Abstract
In the title compound, C14H12BrN3O2·H2O, the benzene ring is oriented at a dihedral angle of 39.66 (11)° with respect to the pyridine ring. The solvent water molecule links with the organic compound via O—H⋯O, O—H⋯N and N—H⋯O hydrogen bonding.
Related literature
For applications of Schiff base compounds, see: Kahwa et al. (1986 ▶); Santos et al. (2001 ▶).
Experimental
Crystal data
C14H12BrN3O2·H2O
M r = 352.18
Monoclinic,
a = 7.7979 (1) Å
b = 12.5678 (2) Å
c = 14.9419 (3) Å
β = 97.449 (1)°
V = 1451.98 (4) Å3
Z = 4
Mo Kα radiation
μ = 2.85 mm−1
T = 296 K
0.43 × 0.28 × 0.22 mm
Data collection
Bruker SMART CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.400, T max = 0.535
12611 measured reflections
3149 independent reflections
2525 reflections with I > 2σ(I)
R int = 0.027
Refinement
R[F 2 > 2σ(F 2)] = 0.027
wR(F 2) = 0.069
S = 1.01
3149 reflections
198 parameters
2 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.41 e Å−3
Δρmin = −0.30 e Å−3
Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680903400X/xu2597sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S160053680903400X/xu2597Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O2—H2A⋯N3 | 0.85 (2) | 2.05 (2) | 2.886 (2) | 168 (2) |
| O2—H2B⋯O1i | 0.82 (3) | 2.47 (3) | 3.118 (2) | 136 (2) |
| O2—H2B⋯N1i | 0.82 (3) | 2.43 (3) | 3.197 (2) | 156 (3) |
| N2—H2⋯O2ii | 0.86 | 2.18 | 2.982 (2) | 155 |
Symmetry codes: (i)
; (ii)
.
supplementary crystallographic information
Comment
The chemistry of Schiff bases has attracted a great deal of interest in recent years. These compounds play an important role in the development of various proteins and enzymes (Kahwa et al., 1986; Santos et al., 2001). As part of our interest in the coordination chemistry of Schiff bases, we have recently synthesized the title compound and report here its crystal structure.
The title molecule crystallizes in the E conformation, with the C8—N1—N2—C9 torsion angle of 170.02 (19)°. The molecular is non-planar, there is a dihedral angle of 39.66 (11)° between the benzene ring and the pyridine ring. In the crystal structure, the lattice water molecule links with the organic compound via O—H···O, O—H···N and N—H···O hydrogen bonding.
Experimental
Nicotinohydrazide (1 mmol, 0.137 g) was dissolved in ethanol (15 ml). The mixture was stirred for several min at 351 K, then 3-bromo-4-methoxybenzaldehyde (1 mmol, 0.215 g) in ethanol (8 mm l) was added dropwise and the mixture was refluxed for 2 h. The solid product was isolated and recrystallized from methanol, colourless single crystals were obtained after 3 d.
Refinement
H atoms of water molecule are located in a difference Fourier map and refined isotropically, with O—H and H···H distances restrained to 0.85 (1) and 1.37 (2) Å, respectively. Methyl H atoms were placed in calculated positions with C—H = 0.96 Å and refined with Uiso(H) = 1.5Ueq(C). Other H atoms were placed in calculated positions with C—H = 0.93 and N—H = 0.86 Å, and refined in riding mode with Uiso(H) = 1.2Ueq(C,N).
Figures
Fig. 1.
The molecular structure of the title compound. Displacement ellipsoids are drawn at the 30% probability level.
