: (ii) Inline graphic.

Acknowledgments

This work was supported by the National Natural Science Foundation of China (grant No. 20871039).

supplementary crystallographic information

Comment

Ionothermal synthesis of novel organic-inorganic hybrid materials are not accessible by traditional hydro- or solvothermal reactions (Rogers & Seddon, 2003, Xie et al., 2008, Lin et al., 2007). We report herein the crystal structure of the title compound.

The asymmetric unit of the title compound (Fig. 1) contains one-half of the centrosymmetric cation, one Br atom and one water molecule. The CoII atom lying on the inversion center of the centrosymmetric cation has a distorted octahedral geometry (Table 1). It is coordinated by six N atoms from six 1-methylimidazole ligands, where N3, N3i, N5 and N5i atoms comprise the equatorial plane, and the other two N atoms, N1 and N1i, occupy the axial positions [symmetry code: (i) 1 - x, 2 - y, 1 - z]. The Co-N bonds [average value = 2.1877 (2) Å] are longer than the Ni-N bonds [average value = 2.065 Å] in the reported Ni complex with the same ligand (Baca et al., 2005).

In the crystal structure, intra- and intermolecular O-H···Br hydrogen bonds (Table 2) link the pairs of uncoordinated water and bromide anions (Fig. 2), in which they may be effective in the stabilization of the structure.

Experimental

CO(NO3)2.6H2O (0.9 g) and N-methyl imidazole (0.5 g) were placed in a Teflon-line stainless-steel autoclave (25 ml) mixed with 1-ethyl-3-methyl- imidazolium (EMIBr)(1.0 g). The mixtures were heated at 423 K for 3 d, followed by cooling slowly to room temperature. The red block crystals were collected.

Refinement

H atoms were positioned geometrically, with O-H = 0.8544 and 0.8553 Å (for H2O) and C-H = 0.93 and 0.96 Å for aromatic and methyl H, respectively, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C,O), where x = 1.2 for aromatic H and x = 1.5 for all other H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at 30% probability level [symmetry code: (i) 1 - x, 2 - y, 1 - z].

Fig. 2.

Fig. 2.

A partial packing diagram of the title compound. Hydrogen bonds are shown as dashed lines.

Crystal data

[Co(C4H6N2)6]Br2·2H2O F(000) = 762
Mr = 747.41 Dx = 1.47 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 7560 reflections
a = 8.182 (2) Å θ = 2.5–27.1°
b = 13.573 (2) Å µ = 2.93 mm1
c = 16.2340 (19) Å T = 298 K
β = 111.12 (4)° Block, red
V = 1681.8 (7) Å3 0.40 × 0.30 × 0.30 mm
Z = 2

Data collection

Bruker SMART CCD area-detector diffractometer 3294 independent reflections
Radiation source: fine-focus sealed tube 2710 reflections with I > 2σ(I)
graphite Rint = 0.071
φ and ω scans θmax = 26.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2001) h = −9→10
Tmin = 0.363, Tmax = 0.416 k = −15→16
16985 measured reflections l = −20→20

