Abstract
The title Schiff base compound, C10H13NO3, obtained by the reaction of 2-hydroxy-3-methoxybenzaldehyde and 2-aminoethanol in methanol solution, crystallizes in a zwitterionic form, in which the molecule adopts a trans configuration about the central C=N bond. An intramolecular N—H⋯O hydrogen bond occurs. In the crystal structure, molecules are linked into chains by intermolecular O—H⋯O hydrogen bonding.
Related literature
For related structures, see: Cui et al. (1999 ▶); Dong et al. (2007 ▶); Li et al. (2005 ▶); Ng (2008 ▶); Oshio et al. (2003 ▶); Sun et al. (2006 ▶). For reference structural data, see: Allen et al. (1987 ▶).
Experimental
Crystal data
C10H13NO3
M r = 195.21
Orthorhombic,
a = 14.148 (6) Å
b = 6.587 (3) Å
c = 10.760 (4) Å
V = 1002.8 (7) Å3
Z = 4
Mo Kα radiation
μ = 0.10 mm−1
T = 295 K
0.30 × 0.30 × 0.12 mm
Data collection
Bruker SMART APEX CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.974, T max = 0.991
7345 measured reflections
1041 independent reflections
923 reflections with I > 2σ(I)
R int = 0.037
Refinement
R[F 2 > 2σ(F 2)] = 0.034
wR(F 2) = 0.084
S = 1.07
1041 reflections
127 parameters
1 restraint
H-atom parameters constrained
Δρmax = 0.09 e Å−3
Δρmin = −0.15 e Å−3
Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809005297/hb2911sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005297/hb2911Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
N1—H1⋯O1 | 0.86 | 1.95 | 2.617 (2) | 134 |
O3—H3⋯O1i | 0.82 | 1.95 | 2.741 (3) | 161 |
Symmetry code: (i) .
Acknowledgments
This work was supported by the Key Laboratory of Colloid Interface Chemistry of the Ministry of Education (200707).
supplementary crystallographic information
Comment
The title compound, (I), derived from 3-methoxy-2-hydroxybenzaldehyde and 2-aminoethanol, is a potential NO3 tetradentate Schiff base ligand and its complexes with Cd(II), Cu(II), Zn(II) and Fe(III) have been reported (Cui et al., 1999; Dong et al., 2007; Li et al., 2005; Oshio et al., 2003). Here, the structure of (I) is described.
The title molecule exists in a zwitterionic form with a strong intramolecular N—H···O hydrogen bond (Table 1) between the NH+ and the phenolate O-, as shown in Fig. 1. The bond lengths and angles are within normal ranges (Allen et al.,1987). The N1=C8 [1.294 (3) Å] and N1—C8 [1.453 (3) Å] bond distances are comparable to these found in similar Schiff base compounds, such as 2,4-Dibromo-6-(2-hydroxyethyliminiomethyl)- phenolate [1.277 (5) and 1.451 (4) Å] (Sun et al., 2006) and 4-chloro-2-[tris(hydroxymethyl)methyliminiomethyl]phenolate [1.288 (2) and 1.467 (2) Å] (Ng, 2008). As expected, the molecule adopts a trans configuration about the central C=N bond. In the crystal structure, O3—H3···O1i (symmetry code as given in Table 1) intermolecular hydrogen bonds formed between the hydroxy and oxygen of phenolate link the molecules into a one-dimension supramolecular chain.
Experimental
3-Methoxy-2-hydroxybenzaldehyde (0.152 g, 1 mmol) and equimolar 2-aminoethanol (0.061 g, 1 mmol) were refluxed for 30 min in methanol solution (15 ml). The reaction mixtures were cooled to room temprature and filtered. After keeping the filtrate in air for 3 d, yellow blocks of (I) (yield 66%; mp 338–339 K) were obtained.
Refinement
H atoms were placed at calculated positions and refined in the riding-model approximation, with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for sp2 H atoms, C—H = 0.96 Å and Uiso(H) = 1.5Ueq(C) for methyl H atoms, C—H = 0.97 Å and Uiso(H) = 1.2Ueq(C) for methylene H atoms, N—H = 0.86 Å and Uiso(H) = 1.2Ueq(C) for imino group, and O—H = 0.82 Å and Uiso(H) = 1.5Ueq(C) for hydroxy. Friedel pairs were merged.
