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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 May 23;65(Pt 6):o1373. doi: 10.1107/S1600536809018947

N′-(2,4-Dimethoxy­benzyl­idene)-3,4,5-trihydroxy­benzohydrazide ethanol solvate

Abeer A Alhadi a, Siti Munirah Saharin a, Hapipah Mohd Ali a,*, Ward T Robinson a, Mahmood A Abdulla b
PMCID: PMC2969598  PMID: 21583222

Abstract

The title compound, C16H16N2O6·C2H5OH, was synthesized from 3,4,5-trihydroxy­benzoyl­hydrazide and 2,4-dimethoxy­benzaldehyde in ethanol. The compound is not planar, with the two aromatic planes of the two aromatic rings twisted by 15.6 (1)°. The hydr­oxy groups are involved in both intra­molecular O—H⋯O and inter­molecular O—H⋯N and O—H⋯O hydrogen bonds and a C—H⋯O interaction also occurs.

Related literature

For related compounds, see Abdul Alhadi et al. (2009). For the parent N′-(2-hydroxy­benzyl­idene)benzohydrazide, see Lyubchova et al. (1995).graphic file with name e-65-o1373-scheme1.jpg

Experimental

Crystal data

  • C16H16N2O6·C2H6O

  • M r = 378.38

  • Monoclinic, Inline graphic

  • a = 7.8347 (1) Å

  • b = 17.5412 (3) Å

  • c = 13.0230 (2) Å

  • β = 93.936 (1)°

  • V = 1785.53 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.11 mm−1

  • T = 100 K

  • 0.31 × 0.16 × 0.12 mm

Data collection

  • Bruker APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.967, T max = 0.987

  • 19580 measured reflections

  • 5188 independent reflections

  • 3586 reflections with I > 2σ(I)

  • R int = 0.041

Refinement

  • R[F 2 > 2σ(F 2)] = 0.044

  • wR(F 2) = 0.121

  • S = 1.02

  • 5188 reflections

  • 253 parameters

  • H-atom parameters constrained

  • Δρmax = 0.41 e Å−3

  • Δρmin = −0.27 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2008).

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809018947/hg2510sup1.cif

e-65-o1373-sup1.cif (18.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809018947/hg2510Isup2.hkl

e-65-o1373-Isup2.hkl (254.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2⋯O3 0.84 2.54 2.9325 (13) 109
O3—H3⋯O2 0.84 2.54 2.9325 (13) 110
O4—H4⋯O3 0.84 2.25 2.7009 (14) 114
N1—H1′⋯O7i 0.88 2.04 2.8844 (15) 160
O2—H2⋯O1ii 0.84 1.86 2.6871 (13) 170
O2—H2⋯N2ii 0.84 2.57 2.9293 (15) 107
O3—H3⋯O1ii 0.84 1.88 2.7200 (13) 177
O4—H4⋯O6iii 0.84 2.14 2.7366 (14) 127
C14—H14⋯O2iv 0.95 2.42 3.3539 (17) 167

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

The authors thank the University of Malaya for funding this study (Science Fund Grant 12-0-03-2031, 12-02-03-2051 and PJP FS350-2008)

supplementary crystallographic information

Experimental

A mixture of 3,4,5-trihydroxybenzoylhydrazide and 2,4-dimethoxybenzaldehyde were heated in ethanol (50 ml) for 12 h. The yellow crystals were obtained by recrystallization from ethanol.

Refinement

All H atoms were placed at calculated positions (C— H 0.95 - 0.99, N—H 0.88, and O—H 0.84 Å) with Uiso(H) set to 1.2 - 1.5times Ueq (C,N,O)

Figures

Fig. 1.

Fig. 1.

Thermal ellipsoid plot (Barbour, 2001) of C16H16N2O6.C2H5OH at 70% probability level. Hydrogen atoms are drawn as sphere of arbitrary radius.

Crystal data

C16H16N2O6·C2H6O F(000) = 800
Mr = 378.38 Dx = 1.408 Mg m3
Monoclinic, P21/n Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2yn Cell parameters from 3445 reflections
a = 7.8347 (1) Å θ = 2.8–29.1°
b = 17.5412 (3) Å µ = 0.11 mm1
c = 13.0230 (2) Å T = 100 K
β = 93.936 (1)° Block, yellow
V = 1785.53 (5) Å3 0.31 × 0.16 × 0.12 mm
Z = 4

Data collection

Bruker APEXII CCD area-detector diffractometer 5188 independent reflections
Radiation source: fine-focus sealed tube 3586 reflections with I > 2σ(I)
graphite Rint = 0.041
ω scans θmax = 30.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −11→10
Tmin = 0.967, Tmax = 0.987 k = −24→24
19580 measured reflections l = −18→18

