Abstract
The title compound, C16H13N3O3S2, was prepared by reaction of salicylaldehyde and sulfathiazole in methanol. The dihedral angle between the central benzene ring and the thiazole ring is 85.2 (2)° and that between the two benzene rings is 17.9 (2)°. An intramolecular O—H⋯N hydrogen bond generates an S(6) ring motif. In the crystal, molecules are held together by intermolecular N—H⋯N and C—H⋯O hydrogen bonds, forming a two-dimensional network parallel to the bc plane.
Related literature
For the biological activity of Schiff bases, see: Billson et al. (2000 ▶); Carlton et al. (1995 ▶). For a related structure, see: Li et al. (2006 ▶).
Experimental
Crystal data
C16H13N3O3S2
M r = 359.41
Monoclinic,
a = 16.1693 (18) Å
b = 9.1211 (11) Å
c = 11.0292 (13) Å
β = 101.896 (1)°
V = 1591.7 (3) Å3
Z = 4
Mo Kα radiation
μ = 0.36 mm−1
T = 298 K
0.40 × 0.37 × 0.20 mm
Data collection
Bruker SMART CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.871, T max = 0.932
7737 measured reflections
2806 independent reflections
1927 reflections with I > 2σ(I)
R int = 0.031
Refinement
R[F 2 > 2σ(F 2)] = 0.041
wR(F 2) = 0.108
S = 1.04
2806 reflections
224 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.30 e Å−3
Δρmin = −0.30 e Å−3
Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809033704/ci2883sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033704/ci2883Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O3—H3A⋯N1 | 0.97 (4) | 1.73 (4) | 2.636 (4) | 154 (4) |
| N2—H2A⋯N3i | 0.89 (3) | 1.97 (3) | 2.856 (3) | 179 (3) |
| C6—H6⋯O1ii | 0.93 | 2.58 | 3.334 (4) | 139 |
| C16—H16⋯O2iii | 0.93 | 2.52 | 3.351 (4) | 148 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
The work was supported financially by research grant No. 09JS068 from the Phytochemistry Key Laboratory of Shaanxi Province.
supplementary crystallographic information
Comment
The synthesis and characterization of Schiff base compounds have received a great deal of attention due to their biological activities, such as anti-bacterial, anti-cancer and anti-virus (Billson et al., 2000; Carlton et al., 1995). In this paper, we report the crystal structure of the title compound, a new Schiff-base ligand, (I).
Bbond lengths and angles in (I) are normal and they agree with those observed in a salicylaldehyde Schiff base (Li et al., 2006). The C7db// N1 bond length of 1.269 (4) Å conforms to the value for a double bond. The dihedral angle between C1-C6 benzene ring and thiazole ring is 85.2 (2)°. The dihedral angle between the two benzene rings is 17.9 (2)°. An intramolecular O3—H3A···N1 hydrogen bond generates an S(6) ring motif (Fig. 1).
The molecules are held together by N—H···N and C—H···O intermolecular hydrogen bonds (Table 1), forming a two-dimensional network parallel to the bc plane (Fig. 2).
Experimental
All chemicals were of reagent grade and commercially available from the Beijing Chemical Reagents Company of China, and were used without further purification. A methanol solution (10 ml) of salicylaldehyde (0.1 mmol, 12.2 mg) and sulfathiazloe (0.1 mmol, 25.5 mg) was stirred at room temperature for 30 min and then filtered. The filtrate was left to stand in air for 7 d, and the title compound was formed in slow evaporation of the solvent. The crystals were collected, washed with methanol and dried in a vacuum desiccator using anhydrous CaCl2 (yield 64%).
Refinement
Atoms H2A and H3A were located in a difference map and refined freely. The remaining H atoms were positioned geometrically [C-H = 0.93 Å] and constrained to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).
Figures
Fig. 1.
The molecular structure of (I), showing 30% probability displacement ellipsoids. Hydrogen bonds are shown as dashed lines.
Fig. 2.
The crystal packing of (I), viewed along the b axis. Hydrogen bonds are shown as dashed lines.
