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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Mar 11;65(Pt 4):m379. doi: 10.1107/S1600536809007703

Tetra(chlorido/iodido)(1,10-phenanthroline)platinum(IV) hemi[di(chlorine/iodine)]

Nam-Ho Kim a, Kwang Ha a,*
PMCID: PMC2969087  PMID: 21582331

Abstract

The asymmetric unit of the title compound, [PtCl3.66I0.34(C12H8N2)]·0.5(Cl0.13I1.87), contains a neutral PtIV complex and one half of a halogen molecule. The PtIV ion is six-coordinated in a distorted octa­hedral environment by two N atoms of the 1,10-phenanthroline ligand and Cl or I atoms. The refinement of the structure and the EDX analysis indicate that the compound is a solid solution in which there is some substitution of Cl for I and vice versa. The chemical formula of the pure state of the compound would have been [PtCl4(C12H8N2)]·0.5I2. In the analysed crystal, two Cl atoms are partially (ca 25% and 9%) replaced by I atoms, and the I2 mol­ecule has a minor component modelled as ICl. As a result of the disorder, the different trans effects of the N and Cl/I atoms are not distinct. The complex displays inter­molecular π–π inter­actions between the six-membered rings, with a centroid–centroid distance of 3.771 (4) Å. There are also weak intra­molecular C—H⋯Cl hydrogen bonds.

Related literature

For details of some other Pt–phenanthroline complexes, see: Buse et al. (1977); Fanizzi et al. (1996); Kim et al. (2009a ,b ). For related Pt–bipyridine complexes, see: Hambley (1986); Hojjat Kashani et al. (2008). For bond-length data, see: Orpen et al. (1989).graphic file with name e-65-0m379-scheme1.jpg

Experimental

Crystal data

  • [PtCl3.66I0.34(C12H8N2)]·0.5(Cl0.13I1.87)

  • M r = 669.26

  • Orthorhombic, Inline graphic

  • a = 14.215 (5) Å

  • b = 12.733 (5) Å

  • c = 17.575 (6) Å

  • V = 3180.8 (19) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 11.92 mm−1

  • T = 293 K

  • 0.25 × 0.17 × 0.15 mm

Data collection

  • Bruker SMART 1000 CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2000) T min = 0.111, T max = 0.168

  • 17485 measured reflections

  • 3246 independent reflections

  • 2169 reflections with I > 2σ(I)

  • R int = 0.049

Refinement

  • R[F 2 > 2σ(F 2)] = 0.031

  • wR(F 2) = 0.062

  • S = 0.86

  • 3246 reflections

  • 194 parameters

  • 8 restraints

  • H-atom parameters constrained

  • Δρmax = 1.29 e Å−3

  • Δρmin = −0.50 e Å−3

Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809007703/pk2156sup1.cif

e-65-0m379-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809007703/pk2156Isup2.hkl

e-65-0m379-Isup2.hkl (159.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C1—H1⋯Cl2 0.93 2.73 3.320 (8) 122
C10—H10⋯Cl1 0.93 2.66 3.240 (7) 121

Acknowledgments

This work was supported by a Korea Research Foundation grant funded by the Korean Government (MOEHRD) (KRF-2007-412-J02001).

supplementary crystallographic information

Comment

The asymmetric unit of the title compound contains a neutral PtIV complex and one half-molecule of iodine which includes some Cl atoms (ca 6%). The PtIV ion is six-coordinated in a distorted octahedral environment by two N atoms of the 1,10-phenanthroline ligand and Cl or I atoms. The chemical formula of the pure state of the title compound would have been [PtCl4(C12H8N2)].0.5I2. In the particular crystal of the compound used, two Cl atoms (Cl3 and Cl4) are partially (ca 25% and 9%, respectively) displaced by the I atoms (I3 and I4) through the substitution reaction between the Cl- and I- ligand, and the I2 molecule also appears to have a minor component, that is I—Cl (Fig. 1 and 2). The chemical formula which resulted from the refinement of the structure was [PtCl3.66I0.34(C12H8N2)].0.5(Cl0.13I1.87), and in this case the ratio of the Cl atom to I atom is 2.91:1. An EDX analysis of the compound, however, gave a ratio of Cl:I = 2.47:1. Accordingly, the exact composition may very well be variable, and likely dependent on the exact conditions present during crystal formation. Even though these data are slightly different, they indicate clearly that the crystals are a solid solution in which there was some substitution of Cl for I and vice versa.