Crystal data
| C14H12BrN3O2·H2O | F(000) = 712 |
| Mr = 352.18 | Dx = 1.611 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 4706 reflections |
| a = 7.7979 (1) Å | θ = 3.1–27.0° |
| b = 12.5678 (2) Å | µ = 2.85 mm−1 |
| c = 14.9419 (3) Å | T = 296 K |
| β = 97.449 (1)° | Block, colourless |
| V = 1451.98 (4) Å3 | 0.43 × 0.28 × 0.22 mm |
| Z = 4 |
Data collection
| Bruker SMART CCD area-detector diffractometer | 3149 independent reflections |
| Radiation source: fine-focus sealed tube | 2525 reflections with I > 2σ(I) |
| graphite | Rint = 0.027 |
| ω scans | θmax = 27.0°, θmin = 3.1° |
| Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −9→9 |
| Tmin = 0.400, Tmax = 0.535 | k = −16→16 |
| 12611 measured reflections | l = −19→16 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.069 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.01 | w = 1/[σ2(Fo2) + (0.0354P)2 + 0.4288P] where P = (Fo2 + 2Fc2)/3 |
| 3149 reflections | (Δ/σ)max < 0.001 |
| 198 parameters | Δρmax = 0.41 e Å−3 |
| 2 restraints | Δρmin = −0.29 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Br1 | 0.38290 (3) | 0.882695 (16) | 0.139661 (15) | 0.04825 (10) | |
| O1 | −0.0836 (2) | 0.53946 (11) | −0.37189 (9) | 0.0481 (4) | |
| N1 | 0.0118 (2) | 0.66340 (13) | −0.22564 (10) | 0.0364 (4) | |
| C2 | 0.2856 (2) | 0.77093 (14) | 0.06618 (12) | 0.0319 (4) | |
| C6 | 0.1504 (3) | 0.70831 (15) | −0.07779 (12) | 0.0330 (4) | |
| N2 | −0.0635 (2) | 0.70309 (13) | −0.30777 (10) | 0.0373 (4) | |
| H2 | −0.0792 | 0.7704 | −0.3150 | 0.045* | |
| C5 | 0.1501 (3) | 0.60611 (15) | −0.04249 (14) | 0.0389 (5) | |
| H5A | 0.1064 | 0.5501 | −0.0792 | 0.047* | |
| O | 0.3473 (2) | 0.65767 (12) | 0.19064 (9) | 0.0467 (4) | |
| N3 | −0.2839 (3) | 0.66239 (14) | −0.61976 (11) | 0.0445 (4) | |
| C13 | −0.3787 (3) | 0.81441 (17) | −0.54493 (14) | 0.0416 (5) | |
| H13A | −0.4406 | 0.8779 | −0.5484 | 0.050* | |
| C1 | 0.2194 (3) | 0.79090 (15) | −0.02219 (12) | 0.0344 (4) | |
| H1A | 0.2207 | 0.8598 | −0.0448 | 0.041* | |
| C14 | −0.2933 (3) | 0.78026 (16) | −0.46379 (13) | 0.0373 (4) | |
| H14A | −0.2956 | 0.8207 | −0.4118 | 0.045* | |
| C12 | −0.3718 (3) | 0.75404 (18) | −0.62074 (13) | 0.0438 (5) | |
| H12A | −0.4306 | 0.7777 | −0.6752 | 0.053* | |
| C11 | −0.2044 (3) | 0.62932 (16) | −0.54085 (13) | 0.0386 (5) | |
| H11A | −0.1453 | 0.5649 | −0.5392 | 0.046* | |
| C10 | −0.2041 (2) | 0.68508 (15) | −0.46049 (12) | 0.0313 (4) | |
| C3 | 0.2824 (3) | 0.66925 (15) | 0.10238 (12) | 0.0336 (4) | |
| C4 | 0.2141 (3) | 0.58670 (16) | 0.04669 (13) | 0.0386 (5) | |
| H4A | 0.2116 | 0.5180 | 0.0696 | 0.046* | |
| C8 | 0.0758 (3) | 0.73423 (16) | −0.17017 (13) | 0.0373 (4) | |
