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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Mar 14;65(Pt 4):o747. doi: 10.1107/S1600536809008113

N,N′-Bis(4-bromo­benzyl­idene)-2,2-dimethyl­propane-1,3-diamine

Reza Kia a, Hoong-Kun Fun a,*, Hadi Kargar b
PMCID: PMC2968840  PMID: 21582479

Abstract

The mol­ecule of the title compound, C19H20Br2N2, is a potential bidentate Schiff base ligand. The two benzene rings are inclined at a dihedral angle of 30.85 (8)°. An inter­esting feature of the crystal structure is a weak inter­molecular Br⋯Br [3.4752 (4) Å] inter­action which is shorter than the sum of the van der Waals radii of the Br atoms and links neighbouring mol­ecules into chains along the c axis. The crystal structure is further stabilized by inter­molecular C—H⋯π inter­actions.

Related literature

For details of hydrogen-bond motifs, see: Bernstein et al. (1995). For related structure see, for example: Li et al. (2005); Bomfim et al. (2005); Glidewell et al. (2005, 2006); Sun et al. (2004); Fun et al. (2008). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).graphic file with name e-65-0o747-scheme1.jpg

Experimental

Crystal data

  • C19H20Br2N2

  • M r = 436.19

  • Orthorhombic, Inline graphic

  • a = 5.6687 (1) Å

  • b = 7.7919 (2) Å

  • c = 41.5932 (9) Å

  • V = 1837.17 (7) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 4.41 mm−1

  • T = 100 K

  • 0.45 × 0.44 × 0.12 mm

Data collection

  • Bruker SMART APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2005) T min = 0.229, T max = 0.586

  • 38732 measured reflections

  • 9454 independent reflections

  • 7585 reflections with I > 2σ(I)

  • R int = 0.049

Refinement

  • R[F 2 > 2σ(F 2)] = 0.037

  • wR(F 2) = 0.079

  • S = 1.03

  • 9454 reflections

  • 208 parameters

  • H-atom parameters constrained

  • Δρmax = 1.04 e Å−3

  • Δρmin = −0.61 e Å−3

  • Absolute structure: Flack (1983), 3971 Friedel pairs

  • Flack parameter: 0.019 (6)

Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809008113/at2737sup1.cif

e-65-0o747-sup1.cif (19.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809008113/at2737Isup2.hkl

e-65-0o747-Isup2.hkl (462.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C4—H4ACg1i 0.95 2.85 3.5630 (18) 132
C13—H13ACg2ii 0.95 2.74 3.4648 (18) 134

Symmetry codes: (i) Inline graphic; (ii) Inline graphic. Cg1 and Cg2 are the centroids of the C1–C6 and C9–C17 benzene rings, respectively.

Acknowledgments

HKF and RK thank the Malaysian Government and Universiti Sains Malaysia for the Science Fund grant No. 305/PFIZIK/613312. RK thanks Universiti Sains Malaysia for a post-doctoral research fellowship. HK thanks PNU for financial support. HKF also thanks Universiti Sains Malaysia for the Research University Golden Goose grant No. 1001/PFIZIK/811012.

supplementary crystallographic information

Comment

Schiff bases are one of most prevalent mixed-donor ligands in the field of coordination chemistry. They play an important role in the development of coordination chemistry related to catalysis and enzymatic reactions, magnetism, and supramolecular architectures. Structures of Schiff bases derived from substituted benzaldehydes and closely related to the title compound have been reported previously (Li et al., 2005; Bomfim et al., 2005; Glidewell et al., 2005, 2006; Sun et al., 2004; Fun et al., 2008).

In the title compound, Fig. 1, intramolecular C—H···N hydrogen bonds forms five-membered rings, producing S(5) ring motifs (Bernstein et al., 1995). The two benzene rings make a dihedral angle of 30.85 (8)°. The crystal structure is further stabilized by weak intermolecular C—H···π interactions [Cg1 and Cg2 are the centroids of the C1–C6 and C12–C17 benzene rings] (Table 1). The interesting feature of the crystal structure is weak intermolecular Br···Br [3.4752 (4) Å; symmetry code: 5/2 - x, 1 - y, -1/2 + z] interaction which is shorter than the sum of the van der Waals radius of Br atoms and link neighbouring molecules into chains along the c axis (Fig. 2).

