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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Jun 24;65(Pt 7):m816. doi: 10.1107/S1600536809022259

[N′-(5-Chloro-2-oxidobenzyl­idene-κO)-3-hydr­oxy-2-naphthohydrazidato-κ2 N′,O]dimethyl­tin(IV)

See Mun Lee a, Kong Mun Lo a, Hapipah Mohd Ali a, Seik Weng Ng a,*
PMCID: PMC2969223  PMID: 21582739

Abstract

The SnIV atom in the title compound, [Sn(CH3)2(C18H11ClN2O3)], shows a trans-C2NO2Sn trigonal-bipyramidal coordin­ation; the axial O—Sn—O angle is 155.22 (5)°. The tridentate N′-(5-chloro-2-oxidobenzyl­idene)-3-hydr­oxy-2-naphthohydrazidate dianion is stabilized by an intra­molecular O—H⋯N hydrogen bond.

Related literature

The dianions of similar N′-(2-hydroxy­benzyl­idene)benzohydrazones O,N,O′-chelate tin in organotin compounds; see: Labib et al. (1996); Samanta et al. (2007).graphic file with name e-65-0m816-scheme1.jpg

Experimental

Crystal data

  • [Sn(CH3)2(C18H11ClN2O3)]

  • M r = 487.50

  • Triclinic, Inline graphic

  • a = 6.8374 (1) Å

  • b = 11.6207 (2) Å

  • c = 12.0159 (2) Å

  • α = 86.874 (1)°

  • β = 75.926 (1)°

  • γ = 80.635 (1)°

  • V = 913.61 (3) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 1.57 mm−1

  • T = 100 K

  • 0.30 × 0.20 × 0.10 mm

Data collection

  • Bruker SMART APEX diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.623, T max = 0.746 (expected range = 0.714–0.855)

  • 8585 measured reflections

  • 4182 independent reflections

  • 3924 reflections with I > 2σ(I)

  • R int = 0.015

Refinement

  • R[F 2 > 2σ(F 2)] = 0.019

  • wR(F 2) = 0.049

  • S = 1.04

  • 4182 reflections

  • 250 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.65 e Å−3

  • Δρmin = −0.58 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2009).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809022259/tk2476sup1.cif

e-65-0m816-sup1.cif (20.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022259/tk2476Isup2.hkl

e-65-0m816-Isup2.hkl (204.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O3—H3⋯N2 0.83 (1) 1.86 (2) 2.604 (2) 148 (2)

Acknowledgments

We thank the University of Malaya (PS320/2008C, RG020/09AFR) for supporting this study.

supplementary crystallographic information

Experimental

The Schiff base was synthesized by the condensation of 3-hydroxy-2-naphthoylhydrazide and 5-chorosalicylaldehyde. The Schiff base (0.50 g, 1.5 mmol) and dimethyltin oxide (0.24 g, 1.5 mmol) were heated in methanol until the oxide dissolved completely; the filtered solution yielded yellow crystals when the solvent was allowed to evaporate over a few days.

Refinement

Hydrogen atoms were placed at calculated positions (C–H 0.95–0.98 Å) and were treated as riding on their parent atoms, with U(H) set to 1.2–1.5Ueq(C). The hydroxy H-atom was refined with a distance restraint of 0.84±0.01 Å.

Figures

Fig. 1.

Fig. 1.

Thermal ellipsoid plot (Barbour, 2001) of (CH3)2Sn(C18H11N2O3) at the 70% probability level. Hydrogen atoms are drawn as spheres of arbitrary radius.

Crystal data

[Sn(CH3)2(C18H11ClN2O3)] Z = 2
Mr = 487.50 F(000) = 484
Triclinic, P1 Dx = 1.772 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 6.8374 (1) Å Cell parameters from 6181 reflections
b = 11.6207 (2) Å θ = 2.5–28.3°
c = 12.0159 (2) Å µ = 1.57 mm1
α = 86.874 (1)° T = 100 K
β = 75.926 (1)° Block, yellow
γ = 80.635 (1)° 0.30 × 0.20 × 0.10 mm
V = 913.61 (3) Å3

Data collection

Bruker SMART APEX diffractometer 4182 independent reflections
Radiation source: fine-focus sealed tube 3924 reflections with I > 2σ(I)
graphite Rint = 0.015
ω scans θmax = 27.5°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −8→8
Tmin = 0.623, Tmax = 0.746 k = −14→15
8585 measured reflections l = −15→15

