Abstract
In the title compound, {[Zn(C10H8N2)(H2O)4](C8H4O4)}n, the ZnII atoms, lying on a twofold rotation axis, are bridged by 4,4′-bipyridine ligands, resulting in a linear chain along the b axis. In the chain, the ZnII atom adopts a slightly distorted octahedral coordination geometry involving four water molecules at the equatorial positions. The noncoordinated benzene-1,4-dicarboxylate anion, which is also located on a twofold rotation axis, bridges adjacent chains through O—H⋯O hydrogen bonds, forming a three-dimensional supramolecular network.
Related literature
For background information on hydrothermal reactions, see: Yaghi et al. (2003 ▶). For hydrogen-bond graph-set motifs, see: Bernstein et al. (1995 ▶).
Experimental
Crystal data
[Zn(C10H8N2)(H2O)4](C8H4O4)
M r = 457.75
Monoclinic,
a = 6.9861 (12) Å
b = 11.3436 (19) Å
c = 11.3219 (19) Å
β = 101.209 (3)°
V = 880.1 (3) Å3
Z = 2
Mo Kα radiation
μ = 1.45 mm−1
T = 186 K
0.21 × 0.18 × 0.12 mm
Data collection
Bruker APEX CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.751, T max = 0.845
4812 measured reflections
1735 independent reflections
1465 reflections with I > 2σ(I)
R int = 0.035
Refinement
R[F 2 > 2σ(F 2)] = 0.042
wR(F 2) = 0.108
S = 1.08
1735 reflections
136 parameters
H-atom parameters constrained
Δρmax = 0.64 e Å−3
Δρmin = −0.27 e Å−3
Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT-Plus (Bruker, 2003 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809019412/is2415sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809019412/is2415Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H1AA⋯O3i | 0.87 | 1.89 | 2.753 (3) | 169 |
| O1—H1AB⋯O4ii | 0.86 | 2.08 | 2.893 (3) | 157 |
| O2—H2AA⋯O4iii | 0.85 | 1.87 | 2.718 (3) | 173 |
| O2—H2AB⋯O3iv | 0.84 | 1.91 | 2.742 (3) | 171 |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
.
Acknowledgments
This work was supported by the Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, People’s Republic of China.
supplementary crystallographic information
Comment
Hydro(solvo)thermal reaction has shown a kind of promising technique for the preparation of complexes with novel structures and special properties (Yaghi et al., 2003). Here we report the structure of the title compound, (I), which contains one-dimensional cation chains and non-coordinated benzene-1,4-dicarboxylate as couteranions under solvothermal condition.
Compound, (I), as shown in Fig. 1, consists of one-dimensional [Zn(C10H8N2)(H2O)4]n cation chains and benzene-1,4-dicarboxylate anions. The Zn(II) atoms are in a slightly distorted octahedral geometry, where two N atoms from two 4,4'-bipyridine ligands occupy the axial positions, and the equatorial positions are completed by four water molecules. The compound crystallizes in a centrosymmetric space group, which defines twofold axes along both the one-dimensional chains and the benzene-1,4-dicarboxylate anions.
In the crystal structure, intermolecular O—H···O hydrogen bonds are present (Table 1 and Fig. 2) and the coordinated water molecules are linked with two benzene-1,4-dicarboxylate anions to form R44(12) and R64(16) hydrogen-bonding rings (Bernstein et al., 1995). In addition, there are strong π···π interactions between pyridine rings and phenyl rings at (x, y, z) and (1/2 - x,1 + y, 3/2 - z), with the shortest atom-to-center distance of 3.322 (4) Å. The two kinds of interactions lead to a three-dimensional supramolecular network (Fig. 2).
Experimental
Compound (I) was solvothermally prepared from a reaction mixture of Zn(BF4)2 (0.2 mmol), 4,4'-bipyridine (0.1 mmol), benzene-1,4-dicarboxylic acid (0.1 mmol), methanol (3 ml) and distilled water (8 ml) in a molar ratio of 2:1:740:4444; the pH value was adjusted to 4.8 with trimethylamine and acetic acid. The mixture was stirred for 20 min at room temperature and then sealed in a Teflon-lined stainless steel autoclave with a 23 ml capacity at 423 K for 72 h. After cooling to room temperature, colourless block-shaped crystals were obtained; these were washed with deionized water, filtered, and dried in air (yield 48% based on Zn).
Refinement
C-bound H atoms were placed geometrically (C—H = 0.93 Å) and were refined using a riding model, with Uiso(H) = 1.2Ueq(C). H atoms on the water molecules were located in a difference Fourier map and the positions were fixed, with Uiso(H) = 1.2Ueq(O).