| H8A | 0.0751 | 0.8048 | −0.1890 | 0.045* | |
| C7 | 0.3529 (4) | 0.55397 (18) | 0.22835 (15) | 0.0573 (7) | |
| H7A | 0.4014 | 0.5573 | 0.2907 | 0.086* | |
| H7B | 0.4233 | 0.5089 | 0.1962 | 0.086* | |
| H7C | 0.2379 | 0.5255 | 0.2237 | 0.086* | |
| C9 | −0.1121 (3) | 0.63517 (15) | −0.37660 (12) | 0.0332 (4) | |
| O2 | −0.1669 (3) | 0.57231 (13) | −0.77890 (10) | 0.0521 (4) | |
| H2A | −0.214 (3) | 0.5932 (19) | −0.7336 (13) | 0.068 (9)* | |
| H2B | −0.110 (3) | 0.519 (2) | −0.7634 (19) | 0.072 (9)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Br1 | 0.06384 (18) | 0.03325 (12) | 0.04243 (13) | −0.00024 (10) | −0.01295 (10) | −0.01048 (9) |
| O1 | 0.0686 (11) | 0.0340 (8) | 0.0379 (8) | 0.0075 (7) | −0.0074 (7) | −0.0026 (6) |
| N1 | 0.0453 (10) | 0.0359 (8) | 0.0259 (8) | 0.0031 (8) | −0.0035 (7) | 0.0004 (7) |
| C2 | 0.0353 (11) | 0.0284 (9) | 0.0298 (9) | −0.0003 (8) | −0.0036 (8) | −0.0066 (7) |
| C6 | 0.0352 (11) | 0.0358 (10) | 0.0265 (9) | 0.0022 (8) | −0.0014 (8) | −0.0018 (8) |
| N2 | 0.0513 (11) | 0.0315 (8) | 0.0260 (8) | 0.0006 (7) | −0.0065 (7) | 0.0007 (6) |
| C5 | 0.0460 (13) | 0.0336 (10) | 0.0345 (10) | −0.0031 (9) | −0.0050 (9) | −0.0054 (8) |
| O | 0.0678 (11) | 0.0386 (8) | 0.0292 (7) | 0.0033 (7) | −0.0105 (7) | 0.0033 (6) |
| N3 | 0.0600 (12) | 0.0418 (10) | 0.0293 (8) | −0.0012 (9) | −0.0031 (8) | −0.0037 (7) |
| C13 | 0.0437 (13) | 0.0374 (10) | 0.0419 (11) | 0.0047 (9) | −0.0008 (9) | 0.0031 (9) |
| C1 | 0.0391 (12) | 0.0299 (9) | 0.0323 (9) | 0.0027 (8) | −0.0020 (8) | 0.0009 (8) |
| C14 | 0.0414 (12) | 0.0377 (10) | 0.0322 (10) | −0.0007 (9) | 0.0021 (8) | −0.0052 (8) |
| C12 | 0.0507 (14) | 0.0457 (12) | 0.0318 (10) | −0.0048 (10) | −0.0074 (9) | 0.0049 (9) |
| C11 | 0.0499 (13) | 0.0342 (10) | 0.0300 (10) | −0.0010 (9) | −0.0011 (9) | −0.0027 (8) |
| C10 | 0.0328 (11) | 0.0329 (9) | 0.0270 (9) | −0.0053 (8) | −0.0003 (8) | −0.0013 (7) |
| C3 | 0.0371 (11) | 0.0350 (10) | 0.0270 (9) | 0.0045 (9) | −0.0022 (8) | 0.0004 (8) |
| C4 | 0.0500 (13) | 0.0282 (9) | 0.0353 (10) | −0.0017 (9) | −0.0028 (9) | 0.0032 (8) |
| C8 | 0.0429 (12) | 0.0372 (10) | 0.0299 (9) | 0.0001 (9) | −0.0020 (8) | 0.0005 (8) |
| C7 | 0.0838 (19) | 0.0451 (13) | 0.0387 (12) | 0.0038 (12) | −0.0086 (11) | 0.0144 (10) |
| C9 | 0.0384 (11) | 0.0335 (10) | 0.0270 (9) | −0.0006 (8) | 0.0016 (8) | −0.0018 (7) |
| O2 | 0.0845 (13) | 0.0375 (8) | 0.0337 (8) | 0.0076 (9) | 0.0059 (8) | 0.0042 (7) |
Geometric parameters (Å, °)
| Br1—C2 | 1.8810 (17) | C13—C14 | 1.374 (3) |
| O1—C9 | 1.224 (2) | C13—H13A | 0.9300 |
| N1—C8 | 1.273 (2) | C1—H1A | 0.9300 |
| N1—N2 | 1.383 (2) | C14—C10 | 1.382 (3) |
| C2—C1 | 1.377 (2) | C14—H14A | 0.9300 |
