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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Jun 13;65(Pt 7):m774. doi: 10.1107/S1600536809022144

Bis(thio­semicarbazide)nickel(II) bis­[2-(thio­semicarbazonometh­yl)benzene­sulfonate] dihydrate

Wei Zhang a, Yuan-Tao Chen a,*
PMCID: PMC2969405  PMID: 21582704

Abstract

In the title compound, [Ni(CH5N3S)2](C8H8N3O3S2)2·2H2O, the NiII atom lies on a inversion centre and is four-coordinated by two N and two S atoms of two thio­semicarbazide ligands in an almost square-planar coordination. In the crystal structure, the molecules are linked into a three-dimensional network via C—H⋯O, C—H⋯N, N—H⋯O, N—H⋯S and O—H⋯O hydrogen bonds.

Related literature

For the design and synthesis of organic–inorganic hybrid materials and their potential practical applications, see: Hagrman et al. (1998); Ranford et al. (1998). graphic file with name e-65-0m774-scheme1.jpg

Experimental

Crystal data

  • [Ni(CH5N3S)2](C8H8N3O3S2)2·2H2O

  • M r = 793.61

  • Triclinic, Inline graphic

  • a = 7.3853 (8) Å

  • b = 9.9043 (11) Å

  • c = 11.3140 (18) Å

  • α = 86.670 (2)°

  • β = 77.611 (1)°

  • γ = 75.177 (1)°

  • V = 781.40 (17) Å3

  • Z = 1

  • Mo Kα radiation

  • μ = 1.09 mm−1

  • T = 298 K

  • 0.33 × 0.21 × 0.13 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.716, T max = 0.872

  • 4091 measured reflections

  • 2717 independent reflections

  • 2268 reflections with I > 2σ(I)

  • R int = 0.014

Refinement

  • R[F 2 > 2σ(F 2)] = 0.029

  • wR(F 2) = 0.078

  • S = 1.03

  • 2717 reflections

  • 205 parameters

  • H-atom parameters constrained

  • Δρmax = 0.30 e Å−3

  • Δρmin = −0.25 e Å−3

Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809022144/at2808sup1.cif

e-65-0m774-sup1.cif (19KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022144/at2808Isup2.hkl

e-65-0m774-Isup2.hkl (133.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected geometric parameters (Å, °).

Ni1—N5 1.903 (2)
Ni1—S3 2.1788 (7)
N5i—Ni1—N5 180
N5i—Ni1—S3 91.59 (6)
N5—Ni1—S3 88.41 (6)

Symmetry code: (i) Inline graphic.

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯S2ii 0.86 2.73 3.475 (2) 147
N3—H3A⋯N2 0.86 2.29 2.643 (3) 105
N3—H3A⋯O4iii 0.86 2.58 3.224 (3) 132
N4—H4⋯O4iii 0.86 1.97 2.794 (3) 160
O4—H4C⋯O2 0.85 1.97 2.819 (3) 172
O4—H4D⋯O3iv 0.85 2.19 3.036 (3) 172
O4—H4D⋯O4v 0.85 2.58 2.903 (3) 104
N5—H5A⋯O2vi 0.90 1.97 2.837 (3) 163
N5—H5B⋯O1iii 0.90 2.23 2.893 (3) 130
N6—H6A⋯O3vii 0.86 2.03 2.866 (3) 165
N6—H6B⋯S2viii 0.86 2.50 3.298 (2) 156
C2—H2⋯O1 0.93 2.50 3.066 (3) 119
C5—H5⋯O2 0.93 2.38 2.811 (3) 108
C8—H8⋯N2 0.93 2.48 2.790 (4) 100

Symmetry codes: (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic; (v) Inline graphic; (vi) Inline graphic; (vii) Inline graphic; (viii) Inline graphic.

Acknowledgments

The authors thank the Program for New Century Excellent Talents in Universities for a research grant.

supplementary crystallographic information

Comment

The design and synthesis of organic/inorganic hybrid materials have attracted intense attention in recent years owing to their potential practical applications, such as antitumor, antidiabetic, antitubercular activities, magnetism and catalysis (Ranford, et al., 1998; Hagrman, et al., 1998). In order to achieve supramolecular transition metal complexes by self-assembly, and to explore the relationship between the structure and the biological properties, as one part of our systematic work, in this paper, we report on the synthesis and crystal structure of the title compound, (I).