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0649P)2 + 0.2015P] where P = (Fo2 + 2Fc2)/3
3294 reflections (Δ/σ)max = 0.001
187 parameters Δρmax = 0.86 e Å3
0 restraints Δρmin = −0.36 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Co1 0.5000 0.5000 0.5000 0.03601 (15)
Br1 0.78110 (4) 0.87845 (2) 0.56859 (2) 0.05972 (14)
O1W 0.4155 (4) 0.9171 (2) 0.3940 (2) 0.1105 (11)
H1WA 0.3888 0.9772 0.3983 0.166*
H1WB 0.4947 0.9012 0.4433 0.166*
N1 0.3436 (3) 0.62856 (14) 0.51072 (14) 0.0415 (5)
N2 0.2626 (3) 0.77351 (16) 0.54359 (16) 0.0490 (5)
N3 0.7232 (3) 0.54470 (15) 0.61490 (13) 0.0419 (5)
N4 0.9664 (3) 0.61811 (16) 0.70086 (15) 0.0504 (6)
N5 0.4033 (3) 0.41844 (16) 0.58900 (13) 0.0433 (5)
N6 0.3497 (3) 0.30035 (18) 0.66980 (15) 0.0539 (6)
C1 0.3966 (3) 0.71343 (19) 0.54940 (17) 0.0449 (6)
H1A 0.5138 0.7302 0.5777 0.054*
C2 0.1629 (4) 0.6342 (2) 0.4783 (2) 0.0543 (7)
H2A 0.0873 0.5845 0.4474 0.065*
C3 0.1130 (4) 0.7236 (2) 0.4986 (2) 0.0567 (7)
H3A −0.0012 0.7463 0.4845 0.068*
C4 0.2759 (5) 0.8748 (2) 0.5786 (3) 0.0792 (12)
H4A 0.3971 0.8920 0.6075 0.119*
H4B 0.2173 0.8785 0.6202 0.119*
H4C 0.2220 0.9198 0.5309 0.119*
C5 0.8328 (3) 0.61851 (19) 0.62204 (17) 0.0444 (6)
H5A 0.8195 0.6651 0.5781 0.053*
C6 0.7915 (4) 0.4943 (2) 0.69380 (18) 0.0521 (7)
H6A 0.7419 0.4386 0.7085 0.063*
C7 0.9419 (4) 0.5382 (2) 0.74685 (19) 0.0564 (7)
H7A 1.0137 0.5181 0.8030 0.068*
C8 1.1066 (5) 0.6909 (3) 0.7314 (3) 0.0799 (10)
H8A 1.0926 0.7386 0.6857 0.120*
H8B 1.2178 0.6586 0.7457 0.120*
H8C 1.1017 0.7234 0.7830 0.120*
C9 0.4120 (4) 0.3232 (2) 0.60596 (17) 0.0480 (6)
H9A 0.4561 0.2770 0.5771 0.058*
C10 0.3301 (4) 0.4577 (2) 0.6465 (2) 0.0626 (8)
H10A 0.3063 0.5242 0.6502 0.075*
C11 0.2980 (5) 0.3862 (2) 0.6964 (2) 0.0663 (9)
H11A 0.2502 0.3940 0.7400 0.080*
C12 0.3336 (6) 0.2008 (3) 0.7011 (2) 0.0862 (12)
H12A 0.3805 0.1539 0.6713 0.129*
H12B 0.2123 0.1863 0.6890 0.129*
H12C 0.3973 0.1970 0.7636 0.129*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Co1 0.0387 (3) 0.0319 (3) 0.0416 (2) 0.00008 (18) 0.0197 (2) 0.00050 (18)
Br1 0.0506 (2) 0.0458 (2) 0.0787 (2) −0.00077 (12) 0.01838 (17) −0.01020 (13)
O1W 0.099 (2) 0.096 (2) 0.109 (2) 0.0179 (17) 0.0042 (18) −0.0335 (18)
N1 0.0405 (12) 0.0390 (12) 0.0502 (11) 0.0004 (9) 0.0227 (10) −0.0009 (9)
N2 0.0508 (14) 0.0370 (12) 0.0683 (13) 0.0033 (9) 0.0325 (11) −0.0024 (10)
N3 0.0450 (12) 0.0370 (11) 0.0444 (11) 0.0026 (9) 0.0168 (9) 0.0005 (9)
N4 0.0388 (12) 0.0544 (14) 0.0536 (13) 0.0033 (10) 0.0112 (11) 0.0010 (10)
N5 0.0483 (13) 0.0421 (12) 0.0465 (11) −0.0038 (10) 0.0255 (10) −0.0006 (9)
N6 0.0603 (15) 0.0592 (15) 0.0490 (12) −0.0095 (12) 0.0278 (11) 0.0090 (11)
C1 0.0404 (14) 0.0441 (14) 0.0560 (14) 0.0005 (11) 0.0244 (12) −0.0027 (12)
C2 0.0385 (15) 0.0564 (17) 0.0677 (17) 0.0003 (12) 0.0185 (13) −0.0103 (14)
C3 0.0411 (15) 0.0606 (18) 0.0697 (17) 0.0099 (13) 0.0217 (13) −0.0048 (14)
C4 0.083 (3) 0.0403 (18) 0.130 (3) 0.0009 (15) 0.057 (3) −0.0167 (17)
C5 0.0403 (14) 0.0454 (15) 0.0463 (14) 0.0014 (11) 0.0143 (12) 0.0047 (11)
C6 0.0621 (18) 0.0408 (15) 0.0522 (15) 0.0038 (13) 0.0191 (14) 0.0072 (12)
C7 0.0588 (19) 0.0551 (17) 0.0480 (15) 0.0161 (14) 0.0104 (14) 0.0064 (13)
C8 0.056 (2) 0.083 (3) 0.082 (2) −0.0173 (18) 0.0011 (17) −0.0009 (19)
C9 0.0593 (17) 0.0474 (16) 0.0450 (13) −0.0076 (12) 0.0284 (12) 0.0002 (11)
C10 0.076 (2) 0.0598 (18) 0.0685 (18) 0.0081 (16) 0.0465 (17) 0.0004 (15)
C11 0.074 (2) 0.080 (2) 0.0643 (18) 0.0034 (17) 0.0493 (17) 0.0025 (16)
C12 0.121 (3) 0.071 (2) 0.082 (2) −0.017 (2) 0.056 (2) 0.0216 (19)