Figures
Fig. 1.
The structure of (I) with displacement ellipsoids drawn at the 50% probability level. The N—H···O hydrogen bond is shown as a dashed line.
Crystal data
C10H13NO3 | F(000) = 416 |
Mr = 195.21 | Dx = 1.293 Mg m−3 |
Orthorhombic, Pca21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2ac | Cell parameters from 1828 reflections |
a = 14.148 (6) Å | θ = 2.9–20.4° |
b = 6.587 (3) Å | µ = 0.10 mm−1 |
c = 10.760 (4) Å | T = 295 K |
V = 1002.8 (7) Å3 | Block, yellow |
Z = 4 | 0.30 × 0.30 × 0.12 mm |
Data collection
Bruker APEX CCD diffractometer | 1041 independent reflections |
Radiation source: fine-focus sealed tube | 923 reflections with I > 2σ(I) |
graphite | Rint = 0.037 |
φ and ω scans | θmax = 26.0°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | h = −17→17 |
Tmin = 0.974, Tmax = 0.991 | k = −8→8 |
7345 measured reflections | l = −12→13 |
Refinement
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.084 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0473P)2 + 0.0337P] where P = (Fo2 + 2Fc2)/3 |
1041 reflections | (Δ/σ)max < 0.001 |
127 parameters | Δρmax = 0.09 e Å−3 |
1 restraint | Δρmin = −0.15 e Å−3 |
Special details
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
x | y | z | Uiso*/Ueq | ||
C1 | 0.53278 (16) | 0.7444 (3) | 0.0860 (2) | 0.0408 (5) | |
C2 | 0.57651 (16) | 0.9338 (3) | 0.0535 (2) | 0.0451 (6) | |
C3 | 0.69788 (18) | 1.1717 (4) | 0.1022 (3) | 0.0718 (9) | |
H3A | 0.6519 | 1.2763 | 0.1164 | 0.108* | |
H3B | 0.7207 | 1.1807 | 0.0183 | 0.108* | |
H3C | 0.7497 | 1.1885 | 0.1588 | 0.108* | |
C4 | 0.5396 (2) | 1.0535 (4) | −0.0390 (3) | 0.0557 (7) | |
H4 | 0.5680 | 1.1776 | −0.0566 | 0.067* | |
C5 | 0.4599 (2) | 0.9927 (5) | −0.1078 (3) | 0.0625 (8) | |
H5 | 0.4366 | 1.0750 | −0.1710 | 0.075* | |
C6 | 0.41744 (18) | 0.8135 (4) | −0.0814 (3) | 0.0570 (7) | |
H6 | 0.3655 | 0.7718 | −0.1278 | 0.068* | |
C7 | 0.45145 (15) | 0.6891 (4) | 0.0160 (2) | 0.0436 (5) | |
C8 | 0.39971 (16) | 0.5130 (4) | 0.0485 (2) | 0.0460 (6) | |
H8 | 0.3479 | 0.4790 | −0.0006 | 0.055* | |
C9 | 0.36073 (17) | 0.2262 (4) | 0.1804 (3) | 0.0535 (6) | |
H9A | 0.4005 | 0.1091 | 0.1961 | 0.064* | |
H9B | 0.3173 | 0.1915 | 0.1140 | 0.064* | |
C10 | 0.30532 (16) | 0.2758 (4) | 0.2962 (3) | 0.0529 (6) | |
H10A | 0.2717 | 0.1553 | 0.3232 | 0.064* | |
H10B | 0.3490 | 0.3137 | 0.3617 | 0.064* | |
N1 | 0.41934 (14) | 0.3958 (3) | 0.1415 (2) | 0.0478 (5) | |
H1 | 0.4701 | 0.4199 | 0.1829 | 0.057* | |