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.121 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.0566P)2 + 0.3538P] where P = (Fo2 + 2Fc2)/3
5188 reflections (Δ/σ)max = 0.001
253 parameters Δρmax = 0.41 e Å3
0 restraints Δρmin = −0.26 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 1.15941 (17) 0.21466 (7) 0.76768 (10) 0.0156 (3)
H1 1.1458 0.2583 0.7248 0.019*
C2 1.25203 (17) 0.22016 (7) 0.86245 (10) 0.0153 (3)
C3 1.26837 (17) 0.15678 (8) 0.92716 (10) 0.0154 (3)
C4 1.19696 (18) 0.08744 (8) 0.89317 (10) 0.0170 (3)
C5 1.10756 (18) 0.08150 (8) 0.79830 (10) 0.0176 (3)
H5 1.0605 0.0339 0.7760 0.021*
C6 1.08672 (17) 0.14571 (7) 0.73529 (10) 0.0154 (3)
C7 0.98683 (17) 0.14395 (8) 0.63409 (10) 0.0159 (3)
C8 0.74521 (17) 0.00842 (8) 0.49550 (10) 0.0168 (3)
H8 0.7539 −0.0296 0.5476 0.023 (4)*
C9 0.64100 (17) −0.00596 (8) 0.40063 (10) 0.0165 (3)
C10 0.57036 (17) −0.07846 (8) 0.38154 (10) 0.0163 (3)
C11 0.47202 (17) −0.09404 (8) 0.29061 (10) 0.0172 (3)
H11 0.4236 −0.1431 0.2785 0.021*
C12 0.44633 (18) −0.03640 (8) 0.21828 (11) 0.0188 (3)
C13 0.51352 (19) 0.03637 (8) 0.23587 (11) 0.0209 (3)
H13 0.4939 0.0754 0.1859 0.025*
C14 0.60860 (18) 0.05093 (8) 0.32640 (11) 0.0190 (3)
H14 0.6533 0.1007 0.3389 0.023*
C15 0.2879 (2) −0.11915 (8) 0.09897 (11) 0.0227 (3)
H15A 0.3824 −0.1557 0.0978 0.034*
H15B 0.2270 −0.1169 0.0307 0.034*
H15C 0.2087 −0.1354 0.1498 0.034*
C16 0.5321 (2) −0.20516 (8) 0.44383 (12) 0.0247 (3)
H16A 0.4072 −0.2007 0.4358 0.037*
H16B 0.5647 −0.2364 0.5044 0.037*
H16C 0.5737 −0.2292 0.3824 0.037*
C17 0.7901 (2) 0.81507 (9) 0.72385 (14) 0.0313 (4)
H19A 0.6929 0.8370 0.6826 0.047*
H19B 0.7482 0.7866 0.7818 0.047*
H19C 0.8531 0.7806 0.6809 0.047*
C18 0.9073 (2) 0.87827 (9) 0.76416 (12) 0.0259 (3)
H18A 0.8458 0.9110 0.8113 0.031*
H18B 1.0074 0.8559 0.8038 0.031*
N1 0.92094 (15) 0.07647 (6) 0.60343 (9) 0.0168 (2)
H1' 0.9379 0.0357 0.6422 0.030 (5)*
N2 0.82556 (15) 0.07168 (6) 0.50974 (9) 0.0174 (2)
O1 0.96209 (13) 0.20261 (5) 0.58110 (7) 0.0219 (2)
O2 1.32670 (14) 0.28879 (5) 0.88620 (7) 0.0218 (2)
H2 1.3569 0.2901 0.9493 0.033*
O3 1.35316 (13) 0.15568 (6) 1.02261 (7) 0.0209 (2)
H3 1.3877 0.1998 1.0381 0.031*
O4 1.21299 (15) 0.02350 (6) 0.95174 (8) 0.0273 (3)
