Abstract
In the molecule of the title compound, C12H16N2O4, an intramolecular N—H⋯O hydrogen bond results in the formation of a six-membered ring having an envelope conformation. In the crystal structure, a bifurcated intra/intermolecular N—H⋯(O,O) hydrogen bond generates inversion dimers.
Related literature
For bond-length data, see: Allen et al. (1987 ▶). For the synthesis, see: Ates-Alagoz & Buyukbingol (2001 ▶); Oezden et al. (2005 ▶).
Experimental
Crystal data
C12H16N2O4
M r = 252.27
Triclinic,
a = 4.4400 (9) Å
b = 12.606 (3) Å
c = 13.209 (3) Å
α = 61.710 (19)°
β = 83.02 (3)°
γ = 81.75 (3)°
V = 643.1 (3) Å3
Z = 2
Mo Kα radiation
μ = 0.10 mm−1
T = 294 K
0.20 × 0.10 × 0.10 mm
Data collection
Enraf–Nonius CAD-4 diffractometer
Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.981, T max = 0.990
2593 measured reflections
2281 independent reflections
924 reflections with I > 2σ(I)
R int = 0.083
3 standard reflections frequency: 120 min intensity decay: 1%
Refinement
R[F 2 > 2σ(F 2)] = 0.067
wR(F 2) = 0.165
S = 1.00
2281 reflections
157 parameters
H-atom parameters constrained
Δρmax = 0.19 e Å−3
Δρmin = −0.14 e Å−3
Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680901873X/hk2690sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S160053680901873X/hk2690Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N2—H2A⋯O4 | 0.86 | 2.02 | 2.635 (5) | 128 |
| N2—H2A⋯O4i | 0.86 | 2.55 | 3.324 (6) | 150 |
Symmetry code: (i)
.
Acknowledgments
The authors thank the Center of Testing and Analysis, Nanjing University, for support.
supplementary crystallographic information
Comment
Some derivatives of benzoic acid are important chemical materials. We report herein the crystal structure of the title compound.
In the molecule of the title compound (Fig 1), the bond lengths (Allen et al., 1987) and angles are within normal ranges. Ring A (C4-C9) is, of course, planar. Intramolecular N-H···O hydrogen bond (Table 1) results in the formation of a six-membered ring B (O4/N1/N2/C6/C7/H2A) having envelope conformation with atom O4 displaced by -0.116 (3) Å from the plane of the other ring atoms.
In the crystal structure, intra- and intermolecular N-H···O interactions (Table 1) link the molecules into centrosymmetric dimers (Fig. 2), in which they may be effective in the stabilization of the structure.
Experimental
For the preparation of the title compound, ethyl 4-chloro-3-nitrobenzoate (5.3 g, 23 mmol) was refluxed in n-propyl amine (25 ml) and tetrahydrofuran (50 ml) for 2 h. Then, solvents were evaporated and water was added to give yellow precipate, which was collected by filtration and washed with cold ethanol (2 × 15 ml) to afford the yellow solid (yield; 4.8 g). Crystals suitable for X-ray analysis were obtained by slow evaporation of an ethanol solution.
Refinement
H atoms were positioned geometrically, with N-H = 0.86 Å (for NH) and C-H = 0.93, 0.97 and 0.96 Å for aromatic, methylene and methyl H, respectively, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C,N), where x = 1.5 for methyl H and x = 1.2 for all other H atoms.
Figures
Fig. 1.
The molecular structure of the title molecule, with the atom-numbering scheme. Hydrogen bond is shown as dashed line.
Fig. 2.
A partial packing diagram of the title compound. Hydrogen bonds are shown as dashed lines.
