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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Jun 27;65(Pt 7):o1694. doi: 10.1107/S1600536809023666

5-(4-Fluoro­phen­yl)-2,2,6-trimethyl-4H-1,3-dioxin-4-one

Julio Zukerman-Schpector a,*, Adriano S Vieira b, Hélio A Stefani b, Edward R T Tiekink a
PMCID: PMC2969376  PMID: 21582949

Abstract

The 1,3-dioxine ring in the title compound, C13H13FO3, is in a half-boat conformation with the methyl-bonded C atom 0.612 (2) Å out of the plane defined by the remaining five atoms.

Related literature

For synthetic and structural background, see: Caracelli et al. (2007); Stefani et al. (2007); Vieira et al. (2008). For conformational analysis, see: Cremer & Pople (1975); Iulek & Zukerman-Schpector (1997).graphic file with name e-65-o1694-scheme1.jpg

Experimental

Crystal data

  • C13H13FO3

  • M r = 236.23

  • Monoclinic, Inline graphic

  • a = 11.865 (3) Å

  • b = 7.781 (2) Å

  • c = 12.780 (4) Å

  • β = 107.369 (5)°

  • V = 1126.1 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.11 mm−1

  • T = 98 K

  • 0.20 × 0.15 × 0.08 mm

Data collection

  • Rigaku AFC12/SATURN724 diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995) T min = 0.977, T max = 1 (expected range = 0.969–0.991)

  • 4071 measured reflections

  • 2058 independent reflections

  • 1895 reflections with I > 2σ(I)

  • R int = 0.058

Refinement

  • R[F 2 > 2σ(F 2)] = 0.052

  • wR(F 2) = 0.150

  • S = 1.15

  • 2058 reflections

  • 157 parameters

  • H-atom parameters constrained

  • Δρmax = 0.32 e Å−3

  • Δρmin = −0.25 e Å−3

Data collection: CrystalClear (Rigaku/MSC 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: WinGX (Farrugia, 1999).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809023666/ng2601sup1.cif

e-65-o1694-sup1.cif (16.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809023666/ng2601Isup2.hkl

e-65-o1694-Isup2.hkl (99.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

We thank FAPESP (07/59404–2 to HAS, 08/02531–5 to JZ-S and 06/50190-7 to ASV), CNPq (300613/2007 to HAS and 307121/2006–0 to JZ-S) and CAPES for financial support.

supplementary crystallographic information

Comment

As part of our on-going research interest efforts exploring the chemistry of potassium organotrifluoroborate salts including their potential use as intermediates in organic synthesis (Caracelli et al., 2007; Stefani et al., 2007; Vieira et al. 2008), herein the crystal structure of (I) is described. The molecular structure, Fig. 1, shows the six-membered ring to adopt a half-boat conformation with the C2 atom being 0.612 (2) Å out of the plane defined by the remaining five atoms. The ring-puckering parameters being q2 = 0.415 (2) Å, q3 = 0.189 (1) Å, Q = 0.456 (1) Å, and φ2 = 53.3 (2)°. The aryl ring is twisted with respect to the planar portion of the dioxin-4-one ring, as seen in the C4—C5—C7—C8 tosion angle of 55.8 (2)°.

Experimental

Single crystals of (I) were obtained by slow evaporation from methanol.

Refinement

The H atoms were positioned with idealized geometry using a riding model with C—H = 0.93–0.96 Å, and with Uiso set to 1.2 times (1.5 for methyl) Ueq(parent atom).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) showing atom labelling scheme and displacement ellipsoids at the 50% probability level (arbitrary spheres for the H atoms).