Figures
Fig. 1.
The structure of (I), showing the atomic numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.
Fig. 2.
View of the three-dimensional supramolecular structure in (I). Dashed lines indicate hydrogen bonds.
Crystal data
| [Zn(C10H8N2)(H2O)4](C8H4O4) | F(000) = 472 |
| Mr = 457.75 | Dx = 1.727 Mg m−3 |
| Monoclinic, P2/n | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2yac | Cell parameters from 1213 reflections |
| a = 6.9861 (12) Å | θ = 2.3–24.8° |
| b = 11.3436 (19) Å | µ = 1.45 mm−1 |
| c = 11.3219 (19) Å | T = 186 K |
| β = 101.209 (3)° | Block, colorless |
| V = 880.1 (3) Å3 | 0.21 × 0.18 × 0.12 mm |
| Z = 2 |
Data collection
| Bruker APEX CCD area-detector diffractometer | 1735 independent reflections |
| Radiation source: fine-focus sealed tube | 1465 reflections with I > 2σ(I) |
| graphite | Rint = 0.035 |
| φ and ω scans | θmax = 26.0°, θmin = 1.8° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→4 |
| Tmin = 0.751, Tmax = 0.845 | k = −14→12 |
| 4812 measured reflections | l = −12→13 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.108 | H-atom parameters constrained |
| S = 1.08 | w = 1/[σ2(Fo2) + (0.0572P)2 + 0.2035P] where P = (Fo2 + 2Fc2)/3 |
| 1735 reflections | (Δ/σ)max = 0.001 |
| 136 parameters | Δρmax = 0.64 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Zn1 | 0.7500 | 0.60167 (4) | 0.7500 | 0.0231 (2) | |
| N1 | 0.7500 | 0.7908 (3) | 0.7500 | 0.0219 (8) | |
| N2 | 0.7500 | 1.4169 (3) | 0.7500 | 0.0233 (8) | |
| O1 | 0.8792 (3) | 0.61311 (19) | 0.59227 (19) | 0.0310 (6) | |
| H1AA | 0.8253 | 0.6201 | 0.5164 | 0.037* | |
| H1AB | 0.9941 | 0.6430 | 0.6054 | 0.037* | |
| O2 | 1.0343 (3) | 0.59315 (16) | 0.8530 (2) | 0.0272 (5) | |
| H2AA | 1.1223 | 0.6455 | 0.8544 | 0.033* | |
| H2AB | 1.1024 | 0.5339 | 0.8452 | 0.033* | |
| O3 | 0.2410 (4) | 0.38845 (18) | 0.8474 (2) | 0.0329 (6) | |
| O4 | 0.2079 (3) | −0.22784 (18) | 0.64951 (18) | 0.0285 (5) | |
| C1 | 0.8163 (4) | 0.8531 (3) | 0.8503 (3) | 0.0231 (7) | |
| H1A | 0.8638 | 0.8121 | 0.9211 | 0.028* | |
| C2 | 0.8179 (4) | 0.9744 (3) | 0.8544 (3) | 0.0227 (7) | |
| H2A | 0.8642 | 1.0131 | 0.9267 | 0.027* | |
| C3 | 0.7500 | 1.0391 (4) | 0.7500 | 0.0192 (9) | |
| C4 | 0.7500 | 1.1695 (3) | 0.7500 | 0.0177 (9) | |
| C5 | 0.7615 (5) | 1.2339 (3) | 0.8561 (3) | 0.0223 (7) | |
| H5 | 0.7694 | 1.1949 | 0.9292 | 0.027* | |
| C6 | 0.7612 (5) | 1.3551 (3) | 0.8525 (3) | 0.0255 (7) | |
| H6 | 0.7691 | 1.3963 | 0.9243 | 0.031* | |
| C7 | 0.2500 | 0.3377 (4) | 0.7500 | 0.0245 (10) | |
| C8 | 0.2500 | 0.2043 (4) | 0.7500 | 0.0201 (9) | |
| C9 | 0.1895 (4) | 0.1414 (3) | 0.6432 (3) | 0.0225 (7) | |
| H9 | 0.1501 | 0.1818 | 0.5711 | 0.027* | |