H4 1.2718 0.0332 1.0065 0.041*
O5 0.60584 (13) −0.13118 (6) 0.45673 (7) 0.0224 (2)
O6 0.35424 (14) −0.04532 (6) 0.12604 (8) 0.0264 (3)
O7 0.96498 (14) 0.92367 (6) 0.68270 (8) 0.0229 (2)
H7 1.0291 0.8975 0.6475 0.034*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0190 (6) 0.0138 (6) 0.0137 (6) 0.0025 (5) −0.0015 (5) 0.0010 (5)
C2 0.0187 (6) 0.0123 (6) 0.0148 (6) −0.0006 (5) 0.0000 (5) −0.0015 (5)
C3 0.0175 (6) 0.0163 (6) 0.0119 (6) 0.0006 (5) −0.0021 (5) −0.0010 (5)
C4 0.0214 (7) 0.0143 (6) 0.0147 (6) 0.0000 (5) −0.0029 (5) 0.0027 (5)
C5 0.0223 (7) 0.0140 (6) 0.0159 (7) −0.0007 (5) −0.0034 (5) −0.0003 (5)
C6 0.0171 (6) 0.0156 (6) 0.0131 (6) 0.0011 (5) −0.0020 (5) −0.0006 (5)
C7 0.0175 (6) 0.0157 (6) 0.0141 (6) 0.0019 (5) −0.0016 (5) −0.0005 (5)
C8 0.0194 (7) 0.0158 (6) 0.0148 (6) 0.0008 (5) −0.0021 (5) 0.0007 (5)
C9 0.0170 (6) 0.0168 (6) 0.0151 (7) −0.0002 (5) −0.0021 (5) −0.0009 (5)
C10 0.0187 (7) 0.0162 (6) 0.0139 (6) 0.0010 (5) −0.0010 (5) 0.0013 (5)
C11 0.0188 (7) 0.0162 (6) 0.0161 (6) −0.0014 (5) −0.0020 (5) −0.0015 (5)
C12 0.0201 (7) 0.0192 (7) 0.0162 (7) 0.0000 (5) −0.0059 (5) −0.0012 (5)
C13 0.0274 (8) 0.0156 (6) 0.0186 (7) −0.0001 (6) −0.0065 (6) 0.0026 (5)
C14 0.0208 (7) 0.0141 (6) 0.0212 (7) −0.0009 (5) −0.0040 (5) −0.0008 (5)
C15 0.0287 (8) 0.0186 (7) 0.0197 (7) −0.0034 (6) −0.0074 (6) −0.0025 (6)
C16 0.0339 (8) 0.0158 (7) 0.0236 (8) −0.0045 (6) −0.0042 (6) 0.0033 (6)
C17 0.0369 (9) 0.0197 (7) 0.0381 (10) −0.0044 (7) 0.0079 (7) −0.0009 (7)
C18 0.0344 (8) 0.0217 (7) 0.0212 (7) 0.0002 (6) −0.0020 (6) 0.0049 (6)
N1 0.0215 (6) 0.0151 (5) 0.0129 (5) −0.0010 (4) −0.0063 (4) 0.0013 (4)
N2 0.0199 (6) 0.0172 (6) 0.0142 (6) 0.0000 (5) −0.0064 (4) −0.0011 (4)
O1 0.0323 (6) 0.0142 (5) 0.0176 (5) 0.0012 (4) −0.0101 (4) 0.0016 (4)
O2 0.0353 (6) 0.0145 (5) 0.0145 (5) −0.0057 (4) −0.0070 (4) 0.0012 (4)
O3 0.0310 (6) 0.0167 (5) 0.0137 (5) −0.0028 (4) −0.0079 (4) 0.0011 (4)
O4 0.0446 (7) 0.0167 (5) 0.0184 (5) −0.0065 (5) −0.0141 (5) 0.0056 (4)
O5 0.0320 (6) 0.0162 (5) 0.0177 (5) −0.0042 (4) −0.0076 (4) 0.0030 (4)
O6 0.0382 (6) 0.0176 (5) 0.0209 (5) −0.0043 (4) −0.0160 (5) 0.0010 (4)
O7 0.0295 (6) 0.0163 (5) 0.0232 (6) 0.0001 (4) 0.0034 (4) −0.0001 (4)