Crystal data
| C12H16N2O4 | Z = 2 |
| Mr = 252.27 | F(000) = 268 |
| Triclinic, P1 | Dx = 1.303 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 4.4400 (9) Å | Cell parameters from 25 reflections |
| b = 12.606 (3) Å | θ = 9–11° |
| c = 13.209 (3) Å | µ = 0.10 mm−1 |
| α = 61.710 (19)° | T = 294 K |
| β = 83.02 (3)° | Block, colorless |
| γ = 81.75 (3)° | 0.20 × 0.10 × 0.10 mm |
| V = 643.1 (3) Å3 |
Data collection
| Enraf–Nonius CAD-4 diffractometer | 924 reflections with I > 2σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.083 |
| graphite | θmax = 25.2°, θmin = 1.8° |
| ω/2θ scans | h = 0→5 |
| Absorption correction: ψ scan (North et al., 1968) | k = −14→15 |
| Tmin = 0.981, Tmax = 0.990 | l = −15→15 |
| 2593 measured reflections | 3 standard reflections every 120 min |
| 2281 independent reflections | intensity decay: 1% |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.067 | H-atom parameters constrained |
| wR(F2) = 0.165 | w = 1/[σ2(Fo2) + (0.057P)2] where P = (Fo2 + 2Fc2)/3 |
| S = 1.00 | (Δ/σ)max < 0.001 |
| 2281 reflections | Δρmax = 0.19 e Å−3 |
| 157 parameters | Δρmin = −0.14 e Å−3 |
| Primary atom site location: structure-invariant direct methods |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | −0.3870 (7) | −0.0274 (2) | 0.8647 (2) | 0.0865 (10) | |
| O2 | −0.2837 (8) | −0.1310 (3) | 0.7632 (3) | 0.1130 (12) | |
| O3 | −0.0492 (8) | 0.3592 (2) | 0.7202 (2) | 0.1056 (12) | |
| O4 | 0.2630 (7) | 0.4310 (3) | 0.5801 (2) | 0.104 | |
| N1 | 0.1072 (8) | 0.3526 (3) | 0.6413 (3) | 0.0706 (10) | |
| N2 | 0.4396 (8) | 0.3293 (3) | 0.4457 (3) | 0.0842 (11) | |
| H2A | 0.4491 | 0.3936 | 0.4521 | 0.101* | |
| C1 | −0.3968 (13) | −0.2145 (4) | 1.0388 (4) | 0.127 (2) | |
| H1A | −0.5267 | −0.2746 | 1.0918 | 0.190* | |
| H1B | −0.3079 | −0.1811 | 1.0788 | 0.190* | |
| H1C | −0.2379 | −0.2511 | 1.0058 | 0.190* | |
| C2 | −0.5738 (10) | −0.1193 (4) | 0.9484 (4) | 0.1006 (16) | |
| H2B | −0.7339 | −0.0825 | 0.9819 | 0.121* | |
| H2C | −0.6696 | −0.1538 | 0.9100 | 0.121* | |
| C3 | −0.2502 (11) | −0.0448 (4) | 0.7781 (4) | 0.0809 (13) | |
| C4 | −0.0655 (9) | 0.0540 (3) | 0.6944 (3) | 0.0664 (11) | |
| C5 | −0.0537 (8) | 0.1582 (3) | 0.7019 (3) | 0.0592 (10) | |
| H5A | −0.1638 | 0.1678 | 0.7620 | 0.071* | |
| C6 | 0.1163 (8) | 0.2486 (3) | 0.6230 (3) | 0.0584 (10) | |
| C7 | 0.2859 (8) | 0.2413 (3) | 0.5268 (3) | 0.0588 (10) | |
| C8 | 0.2554 (10) | 0.1315 (4) | 0.5233 (3) | 0.0820 (13) | |
| H8A | 0.3503 | 0.1217 | 0.4612 | 0.098* | |
| C9 | 0.1030 (11) | 0.0445 (4) | 0.6018 (4) | 0.0834 (14) | |
| H9A | 0.1064 | −0.0264 | 0.5961 | 0.100* | |
| C10 | 0.5976 (13) | 0.3193 (4) | 0.3427 (4) | 0.129 (2) | |
| H10A | 0.8040 | 0.2821 | 0.3610 | 0.155* | |
| H10B | 0.4927 | 0.2659 | 0.3281 | 0.155* | |
