Abstract
In the title compound, C16H17N3O2, symmetry-related molecules are linked into one-dimensional chains along the a axis by a combination of intermolecular O—H⋯N and O—H⋯O hydrogen bonds and weak π–π stacking interactions with a centroid–centroid distance of 3.5494 (12) Å.
Related literature
For recent crystal structure reports on the complexes formed with derivatives of 1,10-phenanthroline, see for example: Li et al. (2008 ▶) and Zhang et al. (2008 ▶).
Experimental
Crystal data
C16H17N3O2
M r = 283.33
Monoclinic,
a = 4.8480 (10) Å
b = 14.854 (3) Å
c = 18.858 (4) Å
β = 93.523 (3)°
V = 1355.5 (5) Å3
Z = 4
Mo Kα radiation
μ = 0.09 mm−1
T = 298 K
0.54 × 0.32 × 0.20 mm
Data collection
Bruker SMART APEX CCD diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.951, T max = 0.982
7520 measured reflections
2765 independent reflections
2149 reflections with I > 2σ(I)
R int = 0.030
Refinement
R[F 2 > 2σ(F 2)] = 0.047
wR(F 2) = 0.132
S = 1.03
2765 reflections
190 parameters
H-atom parameters constrained
Δρmax = 0.24 e Å−3
Δρmin = −0.16 e Å−3
Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809004929/lh2772sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809004929/lh2772Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O2—H5⋯O1i | 0.91 | 1.91 | 2.8254 (17) | 177 |
| O1—H4⋯N1ii | 0.83 | 2.08 | 2.8676 (18) | 158 |
Symmetry codes: (i)
; (ii)
.
supplementary crystallographic information
Comment
Derivatives of 1,10-phenanthroline play a vital role in a modern coordination chemistry and a number of complexes have been published with these types of compounds as ligands [see for example the recent publications by Li et al. (2008) and Zhang et al. (2008)]. An interest in designing new derivatives led to the synthesis the title compound, (I), and its crystal structure is reported herein.
The molecular structure of (I) is shown in Fig. 1. In the crystal structure, intermolecular O—H···N and O—H···O hydrogen bonds (see Table 1) connect symmetry related molecules to form 1-D chains along the a axis (see Fig. 2). In addition, within these chain there are weak π-π stacking interactions between symmetry related pyridyl rings, with the relevant distances being Cg1···Cg2iii = 3.5494 (12) Å, Cg1···Cg2iiiperp = 3.464 Å and α = 1.48° [symmetry code (iii) 1+x, y, z; Cg1 and Cg2 are the centroids of the C6C7C10-C12/N1 and C1—C5/N2 rings, respectively; Cg1···Cg2iiiperp is the perpendicular distance from ring Cg1 to ring Cg2iii; α is the dihedral angle between ring plane Cg1 and ring plane Cg2iii].
Experimental
2-Diethanolamine-1,10-phenanthroline (0.0523 g, 0.185 mmol) was dissolved into 10 ml methanol and the yellow single crystals were obtained after the solution had been allowed to stand at room temperature for one week.
Refinement
The H atoms of hydroxyl groups were found in a difference Fourier map and were included in 'as found' positions with d(O—H) = 0.83 & 0.91 Å; all other H atoms were placed in calculated positions with C—H = 0.93–0.97 Å. All H atoms were refined as riding, with Uiso(H) = 1.5eq(O) for hydroxyl group and Uiso(H) = 1.2Ueq(C) for other groups.
Figures
Fig. 1.
The molecular structure of (I), showing the the atom numbering scheme with thermal ellipsoids drawn at the 30% probability level
Fig. 2.
Part of the crystal structure of (I) showing hydrogen bonds (dashed lines) between symmetry realted molecules which form a one-dimensional chain along the a axis.