| C2—C3 | 1.389 (3) | C12—H12A | 0.9300 |
| C6—C5 | 1.389 (3) | C11—C10 | 1.390 (3) |
| C6—C1 | 1.393 (3) | C11—H11A | 0.9300 |
| C6—C8 | 1.463 (3) | C10—C9 | 1.499 (3) |
| N2—C9 | 1.352 (2) | C3—C4 | 1.392 (3) |
| N2—H2 | 0.8600 | C4—H4A | 0.9300 |
| C5—C4 | 1.383 (3) | C8—H8A | 0.9300 |
| C5—H5A | 0.9300 | C7—H7A | 0.9600 |
| O—C3 | 1.358 (2) | C7—H7B | 0.9600 |
| O—C7 | 1.418 (3) | C7—H7C | 0.9600 |
| N3—C11 | 1.326 (3) | O2—H2A | 0.85 (2) |
| N3—C12 | 1.340 (3) | O2—H2B | 0.82 (3) |
| C13—C12 | 1.370 (3) | ||
| C8—N1—N2 | 114.26 (16) | C13—C12—H12A | 118.6 |
| C1—C2—C3 | 121.17 (17) | N3—C11—C10 | 123.96 (19) |
| C1—C2—Br1 | 119.76 (14) | N3—C11—H11A | 118.0 |
| C3—C2—Br1 | 119.07 (13) | C10—C11—H11A | 118.0 |
| C5—C6—C1 | 118.83 (17) | C14—C10—C11 | 117.46 (18) |
| C5—C6—C8 | 122.96 (17) | C14—C10—C9 | 125.20 (17) |
| C1—C6—C8 | 118.18 (17) | C11—C10—C9 | 117.30 (17) |
| C9—N2—N1 | 119.48 (16) | O—C3—C2 | 116.98 (17) |
| C9—N2—H2 | 120.3 | O—C3—C4 | 124.49 (17) |
| N1—N2—H2 | 120.3 | C2—C3—C4 | 118.54 (17) |
| C4—C5—C6 | 120.74 (18) | C5—C4—C3 | 120.46 (18) |
| C4—C5—H5A | 119.6 | C5—C4—H4A | 119.8 |
| C6—C5—H5A | 119.6 | C3—C4—H4A | 119.8 |
| C3—O—C7 | 118.23 (16) | N1—C8—C6 | 122.20 (18) |
| C11—N3—C12 | 117.32 (17) | N1—C8—H8A | 118.9 |
| C12—C13—C14 | 119.3 (2) | C6—C8—H8A | 118.9 |
| C12—C13—H13A | 120.3 | O—C7—H7A | 109.5 |
| C14—C13—H13A | 120.3 | O—C7—H7B | 109.5 |
| C2—C1—C6 | 120.25 (17) | H7A—C7—H7B | 109.5 |
| C2—C1—H1A | 119.9 | O—C7—H7C | 109.5 |
| C6—C1—H1A | 119.9 | H7A—C7—H7C | 109.5 |
| C13—C14—C10 | 119.09 (19) | H7B—C7—H7C | 109.5 |
| C13—C14—H14A | 120.5 | O1—C9—N2 | 123.08 (18) |
| C10—C14—H14A | 120.5 | O1—C9—C10 | 121.55 (17) |
| N3—C12—C13 | 122.83 (19) | N2—C9—C10 | 115.38 (16) |
| N3—C12—H12A | 118.6 | H2A—O2—H2B | 107 (2) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O2—H2A···N3 | 0.85 (2) | 2.05 (2) | 2.886 (2) | 168 (2) |
| O2—H2B···O1i | 0.82 (3) | 2.47 (3) | 3.118 (2) | 136 (2) |
| O2—H2B···N1i | 0.82 (3) | 2.43 (3) | 3.197 (2) | 156 (3) |
| N2—H2···O2ii | 0.86 | 2.18 | 2.982 (2) | 155 |
Symmetry codes: (i) −x, −y+1, −z−1; (ii) x, −y+1/2, z−1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU2597).
References
- Bruker (1998). SMART, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
- Kahwa, I. A., Selbin, I., Hsieh, T. C. Y. & Laine, R. A. (1986). Inorg. Chim. Acta, 118, 179–185.
- Santos, M. L. P., Bagatin, I. A., Pereira, E. M. & Ferreira, A. M. D. C. (2001). J. Chem. Soc. Dalton Trans pp. 838–844.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680903400X/xu2597sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S160053680903400X/xu2597Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