| C11 | 0.6104 (14) | 0.4292 (5) | 0.2425 (4) | 0.138 (2) | |
| H11A | 0.7199 | 0.4821 | 0.2561 | 0.165* | |
| H11B | 0.4046 | 0.4674 | 0.2246 | 0.165* | |
| C12 | 0.7633 (11) | 0.4158 (4) | 0.1409 (3) | 0.1116 (17) | |
| H12A | 0.7768 | 0.4944 | 0.0758 | 0.167* | |
| H12B | 0.6465 | 0.3692 | 0.1229 | 0.167* | |
| H12C | 0.9645 | 0.3752 | 0.1591 | 0.167* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.082 (2) | 0.0819 (19) | 0.0924 (19) | −0.0227 (18) | −0.0007 (18) | −0.0351 (17) |
| O2 | 0.149 (3) | 0.0806 (19) | 0.122 (2) | −0.028 (2) | −0.029 (2) | −0.0475 (19) |
| O3 | 0.128 (3) | 0.103 (2) | 0.104 (2) | −0.035 (2) | 0.038 (2) | −0.0672 (19) |
| O4 | 0.123 | 0.115 | 0.097 | −0.056 | 0.021 | −0.063 |
| N1 | 0.068 (2) | 0.076 (2) | 0.0711 (19) | −0.031 (2) | 0.0100 (19) | −0.0344 (17) |
| N2 | 0.073 (3) | 0.088 (2) | 0.074 (2) | 0.010 (2) | 0.006 (2) | −0.0304 (18) |
| C1 | 0.133 (5) | 0.088 (3) | 0.104 (3) | 0.007 (4) | 0.004 (4) | −0.007 (3) |
| C2 | 0.070 (4) | 0.089 (3) | 0.126 (4) | −0.012 (3) | −0.017 (3) | −0.033 (3) |
| C3 | 0.079 (4) | 0.063 (3) | 0.094 (3) | 0.001 (3) | −0.041 (3) | −0.025 (3) |
| C4 | 0.058 (3) | 0.066 (2) | 0.084 (3) | 0.016 (2) | −0.030 (2) | −0.041 (2) |
| C5 | 0.050 (3) | 0.065 (2) | 0.067 (2) | 0.002 (2) | −0.010 (2) | −0.034 (2) |
| C6 | 0.053 (3) | 0.071 (2) | 0.059 (2) | 0.005 (2) | −0.013 (2) | −0.037 (2) |
| C7 | 0.043 (2) | 0.064 (2) | 0.054 (2) | 0.021 (2) | −0.0114 (19) | −0.0212 (19) |
| C8 | 0.092 (4) | 0.090 (3) | 0.068 (3) | 0.036 (3) | −0.019 (3) | −0.049 (2) |
| C9 | 0.104 (4) | 0.069 (3) | 0.089 (3) | 0.014 (3) | −0.023 (3) | −0.048 (2) |
| C10 | 0.132 (4) | 0.115 (4) | 0.088 (3) | 0.026 (3) | 0.038 (3) | −0.026 (3) |
| C11 | 0.155 (5) | 0.133 (4) | 0.091 (3) | 0.031 (4) | 0.014 (4) | −0.041 (3) |
| C12 | 0.106 (4) | 0.132 (4) | 0.066 (2) | 0.012 (3) | 0.005 (3) | −0.030 (3) |
Geometric parameters (Å, °)
| O1—C3 | 1.326 (5) | C4—C9 | 1.400 (5) |
| O1—C2 | 1.446 (4) | C5—C6 | 1.373 (4) |
| O2—C3 | 1.223 (4) | C5—H5A | 0.9300 |
| O3—N1 | 1.211 (3) | C6—C7 | 1.432 (4) |
| O4—N1 | 1.188 (3) | C7—C8 | 1.432 (5) |
| N1—C6 | 1.436 (4) | C8—C9 | 1.304 (5) |
| N2—C7 | 1.326 (4) | C8—H8A | 0.9300 |
| N2—C10 | 1.505 (5) | C9—H9A | 0.9300 |
| N2—H2A | 0.8600 | C10—C11 | 1.393 (5) |
| C1—C2 | 1.443 (5) | C10—H10A | 0.9700 |
| C1—H1A | 0.9600 | C10—H10B | 0.9700 |
| C1—H1B | 0.9600 | C11—C12 | 1.500 (5) |
| C1—H1C | 0.9600 | C11—H11A | 0.9700 |
| C2—H2B | 0.9700 | C11—H11B | 0.9700 |
| C2—H2C | 0.9700 | C12—H12A | 0.9600 |
| C3—C4 | 1.488 (5) | C12—H12B | 0.9600 |
| C4—C5 | 1.372 (4) | C12—H12C | 0.9600 |
| C3—O1—C2 | 117.2 (3) | C5—C6—N1 | 115.8 (3) |
| O4—N1—O3 | 120.0 (3) | C7—C6—N1 | 121.9 (3) |
| O4—N1—C6 | 119.2 (3) | N2—C7—C6 | 123.9 (4) |