As shown in Fig. 1, the NiII atom lies on a inversion centre and it is four-coordinate with two N donors and two S donors of two thiosemicarbazide ligands, and adopts distorted square coordination. The bond distances of Ni1—N5 (N5A) [1.903 (2) Å], Ni1—S3 (S3A) [2.1788 (7)Å] are consistent with the bond lengths reported previously. The bond distances of Ni1—N5 (N5A) are shorter than the Ni1—S3 (S3A), showing that the strength of Ni1—N5 (N5A) are stronger than the Ni1—S3(S3A) (Table 1). In the crystal packing, the molecules form a one-dimensional chain structure by the C—H···O, N—H···O, N—H···S and O—H···O hydrogen bonds (Table 2).

Experimental

The solution of 1.0 mmol 2-formyl-benzenesulfonate-thiosemicarbazide was added to a solution of 0.5 mmol Ni(NCS)2.4H2O in 5 ml ethanol at room temperature. The mixture was refluxed for 4 h with stirring, then the resulting precipitate was filtered, washed, and dried in vacuo over P4O10 for 48 h. Single crystals suitable for X-ray structural analysis was obtained by slowly evaporating from methanol at room temperature.

Refinement

All H atoms were placed geometrically and treated as riding on their parent atoms with O—H = 0.85 Å, C—H = 0.93 Å, N—H = 0.86-0.90 Å, and with Uiso(H) = 1.2 Ueq(C, N) or 1.5 Ueq(O).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) showing 30% displacement ellipsoids.

Crystal data

[Ni(CH5N3S)2](C8H8N3O3S2)2·2H2O Z = 1
Mr = 793.61 F(000) = 410
Triclinic, P1 Dx = 1.686 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 7.3853 (8) Å Cell parameters from 2430 reflections
b = 9.9043 (11) Å θ = 2.8–28.3°
c = 11.3140 (18) Å µ = 1.09 mm1
α = 86.670 (2)° T = 298 K
β = 77.611 (1)° Block, light green
γ = 75.177 (1)° 0.33 × 0.21 × 0.13 mm
V = 781.40 (17) Å3

Data collection

Bruker SMART CCD area-detector diffractometer 2717 independent reflections
Radiation source: fine-focus sealed tube 2268 reflections with I > 2σ(I)
graphite Rint = 0.014
φ and ω scans θmax = 25.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −8→6
Tmin = 0.716, Tmax = 0.872 k = −11→10
4091 measured reflections l = −13→13

