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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Mar 6;65(Pt 4):m355–m356. doi: 10.1107/S1600536809006059

Poly[(μ2-2-hydr­oxy-2-methyl­propionato-κ3 O 1,O 2:O 1′)(μ2-2-hydr­oxy-2-methyl­propionato-κ2 O 1O 1′)dioxido­uranium(VI)]

Takashi Yoshimura a,*, Hidetoshi Kikunaga a, Atsushi Shinohara a
PMCID: PMC2968812  PMID: 21582314

Abstract

In the title compound, [UO2(C4H7O3)2]n, the dioxouranium(VI) units are linked by 2-hydr­oxy-2-methyl­propionate ligands into a honeycomb structure. The U atom is seven-coordinate in a penta­gonal-bipyramidal geometry. The uncoordinated hydr­oxy groups of the 2-hydr­oxy-2-methyl­propionate ions inter­act with the O atom of the uranyl and with the coordinated hydr­oxy group of an adjacent 2-hydr­oxy-2-methyl­propionate ion through O—H⋯O hydrogen bonds.

Related literature

For related structures, see: Back et al. (2007); Bombieri et al. (1973, 1974); Jiang et al. (2002); Thuéry (2006, 2007a ,b ,c , 2008); Xie et al. (2003); Yokoyama et al. (1990).graphic file with name e-65-0m355-scheme1.jpg

Experimental

Crystal data

  • [U(C4H7O3)2O2]

  • M r = 476.22

  • Monoclinic, Inline graphic

  • a = 9.009 (2) Å

  • b = 8.237 (2) Å

  • c = 17.552 (6) Å

  • β = 98.246 (9)°

  • V = 1289.0 (6) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 12.62 mm−1

  • T = 200 K

  • 0.20 × 0.11 × 0.03 mm

Data collection

  • Rigaku R-AXIS RAPID Imaging Plate diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995) T min = 0.233, T max = 0.685

  • 11887 measured reflections

  • 2949 independent reflections

  • 2547 reflections with I > 2σ(I)

  • R int = 0.050

Refinement

  • R[F 2 > 2σ(F 2)] = 0.029

  • wR(F 2) = 0.100

  • S = 0.86

  • 2949 reflections

  • 160 parameters

  • H-atom parameters constrained

  • Δρmax = 0.99 e Å−3

  • Δρmin = −2.15 e Å−3

Data collection: PROCESS-AUTO (Rigaku, 1998); cell refinement: PROCESS-AUTO; data reduction: TEXSAN (Rigaku/MSC, 2004); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: TEXSAN.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809006059/ng2546sup1.cif

e-65-0m355-sup1.cif (17.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809006059/ng2546Isup2.hkl

e-65-0m355-Isup2.hkl (144.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected bond lengths (Å).

U1—O1 1.783 (5)
U1—O2 1.762 (6)
U1—O3 2.444 (5)
U1—O4 2.407 (5)
U1—O5i 2.355 (4)
U1—O7 2.346 (5)
U1—O7 2.336 (5)

Symmetry code: (i) Inline graphic.

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O3—H13⋯O6 0.82 1.93 2.597 (6) 138
O6—H14⋯O1ii 0.82 2.00 2.777 (6) 158

Symmetry code: (ii) Inline graphic.

Acknowledgments

The present study is the result of the efficient separation and analysis of nuclear fission products for reprocessing systems entrusted to Osaka University by the Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT).

supplementary crystallographic information

Comment

Structural chemistry of uranyl(VI) complexes with hydroxycarboxylate or alkoxycarboxylate has been extensively studied (Back et al. (2007); Bombieri et al.(1973, 1974); Jiang et al. (2002); Thuéry (2006, 2007a,b,c, 2008); Xie et al. (2003); Yokoyama et al.(1990)). The crystals of the title compound (I) suitable for single-crystal X-ray analysis were obtained by the reaction of bis(acetato)dioxouranium dihydrate with an excess amount of 2-hydroxy-2-methylpropionic acid in water. Herein, we report on the crystal structure of I. Uranium(VI) atom is seven-coordinate in a pentagonal-bipyramidal structure. The two oxygen atoms are located at the axial positions with nearly linear O(1)—U(1)—O(2) angle (178.3 (2)°). The equatorial positions are coordinated by five oxygen atoms of 2-hydroxy-2-methylpropionate (HIB) ligands. Two kinds of HIB ligands exist in the asymmetric unit. One of the HIB ligands links two uranium atoms by the carboxyl group. The other chelates one uranium atom through the hydroxy and carboxyl groups, moreover the carboxyl group bridges the neighboring uranium atom. As a result, a two-dimensional honeycomb structure is formed. The IR spectrum of I shows stretching bands of the carboxyl group of HIB at 1614 and 1561 cm-1.