Crystal data
| C16H13N3O3S2 | F(000) = 744 |
| Mr = 359.41 | Dx = 1.500 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 2137 reflections |
| a = 16.1693 (18) Å | θ = 2.6–25.0° |
| b = 9.1211 (11) Å | µ = 0.36 mm−1 |
| c = 11.0292 (13) Å | T = 298 K |
| β = 101.896 (1)° | Block, yellow |
| V = 1591.7 (3) Å3 | 0.40 × 0.37 × 0.20 mm |
| Z = 4 |
Data collection
| Bruker SMART CCD area-detector diffractometer | 2806 independent reflections |
| Radiation source: fine-focus sealed tube | 1927 reflections with I > 2σ(I) |
| graphite | Rint = 0.031 |
| φ and ω scans | θmax = 25.0°, θmin = 1.3° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −19→19 |
| Tmin = 0.871, Tmax = 0.932 | k = −10→10 |
| 7737 measured reflections | l = −8→13 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.108 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.04P)2 + 1.0601P] where P = (Fo2 + 2Fc2)/3 |
| 2806 reflections | (Δ/σ)max = 0.001 |
| 224 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| N1 | 0.54316 (16) | 0.2823 (3) | 0.3783 (2) | 0.0517 (7) | |
| N2 | 0.95632 (15) | 0.6826 (3) | 0.4499 (2) | 0.0375 (6) | |
| H2A | 0.9910 (19) | 0.640 (3) | 0.513 (3) | 0.055 (10)* | |
| N3 | 0.93153 (14) | 0.4585 (2) | 0.3503 (2) | 0.0370 (6) | |
| O1 | 0.86589 (13) | 0.4333 (2) | 0.12312 (17) | 0.0484 (5) | |
| O2 | 0.91746 (13) | 0.2184 (2) | 0.2533 (2) | 0.0506 (6) | |
| O3 | 0.45423 (16) | 0.1377 (3) | 0.5144 (2) | 0.0728 (8) | |
| H3A | 0.498 (3) | 0.166 (5) | 0.470 (4) | 0.109* | |
| S1 | 0.87791 (4) | 0.35993 (8) | 0.24101 (7) | 0.0379 (2) | |
| S2 | 0.86729 (5) | 0.71804 (9) | 0.23688 (7) | 0.0475 (2) | |
| C1 | 0.77728 (17) | 0.3381 (3) | 0.2773 (3) | 0.0363 (7) | |
| C2 | 0.70885 (18) | 0.4196 (3) | 0.2163 (3) | 0.0441 (8) | |
| H2 | 0.7157 | 0.4862 | 0.1553 | 0.053* | |
| C3 | 0.63071 (18) | 0.4019 (4) | 0.2458 (3) | 0.0494 (8) | |
| H3B | 0.5849 | 0.4559 | 0.2036 | 0.059* | |
| C4 | 0.61981 (19) | 0.3047 (4) | 0.3375 (3) | 0.0458 (8) | |
| C5 | 0.68850 (19) | 0.2214 (3) | 0.3959 (3) | 0.0482 (8) | |
| H5 | 0.6814 | 0.1526 | 0.4551 | 0.058* | |
| C6 | 0.76694 (19) | 0.2390 (3) | 0.3675 (3) | 0.0438 (7) | |
| H6 | 0.8127 | 0.1845 | 0.4090 | 0.053* | |
| C7 | 0.4851 (2) | 0.3782 (4) | 0.3608 (3) | 0.0555 (9) | |
| H7 | 0.4919 | 0.4613 | 0.3151 | 0.067* | |
| C8 | 0.40865 (19) | 0.3643 (4) | 0.4087 (3) | 0.0496 (8) | |
| C9 | 0.39700 (19) | 0.2481 (4) | 0.4865 (3) | 0.0527 (8) | |