Crystal data

C13H13FO3 F(000) = 496
Mr = 236.23 Dx = 1.393 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 2836 reflections
a = 11.865 (3) Å θ = 2.8–40.2°
b = 7.781 (2) Å µ = 0.11 mm1
c = 12.780 (4) Å T = 98 K
β = 107.369 (5)° Prism, colourless
V = 1126.1 (5) Å3 0.20 × 0.15 × 0.08 mm
Z = 4

Data collection

Rigaku AFC12/SATURN724 diffractometer 2058 independent reflections
Radiation source: fine-focus sealed tube 1895 reflections with I > 2σ(I)
graphite Rint = 0.058
ω scans θmax = 25.5°, θmin = 3.2°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) h = −14→11
Tmin = 0.977, Tmax = 1 k = −6→9
4071 measured reflections l = −10→15

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.150 H-atom parameters constrained
S = 1.15 w = 1/[σ2(Fo2) + (0.0872P)2 + 0.1727P] where P = (Fo2 + 2Fc2)/3
2058 reflections (Δ/σ)max < 0.001
157 parameters Δρmax = 0.32 e Å3
0 restraints Δρmin = −0.25 e Å3

Special details

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C2 0.63242 (13) −0.0457 (2) 0.70282 (12) 0.0194 (4)
C4 0.70622 (13) −0.1569 (2) 0.56052 (13) 0.0193 (4)
C5 0.71736 (13) 0.0244 (2) 0.53203 (12) 0.0186 (4)
C6 0.65075 (13) 0.1421 (2) 0.56386 (12) 0.0184 (4)
C7 0.79551 (13) 0.0670 (2) 0.46347 (12) 0.0192 (4)
C8 0.77995 (14) −0.0091 (2) 0.36116 (13) 0.0208 (4)
H8 0.7177 −0.0854 0.3339 0.025*
C9 0.85535 (14) 0.0266 (2) 0.29960 (13) 0.0237 (4)
H9 0.8447 −0.0247 0.2316 0.028*
C10 0.94636 (15) 0.1401 (2) 0.34182 (14) 0.0244 (4)
C11 0.96583 (14) 0.2194 (2) 0.44186 (14) 0.0240 (4)
H11 1.0281 0.2960 0.4679 0.029*
C12 0.88968 (14) 0.1817 (2) 0.50293 (13) 0.0216 (4)
H12 0.9014 0.2333 0.5710 0.026*
C13 0.53730 (14) −0.0969 (2) 0.75301 (13) 0.0229 (4)
H13A 0.5194 −0.0014 0.7929 0.034*
H13B 0.5644 −0.1918 0.8021 0.034*
H13C 0.4676 −0.1301 0.6960 0.034*
C14 0.74870 (14) −0.0007 (2) 0.78687 (13) 0.0224 (4)
H14A 0.8081 0.0157 0.7507 0.034*
H14B 0.7720 −0.0924 0.8391 0.034*
H14C 0.7397 0.1033 0.8241 0.034*
C15 0.63020 (15) 0.3252 (2) 0.52936 (13) 0.0220 (4)
H15A 0.6699 0.3502 0.4758 0.033*
H15B 0.6605 0.3984 0.5920 0.033*
H15C 0.5470 0.3450 0.4982 0.033*
O1 0.58727 (9) 0.09857 (15) 0.63304 (9) 0.0209 (3)
O3 0.64762 (9) −0.18821 (14) 0.63603 (9) 0.0198 (3)
O4 0.73951 (10) −0.27917 (15) 0.51946 (9) 0.0251 (3)
F 1.02109 (9) 0.17542 (15) 0.28148 (9) 0.0337 (3)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C2 0.0239 (8) 0.0180 (8) 0.0181 (8) 0.0005 (6) 0.0090 (6) 0.0009 (6)
C4 0.0173 (8) 0.0235 (8) 0.0169 (7) −0.0010 (6) 0.0046 (6) −0.0016 (6)
C5 0.0192 (7) 0.0209 (8) 0.0152 (8) −0.0004 (6) 0.0042 (6) 0.0001 (6)
C6 0.0175 (8) 0.0226 (8) 0.0153 (8) −0.0019 (6) 0.0049 (6) −0.0002 (6)
C7 0.0194 (8) 0.0195 (8) 0.0182 (8) 0.0042 (6) 0.0048 (6) 0.0034 (6)
C8 0.0215 (8) 0.0197 (8) 0.0208 (8) 0.0021 (6) 0.0056 (6) 0.0005 (6)
C9 0.0266 (8) 0.0280 (9) 0.0175 (8) 0.0073 (7) 0.0083 (6) 0.0031 (7)
C10 0.0211 (8) 0.0305 (9) 0.0246 (9) 0.0076 (6) 0.0115 (7) 0.0092 (7)
C11 0.0190 (8) 0.0264 (8) 0.0257 (9) −0.0003 (6) 0.0051 (6) 0.0043 (7)
C12 0.0211 (8) 0.0242 (8) 0.0188 (8) 0.0021 (6) 0.0050 (6) 0.0019 (6)
C13 0.0231 (8) 0.0257 (9) 0.0222 (8) −0.0009 (6) 0.0104 (7) 0.0022 (7)
C14 0.0253 (8) 0.0252 (9) 0.0181 (8) −0.0027 (6) 0.0085 (6) −0.0005 (6)
C15 0.0257 (8) 0.0210 (8) 0.0212 (8) 0.0017 (6) 0.0098 (6) 0.0010 (6)
O1 0.0231 (6) 0.0218 (6) 0.0205 (6) 0.0022 (5) 0.0106 (5) 0.0030 (5)
O3 0.0237 (6) 0.0181 (6) 0.0192 (6) −0.0014 (4) 0.0090 (5) −0.0014 (5)
O4 0.0313 (7) 0.0208 (6) 0.0265 (7) 0.0005 (5) 0.0140 (5) −0.0027 (5)
F 0.0276 (6) 0.0474 (7) 0.0327 (6) 0.0013 (5) 0.0191 (5) 0.0079 (5)