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.019 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.049 H atoms treated by a mixture of independent and constrained refinement
S = 1.04 w = 1/[σ2(Fo2) + (0.0261P)2 + 0.3698P] where P = (Fo2 + 2Fc2)/3
4182 reflections (Δ/σ)max = 0.001
250 parameters Δρmax = 0.65 e Å3
1 restraint Δρmin = −0.58 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Sn1 0.249480 (17) 0.940034 (10) 0.829046 (10) 0.01557 (5)
Cl1 0.43674 (7) 1.55715 (4) 0.85417 (4) 0.02564 (11)
O1 0.1479 (2) 1.10418 (11) 0.90330 (12) 0.0216 (3)
O2 0.4251 (2) 0.81921 (11) 0.69992 (12) 0.0232 (3)
O3 0.8870 (2) 0.93252 (12) 0.43301 (12) 0.0248 (3)
H3 0.813 (3) 0.968 (2) 0.4896 (15) 0.033 (7)*
N1 0.4700 (2) 1.03357 (13) 0.71084 (13) 0.0155 (3)
N2 0.6016 (2) 0.96863 (13) 0.62100 (13) 0.0164 (3)
C1 −0.0334 (3) 0.92182 (17) 0.79696 (17) 0.0219 (4)
H1A −0.1400 0.9331 0.8683 0.033*
H1B −0.0255 0.8436 0.7680 0.033*
H1C −0.0663 0.9803 0.7397 0.033*
C2 0.3785 (3) 0.85984 (17) 0.96219 (17) 0.0235 (4)
H2A 0.2742 0.8657 1.0347 0.035*
H2B 0.4913 0.8991 0.9691 0.035*
H2C 0.4299 0.7775 0.9445 0.035*
C3 0.2252 (3) 1.20273 (15) 0.89032 (16) 0.0168 (3)
C4 0.1378 (3) 1.29089 (16) 0.97140 (16) 0.0196 (4)
H4 0.0274 1.2775 1.0335 0.023*
C5 0.2091 (3) 1.39631 (16) 0.96262 (16) 0.0195 (4)
H5 0.1520 1.4533 1.0201 0.023*
C6 0.3645 (3) 1.41882 (15) 0.86956 (16) 0.0188 (4)
C7 0.4554 (3) 1.33520 (16) 0.78900 (16) 0.0179 (4)
H7 0.5623 1.3514 0.7260 0.021*
C8 0.3901 (3) 1.22474 (15) 0.79955 (15) 0.0158 (3)
C9 0.4990 (3) 1.14094 (15) 0.71396 (15) 0.0160 (3)
H9 0.6020 1.1665 0.6539 0.019*
C10 0.5659 (3) 0.86010 (15) 0.62363 (15) 0.0162 (3)
C11 0.6967 (3) 0.78165 (15) 0.53296 (15) 0.0154 (3)
C12 0.8488 (3) 0.82057 (15) 0.44149 (16) 0.0173 (3)
C13 0.9604 (3) 0.74493 (16) 0.35706 (15) 0.0178 (4)
H13 1.0587 0.7723 0.2955 0.021*
C14 0.9313 (3) 0.62645 (16) 0.36032 (15) 0.0164 (3)
C15 1.0449 (3) 0.54640 (16) 0.27417 (15) 0.0188 (4)
H15 1.1414 0.5723 0.2107 0.023*
C16 1.0161 (3) 0.43211 (17) 0.28209 (16) 0.0206 (4)
H16 1.0941 0.3794 0.2243 0.025*
C17 0.8725 (3) 0.39148 (16) 0.37463 (17) 0.0208 (4)
H17 0.8534 0.3120 0.3787 0.025*
C18 0.7606 (3) 0.46675 (16) 0.45860 (16) 0.0181 (4)