| C10 | 0.3252 (2) | 0.2432 (4) | 0.5367 (3) | 0.0633 (10) | |
| H10 | 0.3174 | 0.1666 | 0.5889 | 0.076* | |
| C11 | 0.2658 (2) | 0.3519 (5) | 0.5089 (3) | 0.0662 (11) | |
| H11 | 0.2180 | 0.3485 | 0.5435 | 0.079* | |
| C12 | 0.2749 (2) | 0.4648 (5) | 0.4319 (4) | 0.0655 (10) | |
| H12 | 0.2333 | 0.5364 | 0.4125 | 0.079* | |
| C13 | 0.3464 (2) | 0.4713 (4) | 0.3833 (3) | 0.0625 (10) | |
| H13 | 0.3534 | 0.5493 | 0.3320 | 0.075* | |
| C14 | 0.92217 (16) | 0.6028 (3) | 0.3501 (2) | 0.0336 (6) | |
| C15 | 0.9408 (2) | 0.8303 (3) | 0.4400 (3) | 0.0477 (8) | |
| H15 | 0.9614 | 0.8969 | 0.5029 | 0.057* | |
| C16 | 0.8939 (2) | 0.8685 (4) | 0.3323 (3) | 0.0554 (9) | |
| H16 | 0.8772 | 0.9641 | 0.3104 | 0.066* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| N1 | 0.0409 (15) | 0.0615 (19) | 0.0528 (17) | −0.0026 (14) | 0.0101 (13) | 0.0003 (14) |
| N2 | 0.0399 (14) | 0.0344 (14) | 0.0362 (14) | −0.0024 (11) | 0.0033 (12) | −0.0005 (12) |
| N3 | 0.0402 (13) | 0.0306 (14) | 0.0378 (13) | 0.0001 (11) | 0.0027 (11) | −0.0001 (11) |
| O1 | 0.0591 (13) | 0.0538 (14) | 0.0323 (11) | −0.0072 (11) | 0.0092 (9) | −0.0014 (10) |
| O2 | 0.0532 (13) | 0.0349 (12) | 0.0674 (15) | 0.0032 (10) | 0.0213 (11) | −0.0078 (11) |
| O3 | 0.0607 (16) | 0.0759 (19) | 0.0865 (19) | 0.0096 (14) | 0.0256 (14) | 0.0188 (15) |
| S1 | 0.0420 (4) | 0.0339 (4) | 0.0378 (4) | −0.0013 (3) | 0.0086 (3) | −0.0048 (3) |
| S2 | 0.0595 (5) | 0.0377 (5) | 0.0424 (5) | 0.0064 (4) | 0.0033 (4) | 0.0063 (4) |
| C1 | 0.0392 (16) | 0.0360 (16) | 0.0320 (15) | −0.0005 (13) | 0.0032 (12) | −0.0047 (13) |
| C2 | 0.0451 (18) | 0.0501 (19) | 0.0344 (16) | −0.0025 (15) | 0.0018 (14) | 0.0069 (15) |
| C3 | 0.0388 (17) | 0.062 (2) | 0.0437 (19) | 0.0040 (15) | 0.0005 (14) | 0.0058 (16) |
| C4 | 0.0422 (18) | 0.052 (2) | 0.0427 (18) | −0.0049 (15) | 0.0083 (14) | −0.0030 (15) |
| C5 | 0.0508 (19) | 0.048 (2) | 0.0475 (19) | −0.0005 (16) | 0.0134 (15) | 0.0095 (15) |
| C6 | 0.0452 (18) | 0.0428 (18) | 0.0427 (18) | 0.0046 (14) | 0.0073 (14) | 0.0029 (14) |
| C7 | 0.054 (2) | 0.057 (2) | 0.057 (2) | −0.0035 (18) | 0.0133 (17) | 0.0027 (17) |
| C8 | 0.0437 (18) | 0.056 (2) | 0.0481 (19) | −0.0037 (16) | 0.0083 (15) | −0.0077 (17) |
| C9 | 0.0405 (18) | 0.062 (2) | 0.053 (2) | −0.0013 (17) | 0.0044 (16) | −0.0071 (18) |
| C10 | 0.054 (2) | 0.078 (3) | 0.060 (2) | −0.011 (2) | 0.0173 (18) | −0.007 (2) |
| C11 | 0.045 (2) | 0.092 (3) | 0.064 (2) | −0.004 (2) | 0.0176 (18) | −0.025 (2) |