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.078 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0372P)2 + 0.4266P] where P = (Fo2 + 2Fc2)/3
2717 reflections (Δ/σ)max < 0.001
205 parameters Δρmax = 0.30 e Å3
0 restraints Δρmin = −0.25 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Ni1 0.5000 0.0000 1.0000 0.02441 (13)
S1 0.34631 (9) 0.48280 (6) 0.21469 (5) 0.02605 (16)
S2 −0.17224 (10) 1.04164 (7) 0.68768 (6) 0.03721 (19)
S3 0.26167 (9) −0.01235 (7) 0.91972 (6) 0.03314 (17)
N1 0.0111 (3) 0.8006 (2) 0.58317 (19) 0.0340 (5)
H1 −0.0018 0.8437 0.5161 0.041*
N2 0.1084 (3) 0.6619 (2) 0.58171 (19) 0.0303 (5)
N3 −0.0510 (4) 0.7954 (2) 0.7884 (2) 0.0484 (7)
H3A 0.0034 0.7075 0.7846 0.058*
H3B −0.0972 0.8354 0.8577 0.058*
N4 0.2869 (3) 0.2479 (2) 0.9094 (2) 0.0334 (5)
H4 0.2478 0.3364 0.8989 0.040*
N5 0.4569 (3) 0.1917 (2) 0.95422 (19) 0.0290 (5)
H5A 0.4527 0.2420 1.0189 0.035*
H5B 0.5575 0.2025 0.8969 0.035*
N6 0.0401 (3) 0.2105 (2) 0.8361 (2) 0.0408 (6)
H6A 0.0047 0.2983 0.8208 0.049*
H6B −0.0232 0.1547 0.8197 0.049*
O1 0.4008 (3) 0.61284 (18) 0.21793 (16) 0.0365 (4)
O2 0.4767 (3) 0.38730 (18) 0.12150 (15) 0.0338 (4)
O3 0.1474 (3) 0.50454 (19) 0.20417 (17) 0.0375 (5)
O4 0.8292 (3) 0.46182 (19) 0.06672 (18) 0.0421 (5)
H4C 0.7240 0.4388 0.0908 0.051*
H4D 0.8465 0.4734 −0.0095 0.051*
C1 −0.0636 (4) 0.8689 (3) 0.6882 (2) 0.0302 (6)
C2 0.1743 (4) 0.6065 (3) 0.4783 (2) 0.0317 (6)
H2 0.1525 0.6586 0.4094 0.038*
C3 0.2855 (3) 0.4598 (3) 0.4667 (2) 0.0270 (5)
C4 0.3691 (3) 0.3944 (2) 0.3547 (2) 0.0251 (5)
C5 0.4773 (4) 0.2568 (3) 0.3488 (2) 0.0345 (6)
H5 0.5331 0.2144 0.2740 0.041*
C6 0.5023 (4) 0.1825 (3) 0.4542 (3) 0.0399 (7)
H6 0.5753 0.0906 0.4501 0.048*
C7 0.4188 (4) 0.2450 (3) 0.5650 (3) 0.0421 (7)
H7 0.4347 0.1947 0.6357 0.051*
C8 0.3117 (4) 0.3820 (3) 0.5717 (2) 0.0362 (6)
H8 0.2563 0.4231 0.6470 0.043*
C9 0.1903 (4) 0.1618 (3) 0.8844 (2) 0.0277 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Ni1 0.0261 (2) 0.0197 (2) 0.0281 (3) −0.00600 (18) −0.00623 (18) −0.00112 (18)
S1 0.0318 (3) 0.0230 (3) 0.0241 (3) −0.0083 (3) −0.0059 (3) 0.0011 (2)
S2 0.0469 (4) 0.0278 (4) 0.0327 (4) −0.0011 (3) −0.0082 (3) −0.0037 (3)
S3 0.0340 (4) 0.0228 (3) 0.0468 (4) −0.0076 (3) −0.0168 (3) 0.0003 (3)
N1 0.0434 (13) 0.0259 (12) 0.0269 (12) −0.0008 (10) −0.0041 (10) −0.0013 (9)
N2 0.0330 (12) 0.0240 (11) 0.0307 (12) −0.0052 (9) −0.0015 (9) −0.0023 (9)
N3 0.0765 (19) 0.0295 (13) 0.0277 (13) −0.0020 (12) 0.0002 (12) 0.0000 (10)
N4 0.0385 (13) 0.0198 (11) 0.0445 (13) −0.0046 (9) −0.0188 (11) 0.0049 (9)
N5 0.0340 (12) 0.0276 (11) 0.0288 (11) −0.0116 (9) −0.0093 (9) 0.0012 (9)
N6 0.0429 (14) 0.0279 (12) 0.0567 (16) −0.0054 (10) −0.0258 (12) 0.0017 (11)
O1 0.0544 (12) 0.0267 (10) 0.0301 (10) −0.0180 (9) −0.0033 (9) 0.0025 (8)
O2 0.0408 (11) 0.0333 (10) 0.0267 (9) −0.0107 (8) −0.0032 (8) −0.0040 (8)
O3 0.0351 (10) 0.0386 (11) 0.0395 (11) −0.0074 (8) −0.0133 (8) 0.0083 (9)
O4 0.0365 (11) 0.0407 (11) 0.0508 (12) −0.0116 (9) −0.0104 (9) 0.0009 (9)
C1 0.0329 (14) 0.0282 (14) 0.0292 (14) −0.0086 (11) −0.0039 (11) −0.0020 (11)
C2 0.0365 (15) 0.0286 (14) 0.0281 (14) −0.0054 (11) −0.0067 (11) 0.0027 (11)
C3 0.0283 (13) 0.0273 (13) 0.0268 (13) −0.0091 (10) −0.0061 (10) 0.0018 (10)
C4 0.0261 (12) 0.0230 (13) 0.0275 (13) −0.0077 (10) −0.0075 (10) 0.0035 (10)
C5 0.0387 (15) 0.0277 (14) 0.0340 (15) −0.0036 (12) −0.0060 (12) −0.0008 (11)
C6 0.0433 (16) 0.0236 (14) 0.0476 (18) 0.0003 (12) −0.0104 (13) 0.0077 (12)
C7 0.0465 (17) 0.0413 (17) 0.0355 (16) −0.0059 (14) −0.0112 (13) 0.0119 (13)
C8 0.0419 (16) 0.0369 (16) 0.0256 (14) −0.0058 (12) −0.0038 (12) 0.0023 (11)
C9 0.0310 (14) 0.0263 (13) 0.0245 (13) −0.0055 (11) −0.0046 (11) −0.0026 (10)