Experimental

2-Hydroxy-2-methylpropionic acid (150 mg, 1.45 mmol) was added to a solution of bis(acetato)dioxouranium dihydrate (50 mg, 0.12 mmol) in 3 ml of water. The resulting yellow solution was left for several days at room temperature to give yellow crystals, which were filtered off, washed with a small amount of water, and then dried in air.

Refinement

H atoms bonded to C and O atoms were placed at calculated positions [C—H = 0.96 and O—H = 0.82] and refined as riding with Uiso(H) = 1.0 Ueq(C,O). The deepest hole is 0.68 Å from atom U(1).

Figures

Fig. 1.

Fig. 1.

The assymmetric unit of I, with the atom-numbering scheme and displacement ellipsoids drawn at 50% probability level. Hydrogen atoms are omitted for clarity.

Fig. 2.

Fig. 2.

Fragment of the polymeric structure. Hydrogen atoms are omitted for clarity.

Fig. 3.

Fig. 3.

View of the polymeric structure. Hydrogen atoms are omitted for clarity.

Crystal data

[U(C4H7O3)2O2] F(000) = 872.00
Mr = 476.22 Dx = 2.454 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.7107 Å
Hall symbol: -P 2yn Cell parameters from 8716 reflections
a = 9.009 (2) Å θ = 3.0–27.5°
b = 8.237 (2) Å µ = 12.62 mm1
c = 17.552 (6) Å T = 200 K
β = 98.246 (9)° Platelet, yellow
V = 1289.0 (6) Å3 0.20 × 0.11 × 0.03 mm
Z = 4

Data collection

Rigaku R-AXIS RAPID Imaging Plate diffractometer 2949 independent reflections
Radiation source: fine-focus sealed tube 2547 reflections with I > 2σ(I)
graphite Rint = 0.050
Detector resolution: 10.00 pixels mm-1 θmax = 27.5°, θmin = 3.0°
ω scans h = 12→11
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) k = −9→10
Tmin = 0.233, Tmax = 0.685 l = −22→22
11887 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.029 H-atom parameters constrained
wR(F2) = 0.100 w = 1/[σ2(Fo2) + (0.079P)2 + 5.354P] where P = (Fo2 + 2Fc2)/3
S = 0.86 (Δ/σ)max = 0.001
2949 reflections Δρmax = 0.99 e Å3
160 parameters Δρmin = −2.15 e Å3
Primary atom site location: structure-invariant direct methods