| C12 | 0.052 (2) | 0.072 (3) | 0.070 (3) | 0.0065 (19) | 0.0075 (19) | −0.019 (2) |
| C13 | 0.058 (2) | 0.062 (2) | 0.066 (2) | 0.0037 (19) | 0.0111 (19) | −0.0043 (19) |
| C14 | 0.0300 (14) | 0.0360 (17) | 0.0356 (16) | −0.0015 (12) | 0.0087 (12) | −0.0014 (13) |
| C15 | 0.056 (2) | 0.0333 (18) | 0.054 (2) | −0.0060 (15) | 0.0122 (16) | −0.0056 (15) |
| C16 | 0.068 (2) | 0.0320 (18) | 0.066 (2) | 0.0033 (16) | 0.0122 (19) | 0.0023 (16) |
Geometric parameters (Å, °)
| N1—C7 | 1.269 (4) | C4—C5 | 1.389 (4) |
| N1—C4 | 1.418 (4) | C5—C6 | 1.377 (4) |
| N2—C14 | 1.340 (3) | C5—H5 | 0.93 |
| N2—C15 | 1.371 (4) | C6—H6 | 0.93 |
| N2—H2A | 0.89 (3) | C7—C8 | 1.446 (4) |
| N3—C14 | 1.325 (3) | C7—H7 | 0.93 |
| N3—S1 | 1.607 (2) | C8—C13 | 1.388 (4) |
| O1—S1 | 1.440 (2) | C8—C9 | 1.401 (5) |
| O2—S1 | 1.434 (2) | C9—C10 | 1.386 (5) |
| O3—C9 | 1.359 (4) | C10—C11 | 1.371 (5) |
| O3—H3A | 0.97 (4) | C10—H10 | 0.93 |
| S1—C1 | 1.765 (3) | C11—C12 | 1.362 (5) |
| S2—C16 | 1.728 (3) | C11—H11 | 0.93 |
| S2—C14 | 1.730 (3) | C12—C13 | 1.373 (5) |
| C1—C6 | 1.379 (4) | C12—H12 | 0.93 |
| C1—C2 | 1.387 (4) | C13—H13 | 0.93 |
| C2—C3 | 1.377 (4) | C15—C16 | 1.318 (4) |
| C2—H2 | 0.93 | C15—H15 | 0.93 |
| C3—C4 | 1.384 (4) | C16—H16 | 0.93 |
| C3—H3B | 0.93 | ||
| C7—N1—C4 | 121.4 (3) | N1—C7—C8 | 123.1 (3) |
| C14—N2—C15 | 115.6 (3) | N1—C7—H7 | 118.5 |
| C14—N2—H2A | 119 (2) | C8—C7—H7 | 118.5 |
| C15—N2—H2A | 125 (2) | C13—C8—C9 | 118.2 (3) |
| C14—N3—S1 | 120.72 (19) | C13—C8—C7 | 120.2 (3) |
| C9—O3—H3A | 103 (3) | C9—C8—C7 | 121.5 (3) |
| O2—S1—O1 | 118.59 (13) | O3—C9—C10 | 118.2 (3) |
| O2—S1—N3 | 105.74 (12) | O3—C9—C8 | 121.9 (3) |
| O1—S1—N3 | 111.64 (12) | C10—C9—C8 | 119.9 (3) |
| O2—S1—C1 | 106.91 (13) | C11—C10—C9 | 119.6 (4) |
| O1—S1—C1 | 107.36 (13) | C11—C10—H10 | 120.2 |
| N3—S1—C1 | 105.84 (12) | C9—C10—H10 | 120.2 |
| C16—S2—C14 | 90.97 (15) | C12—C11—C10 | 121.7 (4) |
| C6—C1—C2 | 119.9 (3) | C12—C11—H11 | 119.2 |
| C6—C1—S1 | 119.5 (2) | C10—C11—H11 | 119.2 |
| C2—C1—S1 | 120.7 (2) | C11—C12—C13 | 118.9 (4) |
| C3—C2—C1 | 120.1 (3) | C11—C12—H12 | 120.5 |
| C3—C2—H2 | 119.9 | C13—C12—H12 | 120.5 |
| C1—C2—H2 | 119.9 | C12—C13—C8 | 121.7 (4) |
| C2—C3—C4 | 120.6 (3) | C12—C13—H13 | 119.2 |
| C2—C3—H3B | 119.7 | C8—C13—H13 | 119.2 |
| C4—C3—H3B | 119.7 | N3—C14—N2 | 120.7 (3) |
| C3—C4—C5 | 118.6 (3) | N3—C14—S2 | 130.3 (2) |
| C3—C4—N1 | 125.2 (3) | N2—C14—S2 | 109.0 (2) |
| C5—C4—N1 | 116.2 (3) | C16—C15—N2 | 113.1 (3) |