Geometric parameters (Å, °)

C1—C6 1.3900 (18) C13—C14 1.3745 (19)
C1—C2 1.3914 (18) C13—H13 0.9500
C1—H1 0.9500 C14—H14 0.9500
C2—O2 1.3647 (15) C15—O6 1.4308 (16)
C2—C3 1.3958 (18) C15—H15A 0.9800
C3—O3 1.3687 (15) C15—H15B 0.9800
C3—C4 1.3979 (18) C15—H15C 0.9800
C4—O4 1.3574 (16) C16—O5 1.4258 (17)
C4—C5 1.3818 (18) C16—H16A 0.9800
C5—C6 1.3965 (18) C16—H16B 0.9800
C5—H5 0.9500 C16—H16C 0.9800
C6—C7 1.4862 (18) C17—C18 1.511 (2)
C7—O1 1.2466 (16) C17—H19A 0.9800
C7—N1 1.3412 (17) C17—H19B 0.9800
C8—N2 1.2830 (17) C17—H19C 0.9800
C8—C9 1.4554 (18) C18—O7 1.4247 (18)
C8—H8 0.9500 C18—H18A 0.9900
C9—C14 1.4004 (19) C18—H18B 0.9900
C9—C10 1.4023 (18) N1—N2 1.3889 (15)
C10—O5 1.3615 (16) N1—H1' 0.8800
C10—C11 1.3948 (18) O2—H2 0.8400
C11—C12 1.3869 (19) O3—H3 0.8400
C11—H11 0.9500 O4—H4 0.8400
C12—O6 1.3672 (16) O7—H7 0.8400
C12—C13 1.3938 (19)
C6—C1—C2 120.50 (12) C12—C13—H13 120.4
C6—C1—H1 119.8 C13—C14—C9 121.44 (13)
C2—C1—H1 119.8 C13—C14—H14 119.3
O2—C2—C1 116.85 (12) C9—C14—H14 119.3
O2—C2—C3 123.07 (11) O6—C15—H15A 109.5
C1—C2—C3 120.06 (12) O6—C15—H15B 109.5
O3—C3—C2 125.32 (12) H15A—C15—H15B 109.5
O3—C3—C4 115.73 (11) O6—C15—H15C 109.5
C2—C3—C4 118.93 (11) H15A—C15—H15C 109.5
O4—C4—C5 117.51 (12) H15B—C15—H15C 109.5
O4—C4—C3 121.43 (12) O5—C16—H16A 109.5
C5—C4—C3 121.07 (12) O5—C16—H16B 109.5
C4—C5—C6 119.75 (12) H16A—C16—H16B 109.5
C4—C5—H5 120.1 O5—C16—H16C 109.5
C6—C5—H5 120.1 H16A—C16—H16C 109.5
C1—C6—C5 119.63 (12) H16B—C16—H16C 109.5
C1—C6—C7 117.84 (11) C18—C17—H19A 109.5
C5—C6—C7 122.52 (12) C18—C17—H19B 109.5
O1—C7—N1 121.44 (12) H19A—C17—H19B 109.5
O1—C7—C6 121.75 (12) C18—C17—H19C 109.5
N1—C7—C6 116.79 (12) H19A—C17—H19C 109.5
N2—C8—C9 120.91 (12) H19B—C17—H19C 109.5
N2—C8—H8 119.5 O7—C18—C17 111.58 (13)
C9—C8—H8 119.5 O7—C18—H18A 109.3
C14—C9—C10 118.24 (12) C17—C18—H18A 109.3
C14—C9—C8 121.81 (12) O7—C18—H18B 109.3
C10—C9—C8 119.95 (12) C17—C18—H18B 109.3
O5—C10—C11 123.45 (12) H18A—C18—H18B 108.0
O5—C10—C9 115.45 (11) C7—N1—N2 119.19 (11)
C11—C10—C9 121.09 (12) C7—N1—H1' 120.4
C12—C11—C10 118.67 (12) N2—N1—H1' 120.4
C12—C11—H11 120.7 C8—N2—N1 114.10 (11)
C10—C11—H11 120.7 C2—O2—H2 109.5
O6—C12—C11 123.82 (12) C3—O3—H3 109.5
O6—C12—C13 114.82 (12) C4—O4—H4 109.5
C11—C12—C13 121.36 (12) C10—O5—C16 118.18 (11)
C14—C13—C12 119.17 (13) C12—O6—C15 118.75 (11)
C14—C13—H13 120.4 C18—O7—H7 109.5

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O2—H2···O3 0.84 2.54 2.9325 (13) 109
O3—H3···O2 0.84 2.54 2.9325 (13) 110
O4—H4···O3 0.84 2.25 2.7009 (14) 114
N1—H1'···O7i 0.88 2.04 2.8844 (15) 160
O2—H2···O1ii 0.84 1.86 2.6871 (13) 170
O2—H2···N2ii 0.84 2.57 2.9293 (15) 107
O3—H3···O1ii 0.84 1.88 2.7200 (13) 177
O4—H4···O6iii 0.84 2.14 2.7366 (14) 127
C14—H14···O2iv 0.95 2.42 3.3539 (17) 167

Symmetry codes: (i) x, y−1, z; (ii) x+1/2, −y+1/2, z+1/2; (iii) x+1, y, z+1; (iv) x−1/2, −y+1/2, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HG2510).

References

  1. Abdul Alhadi, A. A., Ali, H. M. & Ng, S. W. (2009). Acta Cryst. E65, o909. [DOI] [PMC free article] [PubMed]
  2. Barbour, L. J. (2001). J. Supramol. Chem.1, 189–191.
  3. Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Lyubchova, A., Cossé-Barbi, A., Doucet, J. P., Robert, F., Souron, J.-P. & Quarton, M. (1995). Acta Cryst. C51, 1893–1895.
  5. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Westrip, S. P. (2008). publCIF In preparation.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809018947/hg2510sup1.cif

e-65-o1373-sup1.cif (18.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809018947/hg2510Isup2.hkl

e-65-o1373-Isup2.hkl (254.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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