H18 0.6647 0.4390 0.5212 0.022*
C19 0.7861 (3) 0.58623 (15) 0.45330 (15) 0.0161 (3)
C20 0.6700 (3) 0.66597 (15) 0.53765 (15) 0.0159 (3)
H20 0.5708 0.6395 0.5993 0.019*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Sn1 0.01565 (7) 0.01387 (7) 0.01579 (7) −0.00315 (4) −0.00023 (5) −0.00126 (4)
Cl1 0.0265 (2) 0.0153 (2) 0.0333 (3) −0.00562 (17) −0.0009 (2) −0.00611 (18)
O1 0.0212 (7) 0.0156 (6) 0.0240 (7) −0.0042 (5) 0.0037 (5) −0.0026 (5)
O2 0.0250 (7) 0.0166 (7) 0.0237 (7) −0.0071 (5) 0.0057 (6) −0.0045 (5)
O3 0.0301 (8) 0.0177 (7) 0.0224 (7) −0.0094 (6) 0.0066 (6) −0.0051 (5)
N1 0.0150 (7) 0.0161 (7) 0.0144 (7) −0.0019 (6) −0.0017 (6) −0.0022 (6)
N2 0.0166 (7) 0.0159 (7) 0.0150 (7) −0.0024 (6) 0.0001 (6) −0.0035 (6)
C1 0.0196 (9) 0.0252 (10) 0.0209 (9) −0.0074 (7) −0.0026 (7) 0.0010 (7)
C2 0.0263 (10) 0.0207 (9) 0.0238 (10) −0.0013 (8) −0.0079 (8) −0.0008 (7)
C3 0.0166 (8) 0.0149 (8) 0.0190 (9) −0.0012 (6) −0.0050 (7) −0.0004 (7)
C4 0.0189 (9) 0.0195 (9) 0.0174 (9) −0.0003 (7) −0.0005 (7) −0.0009 (7)
C5 0.0200 (9) 0.0166 (9) 0.0205 (9) 0.0032 (7) −0.0052 (7) −0.0045 (7)
C6 0.0214 (9) 0.0130 (8) 0.0229 (9) −0.0027 (7) −0.0067 (7) −0.0019 (7)
C7 0.0167 (8) 0.0184 (9) 0.0184 (9) −0.0032 (7) −0.0033 (7) −0.0006 (7)
C8 0.0170 (8) 0.0140 (8) 0.0163 (8) −0.0006 (6) −0.0048 (7) −0.0017 (6)
C9 0.0158 (8) 0.0160 (8) 0.0159 (8) −0.0032 (6) −0.0027 (7) 0.0003 (6)
C10 0.0161 (8) 0.0169 (9) 0.0155 (8) −0.0025 (7) −0.0032 (7) −0.0008 (7)
C11 0.0143 (8) 0.0162 (8) 0.0157 (8) −0.0018 (6) −0.0037 (7) −0.0021 (6)
C12 0.0192 (9) 0.0155 (8) 0.0177 (9) −0.0041 (7) −0.0044 (7) 0.0000 (7)
C13 0.0168 (8) 0.0208 (9) 0.0150 (8) −0.0048 (7) −0.0010 (7) −0.0003 (7)
C14 0.0149 (8) 0.0200 (9) 0.0150 (8) −0.0015 (7) −0.0051 (7) −0.0027 (7)
C15 0.0181 (9) 0.0228 (9) 0.0145 (9) −0.0018 (7) −0.0022 (7) −0.0029 (7)
C16 0.0215 (9) 0.0214 (9) 0.0187 (9) −0.0002 (7) −0.0048 (7) −0.0069 (7)
C17 0.0213 (9) 0.0161 (9) 0.0260 (10) −0.0026 (7) −0.0072 (8) −0.0030 (7)
C18 0.0168 (8) 0.0184 (9) 0.0191 (9) −0.0028 (7) −0.0042 (7) −0.0011 (7)
C19 0.0149 (8) 0.0174 (9) 0.0166 (8) −0.0017 (7) −0.0049 (7) −0.0024 (7)
C20 0.0148 (8) 0.0169 (9) 0.0149 (8) −0.0028 (6) −0.0014 (7) −0.0015 (6)