As a result of the different trans effects of the N and Cl atoms, the Pt—Cl bonds trans to the N atom are in general slightly shorter than bond lengths to mutually trans Cl atoms (Kim et al. 2009a and 2009b). But the trans effects of the N and Cl/I atoms in the crystal are not distinct owing to the disordered atoms. The Pt—I distance is restrained to the value given in table 9.6.3.3 of the International Tables Vol. C (Orpen et al., 1989) (2.658 Å). The main contributor to the distortion from a true octahedral structure is the tight N1—Pt1—N2 chelate angle (81.3 (2)°), which result in non-linear trans axes (<Cl1—Pt1—N1 = 174.14 (16)° and <Cl2—Pt1—N2 = 175.97 (17)°). The complex displays intermolecular π-π interactions between the six-membered rings, with a shortest centroid-centroid distance of 3.771 (4) Å and with a dihedral angle between the ring planes of 2.1 (3)°. There are also weak intramolecular C—H···Cl hydrogen bonds (Table 1).

The iodine molecule was presumedly formed as a consequence of the oxidation of the iodide ion by the Pt4+ ion, and crystallized with the partially substituted complex. The bond distance between the I atoms is 2.708 (2) Å.

Experimental

To a solution of [PtCl4(C12H8N2)].H2O (0.0821 g, 0.153 mmol) in H2O (20 ml) was added KI (0.1318 g, 0.794 mmol), and stirred for 2 h at room temperature. The precipitate was separated by filtration and washed with water (20 ml) and MeOH (20 ml) and dried under vacuum, to give a dark brown powder (0.0846 g). Black crystals suitable for X-ray analysis were isolated from an acetone solution of the reaction products. EDX analysis (%atom): Cl 62.30%, I 25.18%, Pt 12.52%.

Refinement

H atoms were positioned geometrically and allowed to ride on their respective parent atoms [C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C)]. The disordered Cl5 atom was refined isotropically. Eight restraints instructions were used for the refinement using the following SHELXL97 (Sheldrick, 2008) commands: EADP Cl3 I3 and Cl4 I4, SIMU 0.010 I1 Cl5, BIND I1 Cl5a and Cl5 I1a, FREE Cl5 Cl5a, DFIX 2.658 0.010 Pt1 I3 and Pt1 I4.

Figures

Fig. 1.

Fig. 1.

The disordered structure of the title compound, with displacement ellipsoids drawn at the 30% probability level for non-H atoms [Symmetry code: (a) 1 - x, 1 - y, -z]. The minor bonds are drawn with dashed lines.

Fig. 2.

Fig. 2.

View of a packing detail of the title compound. For the sake of clarity, only the major disorder component is shown.

Crystal data

[PtCl3.66I0.34(C12H8N2)]·0.5(Cl0.13I1.87) F(000) = 2424
Mr = 669.26 Dx = 2.795 Mg m3
Orthorhombic, Pbca Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2ab Cell parameters from 973 reflections
a = 14.215 (5) Å θ = 2.4–24.5°
b = 12.733 (5) Å µ = 11.92 mm1
c = 17.575 (6) Å T = 293 K
V = 3180.8 (19) Å3 Plate, black
Z = 8 0.25 × 0.17 × 0.15 mm

Data collection

Bruker SMART 1000 CCD diffractometer 3246 independent reflections
Radiation source: fine-focus sealed tube 2169 reflections with I > 2σ(I)
graphite Rint = 0.049
φ and ω scans θmax = 26.4°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2000) h = −15→17
Tmin = 0.111, Tmax = 0.168 k = −10→15
17485 measured reflections l = −17→21