| C10 | 0.1878 (4) | 0.0195 (3) | 0.6440 (3) | 0.0225 (7) | |
| H10 | 0.1442 | −0.0210 | 0.5724 | 0.027* | |
| C11 | 0.2500 | −0.0438 (4) | 0.7500 | 0.0200 (9) | |
| C12 | 0.2500 | −0.1761 (4) | 0.7500 | 0.0244 (10) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Zn1 | 0.0313 (4) | 0.0149 (3) | 0.0225 (3) | 0.000 | 0.0040 (2) | 0.000 |
| N1 | 0.027 (2) | 0.0174 (18) | 0.0222 (19) | 0.000 | 0.0068 (15) | 0.000 |
| N2 | 0.028 (2) | 0.0169 (18) | 0.0242 (19) | 0.000 | 0.0038 (16) | 0.000 |
| O1 | 0.0362 (14) | 0.0349 (13) | 0.0221 (12) | −0.0073 (10) | 0.0066 (10) | −0.0017 (9) |
| O2 | 0.0287 (13) | 0.0174 (11) | 0.0339 (13) | −0.0010 (9) | 0.0017 (10) | −0.0001 (9) |
| O3 | 0.0464 (16) | 0.0256 (12) | 0.0253 (13) | 0.0101 (10) | 0.0036 (11) | −0.0026 (9) |
| O4 | 0.0399 (14) | 0.0217 (12) | 0.0236 (12) | 0.0017 (10) | 0.0057 (10) | −0.0039 (9) |
| C1 | 0.0257 (18) | 0.0225 (15) | 0.0208 (15) | 0.0014 (13) | 0.0037 (13) | 0.0027 (12) |
| C2 | 0.0265 (19) | 0.0234 (16) | 0.0179 (16) | −0.0005 (13) | 0.0034 (13) | −0.0030 (12) |
| C3 | 0.018 (2) | 0.019 (2) | 0.023 (2) | 0.000 | 0.0075 (18) | 0.000 |
| C4 | 0.012 (2) | 0.018 (2) | 0.023 (2) | 0.000 | 0.0030 (17) | 0.000 |
| C5 | 0.0253 (17) | 0.0227 (16) | 0.0186 (15) | −0.0007 (13) | 0.0032 (13) | 0.0014 (12) |
| C6 | 0.033 (2) | 0.0228 (15) | 0.0202 (16) | −0.0001 (14) | 0.0046 (14) | −0.0012 (12) |
| C7 | 0.025 (3) | 0.022 (2) | 0.024 (2) | 0.000 | −0.0009 (19) | 0.000 |
| C8 | 0.017 (2) | 0.021 (2) | 0.023 (2) | 0.000 | 0.0079 (18) | 0.000 |
| C9 | 0.0266 (19) | 0.0230 (15) | 0.0181 (15) | 0.0028 (13) | 0.0047 (13) | 0.0030 (12) |
| C10 | 0.0215 (18) | 0.0267 (16) | 0.0195 (16) | 0.0009 (13) | 0.0040 (13) | −0.0017 (12) |
| C11 | 0.018 (2) | 0.020 (2) | 0.023 (2) | 0.000 | 0.0089 (18) | 0.000 |
| C12 | 0.023 (2) | 0.022 (2) | 0.029 (2) | 0.000 | 0.006 (2) | 0.000 |
Geometric parameters (Å, °)
| Zn1—N2i | 2.096 (3) | C3—C2ii | 1.394 (3) |
| Zn1—O2ii | 2.101 (2) | C3—C4 | 1.479 (6) |
| Zn1—O2 | 2.101 (2) | C4—C5 | 1.395 (3) |
| Zn1—N1 | 2.145 (3) | C4—C5ii | 1.395 (3) |
| Zn1—O1 | 2.156 (2) | C5—C6 | 1.376 (4) |
| Zn1—O1ii | 2.156 (2) | C5—H5 | 0.9300 |
| N1—C1 | 1.342 (3) | C6—H6 | 0.9300 |
| N2—C6 | 1.344 (3) | C7—O3iii | 1.256 (3) |
| O1—H1AA | 0.8719 | C7—C8 | 1.513 (6) |
| O1—H1AB | 0.8571 | C8—C9 | 1.397 (3) |
| O2—H2AA | 0.8525 | C8—C9iii | 1.397 (3) |
| O2—H2AB | 0.8379 | C9—C10 | 1.383 (4) |
| O3—C7 | 1.256 (3) | C9—H9 | 0.9300 |
| O4—C12 | 1.263 (3) | C10—C11 | 1.394 (3) |
| C1—C2 | 1.377 (4) | C10—H10 | 0.9300 |
| C1—H1A | 0.9300 | C11—C10iii | 1.394 (4) |
| C2—C3 | 1.394 (3) | C11—C12 | 1.500 (6) |
| C2—H2A | 0.9300 | C12—O4iii | 1.263 (3) |