Geometric parameters (Å, °)

Co1—N3i 2.174 (2) N6—C12 1.466 (4)
Co1—N3 2.174 (2) C1—H1A 0.9300
Co1—N5 2.182 (2) C2—C3 1.359 (4)
Co1—N5i 2.182 (2) C2—H2A 0.9300
Co1—N1i 2.207 (2) C3—H3A 0.9300
Co1—N1 2.207 (2) C4—H4A 0.9600
O1W—H1WA 0.8544 C4—H4B 0.9600
O1W—H1WB 0.8553 C4—H4C 0.9600
N1—C1 1.309 (3) C5—H5A 0.9300
N1—C2 1.381 (4) C6—C7 1.359 (4)
N2—C1 1.342 (3) C6—H6A 0.9300
N2—C3 1.359 (4) C7—H7A 0.9300
N2—C4 1.477 (4) C8—H8A 0.9600
N3—C5 1.322 (3) C8—H8B 0.9600
N3—C6 1.380 (3) C8—H8C 0.9600
N4—C5 1.351 (3) C9—H9A 0.9300
N4—C7 1.372 (4) C10—C11 1.349 (4)
N4—C8 1.458 (4) C10—H10A 0.9300
N5—C9 1.319 (4) C11—H11A 0.9300
N5—C10 1.384 (3) C12—H12A 0.9600
N6—C9 1.346 (3) C12—H12B 0.9600
N6—C11 1.362 (4) C12—H12C 0.9600
N3i—Co1—N3 180.0 N2—C3—C2 106.5 (2)
N3i—Co1—N5 91.93 (8) N2—C3—H3A 126.8
N3—Co1—N5 88.07 (8) C2—C3—H3A 126.8
N3i—Co1—N5i 88.07 (8) N2—C4—H4A 109.5
N3—Co1—N5i 91.93 (8) N2—C4—H4B 109.5
N5—Co1—N5i 180.0 H4A—C4—H4B 109.5
N3i—Co1—N1i 92.48 (8) N2—C4—H4C 109.5
N3—Co1—N1i 87.52 (8) H4A—C4—H4C 109.5
N5—Co1—N1i 90.57 (8) H4B—C4—H4C 109.5
N5i—Co1—N1i 89.43 (8) N3—C5—N4 111.9 (2)
N3i—Co1—N1 87.52 (8) N3—C5—H5A 124.1
N3—Co1—N1 92.48 (8) N4—C5—H5A 124.1
N5—Co1—N1 89.43 (8) C7—C6—N3 110.1 (3)
N5i—Co1—N1 90.57 (8) C7—C6—H6A 125.0
N1i—Co1—N1 180.00 (11) N3—C6—H6A 125.0
H1WA—O1W—H1WB 107.2 C6—C7—N4 106.2 (2)
C1—N1—C2 105.0 (2) C6—C7—H7A 126.9
C1—N1—Co1 129.22 (18) N4—C7—H7A 126.9
C2—N1—Co1 125.80 (17) N4—C8—H8A 109.5
C1—N2—C3 106.9 (2) N4—C8—H8B 109.5
C1—N2—C4 126.4 (2) H8A—C8—H8B 109.5
C3—N2—C4 126.7 (2) N4—C8—H8C 109.5
C5—N3—C6 105.0 (2) H8A—C8—H8C 109.5
C5—N3—Co1 128.35 (17) H8B—C8—H8C 109.5
C6—N3—Co1 126.31 (18) N5—C9—N6 112.3 (2)
C5—N4—C7 106.9 (2) N5—C9—H9A 123.8
C5—N4—C8 126.1 (3) N6—C9—H9A 123.8
C7—N4—C8 127.0 (3) C11—C10—N5 110.7 (3)
C9—N5—C10 103.9 (2) C11—C10—H10A 124.7
C9—N5—Co1 129.10 (17) N5—C10—H10A 124.7
C10—N5—Co1 126.8 (2) C10—C11—N6 106.0 (2)
C9—N6—C11 107.1 (2) C10—C11—H11A 127.0
C9—N6—C12 125.8 (3) N6—C11—H11A 127.0
C11—N6—C12 127.0 (2) N6—C12—H12A 109.5
N1—C1—N2 112.3 (2) N6—C12—H12B 109.5
N1—C1—H1A 123.8 H12A—C12—H12B 109.5
N2—C1—H1A 123.8 N6—C12—H12C 109.5
C3—C2—N1 109.4 (3) H12A—C12—H12C 109.5
C3—C2—H2A 125.3 H12B—C12—H12C 109.5
N1—C2—H2A 125.3
N3i—Co1—N1—C1 −157.5 (2) C3—N2—C1—N1 0.5 (3)
N3—Co1—N1—C1 22.5 (2) C4—N2—C1—N1 −178.9 (3)
N5—Co1—N1—C1 110.5 (2) C1—N1—C2—C3 0.3 (3)
N5i—Co1—N1—C1 −69.5 (2) Co1—N1—C2—C3 178.83 (19)
N3i—Co1—N1—C2 24.3 (2) C1—N2—C3—C2 −0.3 (3)
N3—Co1—N1—C2 −155.7 (2) C4—N2—C3—C2 179.1 (3)
N5—Co1—N1—C2 −67.7 (2) N1—C2—C3—N2 0.0 (3)
N5i—Co1—N1—C2 112.3 (2) C6—N3—C5—N4 −0.1 (3)
N5—Co1—N3—C5 −161.6 (2) Co1—N3—C5—N4 −173.74 (17)
N5i—Co1—N3—C5 18.4 (2) C7—N4—C5—N3 0.7 (3)
N1i—Co1—N3—C5 107.7 (2) C8—N4—C5—N3 −177.7 (3)
N1—Co1—N3—C5 −72.3 (2) C5—N3—C6—C7 −0.5 (3)
N5—Co1—N3—C6 26.0 (2) Co1—N3—C6—C7 173.29 (18)
N5i—Co1—N3—C6 −154.0 (2) N3—C6—C7—N4 0.9 (3)
N1i—Co1—N3—C6 −64.6 (2) C5—N4—C7—C6 −0.9 (3)
N1—Co1—N3—C6 115.4 (2) C8—N4—C7—C6 177.4 (3)
N3i—Co1—N5—C9 78.8 (2) C10—N5—C9—N6 −0.1 (3)
N3—Co1—N5—C9 −101.2 (2) Co1—N5—C9—N6 175.28 (18)
N1i—Co1—N5—C9 −13.7 (2) C11—N6—C9—N5 −0.3 (3)
N1—Co1—N5—C9 166.3 (2) C12—N6—C9—N5 177.0 (3)
N3i—Co1—N5—C10 −106.8 (2) C9—N5—C10—C11 0.4 (4)
N3—Co1—N5—C10 73.2 (2) Co1—N5—C10—C11 −175.1 (2)
N1i—Co1—N5—C10 160.7 (2) N5—C10—C11—N6 −0.6 (4)
N1—Co1—N5—C10 −19.3 (2) C9—N6—C11—C10 0.5 (4)
C2—N1—C1—N2 −0.4 (3) C12—N6—C11—C10 −176.8 (3)
Co1—N1—C1—N2 −178.95 (16)