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.062 H-atom parameters constrained
S = 0.86 w = 1/[σ2(Fo2) + (0.0244P)2] where P = (Fo2 + 2Fc2)/3
3246 reflections (Δ/σ)max = 0.001
194 parameters Δρmax = 1.29 e Å3
8 restraints Δρmin = −0.50 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
Pt1 −0.134096 (18) 0.30394 (2) 0.177609 (15) 0.03991 (10)
Cl1 −0.17047 (13) 0.14177 (15) 0.22685 (10) 0.0521 (5)
Cl2 −0.28869 (12) 0.36077 (15) 0.19550 (10) 0.0512 (5)
Cl3 −0.0903 (14) 0.3607 (17) 0.2949 (8) 0.0494 (13) 0.746 (3)
I3 −0.0759 (11) 0.3695 (13) 0.3094 (6) 0.0494 (13) 0.254 (3)
Cl4 −0.1730 (7) 0.2478 (8) 0.0572 (3) 0.0518 (8) 0.913 (3)
I4 −0.177 (2) 0.238 (2) 0.0398 (9) 0.0518 (8) 0.087 (3)
N1 −0.0875 (4) 0.4446 (4) 0.1355 (3) 0.0393 (14)
N2 0.0029 (4) 0.2642 (4) 0.1585 (3) 0.0388 (13)
C1 −0.1341 (5) 0.5328 (6) 0.1283 (4) 0.0517 (19)
H1 −0.1978 0.5341 0.1403 0.062*
C2 −0.0911 (6) 0.6243 (6) 0.1031 (4) 0.058 (2)
H2 −0.1256 0.6863 0.0999 0.070*
C3 0.0015 (6) 0.6235 (6) 0.0831 (4) 0.055 (2)
H3 0.0305 0.6846 0.0660 0.066*
C4 0.0535 (5) 0.5285 (6) 0.0887 (4) 0.0438 (18)
C5 0.1496 (5) 0.5174 (6) 0.0688 (4) 0.0484 (19)
H5 0.1820 0.5741 0.0481 0.058*
C6 0.1946 (5) 0.4255 (6) 0.0796 (4) 0.050 (2)
H6 0.2581 0.4210 0.0672 0.061*
C7 0.1485 (5) 0.3347 (5) 0.1093 (4) 0.0403 (17)
C8 0.1899 (5) 0.2382 (6) 0.1246 (4) 0.052 (2)
H8 0.2534 0.2282 0.1141 0.062*
C9 0.1393 (5) 0.1590 (6) 0.1546 (4) 0.0494 (19)
H9 0.1678 0.0947 0.1647 0.059*
C10 0.0446 (5) 0.1735 (5) 0.1703 (4) 0.0447 (18)
H10 0.0098 0.1177 0.1897 0.054*
C11 0.0538 (5) 0.3460 (6) 0.1273 (4) 0.0384 (17)
C12 0.0055 (5) 0.4415 (5) 0.1167 (3) 0.0368 (16)
I1 0.56522 (7) 0.45323 (7) 0.04476 (5) 0.0912 (4) 0.936 (3)
Cl5 0.558 (3) 0.496 (4) 0.021 (2) 0.062 (9)* 0.064 (3)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Pt1 0.04138 (16) 0.03167 (16) 0.04668 (17) −0.00138 (13) 0.00129 (14) 0.00057 (14)
Cl1 0.0561 (11) 0.0392 (11) 0.0608 (12) −0.0060 (9) 0.0047 (9) 0.0072 (9)
Cl2 0.0490 (11) 0.0431 (12) 0.0616 (12) 0.0050 (9) 0.0083 (9) 0.0040 (9)
Cl3 0.064 (4) 0.045 (3) 0.039 (4) −0.005 (2) −0.007 (2) −0.014 (3)
I3 0.064 (4) 0.045 (3) 0.039 (4) −0.005 (2) −0.007 (2) −0.014 (3)
Cl4 0.0649 (15) 0.052 (2) 0.038 (3) −0.0073 (14) −0.006 (3) −0.004 (2)
I4 0.0649 (15) 0.052 (2) 0.038 (3) −0.0073 (14) −0.006 (3) −0.004 (2)
N1 0.044 (4) 0.029 (4) 0.045 (3) −0.001 (3) −0.001 (3) −0.002 (3)
N2 0.037 (3) 0.032 (3) 0.046 (3) 0.000 (3) −0.005 (3) −0.001 (3)
C1 0.053 (5) 0.048 (5) 0.055 (5) 0.001 (4) −0.002 (4) −0.007 (4)
C2 0.057 (5) 0.031 (5) 0.086 (6) 0.006 (4) −0.009 (5) −0.004 (4)
C3 0.071 (6) 0.034 (5) 0.060 (5) −0.011 (4) −0.003 (4) 0.003 (4)
C4 0.052 (5) 0.036 (5) 0.043 (4) −0.006 (4) −0.007 (4) −0.003 (3)
C5 0.050 (5) 0.044 (5) 0.051 (5) −0.017 (4) −0.006 (4) 0.007 (4)
C6 0.045 (5) 0.052 (6) 0.054 (5) −0.012 (4) 0.006 (4) −0.011 (4)
C7 0.044 (5) 0.036 (4) 0.041 (4) −0.001 (3) −0.002 (3) −0.006 (3)
C8 0.046 (5) 0.053 (5) 0.056 (5) 0.007 (4) 0.006 (4) −0.004 (4)
C9 0.047 (5) 0.046 (5) 0.055 (5) 0.009 (4) −0.007 (4) −0.010 (4)
C10 0.050 (5) 0.032 (5) 0.052 (5) −0.006 (3) 0.002 (4) −0.002 (3)
C11 0.040 (4) 0.037 (4) 0.038 (4) −0.007 (3) −0.008 (3) −0.001 (3)
C12 0.042 (4) 0.034 (4) 0.034 (4) −0.002 (3) −0.004 (3) 0.002 (3)
I1 0.1295 (7) 0.0635 (6) 0.0805 (6) −0.0192 (5) 0.0312 (5) −0.0058 (4)