Experimental

The synthetic method has been described earlier (Fun et al., 2008), except that 4-bromobenzaldehyde was used. Single crystals suitable for X-ray diffraction were obtained by evaporation of an ethanol solution at room temperature.

Refinement

All of the hydrogen atoms were positioned geometrically and refined using a riding model approximation with C—H = 0.95–0.99 Å and Uiso(H) = 1.2 or 1.5Ueq(C). In the presence of the sufficient anomalous scattering, the absoulte configuration was determined (3971 Friedel pairs).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with atom labels and 50% probability ellipsoids for non-H atoms. Intramolecular hydrogen bond is shown as dashed line.

Fig. 2.

Fig. 2.

The crystal packing of the title compound, viewed down the a- axis showing chains along the c-axis by Br···Br interactions.

Crystal data

C19H20Br2N2 F(000) = 872
Mr = 436.19 Dx = 1.577 Mg m3
Orthorhombic, P212121 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2ab Cell parameters from 9987 reflections
a = 5.6687 (1) Å θ = 2.7–35.5°
b = 7.7919 (2) Å µ = 4.41 mm1
c = 41.5932 (9) Å T = 100 K
V = 1837.17 (7) Å3 Block, colourless
Z = 4 0.45 × 0.44 × 0.12 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer 9454 independent reflections
Radiation source: fine-focus sealed tube 7585 reflections with I > 2σ(I)
graphite Rint = 0.049
φ and ω scans θmax = 37.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2005) h = −9→9
Tmin = 0.229, Tmax = 0.586 k = −10→13
38732 measured reflections l = −71→55

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037 H-atom parameters constrained
wR(F2) = 0.079 w = 1/[σ2(Fo2) + (0.0316P)2 + 0.2032P] where P = (Fo2 + 2Fc2)/3
S = 1.03 (Δ/σ)max = 0.011
9454 reflections Δρmax = 1.04 e Å3
208 parameters Δρmin = −0.60 e Å3
0 restraints Absolute structure: Flack (1983), 3971 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: 0.019 (6)