Symmetry codes: (i) −x+1, −y+1, −z+1.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O1W—H1WA···Br1ii 0.85 2.57 3.371 (3) 157
O1W—H1WB···Br1 0.86 2.51 3.338 (3) 164

Symmetry codes: (ii) −x+1, −y+2, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HK2594).

References

  1. Baca, S. G., Filippova, I. G., Franz, C, P., Ambrus, C., Gdaniec, M., Stoeckli-Evans, H., Simonov, Y. A., Gherco, O. A., Bejan, T., Gerbeleu, N. & Decurtins, S. (2005). Inorg. Chim. Acta, 358, 1762–1770.
  2. Bruker (2001). SAINT, SMART and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Lin, Z. J., Wragg, D. S., Warren, J. E. & Morris, R. E. (2007). J. Am. Chem. Soc.129, 10334–10335. [DOI] [PubMed]
  4. Rogers, R. D. & Seddon, K. R. (2003). Science, 302, 792–793. [DOI] [PubMed]
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Xie, Z. L., Feng, M. L., Li, J. R. & Huang, X. Y. (2008). Inorg. Chem. Commun.11, 1143–1146.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808042906/hk2594sup1.cif

e-65-0m149-sup1.cif (19.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536808042906/hk2594Isup2.hkl

e-65-0m149-Isup2.hkl (161.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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