| N2i—Zn1—O2ii | 87.36 (5) | C3—C2—H2A | 120.0 |
| N2i—Zn1—O2 | 87.36 (5) | C2ii—C3—C2 | 116.4 (4) |
| O2ii—Zn1—O2 | 174.73 (10) | C2ii—C3—C4 | 121.79 (19) |
| N2i—Zn1—N1 | 180.000 (1) | C2—C3—C4 | 121.79 (19) |
| O2ii—Zn1—N1 | 92.64 (5) | C5—C4—C5ii | 116.8 (4) |
| O2—Zn1—N1 | 92.64 (5) | C5—C4—C3 | 121.58 (18) |
| N2i—Zn1—O1 | 93.45 (6) | C5ii—C4—C3 | 121.58 (18) |
| O2ii—Zn1—O1 | 92.63 (9) | C6—C5—C4 | 119.9 (3) |
| O2—Zn1—O1 | 87.69 (9) | C6—C5—H5 | 120.1 |
| N1—Zn1—O1 | 86.55 (6) | C4—C5—H5 | 120.1 |
| N2i—Zn1—O1ii | 93.45 (6) | N2—C6—C5 | 123.1 (3) |
| O2ii—Zn1—O1ii | 87.69 (9) | N2—C6—H6 | 118.4 |
| O2—Zn1—O1ii | 92.63 (9) | C5—C6—H6 | 118.4 |
| N1—Zn1—O1ii | 86.55 (6) | O3—C7—O3iii | 125.5 (4) |
| O1—Zn1—O1ii | 173.10 (12) | O3—C7—C8 | 117.3 (2) |
| C1—N1—C1ii | 116.4 (4) | O3iii—C7—C8 | 117.3 (2) |
| C1—N1—Zn1 | 121.81 (18) | C9—C8—C9iii | 118.5 (4) |
| C1ii—N1—Zn1 | 121.81 (18) | C9—C8—C7 | 120.73 (19) |
| C6ii—N2—C6 | 117.2 (4) | C9iii—C8—C7 | 120.73 (19) |
| C6ii—N2—Zn1iv | 121.42 (18) | C10—C9—C8 | 120.5 (3) |
| C6—N2—Zn1iv | 121.42 (18) | C10—C9—H9 | 119.8 |
| Zn1—O1—H1AA | 130.6 | C8—C9—H9 | 119.8 |
| Zn1—O1—H1AB | 114.1 | C9—C10—C11 | 121.3 (3) |
| H1AA—O1—H1AB | 110.2 | C9—C10—H10 | 119.4 |
| Zn1—O2—H2AA | 125.3 | C11—C10—H10 | 119.4 |
| Zn1—O2—H2AB | 118.2 | C10iii—C11—C10 | 117.9 (4) |
| H2AA—O2—H2AB | 98.0 | C10iii—C11—C12 | 121.03 (19) |
| N1—C1—C2 | 123.7 (3) | C10—C11—C12 | 121.03 (19) |
| N1—C1—H1A | 118.2 | O4—C12—O4iii | 124.6 (4) |
| C2—C1—H1A | 118.2 | O4—C12—C11 | 117.7 (2) |
| C1—C2—C3 | 119.9 (3) | O4iii—C12—C11 | 117.7 (2) |
| C1—C2—H2A | 120.0 |
Symmetry codes: (i) x, y−1, z; (ii) −x+3/2, y, −z+3/2; (iii) −x+1/2, y, −z+3/2; (iv) x, y+1, z.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1AA···O3v | 0.87 | 1.89 | 2.753 (3) | 169 |
| O1—H1AB···O4vi | 0.86 | 2.08 | 2.893 (3) | 157 |
| O2—H2AA···O4vii | 0.85 | 1.87 | 2.718 (3) | 173 |
| O2—H2AB···O3viii | 0.84 | 1.91 | 2.742 (3) | 171 |
Symmetry codes: (v) x+1/2, −y+1, z−1/2; (vi) x+1, y+1, z; (vii) −x+3/2, y+1, −z+3/2; (viii) x+1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS2415).
References
- Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl.34, 1555–1573.
- Bruker (1998). SMART Bruker AXS Inc., Madison, Wisconsin, USA.
- Bruker (2003). SAINT-Plus Bruker AXS Inc., Madison, Wisconsin, USA.
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Yaghi, O. M., O’Keeffe, M., Ockwig, N. W., Chae, H. K., Eddaoudi, M. & Kim, J. (2003). Nature (London), 423, 705–714. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809019412/is2415sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809019412/is2415Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