Geometric parameters (Å, °)

Ni1—N5i 1.903 (2) N5—H5A 0.9000
Ni1—N5 1.903 (2) N5—H5B 0.9000
Ni1—S3i 2.1788 (7) N6—C9 1.310 (3)
Ni1—S3 2.1788 (7) N6—H6A 0.8600
S1—O1 1.4487 (18) N6—H6B 0.8600
S1—O3 1.4590 (19) O4—H4C 0.8500
S1—O2 1.4655 (18) O4—H4D 0.8500
S1—C4 1.784 (2) C2—C3 1.472 (3)
S2—C1 1.694 (3) C2—H2 0.9300
S3—C9 1.720 (2) C3—C8 1.400 (4)
N1—C1 1.340 (3) C3—C4 1.400 (3)
N1—N2 1.377 (3) C4—C5 1.390 (3)
N1—H1 0.8600 C5—C6 1.385 (4)
N2—C2 1.265 (3) C5—H5 0.9300
N3—C1 1.319 (3) C6—C7 1.378 (4)
N3—H3A 0.8600 C6—H6 0.9300
N3—H3B 0.8600 C7—C8 1.382 (4)
N4—C9 1.320 (3) C7—H7 0.9300
N4—N5 1.423 (3) C8—H8 0.9300
N4—H4 0.8600
N5i—Ni1—N5 180.000 (1) C9—N6—H6B 120.0
N5i—Ni1—S3i 88.41 (6) H6A—N6—H6B 120.0
N5—Ni1—S3i 91.59 (6) H4C—O4—H4D 108.2
N5i—Ni1—S3 91.59 (6) N3—C1—N1 117.1 (2)
N5—Ni1—S3 88.41 (6) N3—C1—S2 123.0 (2)
S3i—Ni1—S3 180.000 (1) N1—C1—S2 119.80 (19)
O1—S1—O3 112.53 (11) N2—C2—C3 120.2 (2)
O1—S1—O2 112.54 (11) N2—C2—H2 119.9
O3—S1—O2 111.48 (11) C3—C2—H2 119.9
O1—S1—C4 107.61 (11) C8—C3—C4 118.1 (2)
O3—S1—C4 107.07 (11) C8—C3—C2 119.0 (2)
O2—S1—C4 105.09 (11) C4—C3—C2 123.0 (2)
C9—S3—Ni1 97.45 (9) C5—C4—C3 120.6 (2)
C1—N1—N2 120.6 (2) C5—C4—S1 117.17 (19)
C1—N1—H1 119.7 C3—C4—S1 122.23 (18)
N2—N1—H1 119.7 C6—C5—C4 120.1 (2)
C2—N2—N1 116.0 (2) C6—C5—H5 119.9
C1—N3—H3A 120.0 C4—C5—H5 119.9
C1—N3—H3B 120.0 C7—C6—C5 119.9 (2)
H3A—N3—H3B 120.0 C7—C6—H6 120.0
C9—N4—N5 118.9 (2) C5—C6—H6 120.0
C9—N4—H4 120.6 C6—C7—C8 120.3 (3)
N5—N4—H4 120.6 C6—C7—H7 119.8
N4—N5—Ni1 115.48 (15) C8—C7—H7 119.8
N4—N5—H5A 108.4 C7—C8—C3 120.9 (3)
Ni1—N5—H5A 108.4 C7—C8—H8 119.5
N4—N5—H5B 108.4 C3—C8—H8 119.5
Ni1—N5—H5B 108.4 N6—C9—N4 119.8 (2)
H5A—N5—H5B 107.5 N6—C9—S3 121.3 (2)
C9—N6—H6A 120.0 N4—C9—S3 118.86 (19)
N5i—Ni1—S3—C9 174.91 (10) O3—S1—C4—C5 111.1 (2)
N5—Ni1—S3—C9 −5.09 (10) O2—S1—C4—C5 −7.5 (2)
C1—N1—N2—C2 −179.7 (2) O1—S1—C4—C3 51.3 (2)
C9—N4—N5—Ni1 −10.8 (3) O3—S1—C4—C3 −69.9 (2)
S3i—Ni1—N5—N4 −171.05 (16) O2—S1—C4—C3 171.4 (2)
S3—Ni1—N5—N4 8.95 (16) C3—C4—C5—C6 0.5 (4)
N2—N1—C1—N3 −4.5 (4) S1—C4—C5—C6 179.4 (2)
N2—N1—C1—S2 176.70 (18) C4—C5—C6—C7 0.3 (4)
N1—N2—C2—C3 178.2 (2) C5—C6—C7—C8 −0.6 (5)
N2—C2—C3—C8 1.9 (4) C6—C7—C8—C3 0.1 (4)
N2—C2—C3—C4 −177.2 (2) C4—C3—C8—C7 0.7 (4)
C8—C3—C4—C5 −1.0 (4) C2—C3—C8—C7 −178.4 (3)
C2—C3—C4—C5 178.1 (2) N5—N4—C9—N6 −175.8 (2)
C8—C3—C4—S1 −179.8 (2) N5—N4—C9—S3 5.8 (3)
C2—C3—C4—S1 −0.8 (3) Ni1—S3—C9—N6 −177.3 (2)
O1—S1—C4—C5 −127.7 (2) Ni1—S3—C9—N4 1.0 (2)