Crystal data
| C16H17N3O2 | F(000) = 600 |
| Mr = 283.33 | Dx = 1.388 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 2381 reflections |
| a = 4.848 (1) Å | θ = 2.6–27.3° |
| b = 14.854 (3) Å | µ = 0.09 mm−1 |
| c = 18.858 (4) Å | T = 298 K |
| β = 93.523 (3)° | Block, yellow |
| V = 1355.5 (5) Å3 | 0.54 × 0.32 × 0.20 mm |
| Z = 4 |
Data collection
| Bruker SMART APEX CCD diffractometer | 2765 independent reflections |
| Radiation source: fine-focus sealed tube | 2149 reflections with I > 2σ(I) |
| graphite | Rint = 0.030 |
| φ and ω scans | θmax = 26.5°, θmin = 1.8° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −5→6 |
| Tmin = 0.951, Tmax = 0.982 | k = −12→18 |
| 7520 measured reflections | l = −23→23 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.132 | H-atom parameters constrained |
| S = 1.02 | w = 1/[σ2(Fo2) + (0.0762P)2 + 0.108P] where P = (Fo2 + 2Fc2)/3 |
| 2765 reflections | (Δ/σ)max = 0.008 |
| 190 parameters | Δρmax = 0.24 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | −0.1483 (3) | 0.89542 (10) | 0.18581 (7) | 0.0333 (3) | |
| C2 | −0.2322 (3) | 0.81999 (11) | 0.22608 (8) | 0.0408 (4) | |
| H2 | −0.3697 | 0.7814 | 0.2077 | 0.049* | |
| C3 | −0.1090 (4) | 0.80542 (11) | 0.29126 (8) | 0.0439 (4) | |
| H3 | −0.1645 | 0.7569 | 0.3181 | 0.053* | |
| C4 | 0.1020 (3) | 0.86265 (10) | 0.31895 (8) | 0.0391 (4) | |
| C5 | 0.1770 (3) | 0.93444 (10) | 0.27517 (7) | 0.0336 (3) | |
| C6 | 0.3910 (3) | 0.99566 (10) | 0.30193 (7) | 0.0356 (4) | |
| C7 | 0.5185 (3) | 0.98199 (12) | 0.37060 (8) | 0.0460 (4) | |
| C8 | 0.4363 (4) | 0.90765 (14) | 0.41232 (9) | 0.0597 (5) | |
| H8 | 0.5227 | 0.8980 | 0.4571 | 0.072* | |
| C9 | 0.2361 (4) | 0.85156 (13) | 0.38776 (9) | 0.0553 (5) | |
| H9 | 0.1833 | 0.8043 | 0.4163 | 0.066* | |
| C10 | 0.7237 (4) | 1.04302 (14) | 0.39446 (10) | 0.0593 (5) | |
| H10 | 0.8122 | 1.0362 | 0.4393 | 0.071* | |
| C11 | 0.7935 (4) | 1.11242 (14) | 0.35196 (11) | 0.0598 (5) | |
| H11 | 0.9289 | 1.1536 | 0.3673 | 0.072* | |
| C12 | 0.6584 (4) | 1.12040 (12) | 0.28535 (10) | 0.0494 (4) | |
| H12 | 0.7079 | 1.1679 | 0.2567 | 0.059* | |
| C13 | −0.1736 (3) | 0.99054 (11) | 0.08028 (7) | 0.0387 (4) | |
| H13A | −0.2437 | 0.9841 | 0.0313 | 0.046* | |
| H13B | 0.0264 | 0.9875 | 0.0811 | 0.046* | |
| C14 | −0.2546 (3) | 1.08165 (11) | 0.10638 (8) | 0.0402 (4) | |
| H14A | −0.1674 | 1.0912 | 0.1535 | 0.048* | |
