Abstract
Crystals of the title compound, C14H9BrI2N2O2·H2O, were obtained from a condensation reaction of 3-bromobenzohydrazide with 3,5-diiodosalicylaldehyde. The Schiff base molecule assumes an E configuration with respect to the C=N bond, and the dihedral angle between the two benzene rings is 6.9 (2)°. An intramolecular O—H⋯N hydrogen bond is observed in the Schiff base molecule and may contribute to its overall near planarity. In the crystal structure, molecules are linked through intermolecular O—H⋯O and N—H⋯O hydrogen bonds, forming layers parallel to the bc plane. Short intermolecular I⋯O contacts [2.930 (5) Å] are also found, linking the molecules into zigzag chains along b.
Related literature
For the biological activity of Schiff bases, see: Bedia et al. (2006 ▶); Richardson & Bernhardt (1999 ▶); Koh et al. (1998 ▶); Prasad et al. (2007 ▶). For metal complexes of Schiff bases, see: Adams et al. (2000 ▶); Ainscough et al. (1998 ▶); Roth et al. (2007 ▶). For related structures, see: Fun et al. (2008 ▶); Butcher et al. (2007 ▶); Zhi & Yang (2007 ▶); Ejsmont et al. (2008 ▶); Yathirajan et al. (2007 ▶); Narayana et al. (2007 ▶). For bond-length data, see: Allen et al. (1987 ▶). For short intermolecular I⋯O contacts, see, for example: Britton (2003 ▶).
Experimental
Crystal data
C14H9BrI2N2O2·H2O
M r = 588.96
Monoclinic,
a = 15.181 (3) Å
b = 7.611 (2) Å
c = 15.516 (3) Å
β = 110.628 (3)°
V = 1677.8 (6) Å3
Z = 4
Mo Kα radiation
μ = 6.14 mm−1
T = 298 K
0.23 × 0.20 × 0.20 mm
Data collection
Bruker SMART 1000 CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.261, T max = 0.293
13552 measured reflections
3656 independent reflections
2651 reflections with I > 2σ(I)
R int = 0.059
Refinement
R[F 2 > 2σ(F 2)] = 0.042
wR(F 2) = 0.090
S = 1.00
3656 reflections
209 parameters
4 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.63 e Å−3
Δρmin = −0.69 e Å−3
Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809010964/sj2600sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809010964/sj2600Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O3—H3A⋯O1i | 0.86 (4) | 2.50 (6) | 3.131 (6) | 132 (6) |
| N2—H2⋯O3ii | 0.89 (4) | 2.08 (6) | 2.934 (6) | 162 (7) |
| O1—H1⋯N1 | 0.82 | 1.87 | 2.579 (6) | 144 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
We are grateful for financial support of this work from the Natural Science Foundation of Hunan Province, People’s Republic of China (Project No. 07 J J6023).
supplementary crystallographic information
Comment
Schiff bases have been demonstrated to possess interesting biological activities (Bedia et al., 2006; Richardson & Bernhardt, 1999; Koh et al., 1998; Prasad et al., 2007). These compounds have been widely used as versatile ligands in coordination chemistry (Adams et al., 2000; Ainscough et al., 1998; Roth et al., 2007). Recently, the crystal structures of such compounds have been extensively reported (Fun et al., 2008; Butcher et al., 2007; Zhi & Yang, 2007). In this paper, the new title Schiff base, (I), Fig. 1, is reported.
The asymmetric unit of (I) contains a Schiff base molecule and a water molecule of crystallization. The Schiff base molecule assumes an E configuration with respect to the C═N bond. The dihedral angle between the two benzene rings is 6.9 (2)°, indicating that the molecule is essentially planar. An intramolecular O—H···N hydrogen bond is observed in the Schiff base molecule and may contribute to its overall planarity. All bond lengths in (I) are within normal ranges (Allen et al., 1987) and comparable to the corresponding values in other similar compounds (Ejsmont et al., 2008; Yathirajan et al., 2007; Narayana et al., 2007).
In the crystal structure, molecules are linked through intermolecular O–H···O and N–H···O (Table 1) hydrogen bonds, forming layers parallel to the bc plane (Fig. 2). Additional short intermolecular I1···O12i contacts, 2.930 (5)Å, i = 1-x, -1/2+y, 1/2+z, are also observed linking molecules into zig-zag chains along b. Similar short I···O contacts have been reported previously (Britton, 2003).