O1 | 0.56592 (11) | 0.6322 (2) | 0.17429 (18) | 0.0486 (4) | |
O2 | 0.65545 (11) | 0.9784 (3) | 0.1213 (2) | 0.0564 (5) | |
O3 | 0.23996 (12) | 0.4345 (2) | 0.2785 (2) | 0.0584 (5) | |
H3 | 0.1946 | 0.3924 | 0.2387 | 0.088* |
Atomic displacement parameters (Å2)
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0358 (11) | 0.0387 (12) | 0.0478 (13) | 0.0046 (9) | 0.0063 (10) | −0.0074 (11) |
C2 | 0.0393 (12) | 0.0407 (13) | 0.0553 (16) | 0.0030 (10) | 0.0127 (11) | −0.0106 (12) |
C3 | 0.0623 (17) | 0.0421 (15) | 0.111 (3) | −0.0143 (14) | 0.0175 (19) | −0.0154 (16) |
C4 | 0.0608 (17) | 0.0435 (14) | 0.0629 (17) | 0.0038 (13) | 0.0206 (15) | 0.0050 (13) |
C5 | 0.0670 (18) | 0.0703 (19) | 0.0502 (16) | 0.0090 (15) | 0.0064 (14) | 0.0132 (15) |
C6 | 0.0507 (14) | 0.0726 (18) | 0.0477 (15) | 0.0022 (13) | −0.0017 (12) | 0.0014 (14) |
C7 | 0.0378 (12) | 0.0484 (13) | 0.0445 (13) | 0.0014 (11) | 0.0028 (10) | −0.0071 (12) |
C8 | 0.0341 (12) | 0.0521 (14) | 0.0520 (14) | 0.0004 (10) | −0.0026 (11) | −0.0117 (12) |
C9 | 0.0420 (13) | 0.0424 (13) | 0.0760 (18) | −0.0020 (10) | −0.0002 (14) | 0.0002 (13) |
C10 | 0.0422 (12) | 0.0533 (15) | 0.0633 (16) | 0.0033 (11) | −0.0071 (12) | 0.0138 (13) |
N1 | 0.0354 (10) | 0.0481 (12) | 0.0600 (14) | −0.0036 (9) | −0.0025 (9) | −0.0050 (11) |
O1 | 0.0400 (8) | 0.0440 (9) | 0.0619 (11) | −0.0040 (7) | −0.0082 (8) | 0.0003 (9) |
O2 | 0.0436 (9) | 0.0433 (9) | 0.0822 (14) | −0.0083 (8) | 0.0020 (9) | −0.0062 (9) |
O3 | 0.0410 (9) | 0.0591 (10) | 0.0750 (13) | 0.0088 (9) | −0.0069 (9) | −0.0038 (10) |
Geometric parameters (Å, °)
C1—O1 | 1.291 (3) | C6—H6 | 0.9300 |
C1—C7 | 1.423 (3) | C7—C8 | 1.416 (3) |
C1—C2 | 1.436 (3) | C8—N1 | 1.294 (3) |
C2—O2 | 1.366 (3) | C8—H8 | 0.9300 |
C2—C4 | 1.373 (4) | C9—N1 | 1.453 (3) |
C3—O2 | 1.422 (3) | C9—C10 | 1.508 (4) |
C3—H3A | 0.9600 | C9—H9A | 0.9700 |
C3—H3B | 0.9600 | C9—H9B | 0.9700 |
C3—H3C | 0.9600 | C10—O3 | 1.409 (3) |
C4—C5 | 1.407 (4) | C10—H10A | 0.9700 |
C4—H4 | 0.9300 | C10—H10B | 0.9700 |
C5—C6 | 1.355 (4) | N1—H1 | 0.8600 |
C5—H5 | 0.9300 | O3—H3 | 0.8200 |
C6—C7 | 1.415 (4) | ||
O1—C1—C7 | 122.5 (2) | C6—C7—C1 | 121.3 (2) |
O1—C1—C2 | 121.3 (2) | C8—C7—C1 | 119.8 (2) |
C7—C1—C2 | 116.2 (2) | N1—C8—C7 | 124.6 (2) |
O2—C2—C4 | 125.1 (2) | N1—C8—H8 | 117.7 |
O2—C2—C1 | 114.1 (2) | C7—C8—H8 | 117.7 |
C4—C2—C1 | 120.8 (2) | N1—C9—C10 | 111.6 (2) |
O2—C3—H3A | 109.5 | N1—C9—H9A | 109.3 |
O2—C3—H3B | 109.5 | C10—C9—H9A | 109.3 |