Geometric parameters (Å, °)

C2—O1 1.4345 (19) C9—H9 0.9300
C2—O3 1.4429 (19) C10—F 1.3655 (19)
C2—C13 1.509 (2) C10—C11 1.375 (3)
C2—C14 1.515 (2) C11—C12 1.390 (2)
C4—O4 1.2081 (19) C11—H11 0.9300
C4—O3 1.3691 (18) C12—H12 0.9300
C4—C5 1.473 (2) C13—H13A 0.9600
C5—C6 1.349 (2) C13—H13B 0.9600
C5—C7 1.491 (2) C13—H13C 0.9600
C6—O1 1.3643 (18) C14—H14A 0.9600
C6—C15 1.490 (2) C14—H14B 0.9600
C7—C8 1.397 (2) C14—H14C 0.9600
C7—C12 1.401 (2) C15—H15A 0.9600
C8—C9 1.385 (2) C15—H15B 0.9600
C8—H8 0.9300 C15—H15C 0.9600
C9—C10 1.374 (3)
O1—C2—O3 108.85 (12) C10—C11—C12 118.05 (16)
O1—C2—C13 106.44 (12) C10—C11—H11 121.0
O3—C2—C13 106.87 (12) C12—C11—H11 121.0
O1—C2—C14 110.59 (13) C11—C12—C7 120.97 (15)
O3—C2—C14 110.43 (12) C11—C12—H12 119.5
C13—C2—C14 113.46 (13) C7—C12—H12 119.5
O4—C4—O3 117.84 (14) C2—C13—H13A 109.5
O4—C4—C5 125.57 (15) C2—C13—H13B 109.5
O3—C4—C5 116.51 (14) H13A—C13—H13B 109.5
C6—C5—C4 118.14 (14) C2—C13—H13C 109.5
C6—C5—C7 123.34 (15) H13A—C13—H13C 109.5
C4—C5—C7 118.39 (14) H13B—C13—H13C 109.5
C5—C6—O1 120.89 (14) C2—C14—H14A 109.5
C5—C6—C15 128.21 (15) C2—C14—H14B 109.5
O1—C6—C15 110.85 (13) H14A—C14—H14B 109.5
C8—C7—C12 118.39 (14) C2—C14—H14C 109.5
C8—C7—C5 121.63 (14) H14A—C14—H14C 109.5
C12—C7—C5 119.94 (14) H14B—C14—H14C 109.5
C9—C8—C7 121.29 (15) C6—C15—H15A 109.5
C9—C8—H8 119.4 C6—C15—H15B 109.5
C7—C8—H8 119.4 H15A—C15—H15B 109.5
C10—C9—C8 118.12 (15) C6—C15—H15C 109.5
C10—C9—H9 120.9 H15A—C15—H15C 109.5
C8—C9—H9 120.9 H15B—C15—H15C 109.5
F—C10—C9 118.29 (16) C6—O1—C2 114.91 (12)
F—C10—C11 118.53 (15) C4—O3—C2 117.38 (12)
C9—C10—C11 123.18 (15)
O4—C4—C5—C6 163.49 (15) C8—C9—C10—C11 0.0 (3)
O3—C4—C5—C6 −13.0 (2) F—C10—C11—C12 −179.58 (14)
O4—C4—C5—C7 −12.6 (2) C9—C10—C11—C12 0.3 (3)
O3—C4—C5—C7 170.94 (12) C10—C11—C12—C7 −0.3 (2)
C4—C5—C6—O1 8.8 (2) C8—C7—C12—C11 0.2 (2)
C7—C5—C6—O1 −175.29 (13) C5—C7—C12—C11 178.08 (14)