Special details

Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Br1 1.59060 (4) 0.70918 (3) 0.679860 (5) 0.03041 (5)
Br2 1.02132 (3) 0.35735 (2) 1.095005 (4) 0.02216 (4)
N1 0.9734 (3) 0.7039 (2) 0.82239 (4) 0.0214 (3)
N2 0.8180 (3) 0.6175 (2) 0.93830 (4) 0.0198 (3)
C1 1.0509 (3) 0.5599 (2) 0.74067 (5) 0.0203 (3)
H1A 0.9062 0.4991 0.7388 0.024*
C2 1.1894 (4) 0.5835 (3) 0.71353 (5) 0.0219 (3)
H2A 1.1410 0.5403 0.6932 0.026*
C3 1.4013 (3) 0.6720 (2) 0.71684 (4) 0.0212 (3)
C4 1.4767 (3) 0.7348 (2) 0.74652 (4) 0.0197 (3)
H4A 1.6230 0.7935 0.7484 0.024*
C5 1.3353 (3) 0.7104 (3) 0.77327 (4) 0.0184 (3)
H5A 1.3848 0.7528 0.7936 0.022*
C6 1.1191 (3) 0.6235 (2) 0.77059 (4) 0.0180 (3)
C7 0.9574 (3) 0.6067 (2) 0.79820 (5) 0.0198 (3)
H7A 0.8386 0.5208 0.7978 0.024*
C8 0.8001 (3) 0.6814 (3) 0.84805 (4) 0.0209 (3)
H8A 0.6996 0.5808 0.8432 0.025*
H8B 0.6972 0.7839 0.8491 0.025*
C9 0.9225 (3) 0.6548 (2) 0.88094 (4) 0.0179 (3)
C10 0.7242 (3) 0.6457 (2) 0.90606 (4) 0.0188 (3)
H10A 0.6333 0.7542 0.9057 0.023*
H10B 0.6152 0.5510 0.9005 0.023*
C11 0.6955 (3) 0.5293 (2) 0.95790 (4) 0.0178 (3)
H11A 0.5486 0.4841 0.9509 0.021*
C12 0.7732 (3) 0.4951 (2) 0.99097 (4) 0.0165 (3)
C13 0.6324 (3) 0.3938 (2) 1.01110 (5) 0.0184 (3)
H13A 0.4861 0.3514 1.0033 0.022*
C14 0.7025 (3) 0.3543 (3) 1.04224 (4) 0.0196 (3)
H14A 0.6050 0.2867 1.0558 0.024*
C15 0.9177 (3) 0.4158 (2) 1.05301 (4) 0.0184 (3)
C16 1.0606 (3) 0.5189 (2) 1.03375 (4) 0.0192 (3)
H16A 1.2063 0.5616 1.0417 0.023*
C17 0.9877 (3) 0.5583 (2) 1.00290 (4) 0.0193 (3)
H17A 1.0838 0.6289 0.9897 0.023*
C18 1.0856 (3) 0.8053 (3) 0.88844 (5) 0.0241 (4)
H18A 1.1615 0.7866 0.9093 0.036*
H18B 0.9935 0.9117 0.8891 0.036*
H18C 1.2065 0.8142 0.8717 0.036*
C19 1.0619 (4) 0.4868 (3) 0.88061 (5) 0.0244 (4)
H19A 1.1393 0.4706 0.9015 0.037*
H19B 1.1816 0.4913 0.8636 0.037*
H19C 0.9544 0.3908 0.8765 0.037*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.02919 (10) 0.04538 (12) 0.01667 (8) 0.00266 (9) 0.00467 (7) 0.00429 (9)
Br2 0.02804 (9) 0.02117 (7) 0.01728 (8) −0.00042 (7) −0.00430 (7) 0.00085 (7)
N1 0.0223 (6) 0.0248 (7) 0.0169 (6) −0.0017 (6) 0.0014 (6) 0.0021 (6)
N2 0.0204 (7) 0.0234 (8) 0.0155 (7) 0.0001 (6) 0.0011 (5) 0.0003 (6)
C1 0.0215 (8) 0.0207 (8) 0.0189 (8) 0.0001 (6) −0.0015 (6) −0.0033 (6)
C2 0.0239 (8) 0.0251 (8) 0.0168 (8) 0.0028 (7) −0.0041 (7) −0.0041 (7)
C3 0.0228 (7) 0.0233 (9) 0.0176 (8) 0.0044 (6) 0.0029 (6) 0.0023 (6)
C4 0.0183 (7) 0.0218 (7) 0.0190 (7) −0.0006 (6) 0.0004 (6) 0.0019 (6)
C5 0.0194 (7) 0.0208 (8) 0.0150 (7) −0.0003 (7) −0.0011 (6) −0.0011 (7)
C6 0.0209 (7) 0.0170 (8) 0.0161 (7) 0.0012 (6) 0.0000 (6) 0.0006 (6)
C7 0.0178 (7) 0.0216 (8) 0.0199 (8) −0.0008 (6) −0.0005 (6) 0.0034 (6)
C8 0.0181 (7) 0.0277 (10) 0.0168 (8) −0.0001 (6) 0.0012 (6) 0.0024 (7)
C9 0.0160 (7) 0.0201 (7) 0.0175 (7) 0.0003 (6) 0.0006 (5) 0.0009 (6)
C10 0.0186 (7) 0.0221 (7) 0.0157 (7) −0.0007 (6) −0.0008 (6) 0.0019 (8)
C11 0.0191 (7) 0.0186 (8) 0.0157 (7) −0.0003 (6) 0.0002 (6) −0.0017 (6)
C12 0.0181 (7) 0.0161 (7) 0.0152 (7) 0.0006 (6) 0.0006 (6) −0.0013 (6)
C13 0.0166 (7) 0.0197 (8) 0.0189 (8) −0.0009 (6) 0.0002 (6) −0.0003 (6)
C14 0.0206 (7) 0.0205 (7) 0.0178 (8) −0.0013 (7) 0.0020 (6) 0.0015 (7)
C15 0.0226 (8) 0.0186 (7) 0.0141 (7) 0.0027 (6) −0.0013 (6) −0.0020 (6)
C16 0.0176 (8) 0.0191 (7) 0.0208 (8) −0.0016 (6) 0.0004 (6) −0.0026 (6)
C17 0.0206 (7) 0.0192 (7) 0.0180 (7) −0.0022 (7) 0.0004 (7) −0.0009 (6)
C18 0.0212 (8) 0.0259 (9) 0.0251 (9) −0.0045 (7) 0.0019 (7) −0.0011 (8)
C19 0.0246 (9) 0.0235 (8) 0.0250 (9) 0.0057 (7) 0.0037 (7) 0.0021 (7)