Experimental
3-Bromobenzohydrazide (1.0 mmol, 215.2 mg) and 3,5-diiodosalicylaldehyde (1.0 mmol, 374.9 mg) were stirred at room temperature for two hours. The filtrate was kept in air for a week to obtain yellow block-shaped crystals of (I).
Refinement
Atoms H2, H3A and H3B were located in a difference Fourier map and refined isotropically, with the N–H, O–H, and H···H distances restrained to 0.90 (1), 0.85 (1), and 1.37 (2) Å, respectively. Other H atoms were positioned geometrically and refined using a riding model with d(C–H) = 0.93 Å, d(O–H) = 0.82 Å and Uiso = 1.2Ueq(C) and 1.5Ueq(O).
Figures
Fig. 1.
The molecular structure of (I), with 30% probability displacement ellipsoids. The intramolecular hydrogen bond is shown as a dashed line.
Fig. 2.
Molecular packing of (I), viewed along the b axis. H atoms not involved in the interactions have been omitted for clarity. Intermolecular hydrogen bonds and short I···O contacts are shown as dashed lines.
Crystal data
| C14H9BrI2N2O2·H2O | F(000) = 1096 |
| Mr = 588.96 | Dx = 2.331 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 2004 reflections |
| a = 15.181 (3) Å | θ = 2.6–24.5° |
| b = 7.611 (2) Å | µ = 6.14 mm−1 |
| c = 15.516 (3) Å | T = 298 K |
| β = 110.628 (3)° | Block, yellow |
| V = 1677.8 (6) Å3 | 0.23 × 0.20 × 0.20 mm |
| Z = 4 |
Data collection
| Bruker SMART 1000 CCD area-detector diffractometer | 3656 independent reflections |
| Radiation source: fine-focus sealed tube | 2651 reflections with I > 2σ(I) |
| graphite | Rint = 0.059 |
| ω scans | θmax = 27.0°, θmin = 1.4° |
| Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −19→19 |
| Tmin = 0.261, Tmax = 0.293 | k = −9→9 |
| 13552 measured reflections | l = −19→19 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.090 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.00 | w = 1/[σ2(Fo2) + (0.0296P)2] where P = (Fo2 + 2Fc2)/3 |
| 3656 reflections | (Δ/σ)max = 0.001 |
| 209 parameters | Δρmax = 0.63 e Å−3 |
| 4 restraints | Δρmin = −0.69 e Å−3 |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| I1 | 0.32291 (3) | −0.01495 (5) | 0.20582 (3) | 0.04369 (14) | |
| I2 | 0.14532 (3) | −0.04420 (6) | 0.49489 (3) | 0.04849 (15) | |
| Br1 | 1.04870 (5) | 0.64844 (11) | 0.62538 (6) | 0.0699 (3) | |
| O1 | 0.4774 (3) | 0.1800 (5) | 0.3704 (2) | 0.0362 (9) | |
| H1 | 0.5212 | 0.2190 | 0.4140 | 0.054* | |
| O2 | 0.6948 (3) | 0.4091 (6) | 0.4847 (3) | 0.0465 (11) | |
| O3 | 0.4178 (4) | 0.0028 (7) | 0.7467 (3) | 0.0636 (14) | |
| N1 | 0.5549 (3) | 0.3106 (5) | 0.5331 (3) | 0.0303 (10) | |
| N2 | 0.6303 (3) | 0.3938 (6) | 0.5939 (3) | 0.0318 (10) | |
| C1 | 0.4070 (4) | 0.1717 (7) | 0.4882 (4) | 0.0301 (12) | |
| C2 | 0.4058 (4) | 0.1324 (6) | 0.3995 (3) | 0.0260 (11) | |