Special details

Geometry. All e.s.d's (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
U(1) 0.63772 (2) 0.19668 (3) 0.62425 (1) 0.0180 (1)
O(1) 0.7538 (6) 0.3101 (5) 0.5695 (3) 0.028 (1)
O(2) 0.5188 (6) 0.0891 (6) 0.6778 (3) 0.032 (1)
O(3) 0.4753 (5) 0.4342 (5) 0.6250 (3) 0.026 (1)
O(4) 0.6920 (5) 0.3869 (6) 0.7286 (3) 0.029 (1)
O(5) 0.6435 (5) 0.6018 (6) 0.7991 (3) 0.0252 (10)
O(6) 0.2338 (5) 0.4208 (5) 0.5248 (3) 0.0241 (10)
O(7) 0.7009 (6) −0.0415 (6) 0.5630 (3) 0.034 (1)
O(8) 0.4514 (6) 0.1975 (5) 0.5169 (3) 0.030 (1)
C(1) 0.6115 (7) 0.5015 (8) 0.7435 (3) 0.022 (1)
C(2) 0.4611 (7) 0.5295 (8) 0.6929 (4) 0.021 (1)
C(3) 0.3351 (8) 0.463 (1) 0.7324 (4) 0.036 (2)
C(4) 0.4392 (10) 0.7064 (7) 0.6704 (5) 0.030 (2)
C(5) 0.3241 (7) 0.1601 (8) 0.4820 (4) 0.020 (1)
C(6) 0.1889 (7) 0.2626 (8) 0.4949 (4) 0.021 (1)
C(7) 0.1191 (10) 0.1790 (9) 0.5588 (5) 0.039 (2)
C(8) 0.0781 (10) 0.280 (1) 0.4211 (5) 0.038 (2)
H(1) 0.3277 0.5253 0.7779 0.0356*
H(2) 0.2423 0.4698 0.6980 0.0356*
H(3) 0.3555 0.3516 0.7462 0.0356*
H(4) 0.4388 0.7711 0.7159 0.0297*
H(5) 0.3454 0.7192 0.6374 0.0297*
H(6) 0.5196 0.7409 0.6438 0.0297*
H(7) 0.0321 0.2384 0.5684 0.0386*
H(8) 0.1908 0.1757 0.6048 0.0386*
H(9) 0.0907 0.0703 0.5432 0.0386*
H(10) −0.0100 0.3359 0.4322 0.0383*
H(11) 0.0507 0.1746 0.4007 0.0383*
H(12) 0.1237 0.3413 0.3841 0.0383*
H(13) 0.4210 0.4724 0.5878 0.0255*
H(14) 0.2178 0.4883 0.4902 0.0241*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
U(1) 0.0192 (2) 0.0158 (2) 0.0185 (2) 0.00083 (8) 0.0005 (1) −0.00114 (8)
O(1) 0.022 (3) 0.030 (3) 0.032 (3) 0.007 (2) 0.004 (2) 0.007 (2)
O(2) 0.029 (3) 0.025 (2) 0.044 (3) 0.005 (2) 0.009 (2) 0.007 (2)
O(3) 0.034 (3) 0.022 (2) 0.017 (2) 0.008 (2) −0.008 (2) −0.005 (2)
O(4) 0.029 (3) 0.025 (2) 0.030 (2) 0.007 (2) −0.004 (2) −0.006 (2)
O(5) 0.028 (2) 0.027 (2) 0.020 (2) −0.008 (2) 0.001 (2) −0.010 (2)
O(6) 0.030 (2) 0.016 (2) 0.023 (2) 0.002 (2) −0.005 (2) −0.001 (2)
O(7) 0.032 (3) 0.027 (3) 0.038 (3) 0.009 (2) −0.008 (2) −0.018 (2)
O(8) 0.023 (3) 0.033 (3) 0.033 (3) 0.005 (2) −0.002 (2) −0.008 (2)
C(1) 0.023 (3) 0.024 (3) 0.017 (3) −0.007 (3) 0.000 (2) −0.001 (3)
C(2) 0.027 (3) 0.016 (3) 0.020 (3) 0.000 (3) 0.000 (2) −0.008 (2)
C(3) 0.032 (4) 0.042 (4) 0.035 (4) −0.012 (3) 0.009 (3) −0.013 (3)
C(4) 0.040 (4) 0.015 (3) 0.032 (4) 0.004 (3) −0.001 (3) −0.004 (3)
C(5) 0.022 (3) 0.019 (3) 0.020 (3) 0.009 (3) 0.001 (2) 0.002 (3)
C(6) 0.021 (3) 0.018 (3) 0.022 (3) 0.013 (3) −0.003 (2) 0.003 (3)
C(7) 0.035 (4) 0.036 (4) 0.048 (5) −0.015 (3) 0.017 (4) −0.005 (3)
C(8) 0.035 (4) 0.035 (4) 0.040 (4) 0.014 (3) −0.012 (4) −0.004 (4)

Geometric parameters (Å, °)

