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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 May 7;65(Pt 6):o1217. doi: 10.1107/S1600536809016468

2,6-Bis(trifluoro­meth­yl)benzoic acid

John M Tobin a, Jason D Masuda a,*
PMCID: PMC2969748  PMID: 21583086

Abstract

The title compound, C9H4F6O2, contains two mol­ecules in the asymmetric unit, one of which exhibits disorder in both of its trifluoro­methyl groups. The dihedral angles between the benzene ring and the carboxyl group are 71.5 (2) and 99.3 (2)° in the two independent mol­ecules. The compound exhibits a catemeric structure resulting from inter­molecular O—H⋯O hydrogen bonding between the carboxyl groups.

Related literature

There is only one example in the literature of a crystallographically characterized benzoic acid with trifluoro­methyl groups in the ortho position, namely 2-trifluoro­methyl-3-pyrrole benzoic acid (see Faigl et al., 1999). For a recent example of crystal engineering to promote the formation of dimeric or catemeric structures in benzoic acids, see: Moorthy et al. (2002). For synthesis details, see: Dmowski & Piasecka-Macieiewska (1998).graphic file with name e-65-o1217-scheme1.jpg

Experimental

Crystal data

  • C9H4F6O2

  • M r = 258.12

  • Monoclinic, Inline graphic

  • a = 10.873 (2) Å

  • b = 15.755 (3) Å

  • c = 11.561 (2) Å

  • β = 94.961 (2)°

  • V = 1973.0 (6) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 0.20 mm−1

  • T = 296 K

  • 0.39 × 0.31 × 0.26 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2008) T min = 0.834, T max = 0.951

  • 12904 measured reflections

  • 3438 independent reflections

  • 2889 reflections with I > 2σ(I)

  • R int = 0.021

Refinement

  • R[F 2 > 2σ(F 2)] = 0.039

  • wR(F 2) = 0.112

  • S = 1.02

  • 3438 reflections

  • 331 parameters

  • H-atom parameters constrained

  • Δρmax = 0.21 e Å−3

  • Δρmin = −0.23 e Å−3

Data collection: APEX2 (Bruker, 2008); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809016468/bi2369sup1.cif

e-65-o1217-sup1.cif (19.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016468/bi2369Isup2.hkl

e-65-o1217-Isup2.hkl (168.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2A⋯O4i 0.82 1.82 2.6340 (19) 169
O3—H3A⋯O1 0.82 1.88 2.6951 (18) 176

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank Saint Mary’s University for providing funding in the form of initial operating funds (JDM) and student funding through the Summer Employment Experience Program (JMT).

supplementary crystallographic information

Comment

The title molecule crystallizes in a catemer motif, a relatively rare form compared to the typical dimeric motif exhibited by benzoic acids resulting from intermolecular hydrogen bonding between the carboxylic acid groups (Moorthy et al., 2002). The sterically bulky o-CF3 groups result in the carboxylic acid fragments being twisted with respect to the aryl ring. This results in dihedral angles between the aryl ring and carboxylic acid fragments of C7—C2—C1—O1 = 71.5 (2)° and C12—C11—C10—O4 = 99.3 (2)°.

Experimental

The title compound was prepared following the literature methods (Dmowski & Piasecka-Macieiewska, 1998) with a slight modification. The compound crystallized from the oily reaction mixture that remained after acidification of the potassium benzoate salt with concentrated HCl, extraction of the organic components with toluene, drying of the organic fraction with magnesium sulfate and concentration by rotary evaporation.

Refinement

H atoms were placed in geometrically idealized positions with C—H = 0.93 Å and O—H = 0.82 Å and constrained to ride on the parent atom with Uiso(H) = 1.2 Ueq(C) or 1.5 Ueq(O). The trifluoromethyl groups belonging to C17 and C18 were modeled with a two-site disorder of the F atoms with refined site occupancy factors of 0.569 (5):0.431 (5) and 0.689 (5):0.311 (5), respectively.

Figures

Fig. 1.

Fig. 1.

The two molecules in the asymmetric unit with displacement ellipsoids shown at 50% probability for non-H atoms. For the disordered CF3 groups, both disorder components are shown.

Fig. 2.

Fig. 2.

Ball and stick representation featuring the catemeric structure formed through O—H···O hydrogen bonding. H atoms not involved in H-bonding and the CF3 groups have been omitted for clarity.