Geometric parameters (Å, °)

Sn1—O1 2.091 (1) C5—H5 0.9500
Sn1—O2 2.146 (1) C6—C7 1.371 (2)
Sn1—N1 2.190 (2) C7—C8 1.416 (2)
Sn1—C1 2.107 (2) C7—H7 0.9500
Sn1—C2 2.113 (2) C8—C9 1.436 (2)
Cl1—C6 1.745 (2) C9—H9 0.9500
O1—C3 1.324 (2) C10—C11 1.479 (2)
O2—C10 1.291 (2) C11—C20 1.382 (2)
O3—C12 1.362 (2) C11—C12 1.427 (2)
O3—H3 0.828 (10) C12—C13 1.374 (2)
N1—C9 1.299 (2) C13—C14 1.420 (3)
N1—N2 1.393 (2) C13—H13 0.9500
N2—C10 1.320 (2) C14—C19 1.417 (3)
C1—H1A 0.9800 C14—C15 1.421 (2)
C1—H1B 0.9800 C15—C16 1.369 (3)
C1—H1C 0.9800 C15—H15 0.9500
C2—H2A 0.9800 C16—C17 1.409 (3)
C2—H2B 0.9800 C16—H16 0.9500
C2—H2C 0.9800 C17—C18 1.368 (3)
C3—C8 1.411 (3) C17—H17 0.9500
C3—C4 1.408 (2) C18—C19 1.423 (3)
C4—C5 1.380 (3) C18—H18 0.9500
C4—H4 0.9500 C19—C20 1.410 (2)
C5—C6 1.389 (3) C20—H20 0.9500
O1—Sn1—C1 95.03 (7) C6—C7—H7 120.0
O1—Sn1—C2 97.04 (7) C8—C7—H7 120.0
C1—Sn1—C2 127.30 (8) C3—C8—C7 119.79 (16)
O1—Sn1—O2 155.22 (5) C3—C8—C9 123.84 (16)
C1—Sn1—O2 94.59 (7) C7—C8—C9 116.37 (16)
C2—Sn1—O2 95.16 (7) N1—C9—C8 126.20 (16)
O1—Sn1—N1 82.77 (5) N1—C9—H9 116.9
C1—Sn1—N1 122.40 (7) C8—C9—H9 116.9
C2—Sn1—N1 109.96 (7) O2—C10—N2 124.04 (16)
O2—Sn1—N1 72.80 (5) O2—C10—C11 118.68 (15)
C3—O1—Sn1 133.18 (12) N2—C10—C11 117.28 (16)
C10—O2—Sn1 115.30 (11) C20—C11—C12 118.99 (16)
C12—O3—H3 108.0 (18) C20—C11—C10 118.33 (16)
C9—N1—N2 114.99 (15) C12—C11—C10 122.69 (16)
C9—N1—Sn1 129.10 (12) O3—C12—C13 117.62 (16)
N2—N1—Sn1 115.88 (11) O3—C12—C11 122.19 (16)
C10—N2—N1 111.96 (14) C13—C12—C11 120.18 (16)
Sn1—C1—H1A 109.5 C12—C13—C14 121.08 (17)
Sn1—C1—H1B 109.5 C12—C13—H13 119.5
H1A—C1—H1B 109.5 C14—C13—H13 119.5
Sn1—C1—H1C 109.5 C19—C14—C15 118.84 (16)
H1A—C1—H1C 109.5 C19—C14—C13 118.96 (16)
H1B—C1—H1C 109.5 C15—C14—C13 122.20 (17)
Sn1—C2—H2A 109.5 C16—C15—C14 120.38 (17)
Sn1—C2—H2B 109.5 C16—C15—H15 119.8
H2A—C2—H2B 109.5 C14—C15—H15 119.8
Sn1—C2—H2C 109.5 C15—C16—C17 121.04 (17)
H2A—C2—H2C 109.5 C15—C16—H16 119.5
H2B—C2—H2C 109.5 C17—C16—H16 119.5
O1—C3—C8 123.74 (16) C18—C17—C16 119.80 (17)
O1—C3—C4 118.25 (16) C18—C17—H17 120.1
C8—C3—C4 118.00 (16) C16—C17—H17 120.1
C5—C4—C3 121.42 (17) C17—C18—C19 120.79 (17)
C5—C4—H4 119.3 C17—C18—H18 119.6
C3—C4—H4 119.3 C19—C18—H18 119.6
C4—C5—C6 119.82 (17) C20—C19—C14 119.00 (16)
C4—C5—H5 120.1 C20—C19—C18 121.86 (17)
C6—C5—H5 120.1 C14—C19—C18 119.14 (16)
C7—C6—C5 120.72 (17) C11—C20—C19 121.72 (17)
C7—C6—Cl1 120.41 (15) C11—C20—H20 119.1
C5—C6—Cl1 118.83 (14) C19—C20—H20 119.1
C6—C7—C8 120.09 (17)
C1—Sn1—O1—C3 −134.26 (17) Sn1—N1—C9—C8 0.8 (3)