Geometric parameters (Å, °)

Pt1—N2 2.040 (5) C4—C12 1.391 (9)
Pt1—N1 2.048 (5) C4—C5 1.417 (9)
Pt1—Cl3 2.272 (9) C5—C6 1.346 (9)
Pt1—Cl1 2.2977 (19) C5—H5 0.9300
Pt1—Cl4 2.301 (4) C6—C7 1.428 (9)
Pt1—Cl2 2.3347 (19) C6—H6 0.9300
Pt1—I3 2.598 (7) C7—C8 1.389 (9)
Pt1—I4 2.635 (9) C7—C11 1.391 (8)
N1—C1 1.309 (8) C8—C9 1.346 (10)
N1—C12 1.364 (8) C8—H8 0.9300
N2—C10 1.316 (8) C9—C10 1.387 (9)
N2—C11 1.381 (8) C9—H9 0.9300
C1—C2 1.388 (10) C10—H10 0.9300
C1—H1 0.9300 C11—C12 1.408 (9)
C2—C3 1.364 (10) I1—Cl5i 2.19 (4)
C2—H2 0.9300 I1—I1i 2.708 (2)
C3—C4 1.421 (10) Cl5—I1i 2.19 (4)
C3—H3 0.9300
N2—Pt1—N1 81.3 (2) N1—C1—H1 119.0
N2—Pt1—Cl3 88.1 (6) C2—C1—H1 119.0
N1—Pt1—Cl3 87.8 (6) C3—C2—C1 120.0 (7)
N2—Pt1—Cl1 93.11 (17) C3—C2—H2 120.0
N1—Pt1—Cl1 174.14 (16) C1—C2—H2 120.0
Cl3—Pt1—Cl1 90.3 (6) C2—C3—C4 119.4 (7)
N2—Pt1—Cl4 90.0 (3) C2—C3—H3 120.3
N1—Pt1—Cl4 91.0 (3) C4—C3—H3 120.3
Cl3—Pt1—Cl4 177.9 (6) C12—C4—C5 118.7 (7)
Cl1—Pt1—Cl4 90.8 (3) C12—C4—C3 116.6 (7)
N2—Pt1—Cl2 175.97 (17) C5—C4—C3 124.7 (7)
N1—Pt1—Cl2 94.69 (16) C6—C5—C4 120.7 (7)
Cl3—Pt1—Cl2 92.1 (5) C6—C5—H5 119.7
Cl1—Pt1—Cl2 90.91 (7) C4—C5—H5 119.7
Cl4—Pt1—Cl2 89.7 (3) C5—C6—C7 122.5 (7)
N2—Pt1—I3 85.6 (4) C5—C6—H6 118.8
N1—Pt1—I3 86.5 (4) C7—C6—H6 118.8
Cl3—Pt1—I3 2.7 (9) C8—C7—C11 117.2 (7)
Cl1—Pt1—I3 91.4 (4) C8—C7—C6 126.4 (7)
Cl4—Pt1—I3 175.2 (4) C11—C7—C6 116.3 (6)
Cl2—Pt1—I3 94.6 (4) C9—C8—C7 120.8 (7)
N2—Pt1—I4 89.4 (8) C9—C8—H8 119.6
N1—Pt1—I4 91.3 (7) C7—C8—H8 119.6
Cl3—Pt1—I4 177.5 (9) C8—C9—C10 119.8 (7)
Cl1—Pt1—I4 90.4 (7) C8—C9—H9 120.1
Cl4—Pt1—I4 0.7 (10) C10—C9—H9 120.1
Cl2—Pt1—I4 90.3 (7) N2—C10—C9 121.5 (7)
I3—Pt1—I4 174.8 (8) N2—C10—H10 119.2
C1—N1—C12 119.5 (6) C9—C10—H10 119.2
C1—N1—Pt1 128.4 (5) N2—C11—C7 121.3 (6)
C12—N1—Pt1 112.1 (4) N2—C11—C12 116.6 (6)
C10—N2—C11 119.3 (6) C7—C11—C12 122.0 (6)
C10—N2—Pt1 128.5 (5) N1—C12—C4 122.5 (6)
C11—N2—Pt1 112.2 (4) N1—C12—C11 117.7 (6)
N1—C1—C2 121.9 (7) C4—C12—C11 119.7 (6)