| H14B | −0.1856 | 1.1273 | 0.0752 | 0.048* | |
| C15 | −0.4906 (3) | 0.85897 (10) | 0.08751 (8) | 0.0392 (4) | |
| H15A | −0.6007 | 0.8955 | 0.0538 | 0.047* | |
| H15B | −0.6107 | 0.8389 | 0.1236 | 0.047* | |
| C16 | −0.3880 (4) | 0.77747 (11) | 0.04926 (8) | 0.0465 (4) | |
| H16A | −0.3010 | 0.7366 | 0.0840 | 0.056* | |
| H16B | −0.5452 | 0.7465 | 0.0262 | 0.056* | |
| N1 | 0.4640 (3) | 1.06489 (9) | 0.25999 (7) | 0.0415 (3) | |
| N2 | 0.0550 (2) | 0.94980 (8) | 0.20978 (6) | 0.0333 (3) | |
| N3 | −0.2733 (3) | 0.91507 (8) | 0.12111 (6) | 0.0374 (3) | |
| O1 | −0.5458 (2) | 1.09241 (8) | 0.10935 (6) | 0.0499 (3) | |
| H4 | −0.5826 | 1.0760 | 0.1499 | 0.075* | |
| O2 | −0.1971 (3) | 0.79774 (9) | −0.00230 (6) | 0.0586 (4) | |
| H5 | −0.2838 | 0.8313 | −0.0377 | 0.088* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0325 (8) | 0.0333 (8) | 0.0345 (7) | 0.0036 (6) | 0.0044 (6) | −0.0001 (6) |
| C2 | 0.0433 (9) | 0.0355 (8) | 0.0436 (8) | −0.0043 (7) | 0.0027 (7) | 0.0017 (7) |
| C3 | 0.0524 (10) | 0.0343 (9) | 0.0457 (9) | 0.0012 (7) | 0.0090 (8) | 0.0101 (7) |
| C4 | 0.0435 (9) | 0.0375 (8) | 0.0366 (8) | 0.0056 (7) | 0.0032 (7) | 0.0059 (6) |
| C5 | 0.0338 (8) | 0.0350 (8) | 0.0322 (7) | 0.0063 (6) | 0.0043 (6) | 0.0014 (6) |
| C6 | 0.0331 (9) | 0.0370 (8) | 0.0369 (8) | 0.0080 (6) | 0.0041 (6) | −0.0032 (6) |
| C7 | 0.0436 (10) | 0.0529 (10) | 0.0407 (8) | 0.0079 (8) | −0.0035 (7) | −0.0069 (7) |
| C8 | 0.0682 (13) | 0.0704 (13) | 0.0385 (9) | 0.0051 (10) | −0.0131 (8) | 0.0081 (8) |
| C9 | 0.0676 (13) | 0.0566 (11) | 0.0411 (9) | 0.0044 (9) | −0.0018 (8) | 0.0161 (8) |
| C10 | 0.0505 (11) | 0.0736 (14) | 0.0522 (10) | 0.0062 (10) | −0.0103 (8) | −0.0156 (9) |
| C11 | 0.0466 (11) | 0.0627 (12) | 0.0694 (12) | −0.0077 (9) | −0.0009 (9) | −0.0228 (10) |
| C12 | 0.0458 (10) | 0.0443 (10) | 0.0589 (10) | −0.0045 (8) | 0.0096 (8) | −0.0127 (8) |
| C13 | 0.0360 (9) | 0.0494 (9) | 0.0306 (7) | −0.0033 (7) | 0.0005 (6) | 0.0062 (6) |
| C14 | 0.0358 (9) | 0.0421 (9) | 0.0423 (8) | −0.0042 (7) | −0.0003 (7) | 0.0088 (6) |
| C15 | 0.0342 (9) | 0.0430 (9) | 0.0398 (8) | 0.0002 (7) | −0.0022 (6) | 0.0012 (6) |
| C16 | 0.0522 (11) | 0.0417 (9) | 0.0448 (9) | 0.0025 (7) | −0.0047 (8) | −0.0014 (7) |
| N1 | 0.0383 (8) | 0.0410 (7) | 0.0455 (7) | −0.0010 (6) | 0.0062 (6) | −0.0048 (6) |
| N2 | 0.0330 (7) | 0.0344 (7) | 0.0327 (6) | 0.0026 (5) | 0.0039 (5) | 0.0027 (5) |