C4—C5—C6—C15 −168.39 (15) C5—C6—O1—C2 25.3 (2)
C7—C5—C6—C15 7.5 (3) C15—C6—O1—C2 −157.02 (13)
C6—C5—C7—C8 −120.06 (18) O3—C2—O1—C6 −52.77 (16)
C4—C5—C7—C8 55.8 (2) C13—C2—O1—C6 −167.62 (12)
C6—C5—C7—C12 62.1 (2) C14—C2—O1—C6 68.72 (16)
C4—C5—C7—C12 −122.05 (16) O4—C4—O3—C2 165.97 (14)
C12—C7—C8—C9 0.1 (2) C5—C4—O3—C2 −17.28 (18)
C5—C7—C8—C9 −177.78 (14) O1—C2—O3—C4 48.96 (16)
C7—C8—C9—C10 −0.2 (2) C13—C2—O3—C4 163.53 (12)
C8—C9—C10—F 179.84 (14) C14—C2—O3—C4 −72.62 (16)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: NG2601).

References

  1. Altomare, A., Burla, M. C., Camalli, M., Cascarano, G. L., Giacovazzo, C., Guagliardi, A., Moliterni, A. G. G., Polidori, G. & Spagna, R. (1999). J. Appl. Cryst.32, 115–119.
  2. Brandenburg, K. (2006). DIAMOND Crystal Impact GbR, Bonn, Germany.
  3. Caracelli, I., Stefani, H. A., Vieira, A. S., Machado, M. M. P. & Zukerman-Schpector, J. (2007). Z. Kristallogr. New Cryst. Struct.222, 345–346.
  4. Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc.97, 1354–1358.
  5. Farrugia, L. J. (1999). J. Appl. Cryst.32, 837–838.
  6. Higashi, T. (1995). ABSCOR Rigaku Corporation, Tokyo, Japan.
  7. Iulek, J. & Zukerman-Schpector, J. (1997). Quim. Nova, 20, 433–434.
  8. Rigaku/MSC (2005). CrystalClear Rigaku/MSC Inc., The Woodlands, Texas, USA.
  9. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  10. Stefani, H. A., Cella, R. & Vieira, A. S. (2007). Tetrahedron, 63, 3623–3658.
  11. Vieira, A. S., Fiorante, P. F., Zukerman-Schpector, J., Alves, D., Botteselle, G. V. & Stefani, H. A. (2008). Tetrahedron, 64, 7234–7241.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809023666/ng2601sup1.cif

e-65-o1694-sup1.cif (16.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809023666/ng2601Isup2.hkl

e-65-o1694-Isup2.hkl (99.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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