Symmetry codes: (i) −x+1, −y, −z+2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1···S2ii 0.86 2.73 3.475 (2) 147
N3—H3A···N2 0.86 2.29 2.643 (3) 105
N3—H3A···O4iii 0.86 2.58 3.224 (3) 132
N4—H4···O4iii 0.86 1.97 2.794 (3) 160
O4—H4C···O2 0.85 1.97 2.819 (3) 172
O4—H4D···O3iv 0.85 2.19 3.036 (3) 172
O4—H4D···O4v 0.85 2.58 2.903 (3) 104
N5—H5A···O2vi 0.90 1.97 2.837 (3) 163
N5—H5B···O1iii 0.90 2.23 2.893 (3) 130
N6—H6A···O3vii 0.86 2.03 2.866 (3) 165
N6—H6B···S2viii 0.86 2.50 3.298 (2) 156
C2—H2···O1 0.93 2.50 3.066 (3) 119
C5—H5···O2 0.93 2.38 2.811 (3) 108
C8—H8···N2 0.93 2.48 2.790 (4) 100

Symmetry codes: (ii) −x, −y+2, −z+1; (iii) −x+1, −y+1, −z+1; (iv) −x+1, −y+1, −z; (v) −x+2, −y+1, −z; (vi) x, y, z+1; (vii) −x, −y+1, −z+1; (viii) x, y−1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: AT2808).

References

  1. Bruker (2000). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Hagrman, D., Hammond, R. P. & Haushalter, R. (1998). Chem. Mater.10, 2091–2096.
  3. Ranford, J. D., Vittal, J. J. & Wang, Y. M. (1998). Inorg. Chem.37, 1226–1231. [DOI] [PubMed]
  4. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809022144/at2808sup1.cif

e-65-0m774-sup1.cif (19KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022144/at2808Isup2.hkl

e-65-0m774-Isup2.hkl (133.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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