Geometric parameters (Å, °)

Br1—C3 1.8978 (19) C9—C19 1.529 (3)
Br2—C15 1.8983 (18) C9—C10 1.536 (2)
N1—C7 1.263 (2) C10—H10A 0.9900
N1—C8 1.462 (2) C10—H10B 0.9900
N2—C11 1.272 (2) C11—C12 1.469 (3)
N2—C10 1.459 (2) C11—H11A 0.9500
C1—C2 1.387 (3) C12—C13 1.400 (3)
C1—C6 1.394 (3) C12—C17 1.402 (3)
C1—H1A 0.9500 C13—C14 1.389 (3)
C2—C3 1.392 (3) C13—H13A 0.9500
C2—H2A 0.9500 C14—C15 1.385 (3)
C3—C4 1.395 (3) C14—H14A 0.9500
C4—C5 1.384 (2) C15—C16 1.394 (3)
C4—H4A 0.9500 C16—C17 1.383 (3)
C5—C6 1.404 (3) C16—H16A 0.9500
C5—H5A 0.9500 C17—H17A 0.9500
C6—C7 1.475 (3) C18—H18A 0.9800
C7—H7A 0.9500 C18—H18B 0.9800
C8—C9 1.548 (3) C18—H18C 0.9800
C8—H8A 0.9900 C19—H19A 0.9800
C8—H8B 0.9900 C19—H19B 0.9800
C9—C18 1.525 (3) C19—H19C 0.9800
C7—N1—C8 117.50 (17) C9—C10—H10A 109.3
C11—N2—C10 118.11 (16) N2—C10—H10B 109.3
C2—C1—C6 121.48 (17) C9—C10—H10B 109.3
C2—C1—H1A 119.3 H10A—C10—H10B 108.0
C6—C1—H1A 119.3 N2—C11—C12 122.30 (17)
C1—C2—C3 118.26 (18) N2—C11—H11A 118.9
C1—C2—H2A 120.9 C12—C11—H11A 118.9
C3—C2—H2A 120.9 C13—C12—C17 118.72 (17)
C2—C3—C4 121.73 (18) C13—C12—C11 119.43 (16)
C2—C3—Br1 118.89 (15) C17—C12—C11 121.84 (17)
C4—C3—Br1 119.37 (14) C14—C13—C12 121.29 (17)
C5—C4—C3 119.03 (17) C14—C13—H13A 119.4
C5—C4—H4A 120.5 C12—C13—H13A 119.4
C3—C4—H4A 120.5 C15—C14—C13 118.47 (17)
C4—C5—C6 120.53 (16) C15—C14—H14A 120.8
C4—C5—H5A 119.7 C13—C14—H14A 120.8
C6—C5—H5A 119.7 C14—C15—C16 121.70 (17)
C1—C6—C5 118.96 (16) C14—C15—Br2 119.15 (14)
C1—C6—C7 119.40 (17) C16—C15—Br2 119.15 (14)
C5—C6—C7 121.56 (16) C17—C16—C15 119.17 (17)
N1—C7—C6 121.50 (17) C17—C16—H16A 120.4
N1—C7—H7A 119.3 C15—C16—H16A 120.4
C6—C7—H7A 119.3 C16—C17—C12 120.63 (17)
N1—C8—C9 111.10 (15) C16—C17—H17A 119.7
N1—C8—H8A 109.4 C12—C17—H17A 119.7
C9—C8—H8A 109.4 C9—C18—H18A 109.5
N1—C8—H8B 109.4 C9—C18—H18B 109.5
C9—C8—H8B 109.4 H18A—C18—H18B 109.5
H8A—C8—H8B 108.0 C9—C18—H18C 109.5
C18—C9—C19 110.28 (15) H18A—C18—H18C 109.5
C18—C9—C10 109.88 (15) H18B—C18—H18C 109.5
C19—C9—C10 110.16 (15) C9—C19—H19A 109.5
C18—C9—C8 110.46 (16) C9—C19—H19B 109.5
C19—C9—C8 109.78 (16) H19A—C19—H19B 109.5
C10—C9—C8 106.20 (14) C9—C19—H19C 109.5
N2—C10—C9 111.43 (14) H19A—C19—H19C 109.5
N2—C10—H10A 109.3 H19B—C19—H19C 109.5
C6—C1—C2—C3 0.4 (3) C11—N2—C10—C9 −146.93 (17)