| N3 | 0.0404 (7) | 0.0374 (7) | 0.0337 (6) | −0.0034 (6) | −0.0025 (5) | 0.0031 (5) |
| O1 | 0.0394 (7) | 0.0602 (8) | 0.0502 (7) | 0.0085 (5) | 0.0040 (5) | 0.0163 (5) |
| O2 | 0.0552 (8) | 0.0697 (9) | 0.0514 (7) | 0.0186 (6) | 0.0069 (6) | −0.0034 (6) |
Geometric parameters (Å, °)
| C1—N2 | 1.3319 (19) | C11—C12 | 1.386 (3) |
| C1—N3 | 1.3603 (18) | C11—H11 | 0.9300 |
| C1—C2 | 1.427 (2) | C12—N1 | 1.320 (2) |
| C2—C3 | 1.351 (2) | C12—H12 | 0.9300 |
| C2—H2 | 0.9300 | C13—N3 | 1.4590 (18) |
| C3—C4 | 1.406 (2) | C13—C14 | 1.501 (2) |
| C3—H3 | 0.9300 | C13—H13A | 0.9700 |
| C4—C5 | 1.410 (2) | C13—H13B | 0.9700 |
| C4—C9 | 1.425 (2) | C14—O1 | 1.4255 (19) |
| C5—N2 | 1.3539 (18) | C14—H14A | 0.9700 |
| C5—C6 | 1.447 (2) | C14—H14B | 0.9700 |
| C6—N1 | 1.3573 (19) | C15—N3 | 1.4574 (19) |
| C6—C7 | 1.415 (2) | C15—C16 | 1.509 (2) |
| C7—C10 | 1.400 (3) | C15—H15A | 0.9700 |
| C7—C8 | 1.427 (3) | C15—H15B | 0.9700 |
| C8—C9 | 1.340 (3) | C16—O2 | 1.415 (2) |
| C8—H8 | 0.9300 | C16—H16A | 0.9700 |
| C9—H9 | 0.9300 | C16—H16B | 0.9700 |
| C10—C11 | 1.361 (3) | O1—H4 | 0.8330 |
| C10—H10 | 0.9300 | O2—H5 | 0.9147 |
| N2—C1—N3 | 116.99 (13) | N1—C12—H12 | 117.9 |
| N2—C1—C2 | 121.66 (13) | C11—C12—H12 | 117.9 |
| N3—C1—C2 | 121.35 (14) | N3—C13—C14 | 114.71 (12) |
| C3—C2—C1 | 119.07 (14) | N3—C13—H13A | 108.6 |
| C3—C2—H2 | 120.5 | C14—C13—H13A | 108.6 |
| C1—C2—H2 | 120.5 | N3—C13—H13B | 108.6 |
| C2—C3—C4 | 120.81 (14) | C14—C13—H13B | 108.6 |
| C2—C3—H3 | 119.6 | H13A—C13—H13B | 107.6 |
| C4—C3—H3 | 119.6 | O1—C14—C13 | 113.19 (13) |
| C3—C4—C5 | 116.60 (14) | O1—C14—H14A | 108.9 |
| C3—C4—C9 | 123.31 (15) | C13—C14—H14A | 108.9 |
| C5—C4—C9 | 120.08 (15) | O1—C14—H14B | 108.9 |
| N2—C5—C4 | 123.15 (14) | C13—C14—H14B | 108.9 |
| N2—C5—C6 | 118.39 (13) | H14A—C14—H14B | 107.8 |
| C4—C5—C6 | 118.45 (13) | N3—C15—C16 | 114.57 (13) |
| N1—C6—C7 | 121.82 (14) | N3—C15—H15A | 108.6 |
| N1—C6—C5 | 118.68 (13) | C16—C15—H15A | 108.6 |
| C7—C6—C5 | 119.50 (14) | N3—C15—H15B | 108.6 |
| C10—C7—C6 | 117.59 (16) | C16—C15—H15B | 108.6 |
| C10—C7—C8 | 122.76 (16) | H15A—C15—H15B | 107.6 |
| C6—C7—C8 | 119.65 (15) | O2—C16—C15 | 113.97 (13) |
| C9—C8—C7 | 120.76 (15) | O2—C16—H16A | 108.8 |
| C9—C8—H8 | 119.6 | C15—C16—H16A | 108.8 |
| C7—C8—H8 | 119.6 | O2—C16—H16B | 108.8 |
| C8—C9—C4 | 121.54 (16) | C15—C16—H16B | 108.8 |