N2—Pt1—N1—C1 −176.8 (6) C3—C4—C5—C6 176.6 (7)
Cl3—Pt1—N1—C1 −88.4 (8) C4—C5—C6—C7 1.6 (11)
Cl4—Pt1—N1—C1 93.3 (6) C5—C6—C7—C8 −177.6 (7)
Cl2—Pt1—N1—C1 3.6 (6) C5—C6—C7—C11 −0.4 (10)
I3—Pt1—N1—C1 −90.8 (7) C11—C7—C8—C9 1.1 (10)
I4—Pt1—N1—C1 93.9 (9) C6—C7—C8—C9 178.3 (7)
N2—Pt1—N1—C12 0.2 (4) C7—C8—C9—C10 0.1 (11)
Cl3—Pt1—N1—C12 88.7 (7) C11—N2—C10—C9 2.1 (9)
Cl4—Pt1—N1—C12 −89.7 (5) Pt1—N2—C10—C9 −179.7 (5)
Cl2—Pt1—N1—C12 −179.4 (4) C8—C9—C10—N2 −1.7 (10)
I3—Pt1—N1—C12 86.3 (5) C10—N2—C11—C7 −0.9 (9)
I4—Pt1—N1—C12 −89.0 (8) Pt1—N2—C11—C7 −179.4 (5)
N1—Pt1—N2—C10 −179.6 (6) C10—N2—C11—C12 −179.4 (6)
Cl3—Pt1—N2—C10 92.4 (8) Pt1—N2—C11—C12 2.1 (7)
Cl1—Pt1—N2—C10 2.2 (5) C8—C7—C11—N2 −0.7 (9)
Cl4—Pt1—N2—C10 −88.6 (6) C6—C7—C11—N2 −178.2 (6)
I3—Pt1—N2—C10 93.4 (7) C8—C7—C11—C12 177.7 (6)
I4—Pt1—N2—C10 −88.2 (9) C6—C7—C11—C12 0.3 (9)
N1—Pt1—N2—C11 −1.3 (4) C1—N1—C12—C4 −1.0 (9)
Cl3—Pt1—N2—C11 −89.3 (7) Pt1—N1—C12—C4 −178.3 (5)
Cl1—Pt1—N2—C11 −179.5 (4) C1—N1—C12—C11 178.2 (6)
Cl4—Pt1—N2—C11 89.7 (5) Pt1—N1—C12—C11 0.9 (7)
I3—Pt1—N2—C11 −88.3 (6) C5—C4—C12—N1 −178.4 (6)
I4—Pt1—N2—C11 90.1 (8) C3—C4—C12—N1 2.3 (9)
C12—N1—C1—C2 −1.2 (10) C5—C4—C12—C11 2.4 (9)
Pt1—N1—C1—C2 175.7 (5) C3—C4—C12—C11 −176.9 (6)
N1—C1—C2—C3 1.8 (11) N2—C11—C12—N1 −2.0 (9)
C1—C2—C3—C4 −0.4 (11) C7—C11—C12—N1 179.5 (6)
C2—C3—C4—C12 −1.6 (10) N2—C11—C12—C4 177.2 (6)
C2—C3—C4—C5 179.2 (7) C7—C11—C12—C4 −1.3 (10)
C12—C4—C5—C6 −2.6 (10)

Symmetry codes: (i) −x+1, −y+1, −z.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C1—H1···Cl2 0.93 2.73 3.320 (8) 122
C10—H10···Cl1 0.93 2.66 3.240 (7) 121

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: PK2156).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809007703/pk2156sup1.cif

e-65-0m379-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809007703/pk2156Isup2.hkl

e-65-0m379-Isup2.hkl (159.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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