| C6—C5—C4 | 121.1 (3) | C16—C15—H15 | 123.4 |
| C6—C5—H5 | 119.4 | N2—C15—H15 | 123.4 |
| C4—C5—H5 | 119.4 | C15—C16—S2 | 111.3 (2) |
| C5—C6—C1 | 119.6 (3) | C15—C16—H16 | 124.3 |
| C5—C6—H6 | 120.2 | S2—C16—H16 | 124.3 |
| C1—C6—H6 | 120.2 | ||
| C14—N3—S1—O2 | 166.3 (2) | N1—C7—C8—C13 | −178.2 (3) |
| C14—N3—S1—O1 | 36.0 (3) | N1—C7—C8—C9 | 5.1 (5) |
| C14—N3—S1—C1 | −80.5 (2) | C13—C8—C9—O3 | 178.9 (3) |
| O2—S1—C1—C6 | 34.9 (3) | C7—C8—C9—O3 | −4.3 (5) |
| O1—S1—C1—C6 | 163.2 (2) | C13—C8—C9—C10 | −0.7 (5) |
| N3—S1—C1—C6 | −77.5 (3) | C7—C8—C9—C10 | 176.1 (3) |
| O2—S1—C1—C2 | −145.2 (2) | O3—C9—C10—C11 | −179.1 (3) |
| O1—S1—C1—C2 | −16.9 (3) | C8—C9—C10—C11 | 0.5 (5) |
| N3—S1—C1—C2 | 102.4 (2) | C9—C10—C11—C12 | 0.6 (5) |
| C6—C1—C2—C3 | 0.1 (4) | C10—C11—C12—C13 | −1.5 (5) |
| S1—C1—C2—C3 | −179.8 (2) | C11—C12—C13—C8 | 1.3 (5) |
| C1—C2—C3—C4 | 0.9 (5) | C9—C8—C13—C12 | −0.2 (5) |
| C2—C3—C4—C5 | −2.4 (5) | C7—C8—C13—C12 | −177.0 (3) |
| C2—C3—C4—N1 | 177.4 (3) | S1—N3—C14—N2 | 169.4 (2) |
| C7—N1—C4—C3 | −21.1 (5) | S1—N3—C14—S2 | −8.7 (4) |
| C7—N1—C4—C5 | 158.7 (3) | C15—N2—C14—N3 | −178.5 (3) |
| C3—C4—C5—C6 | 2.8 (5) | C15—N2—C14—S2 | 0.0 (3) |
| N1—C4—C5—C6 | −177.0 (3) | C16—S2—C14—N3 | 178.1 (3) |
| C4—C5—C6—C1 | −1.8 (5) | C16—S2—C14—N2 | −0.1 (2) |
| C2—C1—C6—C5 | 0.3 (4) | C14—N2—C15—C16 | 0.3 (4) |
| S1—C1—C6—C5 | −179.8 (2) | N2—C15—C16—S2 | −0.4 (4) |
| C4—N1—C7—C8 | −175.4 (3) | C14—S2—C16—C15 | 0.3 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O3—H3A···N1 | 0.97 (4) | 1.73 (4) | 2.636 (4) | 154 (4) |
| N2—H2A···N3i | 0.89 (3) | 1.97 (3) | 2.856 (3) | 179 (3) |
| C6—H6···O1ii | 0.93 | 2.58 | 3.334 (4) | 139 |
| C16—H16···O2iii | 0.93 | 2.52 | 3.351 (4) | 148 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) x, −y+1/2, z+1/2; (iii) x, y+1, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CI2883).
References
- Billson, T. S., Crane, J. D., Fox, O. D. & Heath, S. L. (2000). Inorg. Chem. Commun.3, 718–720.
- Bruker (2000). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Carlton, L. D., Schmith, V. D. & Brouwer, K. L. R. (1995). Prostaglandins, 50, 341–347. [DOI] [PubMed]
- Li, Z.-X., Zhang, X.-L. & Wang, X.-L. (2006). Acta Cryst. E62, o4513–o4514.
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809033704/ci2883sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033704/ci2883Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