Crystal data

C9H4F6O2 F(000) = 1024
Mr = 258.12 Dx = 1.738 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 6970 reflections
a = 10.873 (2) Å θ = 2.3–28.0°
b = 15.755 (3) Å µ = 0.20 mm1
c = 11.561 (2) Å T = 296 K
β = 94.961 (2)° Block, colorless
V = 1973.0 (6) Å3 0.39 × 0.31 × 0.26 mm
Z = 8

Data collection

Bruker APEXII CCD diffractometer 3438 independent reflections
Radiation source: fine-focus sealed tube 2889 reflections with I > 2σ(I)
graphite Rint = 0.021
φ and ω scans θmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2008) h = −12→12
Tmin = 0.834, Tmax = 0.951 k = −18→18
12904 measured reflections l = −13→11

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.112 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.058P)2 + 0.5224P] where P = (Fo2 + 2Fc2)/3
3438 reflections (Δ/σ)max < 0.001
331 parameters Δρmax = 0.21 e Å3
0 restraints Δρmin = −0.23 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
C1 0.25273 (16) 0.14562 (11) 0.00186 (14) 0.0532 (4)
C2 0.34011 (15) 0.08652 (10) 0.07069 (14) 0.0490 (4)
C3 0.43893 (16) 0.11687 (12) 0.14433 (16) 0.0564 (4)
C4 0.51596 (17) 0.06028 (14) 0.20807 (17) 0.0666 (5)
H4A 0.5807 0.0808 0.2581 0.080*
C5 0.49740 (19) −0.02557 (14) 0.19783 (18) 0.0689 (5)
H5A 0.5498 −0.0629 0.2405 0.083*
C6 0.40178 (18) −0.05640 (12) 0.12489 (16) 0.0614 (5)
H6A 0.3900 −0.1147 0.1175 0.074*
C7 0.32257 (15) −0.00131 (10) 0.06209 (14) 0.0508 (4)
C8 0.46743 (19) 0.20978 (14) 0.1562 (2) 0.0756 (6)
F1 0.5244 (2) 0.22865 (11) 0.25885 (18) 0.1361 (7)
F2 0.53907 (15) 0.23619 (9) 0.07602 (19) 0.1232 (7)
F3 0.36850 (12) 0.25931 (8) 0.14440 (14) 0.0893 (4)
C9 0.21830 (18) −0.03876 (12) −0.01534 (17) 0.0632 (5)
F4 0.11518 (12) −0.04286 (10) 0.03733 (13) 0.0975 (4)
F5 0.19338 (14) 0.00483 (8) −0.11254 (11) 0.0911 (4)
F6 0.24344 (13) −0.11707 (8) −0.04877 (12) 0.0906 (4)
C10 0.10257 (17) 0.15284 (11) 0.30263 (15) 0.0545 (4)
C11 0.07034 (16) 0.13002 (10) 0.42282 (14) 0.0514 (4)
C12 −0.04150 (17) 0.15569 (11) 0.46310 (15) 0.0561 (4)
C13 −0.0643 (2) 0.14110 (13) 0.57757 (18) 0.0711 (5)
H13A −0.1380 0.1593 0.6045 0.085*
C14 0.0220 (2) 0.09977 (15) 0.65140 (18) 0.0801 (6)