| C3 | 0.3290 (4) | 0.0455 (7) | 0.3393 (4) | 0.0314 (12) | |
| C4 | 0.2549 (4) | −0.0061 (7) | 0.3655 (4) | 0.0312 (13) | |
| H4 | 0.2040 | −0.0660 | 0.3244 | 0.037* | |
| C5 | 0.2572 (4) | 0.0324 (7) | 0.4540 (4) | 0.0333 (13) | |
| C6 | 0.3317 (4) | 0.1209 (7) | 0.5138 (4) | 0.0325 (13) | |
| H6 | 0.3323 | 0.1476 | 0.5724 | 0.039* | |
| C7 | 0.4852 (4) | 0.2632 (7) | 0.5544 (4) | 0.0323 (13) | |
| H7 | 0.4844 | 0.2872 | 0.6129 | 0.039* | |
| C8 | 0.7013 (4) | 0.4386 (7) | 0.5641 (4) | 0.0304 (12) | |
| C9 | 0.7872 (4) | 0.5200 (6) | 0.6326 (4) | 0.0301 (12) | |
| C10 | 0.8620 (4) | 0.5467 (7) | 0.6036 (4) | 0.0389 (14) | |
| H10 | 0.8576 | 0.5140 | 0.5444 | 0.047* | |
| C11 | 0.9424 (4) | 0.6211 (8) | 0.6616 (4) | 0.0429 (15) | |
| C12 | 0.9500 (4) | 0.6747 (9) | 0.7478 (5) | 0.0530 (17) | |
| H12 | 1.0052 | 0.7269 | 0.7863 | 0.064* | |
| C13 | 0.8755 (4) | 0.6511 (8) | 0.7772 (4) | 0.0489 (16) | |
| H13 | 0.8802 | 0.6884 | 0.8357 | 0.059* | |
| C14 | 0.7934 (5) | 0.5721 (7) | 0.7204 (4) | 0.0422 (15) | |
| H14 | 0.7433 | 0.5543 | 0.7407 | 0.051* | |
| H2 | 0.626 (5) | 0.411 (9) | 0.649 (2) | 0.080* | |
| H3A | 0.414 (6) | −0.082 (4) | 0.709 (3) | 0.080* | |
| H3B | 0.414 (5) | 0.097 (3) | 0.717 (3) | 0.080* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| I1 | 0.0401 (3) | 0.0640 (3) | 0.0293 (2) | −0.00844 (19) | 0.01519 (18) | −0.01025 (18) |
| I2 | 0.0423 (3) | 0.0602 (3) | 0.0522 (3) | −0.0090 (2) | 0.0281 (2) | −0.0014 (2) |
| Br1 | 0.0381 (4) | 0.0888 (6) | 0.0902 (6) | −0.0056 (4) | 0.0317 (4) | 0.0133 (5) |
| O1 | 0.029 (2) | 0.054 (3) | 0.027 (2) | −0.0065 (19) | 0.0114 (18) | −0.0023 (18) |
| O2 | 0.047 (3) | 0.067 (3) | 0.025 (2) | −0.009 (2) | 0.013 (2) | −0.004 (2) |
| O3 | 0.062 (3) | 0.079 (3) | 0.058 (3) | 0.014 (3) | 0.031 (3) | 0.017 (3) |
| N1 | 0.024 (2) | 0.032 (2) | 0.030 (3) | 0.0035 (19) | 0.003 (2) | 0.000 (2) |
| N2 | 0.026 (3) | 0.042 (3) | 0.026 (3) | −0.005 (2) | 0.007 (2) | −0.005 (2) |
| C1 | 0.027 (3) | 0.032 (3) | 0.029 (3) | −0.001 (2) | 0.008 (2) | 0.004 (2) |
| C2 | 0.028 (3) | 0.030 (3) | 0.021 (3) | 0.004 (2) | 0.009 (2) | 0.003 (2) |
| C3 | 0.037 (3) | 0.033 (3) | 0.026 (3) | 0.001 (3) | 0.012 (3) | −0.003 (2) |
| C4 | 0.025 (3) | 0.041 (3) | 0.027 (3) | −0.006 (2) | 0.009 (2) | −0.002 (2) |
| C5 | 0.030 (3) | 0.035 (3) | 0.037 (3) | 0.003 (2) | 0.014 (3) | 0.006 (2) |
| C6 | 0.035 (3) | 0.035 (3) | 0.031 (3) | 0.000 (2) | 0.015 (3) | −0.001 (2) |
| C7 | 0.033 (3) | 0.039 (3) | 0.024 (3) | −0.001 (3) | 0.010 (3) | 0.000 (2) |
| C8 | 0.030 (3) | 0.029 (3) | 0.029 (3) | 0.002 (2) | 0.006 (3) | 0.004 (2) |
| C9 | 0.028 (3) | 0.029 (3) | 0.031 (3) | −0.003 (2) | 0.008 (3) | 0.004 (2) |
| C10 | 0.039 (4) | 0.038 (3) | 0.039 (3) | −0.005 (3) | 0.013 (3) | 0.001 (3) |
