Abstract
The geometrical parameters of the title compound, C16H11NO3S, are in the usual ranges. The two aromatic residues are not coplanar and are twisted by a dihedral angle of 66.63 (6)°. The crystal structure is stabilized by N—H⋯O and O—H⋯S interactions.
Related literature
For literature on coumarins, see: Campbell (1959 ▶); Murray et al. (1982 ▶); Wolska et al. (1990 ▶); Harvey (1999 ▶); Matern et al. (1999 ▶); Yang et al. (1992 ▶); Tsai et al. (2000 ▶).
Experimental
Crystal data
C16H11NO3S
M r = 297.33
Monoclinic,
a = 14.8059 (9) Å
b = 5.5245 (4) Å
c = 17.4438 (12) Å
β = 109.091 (7)°
V = 1348.34 (16) Å3
Z = 4
Mo Kα radiation
μ = 0.25 mm−1
T = 293 K
0.30 × 0.24 × 0.18 mm
Data collection
Oxford Diffraction Xcalibur diffractometer
Absorption correction: none
11450 measured reflections
4408 independent reflections
2320 reflections with I > 2σ(I)
R int = 0.036
Refinement
R[F 2 > 2σ(F 2)] = 0.049
wR(F 2) = 0.134
S = 1.01
4408 reflections
235 parameters
All H-atom parameters refined
Δρmax = 0.24 e Å−3
Δρmin = −0.23 e Å−3
Data collection: CrysAlisPro (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlisPro; data reduction: CrysAlis RED (Oxford Diffraction, 2007 ▶); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809011246/jh2075sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809011246/jh2075Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1A⋯O2 | 0.96 (2) | 1.77 (2) | 2.5923 (19) | 141 (2) |
| O3—H3A⋯S1 | 1.05 (2) | 1.81 (3) | 2.8163 (15) | 159 (2) |
Acknowledgments
The authors are thankful to the Department of Science and Technology of the Government of India for funding under research project SR/S2/CMP-47/2003.
supplementary crystallographic information
Comment
Coumarins belong to a group of compounds known as benzopyrones, all of which consist of a benzene ring joined to a pyrone moiety.
Coumarins are found to have a wide spectrum of biological activity, e.g. antithronbotic effect, vascodilating effect on vessel, tonic influence on capillary blood vessels, reduction of blood pressure, antispastic and photosensitizing effect (Wolska et al., 1990).
Interestingly, coumarins exhibit inhibitory effect on DNA gyrase, which may be linked to anti-HIV (human immuno deficiency virus) activity (Matern et al., 1999).
Coumarins are also found to exhibit anti-malarial activity (Yang et al., 1992).
Recently Collinin, isolated from Zathoxylum Schinifolium, has been found to exhibit anti-HBV (hepatitis B virus) activity (Tsai et al., 2000).
Owing to the general importance of these coumarin analogues we report herein the synthesis and crystal structure of a new coumarin 3-anilinothiocarbonyl-4-hydroxychromen-2-one, (I).
The geometrical parameters (i.e. bond distances and angles) of (I) are in the usual ranges. The two aromatic residues are not coplanar and are twisted by a dihedral angle of 66.63 (6)°. The crystal structure is stabilized by X—H···A interactions.
Experimental
Scheme1: The mixture of 4-hydroxy coumarin, phenylisothiocyanate was taken in THF.The base Na2CO3 was also added to it. The reaction mixture was refluxed on water bath for three hours. Progress of the reaction was monitored by TLC. After completion the reaction mixture was poured into water and worked up with ether and then in ethyl acetate. The ether layer showed the presence of three compounds from which the title compound (I) was separated by column chromatography followed by crystallization from chloroform-methanol as white crystalline solid. Melting point: 421–423 K.
Refinement
All H atoms were located from difference Fourier map and refined isotopically with distance restraints 0.86–1.05 Å.
Figures
Fig. 1.
View of (I) (50% probability displacement ellipsoids)
Fig. 2.
Depiction of X—H···A interactions in the title compound(I)
Fig. 3.
The synthesis of the title compound.