| O3—N1—C6 | 120.8 (3) | N2—C7—C8 | 123.4 (3) |
| C7—N2—C10 | 121.4 (4) | C6—C7—C8 | 112.6 (3) |
| C7—N2—H2A | 119.3 | C9—C8—C7 | 124.2 (4) |
| C10—N2—H2A | 119.3 | C9—C8—H8A | 117.9 |
| C2—C1—H1A | 109.5 | C7—C8—H8A | 117.9 |
| C2—C1—H1B | 109.5 | C8—C9—C4 | 122.3 (4) |
| H1A—C1—H1B | 109.5 | C8—C9—H9A | 118.8 |
| C2—C1—H1C | 109.5 | C4—C9—H9A | 118.8 |
| H1A—C1—H1C | 109.5 | C11—C10—N2 | 114.4 (4) |
| H1B—C1—H1C | 109.5 | C11—C10—H10A | 108.7 |
| C1—C2—O1 | 111.7 (4) | N2—C10—H10A | 108.7 |
| C1—C2—H2B | 109.3 | C11—C10—H10B | 108.7 |
| O1—C2—H2B | 109.3 | N2—C10—H10B | 108.7 |
| C1—C2—H2C | 109.3 | H10A—C10—H10B | 107.6 |
| O1—C2—H2C | 109.3 | C10—C11—C12 | 113.1 (4) |
| H2B—C2—H2C | 107.9 | C10—C11—H11A | 109.0 |
| O2—C3—O1 | 123.7 (4) | C12—C11—H11A | 109.0 |
| O2—C3—C4 | 121.8 (5) | C10—C11—H11B | 109.0 |
| O1—C3—C4 | 114.4 (4) | C12—C11—H11B | 109.0 |
| C5—C4—C9 | 116.8 (4) | H11A—C11—H11B | 107.8 |
| C5—C4—C3 | 122.8 (4) | C11—C12—H12A | 109.5 |
| C9—C4—C3 | 120.4 (4) | C11—C12—H12B | 109.5 |
| C4—C5—C6 | 121.8 (3) | H12A—C12—H12B | 109.5 |
| C4—C5—H5A | 119.1 | C11—C12—H12C | 109.5 |
| C6—C5—H5A | 119.1 | H12A—C12—H12C | 109.5 |
| C5—C6—C7 | 122.2 (3) | H12B—C12—H12C | 109.5 |
| C3—O1—C2—C1 | 87.3 (5) | C5—C6—C7—N2 | 176.3 (4) |
| C2—O1—C3—O2 | 3.0 (6) | N1—C6—C7—N2 | −2.0 (6) |
| C2—O1—C3—C4 | 179.2 (3) | C5—C6—C7—C8 | 0.2 (5) |
| O2—C3—C4—C5 | 172.1 (4) | N1—C6—C7—C8 | −178.1 (3) |
| O1—C3—C4—C5 | −4.1 (6) | N2—C7—C8—C9 | −179.4 (4) |
| O2—C3—C4—C9 | −6.9 (7) | C6—C7—C8—C9 | −3.2 (6) |
| O1—C3—C4—C9 | 176.9 (4) | C7—C8—C9—C4 | 4.6 (7) |
| C9—C4—C5—C6 | −0.4 (6) | C5—C4—C9—C8 | −2.6 (6) |
| C3—C4—C5—C6 | −179.4 (4) | C3—C4—C9—C8 | 176.5 (4) |
| C4—C5—C6—C7 | 1.5 (6) | C7—N2—C10—C11 | 148.5 (5) |
| C4—C5—C6—N1 | 179.9 (3) | N2—C10—C11—C12 | −178.8 (4) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2A···O4 | 0.86 | 2.02 | 2.635 (5) | 128 |
| N2—H2A···O4i | 0.86 | 2.55 | 3.324 (6) | 150 |
Symmetry codes: (i) −x+1, −y+1, −z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HK2690).
References
- Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
- Ates-Alagoz, Z. & Buyukbingol, E. (2001). Heterocycl. Commun.7, 455–460.
- Enraf–Nonius (1989). CAD-4 Software Enraf–Nonius, Delft, The Netherlands.
- Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
- Harms, K. & Wocadlo, S. (1995). XCAD4 University of Marburg, Germany.
- North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.
- Oezden, S., Atabey, D., Yildiz, S. & Goeker, H. (2005). Bioorg. Med. Chem.13, 1587–1597. [DOI] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680901873X/hk2690sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S160053680901873X/hk2690Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