H14A 0.0066 0.0906 0.7283 0.096*
C15 0.1301 (2) 0.07212 (14) 0.61252 (17) 0.0730 (6)
H15A 0.1869 0.0430 0.6626 0.088*
C16 0.15558 (18) 0.08709 (12) 0.49899 (16) 0.0603 (5)
O1 0.14736 (11) 0.15753 (8) 0.02411 (10) 0.0606 (3)
O2 0.30404 (14) 0.18036 (9) −0.08444 (12) 0.0751 (4)
H2A 0.2549 0.2129 −0.1192 0.113*
O3 0.05615 (13) 0.10397 (9) 0.22093 (11) 0.0684 (4)
H3A 0.0818 0.1182 0.1592 0.103*
O4 0.16936 (19) 0.21110 (11) 0.28586 (13) 0.0999 (6)
C17 −0.13950 (10) 0.19782 (8) 0.38373 (10) 0.0726 (5)
F7A −0.09321 (12) 0.25255 (8) 0.31618 (10) 0.1010 (13) 0.569 (5)
F8A −0.19164 (10) 0.13805 (10) 0.31178 (10) 0.0901 (11) 0.569 (5)
F9A −0.22489 (10) 0.23045 (8) 0.43893 (12) 0.139 (2) 0.569 (5)
F7B −0.17175 (10) 0.16347 (9) 0.28614 (11) 0.144 (3) 0.431 (5)
F9B −0.10986 (11) 0.28028 (10) 0.35381 (9) 0.1164 (19) 0.431 (5)
F8B −0.24254 (11) 0.21614 (8) 0.43317 (12) 0.0970 (19) 0.431 (5)
C18 0.27540 (10) 0.05569 (8) 0.46034 (11) 0.0751 (6)
F10A 0.26369 (10) 0.01894 (8) 0.35789 (13) 0.0877 (11) 0.689 (5)
F11A 0.36230 (10) 0.11205 (10) 0.46284 (11) 0.1163 (14) 0.689 (5)
F12A 0.32020 (9) −0.01015 (9) 0.52898 (13) 0.1142 (11) 0.689 (5)
F10B 0.33236 (9) 0.12165 (10) 0.40107 (11) 0.108 (2) 0.311 (5)
F12B 0.35672 (10) 0.03614 (8) 0.54011 (13) 0.125 (3) 0.311 (5)
F11B 0.26173 (10) 0.00490 (9) 0.37781 (12) 0.154 (5) 0.311 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0618 (10) 0.0542 (9) 0.0442 (9) 0.0104 (7) 0.0085 (7) 0.0040 (7)
C2 0.0497 (8) 0.0552 (9) 0.0428 (8) 0.0073 (7) 0.0077 (7) 0.0041 (7)
C3 0.0508 (9) 0.0623 (10) 0.0566 (10) 0.0011 (8) 0.0089 (8) −0.0018 (8)
C4 0.0507 (10) 0.0864 (14) 0.0607 (11) 0.0064 (9) −0.0062 (8) −0.0020 (10)
C5 0.0631 (11) 0.0776 (13) 0.0641 (12) 0.0199 (10) −0.0061 (9) 0.0105 (10)
C6 0.0689 (11) 0.0567 (10) 0.0582 (11) 0.0113 (8) 0.0025 (9) 0.0077 (8)
C7 0.0535 (9) 0.0551 (9) 0.0436 (9) 0.0056 (7) 0.0044 (7) 0.0031 (7)
C8 0.0608 (11) 0.0702 (12) 0.0965 (16) −0.0044 (10) 0.0112 (11) −0.0113 (11)
F1 0.1536 (16) 0.0987 (11) 0.1447 (15) −0.0163 (10) −0.0518 (13) −0.0361 (10)
F2 0.1085 (11) 0.0773 (9) 0.1956 (19) −0.0172 (8) 0.0813 (12) −0.0035 (10)