Crystal data
| C16H11NO3S | F(000) = 616 |
| Mr = 297.33 | Dx = 1.465 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| a = 14.8059 (9) Å | Cell parameters from 2320 reflections |
| b = 5.5245 (4) Å | θ = 2.9–32.3° |
| c = 17.4438 (12) Å | µ = 0.25 mm−1 |
| β = 109.091 (7)° | T = 293 K |
| V = 1348.34 (16) Å3 | Rectangular, yellow |
| Z = 4 | 0.30 × 0.24 × 0.18 mm |
Data collection
| Oxford Diffraction Xcalibur diffractometer | 2320 reflections with I > 2σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.036 |
| graphite | θmax = 32.3°, θmin = 2.9° |
| ω–2θ scans | h = −20→21 |
| 11450 measured reflections | k = −8→5 |
| 4408 independent reflections | l = −25→26 |
Refinement
| Refinement on F2 | 0 constraints |
| Least-squares matrix: full | All H-atom parameters refined |
| R[F2 > 2σ(F2)] = 0.049 | w = 1/[σ2(Fo2) + (0.0645P)2] where P = (Fo2 + 2Fc2)/3 |
| wR(F2) = 0.134 | (Δ/σ)max < 0.001 |
| S = 1.01 | Δρmax = 0.24 e Å−3 |
| 4408 reflections | Δρmin = −0.23 e Å−3 |
| 235 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 0 restraints | Extinction coefficient: 0.0079 (18) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| H3 | −0.2431 (14) | −0.089 (4) | −0.0463 (12) | 0.058 (6)* | |
| H1 | −0.1035 (12) | 0.344 (4) | 0.1367 (11) | 0.044 (5)* | |
| H4 | −0.1108 (14) | −0.346 (4) | −0.0190 (11) | 0.053 (6)* | |
| H2 | −0.2420 (15) | 0.255 (4) | 0.0323 (13) | 0.060 (6)* | |
| H1A | 0.2933 (15) | −0.272 (4) | 0.2272 (13) | 0.066 (7)* | |
| H14 | 0.6547 (16) | −0.057 (4) | 0.4609 (13) | 0.074 (6)* | |
| H12 | 0.4091 (17) | −0.402 (5) | 0.3868 (13) | 0.080 (8)* | |
| H15 | 0.5906 (18) | 0.239 (5) | 0.3553 (16) | 0.095 (9)* | |
| H16 | 0.4290 (17) | 0.200 (5) | 0.2686 (16) | 0.084 (8)* | |
| H13 | 0.5615 (19) | −0.365 (5) | 0.4674 (16) | 0.099 (9)* | |
| H3A | 0.127 (2) | 0.298 (5) | 0.2783 (16) | 0.102 (9)* | |
| S1 | 0.24977 (3) | 0.22219 (9) | 0.33460 (3) | 0.05005 (18) | |
| C8 | 0.14300 (10) | −0.0442 (3) | 0.20025 (9) | 0.0319 (3) | |
| O1 | 0.04858 (8) | −0.2950 (2) | 0.08806 (7) | 0.0400 (3) | |
| O2 | 0.19660 (8) | −0.3959 (2) | 0.14831 (7) | 0.0497 (3) | |
| C10 | 0.23535 (11) | 0.0021 (3) | 0.26441 (9) | 0.0349 (4) | |
| O3 | 0.06066 (9) | 0.2954 (2) | 0.23189 (8) | 0.0470 (3) | |
| C6 | −0.02392 (11) | 0.0583 (3) | 0.12239 (9) | 0.0329 (4) | |
| C7 | 0.06394 (11) | 0.1047 (3) | 0.18839 (9) | 0.0338 (4) | |
| N1 | 0.30848 (10) | −0.1395 (3) | 0.26561 (9) | 0.0452 (4) | |
| C5 | −0.02859 (11) | −0.1432 (3) | 0.07446 (9) | 0.0333 (4) | |
| C1 | −0.10418 (12) | 0.2061 (3) | 0.10584 (12) | 0.0423 (4) | |
| C4 | −0.10991 (12) | −0.2023 (4) | 0.01022 (11) | 0.0420 (4) | |
| C9 | 0.13442 (12) | −0.2508 (3) | 0.14694 (10) | 0.0351 (4) | |
| C11 | 0.40436 (12) | −0.1113 (4) | 0.32054 (11) | 0.0449 (4) | |