H3A—C3—H3B | 109.5 | N1—C9—H9B | 109.3 |
O2—C3—H3C | 109.5 | C10—C9—H9B | 109.3 |
H3A—C3—H3C | 109.5 | H9A—C9—H9B | 108.0 |
H3B—C3—H3C | 109.5 | O3—C10—C9 | 113.0 (2) |
C2—C4—C5 | 121.5 (2) | O3—C10—H10A | 109.0 |
C2—C4—H4 | 119.2 | C9—C10—H10A | 109.0 |
C5—C4—H4 | 119.2 | O3—C10—H10B | 109.0 |
C6—C5—C4 | 119.5 (3) | C9—C10—H10B | 109.0 |
C6—C5—H5 | 120.2 | H10A—C10—H10B | 107.8 |
C4—C5—H5 | 120.2 | C8—N1—C9 | 124.0 (2) |
C5—C6—C7 | 120.6 (3) | C8—N1—H1 | 118.0 |
C5—C6—H6 | 119.7 | C9—N1—H1 | 118.0 |
C7—C6—H6 | 119.7 | C2—O2—C3 | 117.4 (2) |
C6—C7—C8 | 118.8 (2) | C10—O3—H3 | 109.5 |
O1—C1—C2—O2 | 1.6 (3) | C2—C1—C7—C6 | 1.1 (3) |
C7—C1—C2—O2 | −178.65 (19) | O1—C1—C7—C8 | 4.8 (3) |
O1—C1—C2—C4 | −178.8 (2) | C2—C1—C7—C8 | −175.0 (2) |
C7—C1—C2—C4 | 1.0 (3) | C6—C7—C8—N1 | −174.5 (2) |
O2—C2—C4—C5 | 177.5 (2) | C1—C7—C8—N1 | 1.8 (3) |
C1—C2—C4—C5 | −2.1 (3) | N1—C9—C10—O3 | 63.7 (3) |
C2—C4—C5—C6 | 1.0 (4) | C7—C8—N1—C9 | 174.2 (2) |
C4—C5—C6—C7 | 1.2 (4) | C10—C9—N1—C8 | −104.5 (3) |
C5—C6—C7—C8 | 174.0 (2) | C4—C2—O2—C3 | 5.8 (3) |
C5—C6—C7—C1 | −2.2 (4) | C1—C2—O2—C3 | −174.6 (2) |
O1—C1—C7—C6 | −179.1 (2) |
Hydrogen-bond geometry (Å, °)
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.86 | 1.95 | 2.617 (2) | 134 |
O3—H3···O1i | 0.82 | 1.95 | 2.741 (3) | 161 |
Symmetry codes: (i) x−1/2, −y+1, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB2911).
References
- Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
- Bruker (2002). SADABS, SAINT and SMART Bruker AXS Inc., Madison, Wisconsin, USA.
- Cui, X.-G., Hu, Q.-P. & Gong, J. (1999). Acta Chim. Sin.57, 189–195.
- Dong, J.-F., Li, L.-Z., Yu, W.-J., Cui, H. & Wang, D.-Q. (2007). Acta Cryst. E63, m1992.
- Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
- Li, L.-Z., Zhao, C., Ji, T.-X., Ji, H.-W., Yu, Y.-H., Guo, G.-Q. & Chao, H. (2005). J. Inorg. Biochem.99, 1076–1082. [DOI] [PubMed]
- Ng, S. W. (2008). Acta Cryst. E64, o2455. [DOI] [PMC free article] [PubMed]
- Oshio, H., Hoshino, N., Ito, T., Nakano, M., Renz, F. & Gutlich, P. (2003). Angew. Chem. Int. Ed. Engl.42, 223–225. [DOI] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Sun, Y.-X., Zhang, R., Tian, L.-J., Xu, L.-X. & Sun, S.-L. (2006). Acta Cryst. E62, o4433–o4435.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809005297/hb2911sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005297/hb2911Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report