C2—Sn1—O1—C3 97.15 (17) C3—C8—C9—N1 −3.8 (3)
O2—Sn1—O1—C3 −21.8 (2) C7—C8—C9—N1 176.64 (17)
N1—Sn1—O1—C3 −12.18 (16) Sn1—O2—C10—N2 −1.3 (2)
O1—Sn1—O2—C10 11.1 (2) Sn1—O2—C10—C11 178.74 (12)
C1—Sn1—O2—C10 123.65 (14) N1—N2—C10—O2 0.4 (2)
C2—Sn1—O2—C10 −108.21 (14) N1—N2—C10—C11 −179.60 (14)
N1—Sn1—O2—C10 1.11 (12) O2—C10—C11—C20 −3.6 (2)
O1—Sn1—N1—C9 5.00 (15) N2—C10—C11—C20 176.39 (16)
C1—Sn1—N1—C9 96.39 (16) O2—C10—C11—C12 176.49 (17)
C2—Sn1—N1—C9 −89.90 (16) N2—C10—C11—C12 −3.5 (3)
O2—Sn1—N1—C9 −179.19 (17) C20—C11—C12—O3 −178.33 (17)
O1—Sn1—N1—N2 −176.74 (12) C10—C11—C12—O3 1.6 (3)
C1—Sn1—N1—N2 −85.36 (13) C20—C11—C12—C13 2.7 (3)
C2—Sn1—N1—N2 88.36 (12) C10—C11—C12—C13 −177.41 (16)
O2—Sn1—N1—N2 −0.93 (11) O3—C12—C13—C14 179.31 (16)
C9—N1—N2—C10 179.15 (15) C11—C12—C13—C14 −1.7 (3)
Sn1—N1—N2—C10 0.64 (18) C12—C13—C14—C19 −0.8 (3)
Sn1—O1—C3—C8 13.4 (3) C12—C13—C14—C15 −179.92 (17)
Sn1—O1—C3—C4 −166.82 (13) C19—C14—C15—C16 −0.9 (3)
O1—C3—C4—C5 −179.32 (17) C13—C14—C15—C16 178.26 (17)
C8—C3—C4—C5 0.5 (3) C14—C15—C16—C17 0.7 (3)
C3—C4—C5—C6 2.8 (3) C15—C16—C17—C18 −0.5 (3)
C4—C5—C6—C7 −3.3 (3) C16—C17—C18—C19 0.5 (3)
C4—C5—C6—Cl1 174.59 (14) C15—C14—C19—C20 −178.65 (16)
C5—C6—C7—C8 0.5 (3) C13—C14—C19—C20 2.2 (2)
Cl1—C6—C7—C8 −177.37 (14) C15—C14—C19—C18 0.9 (2)
O1—C3—C8—C7 176.52 (17) C13—C14—C19—C18 −178.24 (16)
C4—C3—C8—C7 −3.3 (3) C17—C18—C19—C20 178.81 (17)
O1—C3—C8—C9 −3.0 (3) C17—C18—C19—C14 −0.8 (3)
C4—C3—C8—C9 177.20 (16) C12—C11—C20—C19 −1.3 (3)
C6—C7—C8—C3 2.9 (3) C10—C11—C20—C19 178.82 (15)
C6—C7—C8—C9 −177.61 (16) C14—C19—C20—C11 −1.1 (3)
N2—N1—C9—C8 −177.52 (16) C18—C19—C20—C11 179.27 (17)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O3—H3···N2 0.83 (1) 1.86 (2) 2.604 (2) 148 (2)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: TK2476).

References

  1. Barbour, L. J. (2001). J. Supramol. Chem.1, 189–191.
  2. Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Labib, L., Khalil, T. E., Iskander, M. F. & Refaat, L. S. (1996). Polyhedron, 21, 3697–3707.
  4. Samanta, B., Chakraborty, J., Dey, D. K. & Mitra, S. (2007). Struct. Chem.18, 287–297.
  5. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Westrip, S. P. (2009). publCIF In preparation.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809022259/tk2476sup1.cif

e-65-0m816-sup1.cif (20.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022259/tk2476Isup2.hkl

e-65-0m816-Isup2.hkl (204.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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