| C11 | 0.032 (3) | 0.048 (4) | 0.045 (4) | −0.001 (3) | 0.009 (3) | 0.009 (3) |
| C12 | 0.031 (4) | 0.062 (4) | 0.053 (4) | −0.009 (3) | 0.000 (3) | 0.011 (3) |
| C13 | 0.048 (4) | 0.065 (4) | 0.031 (3) | −0.010 (3) | 0.011 (3) | −0.002 (3) |
| C14 | 0.046 (4) | 0.044 (4) | 0.042 (4) | −0.002 (3) | 0.022 (3) | 0.003 (3) |
Geometric parameters (Å, °)
| I1—C3 | 2.092 (5) | C4—C5 | 1.394 (7) |
| I2—C5 | 2.094 (6) | C4—H4 | 0.9300 |
| Br1—C11 | 1.898 (6) | C5—C6 | 1.362 (7) |
| O1—C2 | 1.364 (6) | C6—H6 | 0.9300 |
| O1—H1 | 0.8200 | C7—H7 | 0.9300 |
| O2—C8 | 1.222 (6) | C8—C9 | 1.496 (7) |
| O3—H3A | 0.86 (4) | C9—C10 | 1.377 (8) |
| O3—H3B | 0.84 (3) | C9—C14 | 1.390 (8) |
| N1—C7 | 1.267 (6) | C10—C11 | 1.359 (8) |
| N1—N2 | 1.356 (6) | C10—H10 | 0.9300 |
| N2—C8 | 1.357 (7) | C11—C12 | 1.363 (9) |
| N2—H2 | 0.89 (4) | C12—C13 | 1.373 (8) |
| C1—C6 | 1.390 (7) | C12—H12 | 0.9300 |
| C1—C2 | 1.403 (7) | C13—C14 | 1.384 (8) |
| C1—C7 | 1.445 (7) | C13—H13 | 0.9300 |
| C2—C3 | 1.380 (7) | C14—H14 | 0.9300 |
| C3—C4 | 1.379 (7) | ||
| C2—O1—H1 | 109.5 | N1—C7—C1 | 120.3 (5) |
| H3A—O3—H3B | 107 (3) | N1—C7—H7 | 119.9 |
| C7—N1—N2 | 121.9 (5) | C1—C7—H7 | 119.9 |
| N1—N2—C8 | 117.2 (4) | O2—C8—N2 | 120.4 (5) |
| N1—N2—H2 | 114 (5) | O2—C8—C9 | 122.2 (5) |
| C8—N2—H2 | 129 (5) | N2—C8—C9 | 117.4 (5) |
| C6—C1—C2 | 119.5 (5) | C10—C9—C14 | 120.0 (5) |
| C6—C1—C7 | 118.9 (5) | C10—C9—C8 | 116.2 (5) |
| C2—C1—C7 | 121.5 (5) | C14—C9—C8 | 123.7 (5) |
| O1—C2—C3 | 119.0 (4) | C11—C10—C9 | 119.8 (6) |
| O1—C2—C1 | 122.1 (5) | C11—C10—H10 | 120.1 |
| C3—C2—C1 | 118.8 (5) | C9—C10—H10 | 120.1 |
| C4—C3—C2 | 121.3 (5) | C10—C11—C12 | 121.4 (6) |
| C4—C3—I1 | 118.2 (4) | C10—C11—Br1 | 120.5 (5) |
| C2—C3—I1 | 120.5 (4) | C12—C11—Br1 | 118.1 (5) |
| C3—C4—C5 | 119.4 (5) | C11—C12—C13 | 119.4 (6) |
| C3—C4—H4 | 120.3 | C11—C12—H12 | 120.3 |
| C5—C4—H4 | 120.3 | C13—C12—H12 | 120.3 |
| C6—C5—C4 | 120.0 (5) | C12—C13—C14 | 120.5 (6) |
| C6—C5—I2 | 120.0 (4) | C12—C13—H13 | 119.7 |
| C4—C5—I2 | 120.0 (4) | C14—C13—H13 | 119.7 |
| C5—C6—C1 | 120.9 (5) | C13—C14—C9 | 118.8 (6) |
| C5—C6—H6 | 119.5 | C13—C14—H14 | 120.6 |
| C1—C6—H6 | 119.5 | C9—C14—H14 | 120.6 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O3—H3A···O1i | 0.86 (4) | 2.50 (6) | 3.131 (6) | 132 (6) |
| N2—H2···O3ii | 0.89 (4) | 2.08 (6) | 2.934 (6) | 162 (7) |
| O1—H1···N1 | 0.82 | 1.87 | 2.579 (6) | 144 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+1, y+1/2, −z+3/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SJ2600).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809010964/sj2600sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809010964/sj2600Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