U(1)—O(1) 1.783 (5) C(2)—C(4) 1.514 (9)
U(1)—O(2) 1.762 (6) C(3)—H(1) 0.960
U(1)—O(3) 2.444 (5) C(3)—H(2) 0.960
U(1)—O(4) 2.407 (5) C(3)—H(3) 0.960
U(1)—O(5)i 2.355 (4) C(4)—H(4) 0.960
U(1)—O(7) 2.346 (5) C(4)—H(5) 0.960
U(1)—O(8) 2.336 (5) C(4)—H(6) 0.960
O(3)—C(2) 1.449 (8) C(5)—C(6) 1.525 (10)
O(3)—H(13) 0.820 C(6)—C(7) 1.53 (1)
O(4)—C(1) 1.241 (8) C(6)—C(8) 1.523 (10)
O(5)—C(1) 1.280 (8) C(7)—H(7) 0.960
O(6)—C(6) 1.441 (8) C(7)—H(8) 0.960
O(6)—H(14) 0.820 C(7)—H(9) 0.960
O(7)—C(5)ii 1.257 (8) C(8)—H(10) 0.960
O(8)—C(5) 1.259 (8) C(8)—H(11) 0.960
C(1)—C(2) 1.528 (8) C(8)—H(12) 0.960
C(2)—C(3) 1.51 (1)
O(1)—U(1)—O(2) 178.3 (2) C(1)—C(2)—C(4) 111.6 (6)
O(1)—U(1)—O(3) 88.9 (2) C(3)—C(2)—C(4) 112.9 (6)
O(1)—U(1)—O(4) 89.9 (2) C(2)—C(3)—H(1) 109.5
O(1)—U(1)—O(5)i 88.5 (2) C(2)—C(3)—H(2) 109.5
O(1)—U(1)—O(7) 89.5 (2) C(2)—C(3)—H(3) 109.5
O(1)—U(1)—O(8) 88.5 (2) H(1)—C(3)—H(2) 109.5
O(2)—U(1)—O(3) 89.4 (2) H(1)—C(3)—H(3) 109.5
O(2)—U(1)—O(4) 89.7 (2) H(2)—C(3)—H(3) 109.5
O(2)—U(1)—O(5)i 93.0 (2) C(2)—C(4)—H(4) 109.5
O(2)—U(1)—O(7) 91.7 (2) C(2)—C(4)—H(5) 109.5
O(2)—U(1)—O(8) 90.6 (2) C(2)—C(4)—H(6) 109.5
O(3)—U(1)—O(4) 62.1 (1) H(4)—C(4)—H(5) 109.5
O(3)—U(1)—O(5)i 135.7 (2) H(4)—C(4)—H(6) 109.5
O(3)—U(1)—O(7) 148.9 (2) H(5)—C(4)—H(6) 109.5
O(3)—U(1)—O(8) 68.9 (2) O(7)ii—C(5)—O(8) 124.4 (6)
O(4)—U(1)—O(5)i 73.7 (2) O(7)ii—C(5)—C(6) 116.7 (6)
O(4)—U(1)—O(7) 149.0 (2) O(8)—C(5)—C(6) 119.0 (6)
O(4)—U(1)—O(8) 131.0 (2) O(6)—C(6)—C(5) 111.4 (5)
O(5)i—U(1)—O(7) 75.3 (2) O(6)—C(6)—C(7) 105.3 (5)
O(5)i—U(1)—O(8) 155.1 (2) O(6)—C(6)—C(8) 109.8 (6)
O(7)—U(1)—O(8) 80.0 (2) C(5)—C(6)—C(7) 106.3 (6)
U(1)—O(3)—C(2) 124.2 (3) C(5)—C(6)—C(8) 111.5 (6)
U(1)—O(3)—H(13) 126.3 C(7)—C(6)—C(8) 112.2 (6)
C(2)—O(3)—H(13) 109.5 C(6)—C(7)—H(7) 109.5
U(1)—O(4)—C(1) 126.5 (4) C(6)—C(7)—H(8) 109.5
U(1)iii—O(5)—C(1) 136.7 (4) C(6)—C(7)—H(9) 109.5
C(6)—O(6)—H(14) 109.5 H(7)—C(7)—H(8) 109.5
U(1)—O(7)—C(5)ii 154.9 (4) H(7)—C(7)—H(9) 109.5
U(1)—O(8)—C(5) 153.0 (5) H(8)—C(7)—H(9) 109.5
O(4)—C(1)—O(5) 125.3 (6) C(6)—C(8)—H(10) 109.5
O(4)—C(1)—C(2) 119.3 (5) C(6)—C(8)—H(11) 109.5
O(5)—C(1)—C(2) 115.4 (6) C(6)—C(8)—H(12) 109.5
O(3)—C(2)—C(1) 102.7 (5) H(10)—C(8)—H(11) 109.5
O(3)—C(2)—C(3) 109.9 (5) H(10)—C(8)—H(12) 109.5
O(3)—C(2)—C(4) 109.3 (5) H(11)—C(8)—H(12) 109.5
C(1)—C(2)—C(3) 109.9 (5)

Symmetry codes: (i) −x+3/2, y−1/2, −z+3/2; (ii) −x+1, −y, −z+1; (iii) −x+3/2, y+1/2, −z+3/2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O(3)—H(13)···O(6) 0.820 1.927 2.597 (6) 138.188
O(6)—H(14)···O(1)iv 0.820 1.999 2.777 (6) 158.201

Symmetry codes: (iv) −x+1, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: NG2546).

References

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  4. Bombieri, G., Graziani, R. & Forsellini, E. (1973). Inorg. Nucl. Chem. Lett.9, 551–557.
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809006059/ng2546sup1.cif

e-65-0m355-sup1.cif (17.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809006059/ng2546Isup2.hkl

e-65-0m355-Isup2.hkl (144.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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