| C2 | −0.18535 (13) | 0.1526 (4) | 0.04245 (12) | 0.0494 (5) | |
| C3 | −0.18805 (13) | −0.0511 (4) | −0.00491 (11) | 0.0484 (5) | |
| C16 | 0.45938 (15) | 0.0776 (4) | 0.31041 (15) | 0.0619 (6) | |
| C12 | 0.44115 (17) | −0.2784 (5) | 0.37918 (17) | 0.0725 (7) | |
| C15 | 0.55294 (16) | 0.0988 (5) | 0.36243 (18) | 0.0735 (7) | |
| C14 | 0.58922 (15) | −0.0672 (5) | 0.42249 (17) | 0.0769 (8) | |
| C13 | 0.53483 (19) | −0.2533 (5) | 0.4308 (2) | 0.0947 (11) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| S1 | 0.0422 (3) | 0.0555 (3) | 0.0476 (3) | −0.0063 (2) | 0.00809 (19) | −0.0194 (2) |
| C8 | 0.0336 (8) | 0.0328 (8) | 0.0296 (8) | −0.0035 (7) | 0.0105 (6) | −0.0054 (7) |
| O1 | 0.0368 (6) | 0.0394 (7) | 0.0388 (6) | 0.0011 (5) | 0.0053 (5) | −0.0093 (5) |
| O2 | 0.0435 (7) | 0.0478 (8) | 0.0498 (7) | 0.0107 (6) | 0.0044 (5) | −0.0145 (6) |
| C10 | 0.0351 (8) | 0.0355 (9) | 0.0351 (8) | −0.0044 (7) | 0.0128 (6) | −0.0023 (7) |
| O3 | 0.0429 (7) | 0.0470 (8) | 0.0490 (7) | 0.0045 (6) | 0.0122 (6) | −0.0170 (6) |
| C6 | 0.0341 (8) | 0.0331 (9) | 0.0323 (8) | −0.0012 (7) | 0.0119 (6) | 0.0017 (7) |
| C7 | 0.0366 (8) | 0.0337 (9) | 0.0335 (8) | −0.0050 (7) | 0.0149 (6) | −0.0015 (7) |
| N1 | 0.0335 (7) | 0.0466 (9) | 0.0490 (9) | −0.0002 (7) | 0.0047 (6) | −0.0124 (8) |
| C5 | 0.0334 (8) | 0.0325 (9) | 0.0344 (8) | −0.0012 (7) | 0.0113 (6) | 0.0034 (7) |
| C1 | 0.0434 (10) | 0.0391 (10) | 0.0451 (10) | 0.0058 (8) | 0.0154 (8) | 0.0049 (9) |
| C4 | 0.0413 (9) | 0.0444 (11) | 0.0373 (9) | −0.0086 (8) | 0.0087 (7) | −0.0007 (8) |
| C9 | 0.0342 (8) | 0.0365 (9) | 0.0338 (8) | −0.0028 (7) | 0.0099 (6) | −0.0032 (7) |
| C11 | 0.0334 (8) | 0.0442 (11) | 0.0521 (11) | −0.0010 (8) | 0.0072 (8) | −0.0101 (9) |
| C2 | 0.0370 (9) | 0.0545 (13) | 0.0525 (11) | 0.0086 (9) | 0.0088 (8) | 0.0123 (10) |
| C3 | 0.0347 (9) | 0.0594 (13) | 0.0439 (10) | −0.0065 (9) | 0.0030 (8) | 0.0094 (9) |
| C16 | 0.0458 (11) | 0.0608 (14) | 0.0740 (15) | −0.0072 (11) | 0.0124 (10) | 0.0046 (12) |
| C12 | 0.0509 (12) | 0.0590 (15) | 0.0860 (17) | −0.0148 (11) | −0.0073 (11) | 0.0140 (13) |
| C15 | 0.0425 (11) | 0.0662 (16) | 0.110 (2) | −0.0167 (12) | 0.0226 (12) | −0.0133 (15) |
| C14 | 0.0402 (11) | 0.0640 (16) | 0.103 (2) | −0.0036 (11) | −0.0091 (12) | −0.0183 (15) |
| C13 | 0.0616 (15) | 0.0752 (18) | 0.105 (2) | −0.0106 (14) | −0.0302 (15) | 0.0220 (16) |
Geometric parameters (Å, °)
| S1—C10 | 1.6889 (17) | C1—H1 | 0.929 (19) |
| S1—H3A | 1.81 (3) | C4—C3 | 1.381 (3) |
| C8—C7 | 1.390 (2) | C4—H4 | 0.94 (2) |
| C8—C9 | 1.452 (2) | C11—C12 | 1.353 (3) |
| C8—C10 | 1.479 (2) | C11—C16 | 1.370 (3) |
| O1—C9 | 1.3696 (19) | C2—C3 | 1.389 (3) |
| O1—C5 | 1.3737 (19) | C2—H2 | 0.98 (2) |
| O2—C9 | 1.215 (2) | C3—H3 | 0.919 (19) |
| C10—N1 | 1.330 (2) | C16—C15 | 1.391 (3) |