C1—C2—C3—C4 0.7 (3) C18—C9—C10—N2 −61.5 (2)
C1—C2—C3—Br1 −178.88 (14) C19—C9—C10—N2 60.2 (2)
C2—C3—C4—C5 −0.9 (3) C8—C9—C10—N2 178.99 (16)
Br1—C3—C4—C5 178.64 (14) C10—N2—C11—C12 −179.41 (16)
C3—C4—C5—C6 0.1 (3) N2—C11—C12—C13 −178.58 (17)
C2—C1—C6—C5 −1.2 (3) N2—C11—C12—C17 0.2 (3)
C2—C1—C6—C7 175.36 (17) C17—C12—C13—C14 −0.6 (3)
C4—C5—C6—C1 0.9 (3) C11—C12—C13—C14 178.16 (17)
C4—C5—C6—C7 −175.54 (17) C12—C13—C14—C15 −0.8 (3)
C8—N1—C7—C6 177.89 (16) C13—C14—C15—C16 1.7 (3)
C1—C6—C7—N1 −157.81 (18) C13—C14—C15—Br2 −178.06 (14)
C5—C6—C7—N1 18.7 (3) C14—C15—C16—C17 −1.2 (3)
C7—N1—C8—C9 126.29 (18) Br2—C15—C16—C17 178.54 (14)
N1—C8—C9—C18 57.0 (2) C15—C16—C17—C12 −0.2 (3)
N1—C8—C9—C19 −64.8 (2) C13—C12—C17—C16 1.1 (3)
N1—C8—C9—C10 176.10 (15) C11—C12—C17—C16 −177.63 (17)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C18—H18C···N1 0.98 2.59 2.929 (3) 101
C4—H4A···Cg1i 0.95 2.85 3.5630 (18) 132
C13—H13A···Cg2ii 0.95 2.74 3.4648 (18) 134

Symmetry codes: (i) x+7/2, −y+1/2, −z+1; (ii) −x−1, y+1/2, −z+5/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: AT2737).

References

  1. Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl.34, 1555– 1573.
  2. Bomfim, J. A. S., Wardell, J. L., Low, J. N., Skakle, J. M. S. & Glidewell, C. (2005). Acta Cryst. C61, o53–o56. [DOI] [PubMed]
  3. Bruker (2005). APEX2, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst.19, 105–107.
  5. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
  6. Fun, H.-K., Kargar, H. & Kia, R. (2008). Acta Cryst.E64, o1308. [DOI] [PMC free article] [PubMed]
  7. Glidewell, C., Low, J. N., Skakle, J. M. S. & Wardell, J. L. (2005). Acta Cryst. E61, o3551–o3553. [DOI] [PubMed]
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  10. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
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  12. Sun, Y.-X., You, Z.-L. & Zhu, H.-L. (2004). Acta Cryst. E60, o1707–o1708.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809008113/at2737sup1.cif

e-65-0o747-sup1.cif (19.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809008113/at2737Isup2.hkl

e-65-0o747-Isup2.hkl (462.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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