F3 0.0828 (8) 0.0627 (7) 0.1245 (12) 0.0037 (6) 0.0221 (8) −0.0124 (7)
C9 0.0672 (11) 0.0597 (11) 0.0615 (11) 0.0030 (9) −0.0013 (9) 0.0003 (9)
F4 0.0628 (7) 0.1270 (12) 0.1024 (10) −0.0164 (7) 0.0050 (7) −0.0162 (9)
F5 0.1201 (11) 0.0832 (8) 0.0628 (7) −0.0013 (7) −0.0338 (7) 0.0035 (6)
F6 0.1079 (10) 0.0632 (7) 0.0972 (10) 0.0013 (6) −0.0118 (8) −0.0186 (6)
C10 0.0609 (10) 0.0574 (10) 0.0454 (9) −0.0107 (8) 0.0059 (7) −0.0075 (7)
C11 0.0640 (10) 0.0495 (9) 0.0408 (8) −0.0136 (7) 0.0046 (7) −0.0079 (7)
C12 0.0679 (11) 0.0526 (9) 0.0486 (9) −0.0112 (8) 0.0089 (8) −0.0117 (7)
C13 0.0839 (13) 0.0731 (12) 0.0591 (12) −0.0128 (10) 0.0231 (10) −0.0126 (10)
C14 0.1122 (18) 0.0860 (15) 0.0440 (10) −0.0135 (13) 0.0171 (11) 0.0010 (10)
C15 0.0927 (15) 0.0781 (13) 0.0473 (10) −0.0043 (11) 0.0009 (10) 0.0031 (9)
C16 0.0698 (11) 0.0606 (10) 0.0499 (10) −0.0094 (9) 0.0017 (8) −0.0042 (8)
O1 0.0575 (7) 0.0753 (8) 0.0490 (7) 0.0156 (6) 0.0041 (5) 0.0077 (6)
O2 0.0858 (9) 0.0756 (9) 0.0677 (8) 0.0301 (7) 0.0294 (7) 0.0303 (7)
O3 0.0850 (9) 0.0783 (9) 0.0420 (6) −0.0259 (7) 0.0064 (6) −0.0103 (6)
O4 0.1505 (15) 0.0963 (11) 0.0575 (9) −0.0706 (11) 0.0357 (9) −0.0223 (8)
C17 0.0723 (13) 0.0783 (14) 0.0675 (13) 0.0023 (11) 0.0087 (10) −0.0092 (11)
F7A 0.115 (2) 0.088 (2) 0.099 (2) 0.0095 (16) 0.0008 (17) 0.0347 (18)
F8A 0.0718 (17) 0.0977 (19) 0.095 (2) −0.0026 (14) −0.0251 (14) −0.0169 (16)
F9A 0.153 (4) 0.144 (3) 0.121 (4) 0.087 (3) 0.022 (3) −0.030 (3)
F7B 0.156 (5) 0.187 (5) 0.079 (3) 0.090 (4) −0.040 (3) −0.064 (3)
F9B 0.100 (3) 0.097 (3) 0.151 (4) 0.009 (2) 0.005 (3) 0.039 (3)
F8B 0.055 (2) 0.146 (4) 0.092 (4) 0.006 (3) 0.018 (2) 0.007 (3)
C18 0.0736 (13) 0.0807 (15) 0.0699 (14) −0.0014 (11) 0.0001 (11) −0.0030 (11)
F10A 0.082 (2) 0.116 (2) 0.0655 (15) 0.0210 (16) 0.0119 (13) −0.0152 (16)
F11A 0.0730 (14) 0.115 (2) 0.161 (3) −0.0229 (14) 0.0114 (17) −0.033 (2)
F12A 0.1041 (18) 0.130 (2) 0.107 (2) 0.0381 (17) −0.0002 (15) 0.0232 (16)
F10B 0.076 (3) 0.109 (4) 0.146 (6) 0.006 (3) 0.039 (3) 0.029 (4)
F12B 0.084 (3) 0.204 (9) 0.081 (4) 0.039 (5) −0.020 (3) 0.023 (4)
F11B 0.099 (7) 0.145 (7) 0.222 (11) −0.022 (5) 0.038 (6) −0.109 (7)