| O3—C7 | 1.308 (2) | C16—H16 | 0.99 (3) |
| O3—H3A | 1.05 (3) | C12—C13 | 1.392 (3) |
| C6—C5 | 1.381 (2) | C12—H12 | 0.86 (3) |
| C6—C1 | 1.392 (2) | C15—C14 | 1.363 (4) |
| C6—C7 | 1.450 (2) | C15—H15 | 0.98 (3) |
| N1—C11 | 1.438 (2) | C14—C13 | 1.343 (4) |
| N1—H1A | 0.97 (2) | C14—H14 | 0.98 (2) |
| C5—C4 | 1.389 (2) | C13—H13 | 0.88 (3) |
| C1—C2 | 1.373 (3) | ||
| C10—S1—H3A | 84.7 (8) | O2—C9—O1 | 114.13 (14) |
| C7—C8—C9 | 118.50 (14) | O2—C9—C8 | 126.81 (15) |
| C7—C8—C10 | 122.40 (14) | O1—C9—C8 | 119.06 (14) |
| C9—C8—C10 | 119.10 (14) | C12—C11—C16 | 120.52 (19) |
| C9—O1—C5 | 122.43 (13) | C12—C11—N1 | 119.68 (18) |
| N1—C10—C8 | 117.17 (15) | C16—C11—N1 | 119.71 (18) |
| N1—C10—S1 | 120.18 (12) | C1—C2—C3 | 120.06 (18) |
| C8—C10—S1 | 122.65 (12) | C1—C2—H2 | 119.6 (13) |
| C7—O3—H3A | 104.8 (15) | C3—C2—H2 | 120.3 (12) |
| C5—C6—C1 | 118.51 (15) | C4—C3—C2 | 121.14 (17) |
| C5—C6—C7 | 118.51 (14) | C4—C3—H3 | 119.0 (13) |
| C1—C6—C7 | 122.98 (16) | C2—C3—H3 | 119.9 (13) |
| O3—C7—C8 | 125.40 (14) | C11—C16—C15 | 119.2 (2) |
| O3—C7—C6 | 114.13 (14) | C11—C16—H16 | 118.0 (14) |
| C8—C7—C6 | 120.45 (15) | C15—C16—H16 | 122.7 (15) |
| C10—N1—C11 | 124.58 (16) | C11—C12—C13 | 119.4 (2) |
| C10—N1—H1A | 115.4 (13) | C11—C12—H12 | 123.2 (15) |
| C11—N1—H1A | 120.0 (13) | C13—C12—H12 | 117.4 (15) |
| O1—C5—C6 | 120.90 (14) | C14—C15—C16 | 120.2 (2) |
| O1—C5—C4 | 116.65 (15) | C14—C15—H15 | 121.9 (15) |
| C6—C5—C4 | 122.44 (15) | C16—C15—H15 | 117.9 (15) |
| C2—C1—C6 | 120.24 (19) | C13—C14—C15 | 119.9 (2) |
| C2—C1—H1 | 118.9 (11) | C13—C14—H14 | 117.6 (13) |
| C6—C1—H1 | 120.8 (11) | C15—C14—H14 | 122.5 (13) |
| C3—C4—C5 | 117.60 (18) | C14—C13—C12 | 120.8 (3) |
| C3—C4—H4 | 123.0 (12) | C14—C13—H13 | 118.1 (18) |
| C5—C4—H4 | 119.3 (12) | C12—C13—H13 | 120.9 (18) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1A···O2 | 0.96 (2) | 1.77 (2) | 2.5923 (19) | 141 (2) |
| O3—H3A···S1 | 1.05 (2) | 1.81 (3) | 2.8163 (15) | 159 (2) |
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: JH2075).
References
- Campbell, N. (1959). Chemistry of Carbon Compounds, edited by E. H. Rodd, Vol. 6, Part 4B, p. 875. Amsterdam: Elsevier.
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- Matern, U., Luer, P. & Kreusch, D. (1999). Biosynthesis of Coumarins In Comprehensive Natural Products Chemistry, Vol 1, pp. 623–637. Amsterdam: Elsevier.
- Murray, R. D. H., Mendez, J. & Brown, S. A. (1982). In The Natural Coumarins – Occurance Chemistry and Biochemistry New York: Wiley & Sons.
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- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809011246/jh2075sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809011246/jh2075Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report