| C8—C9—H9 | 119.2 | H16A—C16—H16B | 107.7 |
| C4—C9—H9 | 119.2 | C12—N1—C6 | 117.92 (14) |
| C11—C10—C7 | 119.93 (17) | C1—N2—C5 | 118.67 (12) |
| C11—C10—H10 | 120.0 | C1—N3—C15 | 122.52 (12) |
| C7—C10—H10 | 120.0 | C1—N3—C13 | 119.64 (12) |
| C10—C11—C12 | 118.52 (17) | C15—N3—C13 | 117.64 (11) |
| C10—C11—H11 | 120.7 | C14—O1—H4 | 105.8 |
| C12—C11—H11 | 120.7 | C16—O2—H5 | 109.1 |
| N1—C12—C11 | 124.22 (18) | ||
| N2—C1—C2—C3 | 2.5 (2) | C6—C7—C10—C11 | 0.1 (3) |
| N3—C1—C2—C3 | −177.39 (14) | C8—C7—C10—C11 | 179.74 (17) |
| C1—C2—C3—C4 | −1.0 (2) | C7—C10—C11—C12 | −0.3 (3) |
| C2—C3—C4—C5 | −0.4 (2) | C10—C11—C12—N1 | 0.2 (3) |
| C2—C3—C4—C9 | 178.88 (15) | N3—C13—C14—O1 | −56.55 (17) |
| C3—C4—C5—N2 | 0.5 (2) | N3—C15—C16—O2 | −54.91 (18) |
| C9—C4—C5—N2 | −178.84 (14) | C11—C12—N1—C6 | 0.2 (2) |
| C3—C4—C5—C6 | 179.25 (13) | C7—C6—N1—C12 | −0.4 (2) |
| C9—C4—C5—C6 | −0.1 (2) | C5—C6—N1—C12 | 179.63 (13) |
| N2—C5—C6—N1 | −1.15 (19) | N3—C1—N2—C5 | 177.46 (12) |
| C4—C5—C6—N1 | −179.99 (13) | C2—C1—N2—C5 | −2.4 (2) |
| N2—C5—C6—C7 | 178.92 (13) | C4—C5—N2—C1 | 1.0 (2) |
| C4—C5—C6—C7 | 0.1 (2) | C6—C5—N2—C1 | −177.83 (12) |
| N1—C6—C7—C10 | 0.3 (2) | N2—C1—N3—C15 | 177.43 (12) |
| C5—C6—C7—C10 | −179.75 (14) | C2—C1—N3—C15 | −2.7 (2) |
| N1—C6—C7—C8 | −179.37 (14) | N2—C1—N3—C13 | 2.72 (19) |
| C5—C6—C7—C8 | 0.5 (2) | C2—C1—N3—C13 | −177.39 (13) |
| C10—C7—C8—C9 | 179.05 (18) | C16—C15—N3—C1 | −81.85 (17) |
| C6—C7—C8—C9 | −1.3 (3) | C16—C15—N3—C13 | 92.96 (16) |
| C7—C8—C9—C4 | 1.3 (3) | C14—C13—N3—C1 | −75.61 (17) |
| C3—C4—C9—C8 | −179.92 (17) | C14—C13—N3—C15 | 109.43 (15) |
| C5—C4—C9—C8 | −0.7 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O2—H5···O1i | 0.91 | 1.91 | 2.8254 (17) | 177 |
| O1—H4···N1ii | 0.83 | 2.08 | 2.8676 (18) | 158 |
Symmetry codes: (i) −x−1, −y+2, −z; (ii) x−1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH2772).
References
- Bruker (1997). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Li, H., Hu, T. Q. & Zhang, S. G. (2008). Acta Cryst. E64, m771. [DOI] [PMC free article] [PubMed]
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Zhang, S. G., Hu, T. Q. & Li, H. (2008). Acta Cryst. E64, m769. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809004929/lh2772sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809004929/lh2772Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