Geometric parameters (Å, °)

C1—O1 1.210 (2) C11—C12 1.399 (3)
C1—O2 1.305 (2) C12—C13 1.387 (3)
C1—C2 1.507 (2) C12—C17 1.500 (2)
C2—C3 1.396 (2) C13—C14 1.376 (3)
C2—C7 1.399 (2) C13—H13A 0.930
C3—C4 1.390 (3) C14—C15 1.365 (3)
C3—C8 1.500 (3) C14—H14A 0.930
C4—C5 1.371 (3) C15—C16 1.385 (3)
C4—H4A 0.930 C15—H15A 0.930
C5—C6 1.370 (3) C16—C18 1.498 (2)
C5—H5A 0.930 O2—H2A 0.820
C6—C7 1.383 (2) O3—H3A 0.820
C6—H6A 0.930 C17—F7B 1.2729 (11)
C7—C9 1.503 (3) C17—F9A 1.2791 (11)
C8—F1 1.324 (3) C17—F7A 1.2941 (11)
C8—F3 1.326 (3) C17—F8B 1.3326 (12)
C8—F2 1.328 (3) C17—F8A 1.3485 (12)
C9—F4 1.323 (2) C17—F9B 1.3895 (12)
C9—F5 1.325 (2) C18—F11B 1.2443 (10)
C9—F6 1.328 (2) C18—F12B 1.2593 (11)
C10—O4 1.197 (2) C18—F11A 1.2952 (11)
C10—O3 1.287 (2) C18—F10A 1.3146 (11)
C10—C11 1.506 (2) C18—F12A 1.3697 (11)
C11—C16 1.397 (3) C18—F10B 1.4165 (12)
O1—C1—O2 124.93 (16) C13—C12—C17 118.76 (16)
O1—C1—C2 123.28 (15) C11—C12—C17 121.09 (14)
O2—C1—C2 111.78 (14) C14—C13—C12 120.1 (2)
C3—C2—C7 118.36 (15) C14—C13—H13A 119.9
C3—C2—C1 121.80 (15) C12—C13—H13A 119.9
C7—C2—C1 119.84 (15) C15—C14—C13 120.45 (19)
C4—C3—C2 120.00 (17) C15—C14—H14A 119.8
C4—C3—C8 117.85 (18) C13—C14—H14A 119.8
C2—C3—C8 122.14 (17) C14—C15—C16 120.4 (2)
C5—C4—C3 120.63 (18) C14—C15—H15A 119.8
C5—C4—H4A 119.7 C16—C15—H15A 119.8
C3—C4—H4A 119.7 C15—C16—C11 120.24 (19)
C6—C5—C4 120.08 (17) C15—C16—C18 118.50 (17)
C6—C5—H5A 120.0 C11—C16—C18 121.25 (15)
C4—C5—H5A 120.0 C1—O2—H2A 109.5
C5—C6—C7 120.36 (18) C10—O3—H3A 109.5
C5—C6—H6A 119.8 F9A—C17—F7A 111.7
C7—C6—H6A 119.8 F7B—C17—F8B 107.2
C6—C7—C2 120.55 (16) F9A—C17—F8A 107.7
C6—C7—C9 118.00 (16) F7A—C17—F8A 104.9
C2—C7—C9 121.45 (15) F7B—C17—F9B 103.2
F1—C8—F3 105.80 (19) F8B—C17—F9B 97.2
F1—C8—F2 107.3 (2) F7B—C17—C12 118.73 (8)
F3—C8—F2 105.3 (2) F9A—C17—C12 112.38 (8)
F1—C8—C3 112.2 (2) F7A—C17—C12 111.79 (8)
F3—C8—C3 113.92 (17) F8B—C17—C12 114.37 (8)
F2—C8—C3 111.77 (18) F8A—C17—C12 107.87 (8)
F4—C9—F5 107.23 (17) F9B—C17—C12 113.47 (8)
F4—C9—F6 107.01 (17) F11B—C18—F12B 115.7
F5—C9—F6 105.48 (16) F11A—C18—F10A 109.6
F4—C9—C7 111.76 (16) F11A—C18—F12A 106.5
F5—C9—C7 112.95 (16) F10A—C18—F12A 101.0
F6—C9—C7 111.98 (16) F11B—C18—F10B 97.4
O4—C10—O3 123.01 (17) F12B—C18—F10B 103.0
O4—C10—C11 121.71 (15) F11B—C18—C16 113.07 (8)
O3—C10—C11 115.25 (15) F12B—C18—C16 115.85 (8)
C16—C11—C12 118.60 (16) F11A—C18—C16 114.75 (8)
C16—C11—C10 120.19 (16) F10A—C18—C16 113.29 (8)
C12—C11—C10 121.10 (16) F12A—C18—C16 110.63 (9)
C13—C12—C11 120.14 (18) F10B—C18—C16 109.27 (9)
C7—C2—C1—O1 71.5 (2) C12—C11—C10—O4 99.3 (2)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O2—H2A···O4i 0.82 1.82 2.6340 (19) 169
O3—H3A···O1 0.82 1.88 2.6951 (18) 176

Symmetry codes: (i) x, −y+1/2, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BI2369).

References

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  3. Faigl, F., Fogassy, K., Szűcs, E., Kovács, K., Keserű, G. M., Harmat, V., Böcski, Z. & Tőke, L. (1999). Tetrahedron, 55, 7881–7892.
  4. Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
  5. Macrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Towler, M. & van de Streek, J. (2006). J. Appl. Cryst.39, 453–457.
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  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

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Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809016468/bi2369sup1.cif

e-65-o1217-sup1.cif (19.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016468/bi2369Isup2.hkl

e-65-o1217-Isup2.hkl (168.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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